Rw3G014120

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000864
Physical Location & Seq
Forward (+)
14029661 .. 14031434
1774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G014120.1

Sequence Viewer

Length: 1656 bp
ATGCACTATCAGAGCGAAGAAGACTACACAACCGTATATAGTGGTGATGAAGATGCAGGGATCTACAGCACATCCGATGACGATCTTGATCTTCCAGAAGATGACAAAGTCAATGGTTCTGGTGAGATTAATTATACTTTTCTGAAAGAAGAAGAAATTGCCAAGCTTCAGAAAGATTATATTACAGAAGTGTCTACGGTCCTTACCATATCAAAATCCGATGCATGCTTACTGCTCCTTTACTTTAATTGGAGGGACGAGGAACTAAAAGATGAATGGTTTGCTGATGAAGAAAAAGTTCGAGAGAATGCAGGCTTGTTGGAGAAACCAATGGTTAAACATAGTGCCAGTGCAAATCAACCAATTACTTGCCGGATTTGTTTTGATGAGTACTACTATTCATCAGAGAGTACTATTAGTAGTATTTTGTCAACCTCTTGTGGTCATCCTTATTGCCGAGATTGCTGGGAAAGCTATATTAGCACATCAATCCGTGACTCCGGTCCGGCATGTTTGATGCTGAGATGTCCTGAACCATCTTGTAAGGCAGCAGTTGGTCCTGAATTAATCGAAAACGTGCTGGTGGTGACAGGAAAAAAAGCCGGGTATGACAAGTACAAGCATTACCTGTTAAGATCATATGTCGAACATAACAGGAAGAAGATTAGATGGTGTCCTGCTCCGGATTGCAAGTATGCTATTAAGTTTGATGCTCCAGACAGAATGTCATCATATGATGTTTCGTGTCTTTGCTCGCATAGTTATTGCTGGAATTGTGAGGAGGAGAATCATCGTCCGGTGTTCTGCGAGACTGTGAAGAAGTGGATTTTGAAGAACGCGGATGATTCTCAGAATGGACAATGGATAATGGTTAATACCAAGCCCTGTCCTAAGTGTAACAGATCGATCGAAAAGAACCAAGGGTGTAATCACATGACCTGCACAGCTCCTTGTAGATTTCAATTTTGCTGGTATTGCCTCGGACCATACGGTACATGCCATTGCAACGCGTTTAATAGGAGGGCAACTGATATGTCAGGGGAAGTTTGGGGCATGGCTGAGAAAGAGAGAATGCAGGCAAAGATAGATTTAGAGAGATATGATCATTACTATGAACGTTGGGCAAACAATGGATCATCAAAGGAAAGAGCTCTCAAGGATTTTGATAAGGTGAAGACCGTGCACATTAAGGAACTTGGACACATACAGAAAAATACAATAGAGCATAAGTACGATTTTATCATAGAGGCCTGGCAACAGATAATTGAATGCAGGCAGGTATTGCGATGGACCTATGCTTATGGATACTACATGAAGGAGAATGAGGATGCTAAGCGTCATCTCTTCGAGCACTTGCAAGGCCATGCCGAGTTCAGCCTGGAGAGGCTTCACAAATGTGCAGAGAGTGAACTGCAACAGTTTCTCAACCTGGCTCATGACGATAAGGTTTGGTTTATAGAGTTCCAAAAGAAACTCGTGAGTCTGACAAAGGTGACTGGCACTTATTTCGACAGGCTGGTTACTGCGTTGGAGGACGGCCTTTCTGAGATTTTAACGAAGAAACAGAAAAAGAAAACTTGGACTTGTGAGCTTTGTACCCATGTAAATCCACTATCTACCAGAAGGTGTGAGACGTGCACTCCACAAATTCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR zf-RanBP

Protein Analysis

551

Amino Acids

64.27

Weight (kDa)

5.81

Isoelectric Point (pI)

