Rh6BG060400

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0000864
Physical Location & Seq
Reverse (-)
9561533 .. 9563482
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG060400.1

Sequence Viewer

Length: 1776 bp
ATGGACCATATGCACCATGAGAGTGATGACGGTTATGAATCCGCAGAGAGTGGCGATGAAGAAGCAATGAACTACGATGACGATCTTCTAGTAGATGATAAAGTCGATGACTTTGGTCAGAGTAGGTCTCCACAGGAAAATTATATTGTTTTGGAAGAAGAAGAAATTGCAAAACTTCAGGATAATTATATTGCAGAAGTCTCTACCGTTCTCTCCATATCCAAATCCGATGCATGCTTACTGCTCCCTCACTTCCATTGGAGGGTTGATGAACTAAAGGATGAATGGTTTGCCAATGAAGATAAAGTTAGAGAAAAGGTAGGTTTGTTGAAGAAACCTATAGTTGAACATAATGCTAGGGCAAATCTAAGAATTCCTTGCGGAATTTGTTTTGAAGAGTACAACTATGATCGTTGTATTTTGTCTGCCTCTTGTGGCCATCCTTTTTGTCGAGATTGCTGGGCAGGTTATATTAGCACAACAATATGTGACGGTGGTCCGGCGTGTTTGAGGCTAAGGTGTCCTGAATCATCATGTAGTGCAGCAGTTGGTCCTGATTTGATCCAAAAGGTATTGTTGAACTCAAACCGAGAAGCTGAGCATGGCAAGTACAAGACCTATCTGTTAAGATCTTACGTCGAAGATCAGAGGAAGATCAAGTGGTGTCCTGCCCCGGATTGTAACTGCGCAATTCAGTTTGATACTTTGGGTGGAATGGTGTCATATGATGTTTCATGTCTTTGCTCGCATAGCTATTGCTGGAATTGTACTGAGGAGAATCATCGTCCTGTGGATTGCGAAACTGTGGGGAAGTGGATTTTGAAGAATAAGGATGATTCTCAAAATGCGCAGTGGATACTGGTTAATTCCAAGCCTTGCCCCCAGTGCAAAAGACCAATTGAGAAGAACCAAGGCTGTAATCACTTGACGTGCAGTGCTCCCTGTGGGTACCAGTTTTGCTGGTTATGCCTCGGGCCACATAAAAATTACAGAGGTTGCTATTGCAATAGTTATAGGCCGGGGTCAGTTGATAATAATCCCGGGACATCTAGGTATATGAATGAGACGGCAAGGAAGAGGGCAAAGAAGTATTTAGAGAGATATATTCATTACTATGAACGCTGGGAAAACAATGGAAGATCAAAGGGAAAAGCTATTGAGGATTTTGATAAGGTGAAGACCGAGCACATTAAGCAACTTGGCGAGATACATGTAAACACAAAAGAGCATGATTACGATTTTATCATAGAGGCCTGGCAACAGATTATTGAGTGCAGGCAAGTATTACGATGGACTTATGCATATGGCTACTACATGCCTCAGGATGCTTATGCTAAGAAGCACCTATTCGAGTGCTTGCAAGGCCATGCTGAGTTCAGCCTGGAAAGGCTTCACAATTGCGCTGAGAGCGAACTGCAACAGTTTCTGGTCTTATCACCATCAGCAGCTTCTGAAACTTTCAAAGAGTTTAAAACAAAACTCGTGGGCCTGACAAAGGTGACCGGAACTTATTTCAAAAGGTTGGTTACTGCATTGGAGGAGGGGCTTCCGGAGACGAGCCGATATGGAGCTGGGGCTGCTTATGAGGAGACTGATTGGACATGTGACCAATGTACCTATATCAATGTAGGGTCTGCCGTTACCTGTGCAGCATGTTCTGAGCAAAATCCACAAGGTTACTGGTCTTGTGACCGCTGTACGATTTTCAATCCGGTGACTACAACCAGGTGTTGGATGTGTGATGATGCCGATGCTGATCAGGTTGGGGAAGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR zf-RanBP

Protein Analysis

591

Amino Acids

67.75

Weight (kDa)

5.26

