E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfiI | CCNNNNNNNGG | 1 cut(s) | 263 |
| AgsI | TTSAA | 2 cut(s) | 109, 374 |
| Alw21I | GWGCWC | 1 cut(s) | 444 |
| Alw26I | GTCTC | 2 cut(s) | 22, 80 |
| Alw44I | GTGCAC | 1 cut(s) | 440 |
| Ama87I | CYCGRG | 1 cut(s) | 251 |
| AoxI | GGCC | 1 cut(s) | 254 |
| ApaLI | GTGCAC | 1 cut(s) | 440 |
| ApeKI | GCWGC | 2 cut(s) | 229, 270 |
| AspS9I | GGNCC | 1 cut(s) | 254 |
| AsuHPI | GGTGA | 1 cut(s) | 442 |
| AvaI | CYCGRG | 1 cut(s) | 251 |
| BaeGI | GKGCMC | 1 cut(s) | 444 |
| Bbv12I | GWGCWC | 1 cut(s) | 444 |
| BbvI | GCAGC | 2 cut(s) | 241, 257 |
| BciVI | GTATCC | 1 cut(s) | 135 |
| BcoDI | GTCTC | 2 cut(s) | 22, 80 |
| BfuI | GTATCC | 1 cut(s) | 135 |
| BisI | GCNGC | 2 cut(s) | 230, 271 |
| BlsI | GCNGC | 2 cut(s) | 231, 272 |
| BmeT110I | CYCGRG | 1 cut(s) | 251 |
| BmgT120I | GGNCC | 1 cut(s) | 254 |
| BpuEI | CTTGAG | 1 cut(s) | 434 |
| BsaJI | CCNNGG | 4 cut(s) | 57, 167, 196, 250 |
| BsaWI | WCCGGW | 1 cut(s) | 73 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 263 |
| Bse1I | ACTGG | 1 cut(s) | 150 |
| BseDI | CCNNGG | 4 cut(s) | 57, 167, 196, 250 |
| BseGI | GGATG | 2 cut(s) | 124, 312 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 263 |
| BseNI | ACTGG | 1 cut(s) | 150 |
| BseRI | GAGGAG | 1 cut(s) | 74 |
| BseSI | GKGCMC | 1 cut(s) | 444 |
| BseXI | GCAGC | 2 cut(s) | 241, 257 |
| BseYI | CCCAGC | 1 cut(s) | 378 |
| BsgI | GTGCAG | 1 cut(s) | 238 |
| BshFI | GGCC | 1 cut(s) | 256 |
| BsiHKAI | GWGCWC | 1 cut(s) | 444 |
| BsiHKCI | CYCGRG | 1 cut(s) | 251 |
| BsiSI | CCGG | 1 cut(s) | 74 |
| BslFI | GGGAC | 2 cut(s) | 313, 395 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 263 |
| BsmAI | GTCTC | 2 cut(s) | 22, 80 |
| BsmBI | CGTCTC | 1 cut(s) | 80 |
| BsmFI | GGGAC | 2 cut(s) | 313, 395 |
| BsnI | GGCC | 1 cut(s) | 256 |
| BsoBI | CYCGRG | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 1 cut(s) | 444 |
| BspANI | GGCC | 1 cut(s) | 256 |
| BsrI | ACTGG | 1 cut(s) | 150 |
| BssECI | CCNNGG | 4 cut(s) | 57, 167, 196, 250 |
| BssT1I | CCWWGG | 1 cut(s) | 196 |
| Bst4CI | ACNGT | 2 cut(s) | 91, 171 |
| BstDSI | CCRYGG | 1 cut(s) | 167 |
| BstF5I | GGATG | 2 cut(s) | 124, 312 |
| BstMAI | GTCTC | 2 cut(s) | 22, 80 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 51, 246, 276 |
| BstSLI | GKGCMC | 1 cut(s) | 444 |
| BstV1I | GCAGC | 2 cut(s) | 241, 257 |
| BsuI | GTATCC | 1 cut(s) | 135 |
| BsuRI | GGCC | 1 cut(s) | 256 |
| BtgI | CCRYGG | 1 cut(s) | 167 |
| BtsCI | GGATG | 2 cut(s) | 124, 312 |
| Cfr13I | GGNCC | 1 cut(s) | 254 |
| CviAII | CATG | 5 cut(s) | 9, 211, 246, 457, 493 |
