Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000923

Physical Location & Seq

Genomic Coordinates Reverse (-)

156581 .. 160578

Gene Structure 3998 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G001800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2325 bp

ATGTGGATTGGAAAGCTTTCATGTTTTGTCCAATTAATGTTTATTCTTTCTCTGTTTCAAGTACCCGCTTTTGCAATAAAAAAGTCTTACGTAGTGTACCTGGGATCGCATGCACATGGTCCACAAGTCTCAGAAGCTGATCTTCATCGTGTGACTGATTCCCATTCTGAATTCCTCGGATCATTCCTGGGAAGTACCCAGAAAGCCAAAGAAGCAATTATTTACTCATACAAAAGGCATATCAATGGTTTTGCTGCCATCCTTGAAGATGAAGAGGCAGCTGAAATCGCAAAGCATCCAAAAGTTGTCTCAGTTTTTTTAAACCAAGGAAGACAATTACACACTACTCATTCATGGGACTTTATGTTACTGGAAAAGGATGGAGTGATCCACCCCACTTCCTTATGGAAAAGGGCCAGATTTGGTGAAGATACAATCATAGGGAATCTTGACACCGGTGTTTGGGCCGAATCAGAGAGTTTTAGTGACGAAGGGATTGGACCCATTCCAGCAAAGTGGAAAGGAATCTGCCAGAATGACACCACCGGTTTTCCTTGCAACAGGAAGCTCATCGGTGCAAGGTACTTCAACAAAGGATATGCTTCGTATGCAGGGGCGCCATTGAGGTCCTCGTTTAACAGTGCGCGAGACCATGAAGGTCATGGTTCTCACACTCTATCCACAGCAGCTGGAAACTTCGTAGCTGGAGCCAATGTGTTCGGCTTGGGGAATGGGACTGCCAAAGGTGGTTCCCCCAAAGCCCGAGTTGCTGCATATAAAGTGTGTTGGCCACCAATCAACGGCAGTGAATGCTTTGATGCTGATATCATGGCAGCCTTTGATGCAGCCATACATGATGGGGTTGATGTGCTTTCAGTCTCACTTGGTGGGGACCCTTCCAATTACTTGGATGATGGCCTTTCCATTGGGGCATTCCATGCTGTCAAGAATGGTATCGTTGTGGTATGCTCTGCAGGAAATTCTGGTCCTGCCGCTGGAACTGTCTCAAATGTTGCACCCTGGATGATAACCGTGGGAGCAAGTACCTTGGACAGAGAGTTTCAAGCTATTGTTCAACTCCGAAATGGGCTGCGTCTCAAGGGAACGAGCCTTTCTAAGCCTTTACCGGAAGACAGATTTTATCCACTTATAACTGGTGCACAAGCTAAAGCAGCTAATGCTTCTGCCCATGATGCCATGCTTTGTATAGGAGGAACACTAGACCCACAGAAGGTGAAGGGTAAGATTTTGGCCTGTCTTAGGGGTGATACTGCAAGAATAGACAAGGGTGAACAAGCAGCTCTTGCCGGAGCAGTTGGGATGATTCTTTGTAATGATAAGGCCAGTGGTAATGAAATCATTGCGGATCCTCACGTACTCCCAGCCTCGCAAATTAATTATACGGATGGCATTGCTGTAGTTTCCTACATTAATTCCACAATTGATCCACAGGGATTTATAACGCCCCCAACAGCACAGCTGAACGCAAAACCTGCTCCATTCATGGCATCCTTCTCCTCTCAAGGACCCAACACTATCACTCCTGAGATCCTTAAGCCTGATATCACTGCTCCTGGTGTAAATATCATAGCTGCCTATACCCAAGCAACCAGCCCTACCAATGAAAGCTTTGATAAGCGCAGGATTGCGTTTAACACTGAATCTGGTACCTCTATGTCGTGCCCTCATGTTTCTGGAGTTGTAGGCCTTCTGAAGACACTCTACCCTGACTGGAGTCCATCTGCAATTAGATCTGCAATCATGACAACTGCAAGAACGAGAGACAACACTGCAAATCCAATGAAGAATGCTTCATTTATTGAGGCAACGCCATTCAGTTATGGTGCGGGTCATATACGACCAAATCGCGCCATGGATCCTGGCTTGATCTATGACCTAACTGTCAATGATTACTTGGACTTTCTTTGTGCCATTGGCTATAACAAGACAATGATGCAACTCTTTTCTGAATCTCCTAATTACAAATGCCCCAAGTCAGCCAGTCTTCTGGACTTCAATTACCCTTCAATAGTGGTCCCTGAATTGTCTGGCTCAGTCACTGTGACTAGAAGGGTGAAGAATGTTGGTTCTCCTGGTACCTATGCCGTTCGTGCTCACAAACCACTTGGAGTTTCAGTTACAGTTGAGCCTAATATCTTGAAGTTTAAAAATATTGGTGAAGAAAAGAGCTTTAAGGTGACCCTCAAAGCTAAGGGACTTGGTGTAACTAAGGACTATGTATTTGGAGGCCTTATCTGGTCGGATGGCAAGCATTACGTAAGGAGTCCAATTGTAGTTTCCTCAGCTGCTGCTGCTGCTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009888 GO:0010073 GO:0010074 GO:0016787 GO:0017171 GO:0019538 GO:0019827 GO:0032501 GO:0032502 GO:0043170 GO:0044238 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0098727 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

775

Amino Acids

82.59

Weight (kDa)

8.41

Isoelectric Point (pI)

32.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59810
fragaria_vesca	FvH4_3g00161 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42041 FvH4_3g42350
malus_domestica	MD03G1039300.v1.1 MD10G1341300.v1.1 MD11G1039600.v1.1 MD14G1139100.v1.1
prunus_persica	Prupe.4G001800_v2.0.a1 Prupe.6G031400_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1
pyrus_communis	pycom03g03030 pycom11g03350 pycom11g03360 pycom11g03370 pycom17g11100
rosa_chinensis	RchiOBHm_Chr5g0000221 RchiOBHm_Chr5g0075241 RchiOBHm_Chr5g0075251
rosa_laevigata	RLG00000030851 RLG00000036541 RLG00000036542
rosa_multiflora	Rmu_co8057730.1_g000001 Rmu_co8132088.1_g000001 Rmu_sc0000770.1_g000063 Rmu_sc0021936.1_g000001 Rmu_sc0031527.1_g000001 Rmu_ssc0000243.1_g000009
rosa_roxburghii	Rroxscaffold_1G00006310 Rroxscaffold_1G00075880 Rroxscaffold_3G00267190
rosa_rugosa	Rorug04G0382600 Rorug05G0437400 Rorug05G0437500 Rorug05G0437600 Rorug05G0437700 Rorug05G0437800
rosa_samantha	Rh5AG001500 Rh5AG494500 Rh5AG494600 Rh5BG002900 Rh5BG516100 Rh5BG516200 Rh5CG001800 Rh5CG539900 Rh5CG540000 Rh5DG001700 Rh5DG528800 Rh5DG528900
rosa_wichuraiana	Rw5G000200 Rw5G045880 Rw5G045890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1151, 1460
AasI	GACNNNNNNGTC	1 cut(s)	1901
Acc36I	ACCTGC	1 cut(s)	1501
Acc65I	GGTACC	2 cut(s)	1667, 2096
AccB1I	GGYRCC	3 cut(s)	616, 1667, 2096
AccII	CGCG	2 cut(s)	646, 1869
AciI	CCGC	4 cut(s)	66, 993, 1364, 1847
AclWI	GGATC	9 cut(s)	112, 187, 382, 1361, 1374, 1439, 1543, 1871, 1884
AcoI	YGGCCR	1 cut(s)	788