Isoelectric Point (pI)

53.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_ARIH2_N PF26000 54 - 94 1.7e-06 E3 ubiquitin-protein ligase ARIH2, N-terminal UBA domain
UBA_ARI1 PF21235 59 - 97 5.4e-09 E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR PF01485 203 - 266 1.5e-13 IBR domain, a half RING-finger domain
IBR_2 PF22605 286 - 327 2.6e-09 IBR domain
IBR_1 PF22191 289 - 328 3.7e-10 IBR domain
Ariadne PF19422 366 - 518 1.9e-07 Ariadne domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 688, 849
Acc36I ACCTGC 1 cut(s) 455
Acc65I GGTACC 1 cut(s) 948
AccB1I GGYRCC 1 cut(s) 948
AccB7I CCANNNNNTGG 1 cut(s) 1731
AccIII TCCGGA 1 cut(s) 1549
AciI CCGC 3 cut(s) 42, 381, 1693
AclWI GGATC 1 cut(s) 556
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 2 cut(s) 372, 384
AcuI CTGAAG 1 cut(s) 161
AfaI GTAC 6 cut(s) 401, 611, 769, 950, 1615, 1699
AfiI CCNNNNNNNGG 3 cut(s) 262, 1495, 1731
AflIII ACRYGT 2 cut(s) 1210, 1601
AgsI TTSAA 8 cut(s) 331, 347, 395, 580, 823, 1462, 1516, 1708
AjiI CACGTC 1 cut(s) 930
AjnI CCWGG 3 cut(s) 1253, 1380, 1724
AluBI AGCT 5 cut(s) 596, 753, 1154, 1448, 1571
AluI AGCT 5 cut(s) 596, 753, 1154, 1448, 1571
Alw21I GWGCWC 2 cut(s) 940, 1188
Alw26I GTCTC 5 cut(s) 132, 205, 1058, 1547, 1583
AlwI GGATC 1 cut(s) 556
AlwNI CAGNNNCTG 2 cut(s) 1426, 1451
Ama87I CYCGRG 2 cut(s) 971, 1040
Aor13HI TCCGGA 1 cut(s) 1549
AoxI GGCC 6 cut(s) 436, 974, 1016, 1251, 1363, 1486
ApeKI GCWGC 4 cut(s) 542, 1445, 1577, 1649
ApoI RAATTY 2 cut(s) 372, 384
Asp700I GAANNNNTTC 1 cut(s) 1389
Asp718I GGTACC 1 cut(s) 948
AspLEI GCGC 3 cut(s) 689, 850, 1403
AspS9I GGNCC 5 cut(s) 4, 497, 551, 974, 1486
AsuC2I CCSGG 4 cut(s) 674, 1020, 1041, 1042
AsuHPI GGTGA 4 cut(s) 1186, 1428, 1510, 1726
AvaI CYCGRG 2 cut(s) 971, 1040
AvaII GGWCC 3 cut(s) 4, 497, 551
AxyI CCTNAGG 1 cut(s) 1320
BaeI ACNNNNGTAYC 2 cut(s) 1597, 1630
BalI TGGCCA 1 cut(s) 438
BanI GGYRCC 1 cut(s) 948
BauI CACGAG 1 cut(s) 1481
BbsI GAAGAC 1 cut(s) 1184
Bbv12I GWGCWC 2 cut(s) 940, 1188
BbvI GCAGC 4 cut(s) 554, 1457, 1564, 1661
BccI CCATC 3 cut(s) 447, 1284, 1447
BceAI ACGGC 2 cut(s) 1083, 1622
BciT130I CCWGG 3 cut(s) 1255, 1382, 1726