| CviJI | RGCY | 6 cut(s) | 160, 201, 256, 270, 324, 410 |
| CviKI_1 | RGCY | 6 cut(s) | 160, 201, 256, 270, 324, 410 |
| Eco130I | CCWWGG | 1 cut(s) | 196 |
| Eco88I | CYCGRG | 1 cut(s) | 251 |
| EcoT14I | CCWWGG | 1 cut(s) | 196 |
| ErhI | CCWWGG | 1 cut(s) | 196 |
| Esp3I | CGTCTC | 1 cut(s) | 80 |
| FaeI | CATG | 5 cut(s) | 12, 214, 249, 460, 496 |
| FaqI | GGGAC | 2 cut(s) | 313, 395 |
| FatI | CATG | 5 cut(s) | 8, 210, 245, 456, 492 |
| Fnu4HI | GCNGC | 2 cut(s) | 230, 271 |
| FokI | GGATG | 2 cut(s) | 131, 319 |
| Fsp4HI | GCNGC | 2 cut(s) | 230, 271 |
| GluI | GCNGC | 2 cut(s) | 230, 271 |
| GsaI | CCCAGC | 1 cut(s) | 382 |
| HaeIII | GGCC | 1 cut(s) | 256 |
| HapII | CCGG | 1 cut(s) | 74 |
| Hin1II | CATG | 5 cut(s) | 12, 214, 249, 460, 496 |
| HinfI | GANTC | 2 cut(s) | 64, 122 |
| HpaII | CCGG | 1 cut(s) | 74 |
| HphI | GGTGA | 1 cut(s) | 442 |
| Hpy166II | GTNNAC | 4 cut(s) | 32, 79, 167, 442 |
| Hpy188III | TCNNGA | 2 cut(s) | 319, 413 |
| Hpy8I | GTNNAC | 4 cut(s) | 32, 79, 167, 442 |
| HpyAV | CCTTC | 2 cut(s) | 328, 371 |
| HpyCH4III | ACNGT | 2 cut(s) | 91, 171 |
| HpyCH4V | TGCA | 7 cut(s) | 54, 134, 174, 219, 273, 279, 442 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 51, 246, 276 |
| Hsp92II | CATG | 5 cut(s) | 12, 214, 249, 460, 496 |
| LpnPI | CCDG | 9 cut(s) | 31, 87, 131, 226, 274, 282, 288, 364, 460 |
| Lsp1109I | GCAGC | 2 cut(s) | 241, 257 |
| MaeIII | GTNAC | 1 cut(s) | 38 |
| MboII | GAAGA | 5 cut(s) | 121, 202, 343, 352, 445 |
| MfeI | CAATTG | 2 cut(s) | 183, 274 |
| MhlI | GDGCHC | 1 cut(s) | 444 |
| MluCI | AATT | 4 cut(s) | 49, 183, 274, 501 |
| MnlI | CCTC | 5 cut(s) | 52, 207, 260, 260, 409 |
| MspI | CCGG | 1 cut(s) | 74 |
| MunI | CAATTG | 2 cut(s) | 183, 274 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 51, 246, 276 |
| NlaIII | CATG | 5 cut(s) | 12, 214, 249, 460, 496 |
| PfeI | GAWTC | 2 cut(s) | 64, 122 |
| PkrI | GCNGC | 2 cut(s) | 231, 272 |
| PspFI | CCCAGC | 1 cut(s) | 378 |
| PspPI | GGNCC | 1 cut(s) | 254 |
| SatI | GCNGC | 2 cut(s) | 230, 271 |
| Sau96I | GGNCC | 1 cut(s) | 254 |
| SduI | GDGCHC | 1 cut(s) | 444 |
| SetI | ASST | 4 cut(s) | 218, 293, 363, 432 |
| SmlI | CTYRAG | 1 cut(s) | 413 |
| SmoI | CTYRAG | 1 cut(s) | 413 |
| Sse9I | AATT | 4 cut(s) | 49, 183, 274, 501 |
| StyI | CCWWGG | 1 cut(s) | 196 |
| TaaI | ACNGT | 2 cut(s) | 91, 171 |
| TaqI | TCGA | 1 cut(s) | 318 |
| TasI | AATT | 4 cut(s) | 49, 183, 274, 501 |
| TfiI | GAWTC | 2 cut(s) | 64, 122 |
| TseI | GCWGC | 2 cut(s) | 229, 270 |
| TspDTI | ATGAA | 5 cut(s) | 140, 353, 473, 495, 509 |
| VneI | GTGCAC | 1 cut(s) | 440 |