AcsI	RAATTY	2 cut(s)	170, 979
AcuI	CTGAAG	1 cut(s)	1733
AcyI	GRCGYC	1 cut(s)	617
AdeI	CACNNNGTG	1 cut(s)	887
AfaI	GTAC	8 cut(s)	63, 98, 196, 584, 1045, 1377, 1669, 2098
AfiI	CCNNNNNNNGG	5 cut(s)	462, 800, 995, 1231, 1260
AflII	CTTAAG	1 cut(s)	1553
AgeI	ACCGGT	2 cut(s)	455, 545
AgsI	TTSAA	8 cut(s)	59, 266, 589, 1064, 1076, 2017, 2028, 2161
AjnI	CCWGG	6 cut(s)	99, 186, 1019, 1573, 1879, 2092
AjuI	GAANNNNNNNTTGG	2 cut(s)	2281, 2313
Alw21I	GWGCWC	2 cut(s)	1162, 2116
Alw26I	GTCTC	7 cut(s)	133, 313, 642, 883, 1009, 1100, 1776
Alw44I	GTGCAC	1 cut(s)	1158
AlwI	GGATC	9 cut(s)	112, 187, 382, 1361, 1374, 1439, 1543, 1871, 1884
AlwNI	CAGNNNCTG	4 cut(s)	137, 689, 2060, 2309
Ama87I	CYCGRG	1 cut(s)	762
AoxI	GGCC	8 cut(s)	414, 465, 788, 916, 1251, 1341, 1705, 2248
ApaLI	GTGCAC	1 cut(s)	1158
ApoI	RAATTY	2 cut(s)	170, 979
ArsI	GACNNNNNNTTYG	2 cut(s)	2225, 2257
AseI	ATTAAT	3 cut(s)	35, 1395, 1431
AsiGI	ACCGGT	2 cut(s)	455, 545
Asp700I	GAANNNNTTC	1 cut(s)	16
Asp718I	GGTACC	2 cut(s)	1667, 2096
AspLEI	GCGC	4 cut(s)	619, 646, 1641, 1871
AspS9I	GGNCC	9 cut(s)	119, 414, 465, 500, 627, 892, 986, 1526, 2035
AsuHPI	GGTGA	7 cut(s)	437, 1246, 1277, 1301, 2086, 2189, 2209
AvaI	CYCGRG	1 cut(s)	762
AvaII	GGWCC	7 cut(s)	119, 500, 627, 892, 986, 1526, 2035
BaeGI	GKGCMC	2 cut(s)	1162, 1685
BalI	TGGCCA	1 cut(s)	790
BamHI	GGATCC	2 cut(s)	1366, 1876
BanI	GGYRCC	3 cut(s)	616, 1667, 2096
BarI	GAAGNNNNNNTAC	2 cut(s)	1706, 1738
BbsI	GAAGAC	4 cut(s)	337, 1137, 1721, 1997
Bbv12I	GWGCWC	2 cut(s)	1162, 2116
BbvCI	CCTCAGC	1 cut(s)	2302
BccI	CCATC	7 cut(s)	266, 374, 851, 908, 1400, 1747, 2258
BceAI	ACGGC	2 cut(s)	817, 2090
BciT130I	CCWGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
BcoDI	GTCTC	7 cut(s)	133, 313, 642, 883, 1009, 1100, 1776
BfaI	CTAG	2 cut(s)	1220, 2067
BfmI	CTRYAG	2 cut(s)	972, 1416
BfoI	RGCGCY	1 cut(s)	620
BfrI	CTTAAG	1 cut(s)	1553
BfuAI	ACCTGC	1 cut(s)	1501
BglII	AGATCT	1 cut(s)	1751
Bme1390I	CCNGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
Bme18I	GGWCC	7 cut(s)	119, 500, 627, 892, 986, 1526, 2035
BmeT110I	CYCGRG	1 cut(s)	762
BmgT120I	GGNCC	9 cut(s)	119, 414, 465, 500, 627, 892, 986, 1526, 2035
BmrFI	CCNGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
BmsI	GCATC	6 cut(s)	304, 808, 832, 1183, 1517, 1944