BciVI GTATCC 1 cut(s) 849
BclI TGATCA 1 cut(s) 1756
BcnI CCSGG 4 cut(s) 674, 1020, 1041, 1042
BcoDI GTCTC 5 cut(s) 132, 205, 1058, 1547, 1583
BfaI CTAG 3 cut(s) 89, 357, 1050
BfmI CTRYAG 1 cut(s) 339
BfuAI ACCTGC 1 cut(s) 455
BfuI GTATCC 1 cut(s) 849
BglII AGATCT 1 cut(s) 629
BisI GCNGC 4 cut(s) 543, 1446, 1578, 1650
BlpI GCTNAGC 1 cut(s) 597
BlsI GCNGC 4 cut(s) 544, 1447, 1579, 1651
Bme1390I CCNGG 7 cut(s) 674, 1020, 1041, 1042, 1255, 1382, 1726
Bme18I GGWCC 3 cut(s) 4, 497, 551
BmeT110I CYCGRG 2 cut(s) 971, 1040
BmgBI CACGTC 1 cut(s) 930
BmgT120I GGNCC 5 cut(s) 4, 497, 551, 974, 1486
BmiI GGNNCC 1 cut(s) 950
BmrFI CCNGG 7 cut(s) 674, 1020, 1041, 1042, 1255, 1382, 1726
BmrI ACTGGG 1 cut(s) 877
BmsI GCATC 4 cut(s) 220, 1315, 1735, 1741
BmuI ACTGGG 1 cut(s) 877
BoxI GACNNNNGTC 2 cut(s) 114, 495
BpiI GAAGAC 1 cut(s) 1184
BplI GAGNNNNNCTC 2 cut(s) 112, 144
Bpu10I CCTNAGC 1 cut(s) 515
Bpu1102I GCTNAGC 1 cut(s) 597
BpuMI CCSGG 4 cut(s) 674, 1020, 1041, 1042
BsaBI GATNNNNATC 3 cut(s) 81, 1035, 1755
BsaI GGTCTC 1 cut(s) 132
BsaJI CCNNGG 5 cut(s) 672, 910, 970, 1019, 1040
BsaWI WCCGGW 3 cut(s) 1502, 1549, 1711
Bsc4I CCNNNNNNNGG 3 cut(s) 262, 1495, 1731
Bse1I ACTGG 4 cut(s) 864, 883, 952, 1685
Bse21I CCTNAGG 1 cut(s) 1320
Bse3DI GCAATG 1 cut(s) 72
Bse8I GATNNNNATC 3 cut(s) 81, 1035, 1755
BseAI TCCGGA 1 cut(s) 1549
BseBI CCWGG 3 cut(s) 1255, 1382, 1726
BseDI CCNNGG 5 cut(s) 672, 910, 970, 1019, 1040
BseGI GGATG 5 cut(s) 286, 439, 838, 1330, 1740
BseJI GATNNNNATC 3 cut(s) 81, 1035, 1755
BseLI CCNNNNNNNGG 3 cut(s) 262, 1495, 1731
BseMI GCAATG 1 cut(s) 72
BseMII CTCAG 6 cut(s) 588, 762, 1334, 1362, 1395, 1650
BseNI ACTGG 4 cut(s) 864, 883, 952, 1685
BseRI GAGGAG 3 cut(s) 788, 1553, 1601
BseXI GCAGC 4 cut(s) 554, 1457, 1564, 1661
BseYI CCCAGC 3 cut(s) 459, 1122, 1571
BsgI GTGCAG 4 cut(s) 561, 952, 1294, 1668
BshFI GGCC 6 cut(s) 438, 976, 1018, 1253, 1365, 1488
BshNI GGYRCC 1 cut(s) 948
BsiHKAI GWGCWC 2 cut(s) 940, 1188
BsiHKCI CYCGRG 2 cut(s) 971, 1040
BsiSI CCGG 7 cut(s) 500, 674, 1019, 1041, 1503, 1550, 1712
BslFI GGGAC 1 cut(s) 1057
BslI CCNNNNNNNGG 3 cut(s) 262, 1495, 1731
BsmAI GTCTC 5 cut(s) 132, 205, 1058, 1547, 1583
BsmBI CGTCTC 2 cut(s) 1058, 1547
BsmFI GGGAC 1 cut(s) 1057
BsnI GGCC 6 cut(s) 438, 976, 1018, 1253, 1365, 1488
Bso31I GGTCTC 1 cut(s) 132
BsoBI CYCGRG 2 cut(s) 971, 1040
Bsp1286I GDGCHC 2 cut(s) 940, 1188
Bsp13I TCCGGA 1 cut(s) 1549
Bsp143I GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
Bsp1720I GCTNAGC 1 cut(s) 597
BspACI CCGC 3 cut(s) 42, 381, 1693
BspANI GGCC 6 cut(s) 438, 976, 1018, 1253, 1365, 1488
BspCNI CTCAG 6 cut(s) 589, 763, 1333, 1363, 1396, 1651
BspEI TCCGGA 1 cut(s) 1549
BspLI GGNNCC 1 cut(s) 950
BspMI ACCTGC 1 cut(s) 455
BspPI GGATC 1 cut(s) 556
BspT107I GGYRCC 1 cut(s) 948
BspTNI GGTCTC 1 cut(s) 132
BsrDI GCAATG 1 cut(s) 72
BsrI ACTGG 4 cut(s) 864, 883, 952, 1685
BssECI CCNNGG 5 cut(s) 672, 910, 970, 1019, 1040
BssMI GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
BssSI CACGAG 1 cut(s) 1481
BssT1I CCWWGG 1 cut(s) 910
Bst2BI CACGAG 1 cut(s) 1481
Bst2UI CCWGG 3 cut(s) 1255, 1382, 1726
Bst4CI ACNGT 5 cut(s) 32, 208, 494, 805, 1422
Bst6I CTCTTC 2 cut(s) 390, 1070
BstC8I GCNNGC 4 cut(s) 235, 746, 1277, 1358
BstDEI CTNAG 9 cut(s) 368, 515, 597, 771, 1320, 1335, 1371, 1404, 1659
BstEII GGTNACC 1 cut(s) 1498
BstENI CCTNNNNNAGG 1 cut(s) 1493
BstF5I GGATG 5 cut(s) 286, 439, 838, 1330, 1740
BstHHI GCGC 3 cut(s) 689, 850, 1403
BstKTI GATC 8 cut(s) 85, 412, 564, 632, 646, 657, 1142, 1759
BstMAI GTCTC 5 cut(s) 132, 205, 1058, 1547, 1583
BstMBI GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
BstMWI GCNNNNNNNGC 7 cut(s) 750, 885, 966, 1192, 1362, 1407, 1577
BstNI CCWGG 3 cut(s) 1255, 1382, 1726
BstNSI RCATGY 5 cut(s) 237, 1214, 1318, 1605, 1656
BstPAI GACNNNNGTC 2 cut(s) 114, 495
BstPI GGTNACC 1 cut(s) 1498
BstSCI CCNGG 7 cut(s) 672, 1018, 1039, 1040, 1253, 1380, 1724
BstSFI CTRYAG 1 cut(s) 339
BstV1I GCAGC 4 cut(s) 554, 1457, 1564, 1661
BstV2I GAAGAC 1 cut(s) 1184
BstX2I RGATCY 1 cut(s) 629
BstYI RGATCY 1 cut(s) 629
Bsu36I CCTNAGG 1 cut(s) 1320
BsuI GTATCC 1 cut(s) 849
BsuRI GGCC 6 cut(s) 438, 976, 1018, 1253, 1365, 1488
BtgZI GCGATG 1 cut(s) 69
BtrI CACGTC 1 cut(s) 930
BtsCI GGATG 5 cut(s) 286, 439, 838, 1330, 1740