57.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_ARI1 PF21235 56 - 94 3.6e-08 E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR PF01485 204 - 269 4.7e-14 IBR domain, a half RING-finger domain
IBR_2 PF22605 289 - 330 1.5e-09 IBR domain
IBR_1 PF22191 292 - 331 3.5e-11 IBR domain
Ariadne PF19422 365 - 516 2.2e-07 Ariadne domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 947, 1267
AccI GTMKAC 1 cut(s) 194
AccII CGCG 2 cut(s) 839, 1010
AccIII TCCGGA 1 cut(s) 682
AciI CCGC 1 cut(s) 839
AclI AACGTT 1 cut(s) 1117
AclWI GGATC 2 cut(s) 68, 1141
AcsI RAATTY 1 cut(s) 1647
AcuI CTGAAG 1 cut(s) 152
AfaI GTAC 6 cut(s) 392, 412, 617, 994, 1232, 1597
AflIII ACRYGT 1 cut(s) 1008
AgsI TTSAA 3 cut(s) 832, 962, 1268
AhdI GACNNNNNGTC 1 cut(s) 724
AjiI CACGTC 1 cut(s) 1635
AjnI CCWGG 3 cut(s) 1250, 1377, 1428
AleI CACNNNNGTG 1 cut(s) 1395
AluBI AGCT 5 cut(s) 166, 474, 947, 1151, 1591
AluI AGCT 5 cut(s) 166, 474, 947, 1151, 1591
Alw21I GWGCWC 4 cut(s) 1153, 1185, 1353, 1640
Alw26I GTCTC 2 cut(s) 803, 1625
Alw44I GTGCAC 2 cut(s) 1181, 1636
AlwI GGATC 2 cut(s) 68, 1141
Aor13HI TCCGGA 1 cut(s) 682
AoxI GGCC 3 cut(s) 1248, 1360, 1537
ApaLI GTGCAC 2 cut(s) 1181, 1636
ApeKI GCWGC 1 cut(s) 548
ApoI RAATTY 1 cut(s) 1647
AseI ATTAAT 2 cut(s) 129, 566
Asp700I GAANNNNTTC 1 cut(s) 297
AspS9I GGNCC 5 cut(s) 199, 503, 557, 983, 1290
AsuC2I CCSGG 1 cut(s) 604
AsuHPI GGTGA 5 cut(s) 56, 134, 598, 1183, 1504
AvaII GGWCC 5 cut(s) 199, 503, 557, 983, 1290
BaeGI GKGCMC 2 cut(s) 1185, 1640
BanII GRGCYC 1 cut(s) 1153
BauI CACGAG 1 cut(s) 1475
BbsI GAAGAC 2 cut(s) 27, 1181
Bbv12I GWGCWC 4 cut(s) 1153, 1185, 1353, 1640
BbvI GCAGC 1 cut(s) 560
BccI CCATC 3 cut(s) 544, 663, 1281
BceAI ACGGC 1 cut(s) 1552
BcgI CGANNNNNNTGC 2 cut(s) 1489, 1523
BciT130I CCWGG 3 cut(s) 1252, 1379, 1430
BciVI GTATCC 1 cut(s) 1298
BclI TGATCA 1 cut(s) 1102
BcnI CCSGG 1 cut(s) 604
BcoDI GTCTC 2 cut(s) 803, 1625
BfmI CTRYAG 1 cut(s) 64
BfuAI ACCTGC 2 cut(s) 947, 1267
BfuI GTATCC 1 cut(s) 1298
BisI GCNGC 1 cut(s) 549
BlpI GCTNAGC 1 cut(s) 1332
BlsI GCNGC 1 cut(s) 550
BmcAI AGTACT 2 cut(s) 392, 412
Bme1390I CCNGG 4 cut(s) 604, 1252, 1379, 1430
Bme18I GGWCC 5 cut(s) 199, 503, 557, 983, 1290
BmeRI GACNNNNNGTC 1 cut(s) 724
BmgBI CACGTC 1 cut(s) 1635
BmgT120I GGNCC 5 cut(s) 199, 503, 557, 983, 1290
BmrFI CCNGG 4 cut(s) 604, 1252, 1379, 1430
BmsI GCATC 5 cut(s) 43, 211, 507, 700, 1318
