E3 ubiquitin-protein ligase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UBA_ARI1 | PF21235 | 56 - 89 | 1.4e-08 | E3 ubiquitin-protein ligase ARIH1, UBA-like domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 194 |
| AclWI | GGATC | 1 cut(s) | 68 |
| AcuI | CTGAAG | 1 cut(s) | 152 |
| AluBI | AGCT | 1 cut(s) | 166 |
| AluI | AGCT | 1 cut(s) | 166 |
| AlwI | GGATC | 1 cut(s) | 68 |
| AseI | ATTAAT | 1 cut(s) | 129 |
| AspLEI | GCGC | 1 cut(s) | 71 |
| AspS9I | GGNCC | 1 cut(s) | 199 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 134 |
| AvaII | GGWCC | 1 cut(s) | 199 |
| BbsI | GAAGAC | 1 cut(s) | 27 |
| BfmI | CTRYAG | 1 cut(s) | 64 |
| Bme18I | GGWCC | 1 cut(s) | 199 |
| BmgT120I | GGNCC | 1 cut(s) | 199 |
| BmsI | GCATC | 3 cut(s) | 43, 80, 211 |
| BpiI | GAAGAC | 1 cut(s) | 27 |
| BsaBI | GATNNNNATC | 2 cut(s) | 81, 87 |
| Bse8I | GATNNNNATC | 2 cut(s) | 81, 87 |
| BseGI | GGATG | 1 cut(s) | 71 |
| BseJI | GATNNNNATC | 2 cut(s) | 81, 87 |
| BslFI | GGGAC | 1 cut(s) | 269 |
| BsmFI | GGGAC | 1 cut(s) | 269 |
| Bsp143I | GATC | 3 cut(s) | 60, 82, 88 |
| BspHI | TCATGA | 1 cut(s) | 141 |
| BspPI | GGATC | 1 cut(s) | 68 |
| BssMI | GATC | 3 cut(s) | 60, 82, 88 |
| Bst4CI | ACNGT | 2 cut(s) | 34, 199 |
| BstC8I | GCNNGC | 1 cut(s) | 226 |
| BstF5I | GGATG | 1 cut(s) | 71 |
| BstHHI | GCGC | 1 cut(s) | 71 |
| BstKTI | GATC | 3 cut(s) | 63, 85, 91 |
| BstMBI | GATC | 3 cut(s) | 60, 82, 88 |
| BstNSI | RCATGY | 1 cut(s) | 228 |
| BstSFI | CTRYAG | 1 cut(s) | 64 |
| BstV2I | GAAGAC | 1 cut(s) | 27 |
| BstX2I | RGATCY | 1 cut(s) | 60 |
| BstYI | RGATCY | 1 cut(s) | 60 |
| BtsCI | GGATG | 1 cut(s) | 71 |
| Cac8I | GCNNGC | 1 cut(s) | 226 |
| CciI | TCATGA | 1 cut(s) | 141 |
| CfoI | GCGC | 1 cut(s) | 71 |
| Cfr13I | GGNCC | 1 cut(s) | 199 |
| CviAII | CATG | 2 cut(s) | 142, 225 |
| CviJI | RGCY | 1 cut(s) | 166 |
| CviKI_1 | RGCY | 1 cut(s) | 166 |
| DpnI | GATC | 3 cut(s) | 62, 84, 90 |
| DpnII | GATC | 3 cut(s) | 60, 82, 88 |
| Eco47I | GGWCC | 1 cut(s) | 199 |
| Eco57I | CTGAAG | 1 cut(s) | 152 |
| EcoT22I | ATGCAT | 1 cut(s) | 226 |
| FaeI | CATG | 2 cut(s) | 145, 228 |
| FaiI | YATR | 9 cut(s) | 9, 37, 39, 66, 135, 143, 180, 209, 226 |
| FaqI | GGGAC | 1 cut(s) | 269 |
| FatI | CATG | 2 cut(s) | 141, 224 |
| FblI | GTMKAC | 1 cut(s) | 194 |
| FokI | GGATG | 1 cut(s) | 58 |
