RLG00000011163

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000864
Physical Location & Seq
Forward (+)
7250985 .. 7252589
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011163

Sequence Viewer

Length: 1605 bp
ATGAAAAGGGCGAGCAGCAGCGGAAGTAGTGCTGGCGAGGACTCCAATTATCTTCACTCCAATTATCTTGAAGAAGAAGTAAATGTGGACTCTGACGACGATGCAAATTATCTTGAAGGAGGAAACTCAGACGCCAATGTGTTCTCTGGGGAGGGTCAGTCTCCACGGCAGGGTTATACTTTACTGAGAGAACAAGAAATTGGGCAACTTCAGGAGGATGATATTGCAGGAGTGTCTACTGTCCTGTCCATATCGAAATCCGCTGCATGCTTCCTACTATGTCACTTTAGTTGGAGGGTCAATAGACTGAAGGACGAATGGTTTTCTGATGAAGACAAAGTCCGGGAAACAGCAGGCTTGTTGAGGAAGCCGGTATTCCTGCATCAATTAGGTAGTGTCAATTGCGGAATATGTTTTGATGACTATGACTATTCATGCGATGAATTAGCCGGTGGTACTATTTTCTCAGCTGCTTGTGGTCATCCTTTTTGTAAAGATTGTTGGACAGGTTATATTAGCACATCGATTAACGATGGTCCAGGATGTTTGATGCTGAGATGTCCTGAACCATCTTGTAGTGCAGCAGTTGATCGGGATTTGATCCGAAATGTGTTGAAAAACCAACATGATCACGAGATTGAGAGGTATAAGCGCTACCTTCTGAGATCTTATGTCGAAAAGCATAAGCAGATGAAGTGGTGCCCTGCTCCTGACTGTGAGTATGCTGTCAAAGTGTTTGATGAAGATTTGACTGGAAATGGAAGCTGTTATGATGTTTCTTGCATCTGCTCAAATAGCTTCTGTTGGAATTGTGTTGAGGAGGTTCATAGTCCCGTTCAGTGCGACACTGTGGGAAAGTGGATATTGAAGAACAAGGATGATTCCCAGAATGCACAATGGATAGTGGTTAATACTAAGCCCTGTCCCAAGTGCAAAACACCGATTGAGAAGAACAATGGGTGTAATCACATGAGGTGCAGTCCACCTTGTGGGCATCACTTTTGCTGGTTATGCCTCGGGCCACTTGGTTGCAAATGCAATAGTTTCAATCGAGCTGCAAACCAAAATGCGAAGAAGGAGGAGAGTCAGAGTGAAAGGGAGAGGAAGAGGCTAAAGATGAGTTTAGAGAGATACAATCATTATTATGTGCGCTGGGCAAACAATCAAGCTTCAAAGAAAAAGGCAGCTGAGTCATTGCATAAGGCGCAAACAGTGCACATCGTGAAACTTGCTAGCAAACCAATTCCCTTTCTTACCAAGACTAATGATTTTGAGTTCATTATAGAGGCATGGAAACAGATAATTGAATGTAGGCAGGTGATCAAATGGACCTATGCATATGGTTATTACATACCTGAGGAAAATAAATATGACAAGAAGCGGCAGCTGTTTGAGTACTTGCAGGGCCAAGCAGAGCACAGCCTGGAGAGGCTTCACCAATGTGCCGAGACTGAAATGATAGAGTTTGTCAAGGATTGGGCCCCGTTGGAAAAGTTCCCGGACTTCCGTCTAAAGCTCATACAATTGACAAATGTGACCGGTACTTATTTTAAGAAGCTGGTTACAGCCCTGGAGAATGGCCTCACGGAGGTGGAGACTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR zf-RanBP

Protein Analysis

535

Amino Acids

61.06

Weight (kDa)

6.02

Isoelectric Point (pI)