BoxI	GACNNNNGTC	1 cut(s)	1734
BpiI	GAAGAC	4 cut(s)	337, 1137, 1721, 1997
BpmI	CTGGAG	3 cut(s)	726, 1716, 1753
Bpu10I	CCTNAGC	2 cut(s)	2211, 2302
BpuEI	CTTGAG	2 cut(s)	1082, 1506
BsaAI	YACGTR	3 cut(s)	91, 1375, 2278
BsaBI	GATNNNNATC	1 cut(s)	144
BsaHI	GRCGYC	1 cut(s)	617
BsaI	GGTCTC	1 cut(s)	642
BsaJI	CCNNGG	8 cut(s)	100, 175, 187, 325, 1019, 1032, 1047, 1872
BsaWI	WCCGGW	3 cut(s)	455, 545, 1126
BsaXI	ACNNNNNCTCC	6 cut(s)	699, 729, 1525, 1555, 2121, 2151
Bsc4I	CCNNNNNNNGG	5 cut(s)	462, 800, 995, 1231, 1260
Bse118I	RCCGGY	2 cut(s)	455, 545
Bse1I	ACTGG	5 cut(s)	375, 1159, 1344, 1736, 2001
Bse3DI	GCAATG	2 cut(s)	1359, 1410
Bse8I	GATNNNNATC	1 cut(s)	144
BseBI	CCWGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
BseDI	CCNNGG	8 cut(s)	100, 175, 187, 325, 1019, 1032, 1047, 1872
BseGI	GGATG	9 cut(s)	258, 295, 385, 916, 1029, 1326, 1411, 1508, 2269
BseJI	GATNNNNATC	1 cut(s)	144
BseLI	CCNNNNNNNGG	5 cut(s)	462, 800, 995, 1231, 1260
BseMI	GCAATG	2 cut(s)	1359, 1410
BseMII	CTCAG	5 cut(s)	144, 324, 1536, 2067, 2316
BseNI	ACTGG	5 cut(s)	375, 1159, 1344, 1736, 2001
BseRI	GAGGAG	1 cut(s)	1507
BseSI	GKGCMC	2 cut(s)	1162, 1685
BseYI	CCCAGC	1 cut(s)	1381
Bsh1236I	CGCG	2 cut(s)	646, 1869
BshFI	GGCC	8 cut(s)	416, 467, 790, 918, 1253, 1343, 1707, 2250
BshNI	GGYRCC	3 cut(s)	616, 1667, 2096
BshTI	ACCGGT	2 cut(s)	455, 545
BsiHKAI	GWGCWC	2 cut(s)	1162, 2116
BsiHKCI	CYCGRG	1 cut(s)	762
BsiSI	CCGG	4 cut(s)	456, 546, 1127, 1308
BslFI	GGGAC	5 cut(s)	371, 748, 905, 2021, 2229
BslI	CCNNNNNNNGG	5 cut(s)	462, 800, 995, 1231, 1260
BsmAI	GTCTC	7 cut(s)	133, 313, 642, 883, 1009, 1100, 1776
BsmBI	CGTCTC	1 cut(s)	1100
BsmFI	GGGAC	5 cut(s)	371, 748, 905, 2021, 2229
BsmI	GAATGC	3 cut(s)	815, 932, 1813
BsnI	GGCC	8 cut(s)	416, 467, 790, 918, 1253, 1343, 1707, 2250
Bso31I	GGTCTC	1 cut(s)	642
BsoBI	CYCGRG	1 cut(s)	762
Bsp1286I	GDGCHC	3 cut(s)	1162, 1685, 2116
Bsp19I	CCATGG	1 cut(s)	1872
BspACI	CCGC	4 cut(s)	66, 993, 1364, 1847
BspANI	GGCC	8 cut(s)	416, 467, 790, 918, 1253, 1343, 1707, 2250
BspCNI	CTCAG	5 cut(s)	143, 323, 1537, 2066, 2315
BspFNI	CGCG	2 cut(s)	646, 1869
BspHI	TCATGA	1 cut(s)	1761
BspMAI	CTGCAG	1 cut(s)	976
BspMI	ACCTGC	1 cut(s)	1501
BspPI	GGATC	9 cut(s)	112, 187, 382, 1361, 1374, 1439, 1543, 1871, 1884
