Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000923

Physical Location & Seq

Genomic Coordinates Reverse (-)

159466 .. 163643

Gene Structure 4178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ28179

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGTATTTGTATCTGGGATCCCATGCACATGGTCCACAAGTCTTAGAAGCTGATCGTGAACGTGCAACTGATTCGCATTATGAATTCCTCGGATCATTCTTGGGAAGCACTGACAAAGCGAAGGAAGCGATTATTTACTCGTACAATAGATATATCAATGGTTTTGCTGCCACCCTTGAAGAGGAAGAGGCAGCTGAAATTGCAAAGCATCCAAACGTTGTCTCAGTTTTCTTAAACCAAGGAATAAAATTGCATACAACCCATTCATGGAATTTTATGCTACTGGAAAGGAACGGAGTAATTCACCCCAGTTCTATATGGAAGAAGGCCAGATTTGGGGAAGATACGATCATAGCCAATCTTGACACTGGTGTGTGGCCCGAATCGGAGAGCTTTAGTGACAAAGGGTTTGGACCCATTCCATCAAGGTGGAAAGGAATCTGTCAGAACGATACCACTGGGTTTTCCTGCAACAGGAAGCTCATCGGAGCAAGGTACTTCAATAAAGGACATGCTGCACTGGCAGGGCCAGTACTCGACCCTTATGTTTACTCTGCACGAGACTTAAACGGTCATGGCTCTCACACTCTATCGACAGCAGGTGGGAACTTTGTTCCTGGAGCTAGTGTGTTTGGCGTGGGGAATGGGACTGCCAAAGGTGGCTCCCCCAAGGCCCGAGTTGCTGCTTATAAAGTGTGCTGGCCAGAATTTGGCAGTGAGTGCTCTGATGCTGACATCTTGGCAGCGTTTGATGAAGCAATACATGACGGGGTTGATGTGATTTCAGTTTCACTTGGTGTCGACCACCCTCAAAATTACTTTGAGGATGGCGCTGCAATTGGGGCATTCCATGCTGTCAAGCATGGTATAGTTGTTGTATGCTCAGCAGGAAATTCTGGTCATTATGCTGGAACTGTCACAAATGTTGCACCATGGATAATAACCGTTGGAGCAAGTACTTTGGATCGAGAGTTTGAAGCTTTTGTTGAACTCCGTAATGGGCTGCGCCTCAAGGGAAGAAGCCTTTCTAAACCTTTGCCAGATGACATACTTTATCCACTTATAACTGGTGCACAAGCCAAAGCTGTCAATTCTTCTGCTGAAGATGCGATGCTTTGTCTTAGAGGAACTCTGGATCCTAAGAAGGTGAAGGGCAAAATTTTGGTCTGTCGTAGGGGTATCAGTCCAAGACTAGACAAGGGTCAACAAGCAGCTCTGGCCGGAGCAGTTGGGATGATTCTTTGTAATGATGAGGCCAGTGGTAATGTACTCTCTGATGATTATCACGTACTACCAGCTTCAAACATTAATTATAAAGATGGGGTTGCTGTCTTTGCCTACATAAATTCAACAGATGATCCATTGGGATTTATAACGGCCCCAACAGCACAGCTGAATAGAAAACCTGCTCCATTCATGGCAGCTTTCTCCTCGCAAGGGCCAAACATGCTCACTCCTCAGATCCTTAAGCCTGATATCACTGCTCCTGGTGTAAATATCATAGCTGCATACACCCAAGCAAAAAGCCCTACAGGACAAAGCTATGATAAACGCAGGATTCCGTTTGTTACTGAATCTGGCACCTCCATGTCTTGCCCTCATGTAGCTGGAGTTGTAGGCCTTCTGAAGACGCTCTACCCTGACTGGAGTTCATCTGCAATAAAATCTGCAATCATGACAACTGCAAGAACGAGGGACAACACTGTGAATCCAATGCGGAATGGCTCGTTCATTAAAGCAACGCCATTCAATTATGGGCATGGTCATATAAGACCAAATCGTGCCATGGATCCTGGCTTGATCTATGACCTAAACATCAATGATTACCTAGACTTTCTTTGTGTCATTGGCTATAACAAGACAATGATGCAACTTTTCTCTGAAGCTCCTTATAAATGCCCCAGGTCAGCCAGTCTTGTTGACTTCAATTACCCTTCAATAACAGTCCCTGATTTGTCTGGCTCAGTCACTGTGACAAGAAGAGTGAAGAATGTTGGTTCTCCTAGAGGGGCCACATATGCAGTCCGAATTCGCGAACCAGTTGGAATTTCAGTATCAGTGGAGCCTAATATCTTGAAGTTCAATAAAATAGGTGAAGAGAAAAGTTTCAAGGTAACCCTGAAAGCTAAGAGACCTGGTGCAGCTAAGAACTATGTGTTTGGAGGGCTTATTTGGTCGGATGGCAAACACTATGTAAGGAGTCCAATAGTAGTTTCCTCTGCTGCTGGTGCTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009888 GO:0010073 GO:0010074 GO:0016787 GO:0017171 GO:0019538 GO:0019827 GO:0032501 GO:0032502 GO:0043170 GO:0044238 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0098727 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

