PA domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 221, 443, 963 |
| AarI | CACCTGC | 1 cut(s) | 1067 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 884 |
| Acc36I | ACCTGC | 1 cut(s) | 1067 |
| Acc65I | GGTACC | 1 cut(s) | 650 |
| AccB1I | GGYRCC | 2 cut(s) | 650, 1079 |
| AccBSI | CCGCTC | 1 cut(s) | 554 |
| AciI | CCGC | 2 cut(s) | 552, 787 |
| AclI | AACGTT | 1 cut(s) | 516 |
| AclWI | GGATC | 6 cut(s) | 287, 300, 422, 526, 854, 867 |
| AcoI | YGGCCR | 1 cut(s) | 375 |
| AcsI | RAATTY | 4 cut(s) | 49, 136, 315, 415 |
| AcuI | CTGAAG | 2 cut(s) | 279, 1076 |
| AfaI | GTAC | 2 cut(s) | 115, 652 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 65, 856 |
| AflII | CTTAAG | 1 cut(s) | 536 |
| AgsI | TTSAA | 7 cut(s) | 134, 146, 820, 1008, 1147, 1153, 1180 |
| AjnI | CCWGG | 3 cut(s) | 288, 556, 862 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1267, 1299 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 277, 309 |
| AluBI | AGCT | 8 cut(s) | 236, 371, 677, 725, 980, 1176, 1196, 1214 |
| AluI | AGCT | 8 cut(s) | 236, 371, 677, 725, 980, 1176, 1196, 1214 |
| Alw21I | GWGCWC | 1 cut(s) | 232 |
| Alw26I | GTCTC | 2 cut(s) | 759, 1195 |
| Alw44I | GTGCAC | 1 cut(s) | 228 |
| AlwI | GGATC | 6 cut(s) | 287, 300, 422, 526, 854, 867 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1019, 1040 |
| AoxI | GGCC | 4 cut(s) | 375, 447, 509, 688 |
| ApaLI | GTGCAC | 1 cut(s) | 228 |
| ApeKI | GCWGC | 9 cut(s) | 62, 160, 368, 455, 725, 1211, 1292, 1295, 1298 |
| ApoI | RAATTY | 4 cut(s) | 49, 136, 315, 415 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 306, 338, 1211, 1243 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1175 |
| Asp718I | GGTACC | 1 cut(s) | 650 |
| AspLEI | GCGC | 2 cut(s) | 165, 624 |
| AspS9I | GGNCC | 4 cut(s) | 56, 121, 448, 509 |
| AsuHPI | GGTGA | 4 cut(s) | 106, 316, 541, 1175 |
| AvaII | GGWCC | 2 cut(s) | 56, 121 |
| BaeGI | GKGCMC | 1 cut(s) | 232 |
| BamHI | GGATCC | 2 cut(s) | 292, 859 |
| BanI | GGYRCC | 2 cut(s) | 650, 1079 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 689, 721 |
| BbsI | GAAGAC | 2 cut(s) | 704, 1057 |
| Bbv12I | GWGCWC | 1 cut(s) | 232 |
| BbvI | GCAGC | 9 cut(s) | 49, 147, 380, 467, 712, 1223, 1279, 1282, 1285 |
| BccI | CCATC | 2 cut(s) | 383, 1244 |
| BceAI | ACGGC | 2 cut(s) | 462, 808 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 99, 133 |
| BciT130I | CCWGG | 3 cut(s) | 290, 558, 864 |
| BcoDI | GTCTC | 2 cut(s) | 759, 1195 |
| BfaI | CTAG | 4 cut(s) | 350, 981, 986, 1306 |