48.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_ARI1 PF21235 69 - 108 3.4e-08 E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR PF01485 214 - 281 5.9e-15 IBR domain, a half RING-finger domain
IBR_2 PF22605 301 - 346 7e-11 IBR domain
IBR_1 PF22191 304 - 341 3.9e-10 IBR domain
Ariadne PF19422 376 - 528 1e-09 Ariadne domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1306
Acc36I ACCTGC 1 cut(s) 1306
AccB1I GGYRCC 1 cut(s) 699
AccB7I CCANNNNNTGG 1 cut(s) 989
AccI GTMKAC 1 cut(s) 236
AciI CCGC 4 cut(s) 21, 261, 405, 1381
AclWI GGATC 1 cut(s) 595
AcuI CTGAAG 2 cut(s) 194, 329
AcyI GRCGYC 1 cut(s) 132
AdeI CACNNNGTG 2 cut(s) 989, 1222
AfaI GTAC 3 cut(s) 457, 1397, 1543
AfeI AGCGCT 1 cut(s) 653
AfiI CCNNNNNNNGG 3 cut(s) 170, 989, 1588
AgeI ACCGGT 1 cut(s) 1538
AgsI TTSAA 7 cut(s) 71, 116, 616, 868, 1048, 1173, 1307
AjnI CCWGG 3 cut(s) 538, 1422, 1569
AjuI GAANNNNNNNTTGG 2 cut(s) 183, 215
AleI CACNNNNGTG 2 cut(s) 1440, 1589
Alw21I GWGCWC 2 cut(s) 1218, 1419
Alw26I GTCTC 3 cut(s) 165, 1442, 1589
Alw44I GTGCAC 1 cut(s) 1214
AlwI GGATC 1 cut(s) 595
Ama87I CYCGRG 1 cut(s) 1016
Aor51HI AGCGCT 1 cut(s) 653
AoxI GGCC 4 cut(s) 1019, 1405, 1479, 1579
ApaI GGGCCC 1 cut(s) 1483
ApaLI GTGCAC 1 cut(s) 1214
ApeKI GCWGC 8 cut(s) 15, 18, 263, 470, 581, 1055, 1184, 1384
AsiGI ACCGGT 1 cut(s) 1538
AspLEI GCGC 3 cut(s) 654, 1152, 1207
AspS9I GGNCC 6 cut(s) 536, 1019, 1329, 1405, 1479, 1480
AsuC2I CCSGG 2 cut(s) 344, 1499
AsuHPI GGTGA 2 cut(s) 1330, 1427
AsuNHI GCTAGC 1 cut(s) 1232
AvaI CYCGRG 1 cut(s) 1016
AvaII GGWCC 2 cut(s) 536, 1329
AxyI CCTNAGG 1 cut(s) 1356
BaeGI GKGCMC 3 cut(s) 704, 1218, 1483
BanI GGYRCC 1 cut(s) 699
BanII GRGCYC 1 cut(s) 1483
BauI CACGAG 1 cut(s) 632
BbsI GAAGAC 1 cut(s) 339
Bbv12I GWGCWC 2 cut(s) 1218, 1419
BbvI GCAGC 8 cut(s) 27, 30, 250, 457, 593, 1042, 1196, 1396
BccI CCATC 2 cut(s) 527, 577
BceAI ACGGC 1 cut(s) 182
BciT130I CCWGG 3 cut(s) 540, 1424, 1571
BclI TGATCA 2 cut(s) 628, 1320
BcnI CCSGG 2 cut(s) 344, 1499
BcoDI GTCTC 3 cut(s) 165, 1442, 1589
BfaI CTAG 3 cut(s) 1233, 1599, 1603
BfoI RGCGCY 1 cut(s) 655
BfuAI ACCTGC 1 cut(s) 1306
BglII AGATCT 1 cut(s) 665
BisI GCNGC 9 cut(s) 16, 19, 264, 471, 582, 1056, 1185, 1382, 1385
BlsI GCNGC 9 cut(s) 17, 20, 265, 472, 583, 1057, 1186, 1383, 1386
BmcAI AGTACT 1 cut(s) 1397
Bme1390I CCNGG 5 cut(s) 344, 540, 1424, 1499, 1571
Bme18I GGWCC 2 cut(s) 536, 1329
BmeT110I CYCGRG 1 cut(s) 1016
BmgT120I GGNCC 6 cut(s) 536, 1019, 1329, 1405, 1479, 1480