BspT107I	GGYRCC	3 cut(s)	616, 1667, 2096
BspTI	CTTAAG	1 cut(s)	1553
BspTNI	GGTCTC	1 cut(s)	642
BsrDI	GCAATG	2 cut(s)	1359, 1410
BsrFI	RCCGGY	2 cut(s)	455, 545
BsrI	ACTGG	5 cut(s)	375, 1159, 1344, 1736, 2001
BssAI	RCCGGY	2 cut(s)	455, 545
BssECI	CCNNGG	8 cut(s)	100, 175, 187, 325, 1019, 1032, 1047, 1872
BssNI	GRCGYC	1 cut(s)	617
BssT1I	CCWWGG	3 cut(s)	325, 1047, 1872
Bst2UI	CCWGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
Bst4CI	ACNGT	6 cut(s)	641, 1003, 1033, 1903, 2062, 2143
Bst6I	CTCTTC	1 cut(s)	267
BstACI	GRCGYC	1 cut(s)	617
BstAFI	CTTAAG	1 cut(s)	1553
BstAPI	GCANNNNNTGC	5 cut(s)	810, 938, 1178, 1304, 1493
BstBAI	YACGTR	3 cut(s)	91, 1375, 2278
BstC8I	GCNNGC	2 cut(s)	111, 2270
BstDEI	CTNAG	9 cut(s)	130, 310, 1116, 1259, 1545, 2053, 2211, 2229, 2302
BstDSI	CCRYGG	2 cut(s)	1032, 1872
BstEII	GGTNACC	1 cut(s)	2197
BstENI	CCTNNNNNAGG	1 cut(s)	1258
BstF5I	GGATG	9 cut(s)	258, 295, 385, 916, 1029, 1326, 1411, 1508, 2269
BstFNI	CGCG	2 cut(s)	646, 1869
BstH2I	RGCGCY	1 cut(s)	620
BstHHI	GCGC	4 cut(s)	619, 646, 1641, 1871
BstMAI	GTCTC	7 cut(s)	133, 313, 642, 883, 1009, 1100, 1776
BstNI	CCWGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
BstNSI	RCATGY	1 cut(s)	113
BstPAI	GACNNNNGTC	1 cut(s)	1734
BstPI	GGTNACC	1 cut(s)	2197
BstSCI	CCNGG	6 cut(s)	99, 186, 1019, 1573, 1879, 2092
BstSFI	CTRYAG	2 cut(s)	972, 1416
BstSLI	GKGCMC	2 cut(s)	1162, 1685
BstSNI	TACGTA	2 cut(s)	91, 2278
BstUI	CGCG	2 cut(s)	646, 1869
BstV2I	GAAGAC	4 cut(s)	337, 1137, 1721, 1997
BstX2I	RGATCY	4 cut(s)	1366, 1548, 1751, 1876
BstXI	CCANNNNNNTGG	3 cut(s)	516, 907, 2008
BstYI	RGATCY	4 cut(s)	1366, 1548, 1751, 1876
BsuRI	GGCC	8 cut(s)	416, 467, 790, 918, 1253, 1343, 1707, 2250
BtgI	CCRYGG	2 cut(s)	1032, 1872
BtsCI	GGATG	9 cut(s)	258, 295, 385, 916, 1029, 1326, 1411, 1508, 2269
BtsI	GCAGTG	3 cut(s)	811, 1566, 1788
BtsIMutI	CAGTG	7 cut(s)	646, 811, 1351, 1566, 1656, 1788, 2058
BveI	ACCTGC	1 cut(s)	1501
Cac8I	GCNNGC	2 cut(s)	111, 2270
CaiI	CAGNNNCTG	4 cut(s)	137, 689, 2060, 2309
CciI	TCATGA	1 cut(s)	1761
CfoI	GCGC	4 cut(s)	619, 646, 1641, 1871
Cfr10I	RCCGGY	2 cut(s)	455, 545
Cfr13I	GGNCC	9 cut(s)	119, 414, 465, 500, 627, 892, 986, 1526, 2035
CseI	GACGC	1 cut(s)	1082
Csp6I	GTAC	8 cut(s)	62, 97, 195, 583, 1044, 1376, 1668, 2097