| BfmI | CTRYAG | 2 cut(s) | 600, 1074 |
| BfrI | CTTAAG | 1 cut(s) | 536 |
| BfuAI | ACCTGC | 1 cut(s) | 1067 |
| BisI | GCNGC | 9 cut(s) | 63, 161, 369, 456, 726, 1212, 1293, 1296, 1299 |
| BlpI | GCTNAGC | 1 cut(s) | 9 |
| BlsI | GCNGC | 9 cut(s) | 64, 162, 370, 457, 727, 1213, 1294, 1297, 1300 |
| BmcAI | AGTACT | 1 cut(s) | 115 |
| Bme1390I | CCNGG | 3 cut(s) | 290, 558, 864 |
| Bme18I | GGWCC | 2 cut(s) | 56, 121 |
| BmgT120I | GGNCC | 4 cut(s) | 56, 121, 448, 509 |
| BmiI | GGNNCC | 7 cut(s) | 286, 294, 450, 652, 861, 1081, 1134 |
| BmrFI | CCNGG | 3 cut(s) | 290, 558, 864 |
| BmrI | ACTGGG | 1 cut(s) | 27 |
| BmsI | GCATC | 3 cut(s) | 253, 500, 927 |
| BmuI | ACTGGG | 1 cut(s) | 27 |
| BoxI | GACNNNNGTC | 1 cut(s) | 357 |
| BpiI | GAAGAC | 2 cut(s) | 704, 1057 |
| BpmI | CTGGAG | 2 cut(s) | 699, 736 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 9 |
| BpuEI | CTTGAG | 1 cut(s) | 152 |
| BsaAI | YACGTR | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 4 cut(s) | 89, 288, 657, 855 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 940, 970 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 65, 856 |
| Bse1I | ACTGG | 5 cut(s) | 22, 229, 431, 719, 1109 |
| BseBI | CCWGG | 3 cut(s) | 290, 558, 864 |
| BseDI | CCNNGG | 4 cut(s) | 89, 288, 657, 855 |
| BseGI | GGATG | 1 cut(s) | 1255 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 65, 856 |
| BseMII | CTCAG | 2 cut(s) | 542, 1047 |
| BseNI | ACTGG | 5 cut(s) | 22, 229, 431, 719, 1109 |
| BseRI | GAGGAG | 1 cut(s) | 516 |
| BseSI | GKGCMC | 1 cut(s) | 232 |
| BseXI | GCAGC | 9 cut(s) | 49, 147, 380, 467, 712, 1223, 1279, 1282, 1285 |
| BseYI | CCCAGC | 1 cut(s) | 451 |
| BsgI | GTGCAG | 1 cut(s) | 1230 |
| BshFI | GGCC | 4 cut(s) | 377, 449, 511, 690 |
| BshNI | GGYRCC | 2 cut(s) | 650, 1079 |
| BsiHKAI | GWGCWC | 1 cut(s) | 232 |
| BsiSI | CCGG | 2 cut(s) | 378, 1029 |
| BslFI | GGGAC | 1 cut(s) | 1001 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 65, 856 |
| BsmAI | GTCTC | 2 cut(s) | 759, 1195 |
| BsmFI | GGGAC | 1 cut(s) | 1001 |
| BsnI | GGCC | 4 cut(s) | 377, 449, 511, 690 |
| Bsp1286I | GDGCHC | 1 cut(s) | 232 |
| Bsp143I | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 9 |
| Bsp19I | CCATGG | 3 cut(s) | 89, 657, 855 |
| BspACI | CCGC | 2 cut(s) | 552, 787 |
| BspANI | GGCC | 4 cut(s) | 377, 449, 511, 690 |
| BspCNI | CTCAG | 2 cut(s) | 541, 1046 |
| BspHI | TCATGA | 1 cut(s) | 744 |
| BspLI | GGNNCC | 7 cut(s) | 286, 294, 450, 652, 861, 1081, 1134 |