BmiI GGNNCC 3 cut(s) 701, 1481, 1482
BmrFI CCNGG 5 cut(s) 344, 540, 1424, 1499, 1571
BmsI GCATC 5 cut(s) 91, 391, 540, 792, 1003
BmtI GCTAGC 1 cut(s) 1236
BoxI GACNNNNGTC 1 cut(s) 1506
BpiI GAAGAC 1 cut(s) 339
BpmI CTGGAG 2 cut(s) 1445, 1592
BpuMI CCSGG 2 cut(s) 344, 1499
Bsa29I ATCGAT 1 cut(s) 524
BsaHI GRCGYC 1 cut(s) 132
BsaJI CCNNGG 3 cut(s) 164, 1015, 1569
BsaWI WCCGGW 1 cut(s) 1538
BsaXI ACNNNNNCTCC 2 cut(s) 143, 173
Bsc4I CCNNNNNNNGG 3 cut(s) 170, 989, 1588
Bse118I RCCGGY 3 cut(s) 370, 449, 1538
Bse1I ACTGG 1 cut(s) 757
Bse21I CCTNAGG 1 cut(s) 1356
Bse3DI GCAATG 1 cut(s) 1193
BseBI CCWGG 3 cut(s) 540, 1424, 1571
BseCI ATCGAT 1 cut(s) 524
BseDI CCNNGG 3 cut(s) 164, 1015, 1569
BseGI GGATG 4 cut(s) 223, 481, 548, 883
BseLI CCNNNNNNNGG 3 cut(s) 170, 989, 1588
BseMI GCAATG 1 cut(s) 1193
BseMII CTCAG 7 cut(s) 141, 176, 480, 545, 653, 1179, 1347
BseNI ACTGG 1 cut(s) 757
BseRI GAGGAG 2 cut(s) 833, 1094
BseSI GKGCMC 3 cut(s) 704, 1218, 1483
BseXI GCAGC 8 cut(s) 27, 30, 250, 457, 593, 1042, 1196, 1396
BseYI CCCAGC 1 cut(s) 1152
BsgI GTGCAG 2 cut(s) 600, 997
BshFI GGCC 4 cut(s) 1021, 1407, 1481, 1581
BshNI GGYRCC 1 cut(s) 699
BshTI ACCGGT 1 cut(s) 1538
BshVI ATCGAT 1 cut(s) 524
BsiHKAI GWGCWC 2 cut(s) 1218, 1419
BsiHKCI CYCGRG 1 cut(s) 1016
BsiSI CCGG 5 cut(s) 343, 371, 450, 1499, 1539
BslFI GGGAC 2 cut(s) 816, 909
BslI CCNNNNNNNGG 3 cut(s) 170, 989, 1588
BsmAI GTCTC 3 cut(s) 165, 1442, 1589
BsmFI GGGAC 2 cut(s) 816, 909
BsmI GAATGC 1 cut(s) 895
BsnI GGCC 4 cut(s) 1021, 1407, 1481, 1581
BsoBI CYCGRG 1 cut(s) 1016
Bsp120I GGGCCC 1 cut(s) 1479
Bsp1286I GDGCHC 4 cut(s) 704, 1218, 1419, 1483
Bsp143I GATC 5 cut(s) 589, 600, 628, 665, 1320
BspACI CCGC 4 cut(s) 21, 261, 405, 1381
BspANI GGCC 4 cut(s) 1021, 1407, 1481, 1581
BspCNI CTCAG 7 cut(s) 140, 177, 479, 546, 654, 1180, 1348
BspDI ATCGAT 1 cut(s) 524
BspLI GGNNCC 3 cut(s) 701, 1481, 1482
BspMI ACCTGC 1 cut(s) 1306
BspOI GCTAGC 1 cut(s) 1236
BspPI GGATC 1 cut(s) 595
BspT107I GGYRCC 1 cut(s) 699
BsrDI GCAATG 1 cut(s) 1193
BsrFI RCCGGY 3 cut(s) 370, 449, 1538
BsrI ACTGG 1 cut(s) 757
BssAI RCCGGY 3 cut(s) 370, 449, 1538
BssECI CCNNGG 3 cut(s) 164, 1015, 1569
BssMI GATC 5 cut(s) 589, 600, 628, 665, 1320
BssNI GRCGYC 1 cut(s) 132
BssSI CACGAG 1 cut(s) 632
Bst2BI CACGAG 1 cut(s) 632
Bst2UI CCWGG 3 cut(s) 540, 1424, 1571
Bst4CI ACNGT 4 cut(s) 241, 716, 850, 1213
Bst6I CTCTTC 1 cut(s) 1100
BstACI GRCGYC 1 cut(s) 132
BstAPI GCANNNNNTGC 1 cut(s) 1213