BtsI GCAGTG 2 cut(s) 857, 940
BtsIMutI CAGTG 3 cut(s) 857, 890, 940
BveI ACCTGC 1 cut(s) 455
Cac8I GCNNGC 4 cut(s) 235, 746, 1277, 1358
CaiI CAGNNNCTG 2 cut(s) 1426, 1451
CfoI GCGC 3 cut(s) 689, 850, 1403
Cfr13I GGNCC 5 cut(s) 4, 497, 551, 974, 1486
Cfr9I CCCGGG 1 cut(s) 1040
CsiI ACCWGGT 1 cut(s) 1724
Csp6I GTAC 6 cut(s) 400, 610, 768, 949, 1614, 1698
CspCI CAANNNNNGTGG 2 cut(s) 1464, 1499
CviQI GTAC 6 cut(s) 400, 610, 768, 949, 1614, 1698
DdeI CTNAG 9 cut(s) 368, 515, 597, 771, 1320, 1335, 1371, 1404, 1659
DpnI GATC 8 cut(s) 84, 411, 563, 631, 645, 656, 1141, 1758
DpnII GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
DraI TTTAAA 1 cut(s) 1471
EaeI YGGCCR 1 cut(s) 436
Eam1104I CTCTTC 2 cut(s) 390, 1070
EarI CTCTTC 2 cut(s) 390, 1070
Eco130I CCWWGG 1 cut(s) 910
Eco147I AGGCCT 1 cut(s) 1253
Eco31I GGTCTC 1 cut(s) 132
Eco47I GGWCC 3 cut(s) 4, 497, 551
Eco57I CTGAAG 1 cut(s) 161
Eco81I CCTNAGG 1 cut(s) 1320
Eco88I CYCGRG 2 cut(s) 971, 1040
Eco91I GGTNACC 1 cut(s) 1498
EcoNI CCTNNNNNAGG 1 cut(s) 1493
EcoO65I GGTNACC 1 cut(s) 1498
EcoRI GAATTC 1 cut(s) 372
EcoRII CCWGG 3 cut(s) 1253, 1380, 1724
EcoT14I CCWWGG 1 cut(s) 910
EcoT22I ATGCAT 2 cut(s) 235, 1303
ErhI CCWWGG 1 cut(s) 910
Esp3I CGTCTC 2 cut(s) 1058, 1547
FalI AAGNNNNNCTT 2 cut(s) 361, 393
FaqI GGGAC 1 cut(s) 1057
FauNDI CATATG 3 cut(s) 9, 724, 1303
FbaI TGATCA 1 cut(s) 1756
Fnu4HI GCNGC 4 cut(s) 543, 1446, 1578, 1650
FokI GGATG 5 cut(s) 293, 426, 845, 1337, 1747
Fsp4HI GCNGC 4 cut(s) 543, 1446, 1578, 1650
FspBI CTAG 3 cut(s) 89, 357, 1050
FspI TGCGCA 2 cut(s) 688, 849
GlaI GCGC 3 cut(s) 688, 849, 1402
GluI GCNGC 4 cut(s) 543, 1446, 1578, 1650
GsaI CCCAGC 3 cut(s) 463, 1126, 1575
HaeIII GGCC 6 cut(s) 438, 976, 1018, 1253, 1365, 1488
HapII CCGG 7 cut(s) 500, 674, 1019, 1041, 1503, 1550, 1712
HhaI GCGC 3 cut(s) 689, 850, 1403
Hin6I GCGC 3 cut(s) 687, 848, 1401
HinP1I GCGC 3 cut(s) 687, 848, 1401
HinfI GANTC 4 cut(s) 38, 527, 778, 836
HpaII CCGG 7 cut(s) 500, 674, 1019, 1041, 1503, 1550, 1712
HphI GGTGA 4 cut(s) 1186, 1428, 1510, 1726
Hpy166II GTNNAC 1 cut(s) 1216
Hpy188I TCNGA 5 cut(s) 120, 229, 648, 1453, 1660
Hpy188III TCNNGA 6 cut(s) 179, 452, 524, 554, 1322, 1550