| BspMAI | CTGCAG | 1 cut(s) | 1078 |
| BspMI | ACCTGC | 1 cut(s) | 1067 |
| BspPI | GGATC | 6 cut(s) | 287, 300, 422, 526, 854, 867 |
| BspT107I | GGYRCC | 2 cut(s) | 650, 1079 |
| BspTI | CTTAAG | 1 cut(s) | 536 |
| BsrBI | CCGCTC | 1 cut(s) | 554 |
| BsrI | ACTGG | 5 cut(s) | 22, 229, 431, 719, 1109 |
| BssECI | CCNNGG | 4 cut(s) | 89, 288, 657, 855 |
| BssMI | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| BssT1I | CCWWGG | 3 cut(s) | 89, 657, 855 |
| Bst2UI | CCWGG | 3 cut(s) | 290, 558, 864 |
| Bst4CI | ACNGT | 5 cut(s) | 73, 103, 775, 851, 1042 |
| Bst6I | CTCTTC | 1 cut(s) | 1161 |
| BstAFI | CTTAAG | 1 cut(s) | 536 |
| BstBAI | YACGTR | 1 cut(s) | 412 |
| BstC8I | GCNNGC | 1 cut(s) | 664 |
| BstDEI | CTNAG | 6 cut(s) | 9, 297, 329, 528, 1033, 1197 |
| BstDSI | CCRYGG | 3 cut(s) | 89, 657, 855 |
| BstF5I | GGATG | 1 cut(s) | 1255 |
| BstHHI | GCGC | 2 cut(s) | 165, 624 |
| BstKTI | GATC | 5 cut(s) | 295, 430, 534, 862, 873 |
| BstMAI | GTCTC | 2 cut(s) | 759, 1195 |
| BstMBI | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 157, 263, 374, 404, 455, 1088, 1298 |
| BstNI | CCWGG | 3 cut(s) | 290, 558, 864 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 357 |
| BstSCI | CCNGG | 3 cut(s) | 288, 556, 862 |
| BstSFI | CTRYAG | 2 cut(s) | 600, 1074 |
| BstSLI | GKGCMC | 1 cut(s) | 232 |
| BstSNI | TACGTA | 1 cut(s) | 412 |
| BstV1I | GCAGC | 9 cut(s) | 49, 147, 380, 467, 712, 1223, 1279, 1282, 1285 |
| BstV2I | GAAGAC | 2 cut(s) | 704, 1057 |
| BstX2I | RGATCY | 3 cut(s) | 292, 531, 859 |
| BstYI | RGATCY | 3 cut(s) | 292, 531, 859 |
| BsuRI | GGCC | 4 cut(s) | 377, 449, 511, 690 |
| BtgI | CCRYGG | 3 cut(s) | 89, 657, 855 |
| BtsCI | GGATG | 1 cut(s) | 1255 |
| BtsI | GCAGTG | 1 cut(s) | 339 |
| BtsIMutI | CAGTG | 4 cut(s) | 339, 438, 771, 1038 |
| BveI | ACCTGC | 1 cut(s) | 1067 |
| Cac8I | GCNNGC | 1 cut(s) | 664 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1019, 1040 |
| CciI | TCATGA | 1 cut(s) | 744 |
| CfoI | GCGC | 2 cut(s) | 165, 624 |
| Cfr13I | GGNCC | 4 cut(s) | 56, 121, 448, 509 |
| CpoI | CGGWCCG | 1 cut(s) | 121 |
| CseI | GACGC | 2 cut(s) | 618, 709 |
| Csp6I | GTAC | 2 cut(s) | 114, 651 |
| CspI | CGGWCCG | 1 cut(s) | 121 |
| CviAII | CATG | 6 cut(s) | 90, 487, 658, 671, 745, 856 |
| CviQI | GTAC | 2 cut(s) | 114, 651 |
| DdeI | CTNAG | 6 cut(s) | 9, 297, 329, 528, 1033, 1197 |
| DpnI | GATC | 5 cut(s) | 294, 429, 533, 861, 872 |
| DpnII | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 884 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 884 |