CspAI	ACCGGT	2 cut(s)	455, 545
CviQI	GTAC	8 cut(s)	62, 97, 195, 583, 1044, 1376, 1668, 2097
DdeI	CTNAG	9 cut(s)	130, 310, 1116, 1259, 1545, 2053, 2211, 2229, 2302
DinI	GGCGCC	1 cut(s)	618
DraI	TTTAAA	2 cut(s)	321, 2167
DraIII	CACNNNGTG	1 cut(s)	887
DrdI	GACNNNNNNGTC	1 cut(s)	1901
DseDI	GACNNNNNNGTC	1 cut(s)	1901
EaeI	YGGCCR	1 cut(s)	788
Eam1104I	CTCTTC	1 cut(s)	267
EarI	CTCTTC	1 cut(s)	267
Eco105I	TACGTA	2 cut(s)	91, 2278
Eco130I	CCWWGG	3 cut(s)	325, 1047, 1872
Eco147I	AGGCCT	2 cut(s)	1707, 2250
Eco31I	GGTCTC	1 cut(s)	642
Eco32I	GATATC	2 cut(s)	826, 1564
Eco47I	GGWCC	7 cut(s)	119, 500, 627, 892, 986, 1526, 2035
Eco57I	CTGAAG	1 cut(s)	1733
Eco88I	CYCGRG	1 cut(s)	762
Eco91I	GGTNACC	1 cut(s)	2197
EcoNI	CCTNNNNNAGG	1 cut(s)	1258
EcoO109I	RGGNCCY	3 cut(s)	627, 892, 1526
EcoO65I	GGTNACC	1 cut(s)	2197
EcoRI	GAATTC	1 cut(s)	170
EcoRII	CCWGG	6 cut(s)	99, 186, 1019, 1573, 1879, 2092
EcoRV	GATATC	2 cut(s)	826, 1564
EcoT14I	CCWWGG	3 cut(s)	325, 1047, 1872
EgeI	GGCGCC	1 cut(s)	618
EheI	GGCGCC	1 cut(s)	618
ErhI	CCWWGG	3 cut(s)	325, 1047, 1872
Esp3I	CGTCTC	1 cut(s)	1100
FalI	AAGNNNNNCTT	4 cut(s)	126, 158, 1287, 1319
FaqI	GGGAC	5 cut(s)	371, 748, 905, 2021, 2229
FauI	CCCGC	2 cut(s)	73, 1840
FokI	GGATG	9 cut(s)	245, 282, 392, 923, 1036, 1333, 1418, 1495, 2276
FspBI	CTAG	2 cut(s)	1220, 2067
GlaI	GCGC	4 cut(s)	618, 645, 1640, 1870
GsaI	CCCAGC	1 cut(s)	1385
GsuI	CTGGAG	3 cut(s)	726, 1716, 1753
HaeII	RGCGCY	1 cut(s)	620
HaeIII	GGCC	8 cut(s)	416, 467, 790, 918, 1253, 1343, 1707, 2250
HapII	CCGG	4 cut(s)	456, 546, 1127, 1308
HgaI	GACGC	1 cut(s)	1082
HhaI	GCGC	4 cut(s)	619, 646, 1641, 1871
Hin1I	GRCGYC	1 cut(s)	617
Hin6I	GCGC	4 cut(s)	617, 644, 1639, 1869
HinP1I	GCGC	4 cut(s)	617, 644, 1639, 1869
HindIII	AAGCTT	2 cut(s)	14, 1627
HinfI	GANTC	9 cut(s)	158, 445, 470, 525, 1324, 1661, 1735, 1970, 2284
HpaII	CCGG	4 cut(s)	456, 546, 1127, 1308
HphI	GGTGA	7 cut(s)	437, 1246, 1277, 1301, 2086, 2189, 2209
Hpy166II	GTNNAC	4 cut(s)	97, 122, 1160, 1292
Hpy188I	TCNGA	8 cut(s)	133, 169, 179, 475, 1082, 1713, 1969, 2263
Hpy188III	TCNNGA	7 cut(s)	449, 946, 1544, 1695, 1762, 2009, 2158
Hpy8I	GTNNAC	4 cut(s)	97, 122, 1160, 1292
HpyAV	CCTTC	9 cut(s)	485, 650, 906, 1225, 1231, 1522, 1718, 2034, 2064