BoxI GACNNNNGTC 1 cut(s) 501
BpiI GAAGAC 2 cut(s) 27, 1181
BpmI CTGGAG 2 cut(s) 699, 1400
Bpu1102I GCTNAGC 1 cut(s) 1332
BpuEI CTTGAG 1 cut(s) 1139
BpuMI CCSGG 1 cut(s) 604
Bsa29I ATCGAT 1 cut(s) 905
BsaBI GATNNNNATC 2 cut(s) 81, 87
BsaJI CCNNGG 2 cut(s) 919, 979
BsaWI WCCGGW 3 cut(s) 500, 682, 796
BsaXI ACNNNNNCTCC 2 cut(s) 1624, 1654
Bse1I ACTGG 2 cut(s) 348, 1501
Bse3DI GCAATG 1 cut(s) 1000
Bse8I GATNNNNATC 2 cut(s) 81, 87
BseAI TCCGGA 1 cut(s) 682
BseBI CCWGG 3 cut(s) 1252, 1379, 1430
BseCI ATCGAT 1 cut(s) 905
BseDI CCNNGG 2 cut(s) 919, 979
BseGI GGATG 4 cut(s) 71, 445, 847, 1333
BseJI GATNNNNATC 2 cut(s) 81, 87
BseMI GCAATG 1 cut(s) 1000
BseMII CTCAG 4 cut(s) 512, 863, 1050, 1536
BseNI ACTGG 2 cut(s) 348, 1501
BseRI GAGGAG 2 cut(s) 794, 797
BseSI GKGCMC 2 cut(s) 1185, 1640
BseXI GCAGC 1 cut(s) 560
BseYI CCCAGC 1 cut(s) 465
BsgI GTGCAG 2 cut(s) 925, 1419
Bsh1236I CGCG 2 cut(s) 839, 1010
Bsh1285I CGRYCG 1 cut(s) 909
BshFI GGCC 3 cut(s) 1250, 1362, 1539
BshVI ATCGAT 1 cut(s) 905
BsiEI CGRYCG 1 cut(s) 909
BsiHKAI GWGCWC 4 cut(s) 1153, 1185, 1353, 1640
BsiSI CCGG 6 cut(s) 373, 501, 506, 603, 683, 797
BslFI GGGAC 1 cut(s) 269
BsmAI GTCTC 2 cut(s) 803, 1625
BsmBI CGTCTC 1 cut(s) 1625
BsmFI GGGAC 1 cut(s) 269
BsmI GAATGC 3 cut(s) 313, 1077, 1274
BsnI GGCC 3 cut(s) 1250, 1362, 1539
Bsp1286I GDGCHC 4 cut(s) 1153, 1185, 1353, 1640
Bsp13I TCCGGA 1 cut(s) 682
Bsp143I GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
Bsp1720I GCTNAGC 1 cut(s) 1332
BspACI CCGC 1 cut(s) 839
BspANI GGCC 3 cut(s) 1250, 1362, 1539
BspCNI CTCAG 4 cut(s) 513, 862, 1051, 1537
BspDI ATCGAT 1 cut(s) 905
BspEI TCCGGA 1 cut(s) 682
BspFNI CGCG 2 cut(s) 839, 1010
BspHI TCATGA 1 cut(s) 1435
BspMI ACCTGC 2 cut(s) 947, 1267
BspPI GGATC 2 cut(s) 68, 1141
BsrDI GCAATG 1 cut(s) 1000
BsrI ACTGG 2 cut(s) 348, 1501
BssECI CCNNGG 2 cut(s) 919, 979
BssMI GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
BssSI CACGAG 1 cut(s) 1475
BssT1I CCWWGG 1 cut(s) 919
Bst2BI CACGAG 1 cut(s) 1475
Bst2UI CCWGG 3 cut(s) 1252, 1379, 1430
Bst4CI ACNGT 6 cut(s) 34, 199, 814, 992, 1180, 1419
Bst6I CTCTTC 1 cut(s) 1349
BstAPI GCANNNNNTGC 1 cut(s) 1282
BstC8I GCNNGC 5 cut(s) 226, 313, 755, 1077, 1274
BstDEI CTNAG 6 cut(s) 521, 849, 891, 1059, 1332, 1545
BstF5I GGATG 4 cut(s) 71, 445, 847, 1333
BstFNI CGCG 2 cut(s) 839, 1010
BstKTI GATC 8 cut(s) 63, 85, 91, 638, 905, 909, 1105, 1136
