E3 ubiquitin-protein ligase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UBA_ARI1 | PF21235 | 80 - 119 | 3.2e-10 | E3 ubiquitin-protein ligase ARIH1, UBA-like domain |
| IBR | PF01485 | 219 - 282 | 1.7e-16 | IBR domain, a half RING-finger domain |
| IBR_1 | PF22191 | 305 - 346 | 2.3e-11 | IBR domain |
| IBR_2 | PF22605 | 305 - 344 | 2.4e-09 | IBR domain |
| Ariadne | PF19422 | 382 - 530 | 4.6e-06 | Ariadne domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 746 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 104 |
| Acc16I | TGCGCA | 2 cut(s) | 897, 982 |
| Acc36I | ACCTGC | 3 cut(s) | 746, 984, 1312 |
| AccB1I | GGYRCC | 1 cut(s) | 714 |
| AciI | CCGC | 6 cut(s) | 294, 441, 498, 608, 1248, 1300 |
| AclI | AACGTT | 1 cut(s) | 76 |
| AclWI | GGATC | 1 cut(s) | 478 |
| AcsI | RAATTY | 4 cut(s) | 116, 746, 825, 1001 |
| AcuI | CTGAAG | 2 cut(s) | 1256, 1397 |
| AfaI | GTAC | 6 cut(s) | 178, 668, 737, 797, 1352, 1397 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 244, 513, 724, 1096 |
| AgsI | TTSAA | 7 cut(s) | 83, 220, 322, 692, 751, 1103, 1313 |
| AjnI | CCWGG | 1 cut(s) | 1422 |
| AleI | CACNNNNGTG | 1 cut(s) | 1440 |
| AluBI | AGCT | 7 cut(s) | 771, 1106, 1243, 1270, 1276, 1516, 1558 |
| AluI | AGCT | 7 cut(s) | 771, 1106, 1243, 1270, 1276, 1516, 1558 |
| Alw26I | GTCTC | 1 cut(s) | 192 |
| AlwI | GGATC | 1 cut(s) | 478 |
| Ama87I | CYCGRG | 2 cut(s) | 1019, 1361 |
| AoxI | GGCC | 1 cut(s) | 1405 |
| ApeKI | GCWGC | 3 cut(s) | 296, 605, 1044 |
| ApoI | RAATTY | 4 cut(s) | 116, 746, 825, 1001 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 357, 389, 1166, 1198 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 231 |
| AspLEI | GCGC | 3 cut(s) | 699, 898, 983 |
| AspS9I | GGNCC | 3 cut(s) | 557, 614, 1481 |
| AsuC2I | CCSGG | 2 cut(s) | 1091, 1499 |
| AsuHPI | GGTGA | 3 cut(s) | 38, 821, 1546 |
| AsuII | TTCGAA | 2 cut(s) | 869, 1187 |
| AvaI | CYCGRG | 2 cut(s) | 1019, 1361 |
| AvaII | GGWCC | 3 cut(s) | 557, 614, 1481 |
| BaeGI | GKGCMC | 1 cut(s) | 719 |
| BanI | GGYRCC | 1 cut(s) | 714 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 653, 685 |
| BbsI | GAAGAC | 4 cut(s) | 102, 141, 258, 1176 |
| BbvI | GCAGC | 3 cut(s) | 283, 617, 1031 |
| BccI | CCATC | 4 cut(s) | 426, 565, 1161, 1326 |
| BciT130I | CCWGG | 1 cut(s) | 1424 |
| BciVI | GTATCC | 1 cut(s) | 897 |
| BclI | TGATCA | 1 cut(s) | 457 |
| BcnI | CCSGG | 2 cut(s) | 1091, 1499 |