HpyCH4III	ACNGT	6 cut(s)	641, 1003, 1033, 1903, 2062, 2143
HpyCH4IV	ACGT	3 cut(s)	90, 1374, 2277
HpyF3I	CTNAG	9 cut(s)	130, 310, 1116, 1259, 1545, 2053, 2211, 2229, 2302
HpySE526I	ACGT	3 cut(s)	90, 1374, 2277
Hsp92I	GRCGYC	1 cut(s)	617
HspAI	GCGC	4 cut(s)	617, 644, 1639, 1869
KasI	GGCGCC	1 cut(s)	616
KflI	GGGWCCC	1 cut(s)	892
KpnI	GGTACC	2 cut(s)	1671, 2100
LmnI	GCTCC	5 cut(s)	707, 1037, 1310, 1501, 1576
LweI	GCATC	6 cut(s)	304, 808, 832, 1183, 1517, 1944
MaeI	CTAG	2 cut(s)	1220, 2067
MaeII	ACGT	3 cut(s)	90, 1374, 2277
MaeIII	GTNAC	8 cut(s)	151, 366, 485, 2056, 2062, 2137, 2197, 2224
MfeI	CAATTG	2 cut(s)	1440, 2289
MflI	RGATCY	4 cut(s)	1366, 1548, 1751, 1876
MhlI	GDGCHC	3 cut(s)	1162, 1685, 2116
MlsI	TGGCCA	1 cut(s)	790
MluNI	TGGCCA	1 cut(s)	790
Mly113I	GGCGCC	1 cut(s)	617
MlyI	GAGTC	2 cut(s)	1744, 2293
MmeI	TCCRAC	1 cut(s)	2241
Mox20I	TGGCCA	1 cut(s)	790
MroXI	GAANNNNTTC	1 cut(s)	16
MscI	TGGCCA	1 cut(s)	790
MseI	TTAA	9 cut(s)	35, 320, 636, 1395, 1431, 1554, 1653, 2166, 2193
MslI	CAYNNNNRTG	2 cut(s)	114, 243
Msp20I	TGGCCA	1 cut(s)	790
MspA1I	CMGCKG	5 cut(s)	281, 689, 995, 1480, 2306
MspCI	CTTAAG	1 cut(s)	1553
MspI	CCGG	4 cut(s)	456, 546, 1127, 1308
MspR9I	CCNGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
MunI	CAATTG	2 cut(s)	1440, 2289
Mva1269I	GAATGC	3 cut(s)	815, 932, 1813
MvaI	CCWGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
MvnI	CGCG	2 cut(s)	646, 1869
NarI	GGCGCC	1 cut(s)	617
NcoI	CCATGG	1 cut(s)	1872
NmuCI	GTSAC	5 cut(s)	151, 485, 2056, 2062, 2197
NspI	RCATGY	1 cut(s)	113
PaeI	GCATGC	1 cut(s)	113
PagI	TCATGA	1 cut(s)	1761
PceI	AGGCCT	2 cut(s)	1707, 2250
PctI	GAATGC	3 cut(s)	815, 932, 1813
PdmI	GAANNNNTTC	1 cut(s)	16
PfeI	GAWTC	7 cut(s)	158, 445, 470, 525, 1324, 1661, 1970
PinAI	ACCGGT	2 cut(s)	455, 545
PleI	GAGTC	2 cut(s)	1743, 2292
PluTI	GGCGCC	1 cut(s)	620
PpsI	GAGTC	2 cut(s)	1743, 2292
Ppu21I	YACGTR	3 cut(s)	91, 1375, 2278
PpuMI	RGGWCCY	3 cut(s)	627, 892, 1526
PshAI	GACNNNNGTC	1 cut(s)	1734
PshBI	ATTAAT	3 cut(s)	35, 1395, 1431
PsiI	TTATAA	2 cut(s)	1151, 1460
Psp5II	RGGWCCY	3 cut(s)	627, 892, 1526
Psp6I	CCWGG	6 cut(s)	99, 186, 1019, 1573, 1879, 2092
PspEI	GGTNACC	1 cut(s)	2197
PspFI	CCCAGC	1 cut(s)	1381
PspGI	CCWGG	6 cut(s)	99, 186, 1019, 1573, 1879, 2092