| EaeI | YGGCCR | 1 cut(s) | 375 |
| Eam1104I | CTCTTC | 1 cut(s) | 1161 |
| EarI | CTCTTC | 1 cut(s) | 1161 |
| Eco105I | TACGTA | 1 cut(s) | 412 |
| Eco130I | CCWWGG | 3 cut(s) | 89, 657, 855 |
| Eco147I | AGGCCT | 1 cut(s) | 690 |
| Eco32I | GATATC | 1 cut(s) | 547 |
| Eco47I | GGWCC | 2 cut(s) | 56, 121 |
| Eco57I | CTGAAG | 2 cut(s) | 279, 1076 |
| EcoRII | CCWGG | 3 cut(s) | 288, 556, 862 |
| EcoRV | GATATC | 1 cut(s) | 547 |
| EcoT14I | CCWWGG | 3 cut(s) | 89, 657, 855 |
| ErhI | CCWWGG | 3 cut(s) | 89, 657, 855 |
| FaeI | CATG | 6 cut(s) | 93, 490, 661, 674, 748, 859 |
| FaqI | GGGAC | 1 cut(s) | 1001 |
| FatI | CATG | 6 cut(s) | 89, 486, 657, 670, 744, 855 |
| FauNDI | CATATG | 1 cut(s) | 1087 |
| Fnu4HI | GCNGC | 9 cut(s) | 63, 161, 369, 456, 726, 1212, 1293, 1296, 1299 |
| FokI | GGATG | 1 cut(s) | 1262 |
| Fsp4HI | GCNGC | 9 cut(s) | 63, 161, 369, 456, 726, 1212, 1293, 1296, 1299 |
| FspBI | CTAG | 4 cut(s) | 350, 981, 986, 1306 |
| GlaI | GCGC | 2 cut(s) | 164, 623 |
| GluI | GCNGC | 9 cut(s) | 63, 161, 369, 456, 726, 1212, 1293, 1296, 1299 |
| GsaI | CCCAGC | 1 cut(s) | 455 |
| GsuI | CTGGAG | 2 cut(s) | 699, 736 |
| HaeIII | GGCC | 4 cut(s) | 377, 449, 511, 690 |
| HapII | CCGG | 2 cut(s) | 378, 1029 |
| HgaI | GACGC | 2 cut(s) | 618, 709 |
| HhaI | GCGC | 2 cut(s) | 165, 624 |
| Hin1II | CATG | 6 cut(s) | 93, 490, 661, 674, 748, 859 |
| Hin6I | GCGC | 2 cut(s) | 163, 622 |
| HinP1I | GCGC | 2 cut(s) | 163, 622 |
| HincII | GTYRAC | 1 cut(s) | 362 |
| HindII | GTYRAC | 1 cut(s) | 362 |
| HindIII | AAGCTT | 1 cut(s) | 1174 |
| HinfI | GANTC | 4 cut(s) | 628, 644, 778, 1270 |
| HpaII | CCGG | 2 cut(s) | 378, 1029 |
| HphI | GGTGA | 4 cut(s) | 106, 316, 541, 1175 |
| Hpy166II | GTNNAC | 4 cut(s) | 230, 362, 948, 991 |
| Hpy188I | TCNGA | 4 cut(s) | 121, 187, 531, 1249 |
| Hpy188III | TCNNGA | 3 cut(s) | 745, 1103, 1144 |
| Hpy8I | GTNNAC | 4 cut(s) | 230, 362, 948, 991 |
| Hpy99I | CGWCG | 1 cut(s) | 612 |
| HpyAV | CCTTC | 4 cut(s) | 16, 295, 301, 1014 |
| HpyCH4III | ACNGT | 5 cut(s) | 73, 103, 775, 851, 1042 |
| HpyCH4IV | ACGT | 2 cut(s) | 411, 516 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 157, 263, 374, 404, 455, 1088, 1298 |
| HpyF3I | CTNAG | 6 cut(s) | 9, 297, 329, 528, 1033, 1197 |
| HpySE526I | ACGT | 2 cut(s) | 411, 516 |
| Hsp92II | CATG | 6 cut(s) | 93, 490, 661, 674, 748, 859 |
| HspAI | GCGC | 2 cut(s) | 163, 622 |
| KpnI | GGTACC | 1 cut(s) | 654 |