BstC8I GCNNGC 5 cut(s) 13, 34, 268, 355, 1234
BstDEI CTNAG 8 cut(s) 127, 185, 466, 554, 662, 915, 1188, 1356
BstDSI CCRYGG 1 cut(s) 164
BstENI CCTNNNNNAGG 1 cut(s) 1586
BstF5I GGATG 4 cut(s) 223, 481, 548, 883
BstH2I RGCGCY 1 cut(s) 655
BstHHI GCGC 3 cut(s) 654, 1152, 1207
BstKTI GATC 5 cut(s) 592, 603, 631, 668, 1323
BstMAI GTCTC 3 cut(s) 165, 1442, 1589
BstMBI GATC 5 cut(s) 589, 600, 628, 665, 1320
BstMWI GCNNNNNNNGC 4 cut(s) 795, 1011, 1204, 1213
BstNI CCWGG 3 cut(s) 540, 1424, 1571
BstNSI RCATGY 1 cut(s) 270
BstPAI GACNNNNGTC 1 cut(s) 1506
BstSCI CCNGG 5 cut(s) 342, 538, 1422, 1497, 1569
BstSLI GKGCMC 3 cut(s) 704, 1218, 1483
BstV1I GCAGC 8 cut(s) 27, 30, 250, 457, 593, 1042, 1196, 1396
BstV2I GAAGAC 1 cut(s) 339
BstX2I RGATCY 1 cut(s) 665
BstYI RGATCY 1 cut(s) 665
Bsu15I ATCGAT 1 cut(s) 524
Bsu36I CCTNAGG 1 cut(s) 1356
BsuRI GGCC 4 cut(s) 1021, 1407, 1481, 1581
BsuTUI ATCGAT 1 cut(s) 524
BtgI CCRYGG 1 cut(s) 164
BtgZI GCGATG 1 cut(s) 453
BtsCI GGATG 4 cut(s) 223, 481, 548, 883
BtsIMutI CAGTG 3 cut(s) 845, 846, 1218
BveI ACCTGC 1 cut(s) 1306
Cac8I GCNNGC 5 cut(s) 13, 34, 268, 355, 1234
CfoI GCGC 3 cut(s) 654, 1152, 1207
Cfr10I RCCGGY 3 cut(s) 370, 449, 1538
Cfr13I GGNCC 6 cut(s) 536, 1019, 1329, 1405, 1479, 1480
ClaI ATCGAT 1 cut(s) 524
CseI GACGC 1 cut(s) 140
Csp6I GTAC 3 cut(s) 456, 1396, 1542
CspAI ACCGGT 1 cut(s) 1538
CviAII CATG 5 cut(s) 267, 435, 626, 970, 1290
CviQI GTAC 3 cut(s) 456, 1396, 1542
DdeI CTNAG 8 cut(s) 127, 185, 466, 554, 662, 915, 1188, 1356
DpnI GATC 5 cut(s) 591, 602, 630, 667, 1322
DpnII GATC 5 cut(s) 589, 600, 628, 665, 1320
DraIII CACNNNGTG 2 cut(s) 989, 1222
Eam1104I CTCTTC 1 cut(s) 1100
EarI CTCTTC 1 cut(s) 1100
Eco24I GRGCYC 1 cut(s) 1483
Eco47I GGWCC 2 cut(s) 536, 1329
Eco47III AGCGCT 1 cut(s) 653
Eco57I CTGAAG 2 cut(s) 194, 329
Eco81I CCTNAGG 1 cut(s) 1356
Eco88I CYCGRG 1 cut(s) 1016
EcoNI CCTNNNNNAGG 1 cut(s) 1586
EcoO109I RGGNCCY 1 cut(s) 1480
EcoRII CCWGG 3 cut(s) 538, 1422, 1569
EcoT22I ATGCAT 1 cut(s) 1339
EcoT38I GRGCYC 1 cut(s) 1483
FaeI CATG 5 cut(s) 270, 438, 629, 973, 1293
FaqI GGGAC 2 cut(s) 816, 909
FatI CATG 5 cut(s) 266, 434, 625, 969, 1289
FauNDI CATATG 1 cut(s) 1339
FbaI TGATCA 2 cut(s) 628, 1320
FblI GTMKAC 1 cut(s) 236
Fnu4HI GCNGC 9 cut(s) 16, 19, 264, 471, 582, 1056, 1185, 1382, 1385
FokI GGATG 4 cut(s) 230, 468, 555, 890
FriOI GRGCYC 1 cut(s) 1483
Fsp4HI GCNGC 9 cut(s) 16, 19, 264, 471, 582, 1056, 1185, 1382, 1385
FspBI CTAG 3 cut(s) 1233, 1599, 1603