| BcoDI | GTCTC | 1 cut(s) | 192 |
| BfmI | CTRYAG | 1 cut(s) | 242 |
| BfuAI | ACCTGC | 3 cut(s) | 746, 984, 1312 |
| BfuI | GTATCC | 1 cut(s) | 897 |
| BglII | AGATCT | 1 cut(s) | 680 |
| BisI | GCNGC | 5 cut(s) | 297, 606, 1045, 1248, 1301 |
| BlsI | GCNGC | 5 cut(s) | 298, 607, 1046, 1249, 1302 |
| BmcAI | AGTACT | 3 cut(s) | 178, 668, 1397 |
| Bme1390I | CCNGG | 3 cut(s) | 1091, 1424, 1499 |
| Bme18I | GGWCC | 3 cut(s) | 557, 614, 1481 |
| BmeT110I | CYCGRG | 2 cut(s) | 1019, 1361 |
| BmgT120I | GGNCC | 3 cut(s) | 557, 614, 1481 |
| BmiI | GGNNCC | 3 cut(s) | 558, 716, 763 |
| BmrFI | CCNGG | 3 cut(s) | 1091, 1424, 1499 |
| BpiI | GAAGAC | 4 cut(s) | 102, 141, 258, 1176 |
| BpmI | CTGGAG | 2 cut(s) | 346, 1445 |
| Bpu14I | TTCGAA | 2 cut(s) | 869, 1187 |
| BpuEI | CTTGAG | 1 cut(s) | 1262 |
| BpuMI | CCSGG | 2 cut(s) | 1091, 1499 |
| BsaAI | YACGTR | 1 cut(s) | 1138 |
| BsaBI | GATNNNNATC | 1 cut(s) | 459 |
| BsaJI | CCNNGG | 1 cut(s) | 405 |
| BsaWI | WCCGGW | 3 cut(s) | 18, 616, 724 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 695, 725 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 244, 513, 724, 1096 |
| Bse1I | ACTGG | 2 cut(s) | 329, 1036 |
| Bse3DI | GCAATG | 2 cut(s) | 823, 1054 |
| Bse8I | GATNNNNATC | 1 cut(s) | 459 |
| BseBI | CCWGG | 1 cut(s) | 1424 |
| BseDI | CCNNGG | 1 cut(s) | 405 |
| BseGI | GGATG | 3 cut(s) | 418, 484, 502 |
| BseJI | GATNNNNATC | 1 cut(s) | 459 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 244, 513, 724, 1096 |
| BseMI | GCAATG | 2 cut(s) | 823, 1054 |
| BseMII | CTCAG | 2 cut(s) | 569, 1437 |
| BseNI | ACTGG | 2 cut(s) | 329, 1036 |
| BseRI | GAGGAG | 2 cut(s) | 299, 362 |
| BseSI | GKGCMC | 1 cut(s) | 719 |
| BseXI | GCAGC | 3 cut(s) | 283, 617, 1031 |
| BseYI | CCCAGC | 1 cut(s) | 1106 |
| BsgI | GTGCAG | 2 cut(s) | 705, 1241 |
| BshFI | GGCC | 1 cut(s) | 1407 |
| BshNI | GGYRCC | 1 cut(s) | 714 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1019, 1361 |
| BsiSI | CCGG | 6 cut(s) | 19, 560, 617, 725, 1091, 1498 |
| BslFI | GGGAC | 2 cut(s) | 570, 1514 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 244, 513, 724, 1096 |
| BsmAI | GTCTC | 1 cut(s) | 192 |
| BsmBI | CGTCTC | 1 cut(s) | 192 |
| BsmFI | GGGAC | 2 cut(s) | 570, 1514 |
| BsmI | GAATGC | 1 cut(s) | 898 |
| BsnI | GGCC | 1 cut(s) | 1407 |
| BsoBI | CYCGRG | 2 cut(s) | 1019, 1361 |
| Bsp119I | TTCGAA | 2 cut(s) | 869, 1187 |