BstMAI GTCTC 2 cut(s) 803, 1625
BstMBI GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
BstMCI CGRYCG 1 cut(s) 909
BstMWI GCNNNNNNNGC 5 cut(s) 462, 471, 480, 975, 1282
BstNI CCWGG 3 cut(s) 1252, 1379, 1430
BstNSI RCATGY 3 cut(s) 228, 513, 999
BstPAI GACNNNNGTC 1 cut(s) 501
BstSCI CCNGG 4 cut(s) 602, 1250, 1377, 1428
BstSFI CTRYAG 1 cut(s) 64
BstSLI GKGCMC 2 cut(s) 1185, 1640
BstUI CGCG 2 cut(s) 839, 1010
BstV1I GCAGC 1 cut(s) 560
BstV2I GAAGAC 2 cut(s) 27, 1181
BstX2I RGATCY 1 cut(s) 60
BstYI RGATCY 1 cut(s) 60
Bsu15I ATCGAT 1 cut(s) 905
BsuI GTATCC 1 cut(s) 1298
BsuRI GGCC 3 cut(s) 1250, 1362, 1539
BsuTUI ATCGAT 1 cut(s) 905
BtgZI GCGATG 1 cut(s) 1300
BtrI CACGTC 1 cut(s) 1635
BtsCI GGATG 4 cut(s) 71, 445, 847, 1333
BtsIMutI CAGTG 1 cut(s) 355
BveI ACCTGC 2 cut(s) 947, 1267
Cac8I GCNNGC 5 cut(s) 226, 313, 755, 1077, 1274
CciI TCATGA 1 cut(s) 1435
Cfr13I GGNCC 5 cut(s) 199, 503, 557, 983, 1290
ClaI ATCGAT 1 cut(s) 905
CpoI CGGWCCG 1 cut(s) 503
CseI GACGC 1 cut(s) 1325
Csp6I GTAC 6 cut(s) 391, 411, 616, 993, 1231, 1596
CspI CGGWCCG 1 cut(s) 503
CviAII CATG 9 cut(s) 225, 510, 934, 996, 1054, 1312, 1364, 1436, 1601
CviQI GTAC 6 cut(s) 391, 411, 616, 993, 1231, 1596
DdeI CTNAG 6 cut(s) 521, 849, 891, 1059, 1332, 1545
DpnI GATC 8 cut(s) 62, 84, 90, 637, 904, 908, 1104, 1135
DpnII GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
DriI GACNNNNNGTC 1 cut(s) 724
Eam1104I CTCTTC 1 cut(s) 1349
Eam1105I GACNNNNNGTC 1 cut(s) 724
EarI CTCTTC 1 cut(s) 1349
Ecl136II GAGCTC 1 cut(s) 1151
Eco130I CCWWGG 1 cut(s) 919
Eco147I AGGCCT 1 cut(s) 1250
Eco24I GRGCYC 1 cut(s) 1153
Eco47I GGWCC 5 cut(s) 199, 503, 557, 983, 1290
Eco53kI GAGCTC 1 cut(s) 1151
Eco57I CTGAAG 1 cut(s) 152
EcoICRI GAGCTC 1 cut(s) 1151
EcoRII CCWGG 3 cut(s) 1250, 1377, 1428
EcoT14I CCWWGG 1 cut(s) 919
EcoT22I ATGCAT 1 cut(s) 226
EcoT38I GRGCYC 1 cut(s) 1153
ErhI CCWWGG 1 cut(s) 919
Esp3I CGTCTC 1 cut(s) 1625
FaeI CATG 9 cut(s) 228, 513, 937, 999, 1057, 1315, 1367, 1439, 1604
FaqI GGGAC 1 cut(s) 269
FatI CATG 9 cut(s) 224, 509, 933, 995, 1053, 1311, 1363, 1435, 1600
FauNDI CATATG 2 cut(s) 640, 733
FbaI TGATCA 1 cut(s) 1102
FblI GTMKAC 1 cut(s) 194
Fnu4HI GCNGC 1 cut(s) 549
FokI GGATG 4 cut(s) 58, 432, 854, 1340
FriOI GRGCYC 1 cut(s) 1153
Fsp4HI GCNGC 1 cut(s) 549
GluI GCNGC 1 cut(s) 549
GsaI CCCAGC 1 cut(s) 469
GsuI CTGGAG 2 cut(s) 699, 1400
HaeIII GGCC 3 cut(s) 1250, 1362, 1539