| Kzo9I | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| LmnI | GCTCC | 5 cut(s) | 380, 559, 961, 1132, 1306 |
| Lsp1109I | GCAGC | 9 cut(s) | 49, 147, 380, 467, 712, 1223, 1279, 1282, 1285 |
| LweI | GCATC | 3 cut(s) | 253, 500, 927 |
| MaeI | CTAG | 4 cut(s) | 350, 981, 986, 1306 |
| MaeII | ACGT | 2 cut(s) | 411, 516 |
| MaeIII | GTNAC | 4 cut(s) | 73, 1036, 1042, 1183 |
| MalI | GATC | 5 cut(s) | 294, 429, 533, 861, 872 |
| MbiI | CCGCTC | 1 cut(s) | 554 |
| MboI | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| MboII | GAAGA | 8 cut(s) | 243, 272, 398, 492, 709, 1062, 1069, 1178 |
| MfeI | CAATTG | 1 cut(s) | 941 |
| MflI | RGATCY | 3 cut(s) | 292, 531, 859 |
| MhlI | GDGCHC | 1 cut(s) | 232 |
| MluCI | AATT | 9 cut(s) | 49, 136, 247, 315, 415, 820, 941, 997, 1158 |
| MlyI | GAGTC | 2 cut(s) | 622, 1279 |
| MmeI | TCCRAC | 1 cut(s) | 1227 |
| MnlI | CCTC | 9 cut(s) | 25, 176, 275, 537, 664, 678, 917, 1226, 1297 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1175 |
| MseI | TTAA | 4 cut(s) | 246, 537, 804, 995 |
| MspA1I | CMGCKG | 1 cut(s) | 725 |
| MspCI | CTTAAG | 1 cut(s) | 536 |
| MspI | CCGG | 2 cut(s) | 378, 1029 |
| MspR9I | CCNGG | 3 cut(s) | 290, 558, 864 |
| MunI | CAATTG | 1 cut(s) | 941 |
| MvaI | CCWGG | 3 cut(s) | 290, 558, 864 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 157, 263, 374, 404, 455, 1088, 1298 |
| NcoI | CCATGG | 3 cut(s) | 89, 657, 855 |
| NdeI | CATATG | 1 cut(s) | 1087 |
| NdeII | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| NlaIII | CATG | 6 cut(s) | 93, 490, 661, 674, 748, 859 |
| NlaIV | GGNNCC | 7 cut(s) | 286, 294, 450, 652, 861, 1081, 1134 |
| NmuCI | GTSAC | 3 cut(s) | 73, 1036, 1042 |
| PagI | TCATGA | 1 cut(s) | 744 |
| PaqCI | CACCTGC | 1 cut(s) | 1067 |
| PceI | AGGCCT | 1 cut(s) | 690 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 847 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1175 |
| PfeI | GAWTC | 2 cut(s) | 644, 778 |
| PkrI | GCNGC | 9 cut(s) | 64, 162, 370, 457, 727, 1213, 1294, 1297, 1300 |
| PleI | GAGTC | 2 cut(s) | 622, 1278 |
| PpsI | GAGTC | 2 cut(s) | 622, 1278 |
| Ppu21I | YACGTR | 1 cut(s) | 412 |
| PshAI | GACNNNNGTC | 1 cut(s) | 357 |
| PsiI | TTATAA | 3 cut(s) | 221, 443, 963 |
| Psp1406I | AACGTT | 1 cut(s) | 516 |
| Psp6I | CCWGG | 3 cut(s) | 288, 556, 862 |
| PspFI | CCCAGC | 1 cut(s) | 451 |
| PspGI | CCWGG | 3 cut(s) | 288, 556, 862 |
| PspN4I | GGNNCC | 7 cut(s) | 286, 294, 450, 652, 861, 1081, 1134 |
| PspPI | GGNCC | 4 cut(s) | 56, 121, 448, 509 |