GlaI GCGC 3 cut(s) 653, 1151, 1206
GluI GCNGC 9 cut(s) 16, 19, 264, 471, 582, 1056, 1185, 1382, 1385
GsaI CCCAGC 1 cut(s) 1156
GsuI CTGGAG 2 cut(s) 1445, 1592
HaeII RGCGCY 1 cut(s) 655
HaeIII GGCC 4 cut(s) 1021, 1407, 1481, 1581
HapII CCGG 5 cut(s) 343, 371, 450, 1499, 1539
HgaI GACGC 1 cut(s) 140
HhaI GCGC 3 cut(s) 654, 1152, 1207
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 5 cut(s) 270, 438, 629, 973, 1293
Hin6I GCGC 3 cut(s) 652, 1150, 1205
HinP1I GCGC 3 cut(s) 652, 1150, 1205
HindIII AAGCTT 1 cut(s) 1167
HinfI GANTC 5 cut(s) 41, 89, 881, 1084, 1190
HpaII CCGG 5 cut(s) 343, 371, 450, 1499, 1539
HphI GGTGA 2 cut(s) 1330, 1427
Hpy166II GTNNAC 4 cut(s) 88, 237, 983, 1216
Hpy188I TCNGA 6 cut(s) 94, 130, 328, 605, 663, 1089
Hpy188III TCNNGA 8 cut(s) 68, 113, 212, 563, 593, 632, 710, 1222
Hpy8I GTNNAC 4 cut(s) 88, 237, 983, 1216
Hpy99I CGWCG 1 cut(s) 101
HpyAV CCTTC 4 cut(s) 110, 304, 668, 1069
HpyCH4III ACNGT 4 cut(s) 241, 716, 850, 1213
HpyF10VI GCNNNNNNNGC 4 cut(s) 795, 1011, 1204, 1213
HpyF3I CTNAG 8 cut(s) 127, 185, 466, 554, 662, 915, 1188, 1356
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 5 cut(s) 270, 438, 629, 973, 1293
HspAI GCGC 3 cut(s) 652, 1150, 1205
Ksp22I TGATCA 2 cut(s) 628, 1320
Kzo9I GATC 5 cut(s) 589, 600, 628, 665, 1320
LmnI GCTCC 1 cut(s) 712
Lsp1109I GCAGC 8 cut(s) 27, 30, 250, 457, 593, 1042, 1196, 1396
LweI GCATC 5 cut(s) 91, 391, 540, 792, 1003
MaeI CTAG 3 cut(s) 1233, 1599, 1603
MaeIII GTNAC 3 cut(s) 281, 1534, 1561
MalI GATC 5 cut(s) 591, 602, 630, 667, 1322
MboI GATC 5 cut(s) 589, 600, 628, 665, 1320
MboII GAAGA 9 cut(s) 44, 83, 86, 344, 755, 880, 961, 1084, 1117
MfeI CAATTG 2 cut(s) 400, 1523
MflI RGATCY 1 cut(s) 665
MhlI GDGCHC 4 cut(s) 704, 1218, 1419, 1483
MlyI GAGTC 4 cut(s) 35, 83, 1093, 1199
MmeI TCCRAC 4 cut(s) 272, 482, 785, 1467
Mph1103I ATGCAT 1 cut(s) 1339
MseI TTAA 3 cut(s) 528, 909, 1551
MslI CAYNNNNRTG 3 cut(s) 1143, 1440, 1589
MspA1I CMGCKG 5 cut(s) 21, 263, 470, 1187, 1387
MspI CCGG 5 cut(s) 343, 371, 450, 1499, 1539
MspR9I CCNGG 5 cut(s) 344, 540, 1424, 1499, 1571
MunI CAATTG 2 cut(s) 400, 1523
Mva1269I GAATGC 1 cut(s) 895
MvaI CCWGG 3 cut(s) 540, 1424, 1571
MwoI GCNNNNNNNGC 4 cut(s) 795, 1011, 1204, 1213
NciI CCSGG 2 cut(s) 344, 1499
NdeI CATATG 1 cut(s) 1339
NdeII GATC 5 cut(s) 589, 600, 628, 665, 1320
NheI GCTAGC 1 cut(s) 1232
NlaIII CATG 5 cut(s) 270, 438, 629, 973, 1293
NlaIV GGNNCC 3 cut(s) 701, 1481, 1482
NmeAIII GCCGAG 1 cut(s) 1471