HapII CCGG 6 cut(s) 373, 501, 506, 603, 683, 797
HgaI GACGC 1 cut(s) 1325
Hin1II CATG 9 cut(s) 228, 513, 937, 999, 1057, 1315, 1367, 1439, 1604
HincII GTYRAC 1 cut(s) 432
HindII GTYRAC 1 cut(s) 432
HindIII AAGCTT 1 cut(s) 164
HinfI GANTC 4 cut(s) 497, 787, 845, 1480
HpaII CCGG 6 cut(s) 373, 501, 506, 603, 683, 797
HphI GGTGA 5 cut(s) 56, 134, 598, 1183, 1504
Hpy166II GTNNAC 5 cut(s) 195, 432, 1183, 1409, 1638
Hpy188III TCNNGA 9 cut(s) 86, 95, 302, 530, 560, 683, 716, 1436, 1477
Hpy8I GTNNAC 5 cut(s) 195, 432, 1183, 1409, 1638
HpyAV CCTTC 2 cut(s) 1309, 1617
HpyCH4III ACNGT 6 cut(s) 34, 199, 814, 992, 1180, 1419
HpyCH4IV ACGT 3 cut(s) 576, 1117, 1634
HpyF10VI GCNNNNNNNGC 5 cut(s) 462, 471, 480, 975, 1282
HpyF3I CTNAG 6 cut(s) 521, 849, 891, 1059, 1332, 1545
HpySE526I ACGT 3 cut(s) 576, 1117, 1634
Hsp92II CATG 9 cut(s) 228, 513, 937, 999, 1057, 1315, 1367, 1439, 1604
Kpn2I TCCGGA 1 cut(s) 682
Ksp22I TGATCA 1 cut(s) 1102
Kzo9I GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
LmnI GCTCC 4 cut(s) 240, 685, 718, 952
Lsp1109I GCAGC 1 cut(s) 560
LweI GCATC 5 cut(s) 43, 211, 507, 700, 1318
MaeII ACGT 3 cut(s) 576, 1117, 1634
MaeIII GTNAC 5 cut(s) 494, 586, 896, 1492, 1519
MalI GATC 8 cut(s) 62, 84, 90, 637, 904, 908, 1104, 1135
MboI GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
MflI RGATCY 1 cut(s) 60
MhlI GDGCHC 4 cut(s) 1153, 1185, 1353, 1640
MluCI AATT 9 cut(s) 130, 156, 247, 363, 563, 772, 962, 1263, 1647
MluI ACGCGT 1 cut(s) 1008
MlyI GAGTC 2 cut(s) 491, 1489
MmeI TCCRAC 2 cut(s) 300, 1509
Mph1103I ATGCAT 1 cut(s) 226
MroI TCCGGA 1 cut(s) 682
MroXI GAANNNNTTC 1 cut(s) 297
MslI CAYNNNNRTG 2 cut(s) 1110, 1395
MspI CCGG 6 cut(s) 373, 501, 506, 603, 683, 797
MspR9I CCNGG 4 cut(s) 604, 1252, 1379, 1430
Mva1269I GAATGC 3 cut(s) 313, 1077, 1274
MvaI CCWGG 3 cut(s) 1252, 1379, 1430
MvnI CGCG 2 cut(s) 839, 1010
MwoI GCNNNNNNNGC 5 cut(s) 462, 471, 480, 975, 1282
NciI CCSGG 1 cut(s) 604
NdeI CATATG 2 cut(s) 640, 733
NdeII GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
NlaIII CATG 9 cut(s) 228, 513, 937, 999, 1057, 1315, 1367, 1439, 1604
NmeAIII GCCGAG 2 cut(s) 482, 1393
NmuCI GTSAC 3 cut(s) 494, 586, 1492
NsiI ATGCAT 1 cut(s) 226
NspI RCATGY 3 cut(s) 228, 513, 999
OliI CACNNNNGTG 1 cut(s) 1395
PaeI GCATGC 1 cut(s) 228
PagI TCATGA 1 cut(s) 1435
PceI AGGCCT 1 cut(s) 1250
PctI GAATGC 3 cut(s) 313, 1077, 1274