PspPI	GGNCC	9 cut(s)	119, 414, 465, 500, 627, 892, 986, 1526, 2035
PspPPI	RGGWCCY	3 cut(s)	627, 892, 1526
PstI	CTGCAG	1 cut(s)	976
PstNI	CAGNNNCTG	4 cut(s)	137, 689, 2060, 2309
PsuI	RGATCY	4 cut(s)	1366, 1548, 1751, 1876
PvuII	CAGCTG	4 cut(s)	281, 689, 1480, 2306
RsaI	GTAC	8 cut(s)	63, 98, 196, 584, 1045, 1377, 1669, 2098
RsaNI	GTAC	8 cut(s)	62, 97, 195, 583, 1044, 1376, 1668, 2097
RseI	CAYNNNNRTG	2 cut(s)	114, 243
SaqAI	TTAA	9 cut(s)	35, 320, 636, 1395, 1431, 1554, 1653, 2166, 2193
Sau96I	GGNCC	9 cut(s)	119, 414, 465, 500, 627, 892, 986, 1526, 2035
SchI	GAGTC	2 cut(s)	1744, 2293
ScrFI	CCNGG	6 cut(s)	101, 188, 1021, 1575, 1881, 2094
SduI	GDGCHC	3 cut(s)	1162, 1685, 2116
SfaNI	GCATC	6 cut(s)	304, 808, 832, 1183, 1517, 1944
SfcI	CTRYAG	2 cut(s)	972, 1416
SfoI	GGCGCC	1 cut(s)	618
SgrAI	CRCCGGYG	1 cut(s)	455
SinI	GGWCC	7 cut(s)	119, 500, 627, 892, 986, 1526, 2035
SmiMI	CAYNNNNRTG	2 cut(s)	114, 243
SmlI	CTYRAG	3 cut(s)	1097, 1521, 1553
SmoI	CTYRAG	3 cut(s)	1097, 1521, 1553
SnaBI	TACGTA	2 cut(s)	91, 2278
SphI	GCATGC	1 cut(s)	113
SseBI	AGGCCT	2 cut(s)	1707, 2250
SsiI	CCGC	4 cut(s)	66, 993, 1364, 1847
SspDI	GGCGCC	1 cut(s)	616
SspI	AATATT	1 cut(s)	2173
SspMI	CTAG	2 cut(s)	1220, 2067
StuI	AGGCCT	2 cut(s)	1707, 2250
StyD4I	CCNGG	6 cut(s)	99, 186, 1019, 1573, 1879, 2092
StyI	CCWWGG	3 cut(s)	325, 1047, 1872
TaaI	ACNGT	6 cut(s)	641, 1003, 1033, 1903, 2062, 2143
TaiI	ACGT	3 cut(s)	93, 1377, 2280
TauI	GCSGC	1 cut(s)	995
TfiI	GAWTC	7 cut(s)	158, 445, 470, 525, 1324, 1661, 1970
Tru1I	TTAA	9 cut(s)	35, 320, 636, 1395, 1431, 1554, 1653, 2166, 2193
Tru9I	TTAA	9 cut(s)	35, 320, 636, 1395, 1431, 1554, 1653, 2166, 2193
TscAI	CASTG	7 cut(s)	646, 811, 1351, 1573, 1663, 1795, 2065
TseFI	GTSAC	5 cut(s)	151, 485, 2056, 2062, 2197
Tsp45I	GTSAC	5 cut(s)	151, 485, 2056, 2062, 2197
TspGWI	ACGGA	1 cut(s)	1418
TspRI	CASTG	7 cut(s)	646, 811, 1351, 1573, 1663, 1795, 2065
Vha464I	CTTAAG	1 cut(s)	1553
VneI	GTGCAC	1 cut(s)	1158
VpaK11BI	GGWCC	7 cut(s)	119, 500, 627, 892, 986, 1526, 2035
VspI	ATTAAT	3 cut(s)	35, 1395, 1431
XagI	CCTNNNNNAGG	1 cut(s)	1258
XapI	RAATTY	2 cut(s)	170, 979
XceI	RCATGY	1 cut(s)	113
XcmI	CCANNNNNNNNNTGG	1 cut(s)	659
XmnI	GAANNNNTTC	1 cut(s)	16
XspI	CTAG	2 cut(s)	1220, 2067

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.