| GlaI | GCGC | 1 cut(s) | 70 |
| HhaI | GCGC | 1 cut(s) | 71 |
| Hin1II | CATG | 2 cut(s) | 145, 228 |
| Hin6I | GCGC | 1 cut(s) | 69 |
| HinP1I | GCGC | 1 cut(s) | 69 |
| HindIII | AAGCTT | 1 cut(s) | 164 |
| HphI | GGTGA | 2 cut(s) | 56, 134 |
| Hpy166II | GTNNAC | 1 cut(s) | 195 |
| Hpy188I | TCNGA | 3 cut(s) | 76, 171, 220 |
| Hpy188III | TCNNGA | 3 cut(s) | 86, 95, 142 |
| Hpy8I | GTNNAC | 1 cut(s) | 195 |
| HpyCH4III | ACNGT | 2 cut(s) | 34, 199 |
| HpyCH4V | TGCA | 3 cut(s) | 4, 56, 224 |
| Hsp92II | CATG | 2 cut(s) | 145, 228 |
| HspAI | GCGC | 1 cut(s) | 69 |
| Kzo9I | GATC | 3 cut(s) | 60, 82, 88 |
| LmnI | GCTCC | 1 cut(s) | 240 |
| LpnPI | CCDG | 3 cut(s) | 42, 105, 108 |
| LweI | GCATC | 3 cut(s) | 43, 80, 211 |
| MalI | GATC | 3 cut(s) | 62, 84, 90 |
| MboI | GATC | 3 cut(s) | 60, 82, 88 |
| MboII | GAAGA | 7 cut(s) | 29, 32, 62, 83, 110, 161, 164 |
| MflI | RGATCY | 1 cut(s) | 60 |
| MluCI | AATT | 3 cut(s) | 130, 156, 247 |
| MnlI | CCTC | 2 cut(s) | 246, 253 |
| Mph1103I | ATGCAT | 1 cut(s) | 226 |
| MseI | TTAA | 2 cut(s) | 129, 246 |
| NdeII | GATC | 3 cut(s) | 60, 82, 88 |
| NlaIII | CATG | 2 cut(s) | 145, 228 |
| NsiI | ATGCAT | 1 cut(s) | 226 |
| NspI | RCATGY | 1 cut(s) | 228 |
| PaeI | GCATGC | 1 cut(s) | 228 |
| PagI | TCATGA | 1 cut(s) | 141 |
| PflFI | GACNNNGTC | 1 cut(s) | 107 |
| PshBI | ATTAAT | 1 cut(s) | 129 |
| PspPI | GGNCC | 1 cut(s) | 199 |
| PsuI | RGATCY | 1 cut(s) | 60 |
| PsyI | GACNNNGTC | 1 cut(s) | 107 |
| SaqAI | TTAA | 2 cut(s) | 129, 246 |
| Sau3AI | GATC | 3 cut(s) | 60, 82, 88 |
| Sau96I | GGNCC | 1 cut(s) | 199 |
| SetI | ASST | 1 cut(s) | 168 |
| SfaNI | GCATC | 3 cut(s) | 43, 80, 211 |
| SfcI | CTRYAG | 1 cut(s) | 64 |
| SgeI | CNNG | 8 cut(s) | 69, 98, 107, 132, 154, 175, 237, 271 |
| SinI | GGWCC | 1 cut(s) | 199 |
| SphI | GCATGC | 1 cut(s) | 228 |
| Sse9I | AATT | 3 cut(s) | 130, 156, 247 |
| TaaI | ACNGT | 2 cut(s) | 34, 199 |
| TasI | AATT | 3 cut(s) | 130, 156, 247 |
| Tru1I | TTAA | 2 cut(s) | 129, 246 |
| Tru9I | TTAA | 2 cut(s) | 129, 246 |
| TspDTI | ATGAA | 3 cut(s) | 63, 130, 158 |
| Tth111I | GACNNNGTC | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 1 cut(s) | 199 |
| VspI | ATTAAT | 1 cut(s) | 129 |
| XceI | RCATGY | 1 cut(s) | 228 |
| XmiI | GTMKAC | 1 cut(s) | 194 |
| Zsp2I | ATGCAT | 1 cut(s) | 226 |