| Bsp1286I | GDGCHC | 1 cut(s) | 719 |
| Bsp143I | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| BspACI | CCGC | 6 cut(s) | 294, 441, 498, 608, 1248, 1300 |
| BspANI | GGCC | 1 cut(s) | 1407 |
| BspCNI | CTCAG | 2 cut(s) | 570, 1438 |
| BspHI | TCATGA | 1 cut(s) | 652 |
| BspLI | GGNNCC | 3 cut(s) | 558, 716, 763 |
| BspMAI | CTGCAG | 1 cut(s) | 246 |
| BspMI | ACCTGC | 3 cut(s) | 746, 984, 1312 |
| BspPI | GGATC | 1 cut(s) | 478 |
| BspT104I | TTCGAA | 2 cut(s) | 869, 1187 |
| BspT107I | GGYRCC | 1 cut(s) | 714 |
| BsrDI | GCAATG | 2 cut(s) | 823, 1054 |
| BsrI | ACTGG | 2 cut(s) | 329, 1036 |
| BssECI | CCNNGG | 1 cut(s) | 405 |
| BssMI | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| Bst2UI | CCWGG | 1 cut(s) | 1424 |
| Bst4CI | ACNGT | 5 cut(s) | 26, 265, 594, 833, 853 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1327 |
| BstBAI | YACGTR | 1 cut(s) | 1138 |
| BstBI | TTCGAA | 2 cut(s) | 869, 1187 |
| BstC8I | GCNNGC | 2 cut(s) | 301, 1245 |
| BstDEI | CTNAG | 2 cut(s) | 578, 1446 |
| BstDSI | CCRYGG | 1 cut(s) | 405 |
| BstF5I | GGATG | 3 cut(s) | 418, 484, 502 |
| BstHHI | GCGC | 3 cut(s) | 699, 898, 983 |
| BstKTI | GATC | 9 cut(s) | 67, 157, 460, 473, 652, 683, 708, 1308, 1582 |
| BstMAI | GTCTC | 1 cut(s) | 192 |
| BstMBI | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 813, 933, 1014, 1327 |
| BstNI | CCWGG | 1 cut(s) | 1424 |
| BstNSI | RCATGY | 2 cut(s) | 303, 1044 |
| BstSCI | CCNGG | 3 cut(s) | 1089, 1422, 1497 |
| BstSFI | CTRYAG | 1 cut(s) | 242 |
| BstSLI | GKGCMC | 1 cut(s) | 719 |
| BstV1I | GCAGC | 3 cut(s) | 283, 617, 1031 |
| BstV2I | GAAGAC | 4 cut(s) | 102, 141, 258, 1176 |
| BstX2I | RGATCY | 1 cut(s) | 680 |
| BstYI | RGATCY | 1 cut(s) | 680 |
| BsuI | GTATCC | 1 cut(s) | 897 |
| BsuRI | GGCC | 1 cut(s) | 1407 |
| BtgI | CCRYGG | 1 cut(s) | 405 |
| BtgZI | GCGATG | 2 cut(s) | 66, 1345 |
| BtsCI | GGATG | 3 cut(s) | 418, 484, 502 |
| BtsI | GCAGTG | 1 cut(s) | 905 |
| BtsIMutI | CAGTG | 1 cut(s) | 905 |
| BveI | ACCTGC | 3 cut(s) | 746, 984, 1312 |
| Cac8I | GCNNGC | 2 cut(s) | 301, 1245 |
| CciI | TCATGA | 1 cut(s) | 652 |
| CfoI | GCGC | 3 cut(s) | 699, 898, 983 |
| Cfr13I | GGNCC | 3 cut(s) | 557, 614, 1481 |
| CseI | GACGC | 2 cut(s) | 110, 319 |
| Csp6I | GTAC | 6 cut(s) | 177, 667, 736, 796, 1351, 1396 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 739, 774 |