Hpy8I GTNNAC 1 cut(s) 1216
Hpy99I CGWCG 1 cut(s) 641
HpyCH4III ACNGT 5 cut(s) 32, 208, 494, 805, 1422
HpyCH4IV ACGT 2 cut(s) 636, 929
HpyF10VI GCNNNNNNNGC 7 cut(s) 750, 885, 966, 1192, 1362, 1407, 1577
HpyF3I CTNAG 9 cut(s) 368, 515, 597, 771, 1320, 1335, 1371, 1404, 1659
HpySE526I ACGT 2 cut(s) 636, 929
HspAI GCGC 3 cut(s) 687, 848, 1401
Kpn2I TCCGGA 1 cut(s) 1549
KpnI GGTACC 1 cut(s) 952
Ksp22I TGATCA 1 cut(s) 1756
Kzo9I GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
LmnI GCTCC 3 cut(s) 249, 943, 1568
Lsp1109I GCAGC 4 cut(s) 554, 1457, 1564, 1661
LweI GCATC 4 cut(s) 220, 1315, 1735, 1741
MabI ACCWGGT 1 cut(s) 1724
MaeI CTAG 3 cut(s) 89, 357, 1050
MaeII ACGT 2 cut(s) 636, 929
MaeIII GTNAC 9 cut(s) 488, 680, 1498, 1525, 1604, 1639, 1676, 1688, 1714
MalI GATC 8 cut(s) 84, 411, 563, 631, 645, 656, 1141, 1758
MboI GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
MfeI CAATTG 2 cut(s) 897, 1396
MflI RGATCY 1 cut(s) 629
MhlI GDGCHC 2 cut(s) 940, 1188
MlsI TGGCCA 1 cut(s) 438
MluNI TGGCCA 1 cut(s) 438
MmeI TCCRAC 1 cut(s) 1712
Mox20I TGGCCA 1 cut(s) 438
Mph1103I ATGCAT 2 cut(s) 235, 1303
MroI TCCGGA 1 cut(s) 1549
MroXI GAANNNNTTC 1 cut(s) 1389
MscI TGGCCA 1 cut(s) 438
MseI TTAA 4 cut(s) 626, 864, 1191, 1470
MslI CAYNNNNRTG 2 cut(s) 21, 1113
Msp20I TGGCCA 1 cut(s) 438
MspA1I CMGCKG 1 cut(s) 1695
MspI CCGG 7 cut(s) 500, 674, 1019, 1041, 1503, 1550, 1712
MspR9I CCNGG 7 cut(s) 674, 1020, 1041, 1042, 1255, 1382, 1726
MunI CAATTG 2 cut(s) 897, 1396
MvaI CCWGG 3 cut(s) 1255, 1382, 1726
MwoI GCNNNNNNNGC 7 cut(s) 750, 885, 966, 1192, 1362, 1407, 1577
NciI CCSGG 4 cut(s) 674, 1020, 1041, 1042
NdeI CATATG 3 cut(s) 9, 724, 1303
NdeII GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
NlaIV GGNNCC 1 cut(s) 950
NmuCI GTSAC 5 cut(s) 488, 1498, 1604, 1688, 1714
NsbI TGCGCA 2 cut(s) 688, 849
NsiI ATGCAT 2 cut(s) 235, 1303
NspI RCATGY 5 cut(s) 237, 1214, 1318, 1605, 1656
PaeI GCATGC 1 cut(s) 237
PceI AGGCCT 1 cut(s) 1253
PciI ACATGT 2 cut(s) 1210, 1601
PdmI GAANNNNTTC 1 cut(s) 1389
PfeI GAWTC 4 cut(s) 38, 527, 778, 836
PflMI CCANNNNNTGG 1 cut(s) 1731