PdmI GAANNNNTTC 1 cut(s) 297
PfeI GAWTC 2 cut(s) 787, 845
PflFI GACNNNGTC 1 cut(s) 107
PkrI GCNGC 1 cut(s) 550
Ple19I CGATCG 1 cut(s) 909
PleI GAGTC 2 cut(s) 491, 1488
PpsI GAGTC 2 cut(s) 491, 1488
PshAI GACNNNNGTC 1 cut(s) 501
PshBI ATTAAT 2 cut(s) 129, 566
Psp124BI GAGCTC 1 cut(s) 1153
Psp1406I AACGTT 1 cut(s) 1117
Psp6I CCWGG 3 cut(s) 1250, 1377, 1428
PspFI CCCAGC 1 cut(s) 465
PspGI CCWGG 3 cut(s) 1250, 1377, 1428
PspPI GGNCC 5 cut(s) 199, 503, 557, 983, 1290
PsuI RGATCY 1 cut(s) 60
PsyI GACNNNGTC 1 cut(s) 107
PvuI CGATCG 1 cut(s) 909
RsaI GTAC 6 cut(s) 392, 412, 617, 994, 1232, 1597
RsaNI GTAC 6 cut(s) 391, 411, 616, 993, 1231, 1596
RseI CAYNNNNRTG 2 cut(s) 1110, 1395
Rsr2I CGGWCCG 1 cut(s) 503
RsrII CGGWCCG 1 cut(s) 503
SacI GAGCTC 1 cut(s) 1153
SatI GCNGC 1 cut(s) 549
Sau3AI GATC 8 cut(s) 60, 82, 88, 635, 902, 906, 1102, 1133
Sau96I GGNCC 5 cut(s) 199, 503, 557, 983, 1290
ScaI AGTACT 2 cut(s) 392, 412
SchI GAGTC 2 cut(s) 491, 1489
ScrFI CCNGG 4 cut(s) 604, 1252, 1379, 1430
SduI GDGCHC 4 cut(s) 1153, 1185, 1353, 1640
SfaNI GCATC 5 cut(s) 43, 211, 507, 700, 1318
SfcI CTRYAG 1 cut(s) 64
SinI GGWCC 5 cut(s) 199, 503, 557, 983, 1290
SmiMI CAYNNNNRTG 2 cut(s) 1110, 1395
SmlI CTYRAG 1 cut(s) 1154
SmoI CTYRAG 1 cut(s) 1154
SphI GCATGC 1 cut(s) 228
Sse9I AATT 9 cut(s) 130, 156, 247, 363, 563, 772, 962, 1263, 1647
SseBI AGGCCT 1 cut(s) 1250
SsiI CCGC 1 cut(s) 839
SstI GAGCTC 1 cut(s) 1153
StuI AGGCCT 1 cut(s) 1250
StyD4I CCNGG 4 cut(s) 602, 1250, 1377, 1428
StyI CCWWGG 1 cut(s) 919
TaaI ACNGT 6 cut(s) 34, 199, 814, 992, 1180, 1419
TaiI ACGT 3 cut(s) 579, 1120, 1637
TaqI TCGA 7 cut(s) 301, 570, 645, 905, 909, 1347, 1509
TasI AATT 9 cut(s) 130, 156, 247, 363, 563, 772, 962, 1263, 1647
TatI WGTACW 3 cut(s) 390, 410, 615
TfiI GAWTC 2 cut(s) 787, 845
TscAI CASTG 1 cut(s) 355
TseFI GTSAC 3 cut(s) 494, 586, 1492
TseI GCWGC 1 cut(s) 548
Tsp45I GTSAC 3 cut(s) 494, 586, 1492
TspDTI ATGAA 6 cut(s) 63, 288, 303, 390, 1128, 1328
TspGWI ACGGA 1 cut(s) 482
TspRI CASTG 1 cut(s) 355
Tth111I GACNNNGTC 1 cut(s) 107
VneI GTGCAC 2 cut(s) 1181, 1636
VpaK11BI GGWCC 5 cut(s) 199, 503, 557, 983, 1290
VspI ATTAAT 2 cut(s) 129, 566
XapI RAATTY 1 cut(s) 1647
XceI RCATGY 3 cut(s) 228, 513, 999
XmiI GTMKAC 1 cut(s) 194
XmnI GAANNNNTTC 1 cut(s) 297
ZrmI AGTACT 2 cut(s) 392, 412
Zsp2I ATGCAT 1 cut(s) 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.