| CviAII | CATG | 3 cut(s) | 300, 653, 1041 |
| CviQI | GTAC | 6 cut(s) | 177, 667, 736, 796, 1351, 1396 |
| DdeI | CTNAG | 2 cut(s) | 578, 1446 |
| DpnI | GATC | 9 cut(s) | 66, 156, 459, 472, 651, 682, 707, 1307, 1581 |
| DpnII | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 104 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 104 |
| Eco47I | GGWCC | 3 cut(s) | 557, 614, 1481 |
| Eco57I | CTGAAG | 2 cut(s) | 1256, 1397 |
| Eco88I | CYCGRG | 2 cut(s) | 1019, 1361 |
| EcoRII | CCWGG | 1 cut(s) | 1422 |
| EcoT22I | ATGCAT | 1 cut(s) | 1345 |
| Esp3I | CGTCTC | 1 cut(s) | 192 |
| FaeI | CATG | 3 cut(s) | 303, 656, 1044 |
| FaqI | GGGAC | 2 cut(s) | 570, 1514 |
| FatI | CATG | 3 cut(s) | 299, 652, 1040 |
| FauNDI | CATATG | 1 cut(s) | 972 |
| FbaI | TGATCA | 1 cut(s) | 457 |
| Fnu4HI | GCNGC | 5 cut(s) | 297, 606, 1045, 1248, 1301 |
| FokI | GGATG | 3 cut(s) | 405, 489, 491 |
| Fsp4HI | GCNGC | 5 cut(s) | 297, 606, 1045, 1248, 1301 |
| FspI | TGCGCA | 2 cut(s) | 897, 982 |
| GlaI | GCGC | 3 cut(s) | 698, 897, 982 |
| GluI | GCNGC | 5 cut(s) | 297, 606, 1045, 1248, 1301 |
| GsaI | CCCAGC | 1 cut(s) | 1110 |
| GsuI | CTGGAG | 2 cut(s) | 346, 1445 |
| HaeIII | GGCC | 1 cut(s) | 1407 |
| HapII | CCGG | 6 cut(s) | 19, 560, 617, 725, 1091, 1498 |
| HgaI | GACGC | 2 cut(s) | 110, 319 |
| HhaI | GCGC | 3 cut(s) | 699, 898, 983 |
| Hin1II | CATG | 3 cut(s) | 303, 656, 1044 |
| Hin6I | GCGC | 3 cut(s) | 697, 896, 981 |
| HinP1I | GCGC | 3 cut(s) | 697, 896, 981 |
| HincII | GTYRAC | 1 cut(s) | 343 |
| HindII | GTYRAC | 1 cut(s) | 343 |
| HindIII | AAGCTT | 1 cut(s) | 1241 |
| HinfI | GANTC | 6 cut(s) | 59, 182, 372, 884, 1381, 1606 |
| HpaII | CCGG | 6 cut(s) | 19, 560, 617, 725, 1091, 1498 |
| HphI | GGTGA | 3 cut(s) | 38, 821, 1546 |
| Hpy166II | GTNNAC | 2 cut(s) | 343, 841 |
| Hpy188I | TCNGA | 5 cut(s) | 64, 73, 377, 1267, 1588 |
| Hpy188III | TCNNGA | 7 cut(s) | 515, 587, 653, 949, 1021, 1361, 1617 |
| Hpy8I | GTNNAC | 2 cut(s) | 343, 841 |
| Hpy99I | CGWCG | 3 cut(s) | 104, 335, 365 |
| HpyAV | CCTTC | 1 cut(s) | 686 |
| HpyCH4III | ACNGT | 5 cut(s) | 26, 265, 594, 833, 853 |
| HpyCH4IV | ACGT | 5 cut(s) | 76, 687, 777, 1137, 1337 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 813, 933, 1014, 1327 |
| HpyF3I | CTNAG | 2 cut(s) | 578, 1446 |
| HpySE526I | ACGT | 5 cut(s) | 76, 687, 777, 1137, 1337 |
| Hsp92II | CATG | 3 cut(s) | 303, 656, 1044 |