NmuCI GTSAC 2 cut(s) 281, 1534
NsiI ATGCAT 1 cut(s) 1339
NspI RCATGY 1 cut(s) 270
OliI CACNNNNGTG 2 cut(s) 1440, 1589
PaeI GCATGC 1 cut(s) 270
PaqCI CACCTGC 1 cut(s) 1306
PctI GAATGC 1 cut(s) 895
PfeI GAWTC 1 cut(s) 881
PflFI GACNNNGTC 1 cut(s) 338
PflMI CCANNNNNTGG 1 cut(s) 989
PfoI TCCNGGA 3 cut(s) 342, 538, 1497
PinAI ACCGGT 1 cut(s) 1538
PkrI GCNGC 9 cut(s) 17, 20, 265, 472, 583, 1057, 1186, 1383, 1386
PleI GAGTC 4 cut(s) 35, 83, 1092, 1198
PpsI GAGTC 4 cut(s) 35, 83, 1092, 1198
PshAI GACNNNNGTC 1 cut(s) 1506
Psp6I CCWGG 3 cut(s) 538, 1422, 1569
PspFI CCCAGC 1 cut(s) 1152
PspGI CCWGG 3 cut(s) 538, 1422, 1569
PspN4I GGNNCC 3 cut(s) 701, 1481, 1482
PspOMI GGGCCC 1 cut(s) 1479
PspPI GGNCC 6 cut(s) 536, 1019, 1329, 1405, 1479, 1480
PsuI RGATCY 1 cut(s) 665
PsyI GACNNNGTC 1 cut(s) 338
PvuII CAGCTG 3 cut(s) 470, 1187, 1387
RsaI GTAC 3 cut(s) 457, 1397, 1543
RsaNI GTAC 3 cut(s) 456, 1396, 1542
RseI CAYNNNNRTG 3 cut(s) 1143, 1440, 1589
SaqAI TTAA 3 cut(s) 528, 909, 1551
SatI GCNGC 9 cut(s) 16, 19, 264, 471, 582, 1056, 1185, 1382, 1385
Sau3AI GATC 5 cut(s) 589, 600, 628, 665, 1320
Sau96I GGNCC 6 cut(s) 536, 1019, 1329, 1405, 1479, 1480
ScaI AGTACT 1 cut(s) 1397
SchI GAGTC 4 cut(s) 35, 83, 1093, 1199
ScrFI CCNGG 5 cut(s) 344, 540, 1424, 1499, 1571
SduI GDGCHC 4 cut(s) 704, 1218, 1419, 1483
SfaNI GCATC 5 cut(s) 91, 391, 540, 792, 1003
SinI GGWCC 2 cut(s) 536, 1329
SmiMI CAYNNNNRTG 3 cut(s) 1143, 1440, 1589
SphI GCATGC 1 cut(s) 270
SsiI CCGC 4 cut(s) 21, 261, 405, 1381
SspMI CTAG 3 cut(s) 1233, 1599, 1603
StyD4I CCNGG 5 cut(s) 342, 538, 1422, 1497, 1569
TaaI ACNGT 4 cut(s) 241, 716, 850, 1213
TaqI TCGA 4 cut(s) 254, 524, 675, 1051
TatI WGTACW 1 cut(s) 1395
TauI GCSGC 1 cut(s) 1384
TfiI GAWTC 1 cut(s) 881
Tru1I TTAA 3 cut(s) 528, 909, 1551
Tru9I TTAA 3 cut(s) 528, 909, 1551
TscAI CASTG 3 cut(s) 845, 853, 1218
TseFI GTSAC 2 cut(s) 281, 1534
TseI GCWGC 8 cut(s) 15, 18, 263, 470, 581, 1055, 1184, 1384
Tsp45I GTSAC 2 cut(s) 281, 1534
TspDTI ATGAA 8 cut(s) 17, 345, 423, 456, 707, 756, 815, 1267
TspGWI ACGGA 2 cut(s) 1496, 1601
TspRI CASTG 3 cut(s) 845, 853, 1218
Tth111I GACNNNGTC 1 cut(s) 338
Van91I CCANNNNNTGG 1 cut(s) 989
VneI GTGCAC 1 cut(s) 1214
VpaK11BI GGWCC 2 cut(s) 536, 1329
XagI CCTNNNNNAGG 1 cut(s) 1586
XceI RCATGY 1 cut(s) 270
XmiI GTMKAC 1 cut(s) 236
XspI CTAG 3 cut(s) 1233, 1599, 1603
ZrmI AGTACT 1 cut(s) 1397
Zsp2I ATGCAT 1 cut(s) 1339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.