PkrI GCNGC 4 cut(s) 544, 1447, 1579, 1651
PscI ACATGT 2 cut(s) 1210, 1601
PshAI GACNNNNGTC 2 cut(s) 114, 495
Psp6I CCWGG 3 cut(s) 1253, 1380, 1724
PspEI GGTNACC 1 cut(s) 1498
PspFI CCCAGC 3 cut(s) 459, 1122, 1571
PspGI CCWGG 3 cut(s) 1253, 1380, 1724
PspN4I GGNNCC 1 cut(s) 950
PspPI GGNCC 5 cut(s) 4, 497, 551, 974, 1486
PstNI CAGNNNCTG 2 cut(s) 1426, 1451
PsuI RGATCY 1 cut(s) 629
RsaI GTAC 6 cut(s) 401, 611, 769, 950, 1615, 1699
RsaNI GTAC 6 cut(s) 400, 610, 768, 949, 1614, 1698
RseI CAYNNNNRTG 2 cut(s) 21, 1113
SaqAI TTAA 4 cut(s) 626, 864, 1191, 1470
SatI GCNGC 4 cut(s) 543, 1446, 1578, 1650
Sau3AI GATC 8 cut(s) 82, 409, 561, 629, 643, 654, 1139, 1756
Sau96I GGNCC 5 cut(s) 4, 497, 551, 974, 1486
ScrFI CCNGG 7 cut(s) 674, 1020, 1041, 1042, 1255, 1382, 1726
SduI GDGCHC 2 cut(s) 940, 1188
SexAI ACCWGGT 1 cut(s) 1724
SfaNI GCATC 4 cut(s) 220, 1315, 1735, 1741
SfcI CTRYAG 1 cut(s) 339
SinI GGWCC 3 cut(s) 4, 497, 551
SmaI CCCGGG 1 cut(s) 1042
SmiMI CAYNNNNRTG 2 cut(s) 21, 1113
SphI GCATGC 1 cut(s) 237
SseBI AGGCCT 1 cut(s) 1253
SsiI CCGC 3 cut(s) 42, 381, 1693
SspMI CTAG 3 cut(s) 89, 357, 1050
StuI AGGCCT 1 cut(s) 1253
StyD4I CCNGG 7 cut(s) 672, 1018, 1039, 1040, 1253, 1380, 1724
StyI CCWWGG 1 cut(s) 910
TaaI ACNGT 5 cut(s) 32, 208, 494, 805, 1422
TaiI ACGT 2 cut(s) 639, 932
TaqI TCGA 4 cut(s) 105, 451, 639, 1350
TaqII GACCGA 1 cut(s) 1196
TatI WGTACW 3 cut(s) 399, 609, 767
TfiI GAWTC 4 cut(s) 38, 527, 778, 836
Tru1I TTAA 4 cut(s) 626, 864, 1191, 1470
Tru9I TTAA 4 cut(s) 626, 864, 1191, 1470
TscAI CASTG 3 cut(s) 857, 890, 940
TseFI GTSAC 5 cut(s) 488, 1498, 1604, 1688, 1714
TseI GCWGC 4 cut(s) 542, 1445, 1577, 1649
Tsp45I GTSAC 5 cut(s) 488, 1498, 1604, 1688, 1714
TspMI CCCGGG 1 cut(s) 1040
TspRI CASTG 3 cut(s) 857, 890, 940
Van91I CCANNNNNTGG 1 cut(s) 1731
VpaK11BI GGWCC 3 cut(s) 4, 497, 551
XagI CCTNNNNNAGG 1 cut(s) 1493
XapI RAATTY 2 cut(s) 372, 384
XceI RCATGY 5 cut(s) 237, 1214, 1318, 1605, 1656
XcmI CCANNNNNNNNNTGG 1 cut(s) 1677
XmaI CCCGGG 1 cut(s) 1040
XmnI GAANNNNTTC 1 cut(s) 1389
XspI CTAG 3 cut(s) 89, 357, 1050
Zsp2I ATGCAT 2 cut(s) 235, 1303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.