| HspAI | GCGC | 3 cut(s) | 697, 896, 981 |
| Ksp22I | TGATCA | 1 cut(s) | 457 |
| Kzo9I | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| LmnI | GCTCC | 2 cut(s) | 327, 1267 |
| Lsp1109I | GCAGC | 3 cut(s) | 283, 617, 1031 |
| MaeII | ACGT | 5 cut(s) | 76, 687, 777, 1137, 1337 |
| MaeIII | GTNAC | 2 cut(s) | 26, 1534 |
| MalI | GATC | 9 cut(s) | 66, 156, 459, 472, 651, 682, 707, 1307, 1581 |
| MboI | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| MflI | RGATCY | 1 cut(s) | 680 |
| MhlI | GDGCHC | 1 cut(s) | 719 |
| MluCI | AATT | 9 cut(s) | 116, 205, 746, 811, 825, 859, 1001, 1024, 1589 |
| MlyI | GAGTC | 2 cut(s) | 381, 878 |
| MmeI | TCCRAC | 3 cut(s) | 592, 1467, 1551 |
| Mph1103I | ATGCAT | 1 cut(s) | 1345 |
| MroXI | GAANNNNTTC | 1 cut(s) | 231 |
| MseI | TTAA | 2 cut(s) | 537, 623 |
| MslI | CAYNNNNRTG | 3 cut(s) | 465, 1158, 1440 |
| MspA1I | CMGCKG | 2 cut(s) | 296, 608 |
| MspI | CCGG | 6 cut(s) | 19, 560, 617, 725, 1091, 1498 |
| MspR9I | CCNGG | 3 cut(s) | 1091, 1424, 1499 |
| Mva1269I | GAATGC | 1 cut(s) | 898 |
| MvaI | CCWGG | 1 cut(s) | 1424 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 813, 933, 1014, 1327 |
| NciI | CCSGG | 2 cut(s) | 1091, 1499 |
| NdeI | CATATG | 1 cut(s) | 972 |
| NdeII | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| NlaIII | CATG | 3 cut(s) | 303, 656, 1044 |
| NlaIV | GGNNCC | 3 cut(s) | 558, 716, 763 |
| NmuCI | GTSAC | 2 cut(s) | 26, 1534 |
| NsbI | TGCGCA | 2 cut(s) | 897, 982 |
| NsiI | ATGCAT | 1 cut(s) | 1345 |
| NspI | RCATGY | 2 cut(s) | 303, 1044 |
| NspV | TTCGAA | 2 cut(s) | 869, 1187 |
| OliI | CACNNNNGTG | 1 cut(s) | 1440 |
| PaeI | GCATGC | 1 cut(s) | 303 |
| PaeR7I | CTCGAG | 1 cut(s) | 1019 |
| PagI | TCATGA | 1 cut(s) | 652 |
| PaqCI | CACCTGC | 1 cut(s) | 746 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 105, 150, 168 |
| PctI | GAATGC | 1 cut(s) | 898 |
| PdmI | GAANNNNTTC | 1 cut(s) | 231 |
| PfeI | GAWTC | 4 cut(s) | 59, 182, 1381, 1606 |
| PflFI | GACNNNGTC | 1 cut(s) | 104 |
| PfoI | TCCNGGA | 1 cut(s) | 1497 |
| PkrI | GCNGC | 5 cut(s) | 298, 607, 1046, 1249, 1302 |
| PleI | GAGTC | 2 cut(s) | 380, 878 |
| PpsI | GAGTC | 2 cut(s) | 380, 878 |
| Ppu21I | YACGTR | 1 cut(s) | 1138 |
| Psp1406I | AACGTT | 1 cut(s) | 76 |
| Psp6I | CCWGG | 1 cut(s) | 1422 |
| PspFI | CCCAGC | 1 cut(s) | 1106 |
| PspGI | CCWGG | 1 cut(s) | 1422 |
| PspN4I | GGNNCC | 3 cut(s) | 558, 716, 763 |