| PstI | CTGCAG | 1 cut(s) | 1078 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1019, 1040 |
| PsuI | RGATCY | 3 cut(s) | 292, 531, 859 |
| PvuII | CAGCTG | 1 cut(s) | 725 |
| RsaI | GTAC | 2 cut(s) | 115, 652 |
| RsaNI | GTAC | 2 cut(s) | 114, 651 |
| Rsr2I | CGGWCCG | 1 cut(s) | 121 |
| RsrII | CGGWCCG | 1 cut(s) | 121 |
| SaqAI | TTAA | 4 cut(s) | 246, 537, 804, 995 |
| SatI | GCNGC | 9 cut(s) | 63, 161, 369, 456, 726, 1212, 1293, 1296, 1299 |
| Sau3AI | GATC | 5 cut(s) | 292, 427, 531, 859, 870 |
| Sau96I | GGNCC | 4 cut(s) | 56, 121, 448, 509 |
| SbfI | CCTGCAGG | 1 cut(s) | 1078 |
| ScaI | AGTACT | 1 cut(s) | 115 |
| SchI | GAGTC | 2 cut(s) | 622, 1279 |
| ScrFI | CCNGG | 3 cut(s) | 290, 558, 864 |
| SdaI | CCTGCAGG | 1 cut(s) | 1078 |
| SduI | GDGCHC | 1 cut(s) | 232 |
| SfaNI | GCATC | 3 cut(s) | 253, 500, 927 |
| SfcI | CTRYAG | 2 cut(s) | 600, 1074 |
| SinI | GGWCC | 2 cut(s) | 56, 121 |
| SmlI | CTYRAG | 2 cut(s) | 167, 536 |
| SmoI | CTYRAG | 2 cut(s) | 167, 536 |
| SnaBI | TACGTA | 1 cut(s) | 412 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1078 |
| Sse9I | AATT | 9 cut(s) | 49, 136, 247, 315, 415, 820, 941, 997, 1158 |
| SseBI | AGGCCT | 1 cut(s) | 690 |
| SsiI | CCGC | 2 cut(s) | 552, 787 |
| SspMI | CTAG | 4 cut(s) | 350, 981, 986, 1306 |
| StuI | AGGCCT | 1 cut(s) | 690 |
| StyD4I | CCNGG | 3 cut(s) | 288, 556, 862 |
| StyI | CCWWGG | 3 cut(s) | 89, 657, 855 |
| TaaI | ACNGT | 5 cut(s) | 73, 103, 775, 851, 1042 |
| TaiI | ACGT | 2 cut(s) | 414, 519 |
| TaqI | TCGA | 1 cut(s) | 106 |
| TaqII | GACCGA | 2 cut(s) | 138, 621 |
| TasI | AATT | 9 cut(s) | 49, 136, 247, 315, 415, 820, 941, 997, 1158 |
| TatI | WGTACW | 1 cut(s) | 113 |
| TfiI | GAWTC | 2 cut(s) | 644, 778 |
| Tru1I | TTAA | 4 cut(s) | 246, 537, 804, 995 |
| Tru9I | TTAA | 4 cut(s) | 246, 537, 804, 995 |
| TscAI | CASTG | 4 cut(s) | 346, 438, 778, 1045 |
| TseFI | GTSAC | 3 cut(s) | 73, 1036, 1042 |
| TseI | GCWGC | 9 cut(s) | 62, 160, 368, 455, 725, 1211, 1292, 1295, 1298 |
| Tsp45I | GTSAC | 3 cut(s) | 73, 1036, 1042 |
| TspDTI | ATGAA | 2 cut(s) | 475, 710 |
| TspGWI | ACGGA | 3 cut(s) | 621, 874, 1085 |
| TspRI | CASTG | 4 cut(s) | 346, 438, 778, 1045 |
| Vha464I | CTTAAG | 1 cut(s) | 536 |
| VneI | GTGCAC | 1 cut(s) | 228 |
| VpaK11BI | GGWCC | 2 cut(s) | 56, 121 |
| XapI | RAATTY | 4 cut(s) | 49, 136, 315, 415 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1175 |
| XspI | CTAG | 4 cut(s) | 350, 981, 986, 1306 |
| ZrmI | AGTACT | 1 cut(s) | 115 |