| PspPI | GGNCC | 3 cut(s) | 557, 614, 1481 |
| PstI | CTGCAG | 1 cut(s) | 246 |
| PsuI | RGATCY | 1 cut(s) | 680 |
| PsyI | GACNNNGTC | 1 cut(s) | 104 |
| RsaI | GTAC | 6 cut(s) | 178, 668, 737, 797, 1352, 1397 |
| RsaNI | GTAC | 6 cut(s) | 177, 667, 736, 796, 1351, 1396 |
| RseI | CAYNNNNRTG | 3 cut(s) | 465, 1158, 1440 |
| SaqAI | TTAA | 2 cut(s) | 537, 623 |
| SatI | GCNGC | 5 cut(s) | 297, 606, 1045, 1248, 1301 |
| Sau3AI | GATC | 9 cut(s) | 64, 154, 457, 470, 649, 680, 705, 1305, 1579 |
| Sau96I | GGNCC | 3 cut(s) | 557, 614, 1481 |
| ScaI | AGTACT | 3 cut(s) | 178, 668, 1397 |
| SchI | GAGTC | 2 cut(s) | 381, 878 |
| ScrFI | CCNGG | 3 cut(s) | 1091, 1424, 1499 |
| SduI | GDGCHC | 1 cut(s) | 719 |
| SfcI | CTRYAG | 1 cut(s) | 242 |
| Sfr274I | CTCGAG | 1 cut(s) | 1019 |
| SfuI | TTCGAA | 2 cut(s) | 869, 1187 |
| SinI | GGWCC | 3 cut(s) | 557, 614, 1481 |
| SlaI | CTCGAG | 1 cut(s) | 1019 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 465, 1158, 1440 |
| SmlI | CTYRAG | 2 cut(s) | 1019, 1277 |
| SmoI | CTYRAG | 2 cut(s) | 1019, 1277 |
| SphI | GCATGC | 1 cut(s) | 303 |
| Sse9I | AATT | 9 cut(s) | 116, 205, 746, 811, 825, 859, 1001, 1024, 1589 |
| SsiI | CCGC | 6 cut(s) | 294, 441, 498, 608, 1248, 1300 |
| StyD4I | CCNGG | 3 cut(s) | 1089, 1422, 1497 |
| TaaI | ACNGT | 5 cut(s) | 26, 265, 594, 833, 853 |
| TaiI | ACGT | 5 cut(s) | 79, 690, 780, 1140, 1340 |
| TaqI | TCGA | 9 cut(s) | 108, 144, 627, 869, 887, 948, 1020, 1187, 1392 |
| TasI | AATT | 9 cut(s) | 116, 205, 746, 811, 825, 859, 1001, 1024, 1589 |
| TatI | WGTACW | 3 cut(s) | 176, 666, 1395 |
| TauI | GCSGC | 2 cut(s) | 1250, 1303 |
| TfiI | GAWTC | 4 cut(s) | 59, 182, 1381, 1606 |
| Tru1I | TTAA | 2 cut(s) | 537, 623 |
| Tru9I | TTAA | 2 cut(s) | 537, 623 |
| TscAI | CASTG | 1 cut(s) | 905 |
| TseFI | GTSAC | 2 cut(s) | 26, 1534 |
| TseI | GCWGC | 3 cut(s) | 296, 605, 1044 |
| Tsp45I | GTSAC | 2 cut(s) | 26, 1534 |
| TspDTI | ATGAA | 8 cut(s) | 69, 129, 905, 1014, 1086, 1176, 1383, 1472 |
| TspGWI | ACGGA | 1 cut(s) | 1473 |
| TspRI | CASTG | 1 cut(s) | 905 |
| Tth111I | GACNNNGTC | 1 cut(s) | 104 |
| VpaK11BI | GGWCC | 3 cut(s) | 557, 614, 1481 |
| XapI | RAATTY | 4 cut(s) | 116, 746, 825, 1001 |
| XceI | RCATGY | 2 cut(s) | 303, 1044 |
| XhoI | CTCGAG | 1 cut(s) | 1019 |
| XmnI | GAANNNNTTC | 1 cut(s) | 231 |
| ZrmI | AGTACT | 3 cut(s) | 178, 668, 1397 |
| Zsp2I | ATGCAT | 1 cut(s) | 1345 |