745

Amino Acids

80.24

Weight (kDa)

8.71

Isoelectric Point (pI)

32.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	4 - 85	1.2e-14	Peptidase inhibitor I9
Peptidase_S8	PF00082	113 - 573	2.9e-43	Subtilase family
PA	PF02225	370 - 443	1.5e-12	PA domain
fn3_6	PF17766	641 - 738	3.2e-31	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59810
fragaria_vesca	FvH4_3g00161 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42041 FvH4_3g42350
malus_domestica	MD03G1039300.v1.1 MD10G1341300.v1.1 MD11G1039600.v1.1 MD14G1139100.v1.1
prunus_persica	Prupe.4G001800_v2.0.a1 Prupe.6G031400_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1
pyrus_communis	pycom03g03030 pycom11g03350 pycom11g03360 pycom11g03370 pycom17g11100
rosa_chinensis	RchiOBHm_Chr5g0000221 RchiOBHm_Chr5g0075241 RchiOBHm_Chr5g0075251
rosa_laevigata	RLG00000030851 RLG00000036541 RLG00000036542
rosa_multiflora	Rmu_co8057730.1_g000001 Rmu_co8132088.1_g000001 Rmu_sc0000770.1_g000063 Rmu_sc0021936.1_g000001 Rmu_sc0031527.1_g000001 Rmu_ssc0000243.1_g000009
rosa_roxburghii	Rroxscaffold_1G00006310 Rroxscaffold_1G00075880 Rroxscaffold_3G00267190
rosa_rugosa	Rorug04G0382600 Rorug05G0437400 Rorug05G0437500 Rorug05G0437600 Rorug05G0437700 Rorug05G0437800
rosa_samantha	Rh5AG001500 Rh5AG494500 Rh5AG494600 Rh5BG002900 Rh5BG516100 Rh5BG516200 Rh5CG001800 Rh5CG539900 Rh5CG540000 Rh5DG001700 Rh5DG528800 Rh5DG528900
rosa_wichuraiana	Rw5G000200 Rw5G045880 Rw5G045890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	5 cut(s)	690, 1064, 1314, 1373, 1893
AarI	CACCTGC	1 cut(s)	590
Acc36I	ACCTGC	2 cut(s)	590, 1414
AccB1I	GGYRCC	1 cut(s)	1580
AccB7I	CCANNNNNTGG	1 cut(s)	710
AccI	GTMKAC	1 cut(s)	801
AccII	CGCG	1 cut(s)	2034
AciI	CCGC	1 cut(s)	1717
AclI	AACGTT	1 cut(s)	216
AcoI	YGGCCR	2 cut(s)	701, 1218
AcsI	RAATTY	8 cut(s)	83, 271, 707, 892, 1158, 1345, 2028, 2046
AcuI	CTGAAG	3 cut(s)	1122, 1646, 1902
AdeI	CACNNNGTG	1 cut(s)	797
AfaI	GTAC	6 cut(s)	143, 497, 534, 958, 1269, 1290
AfiI	CCNNNNNNNGG	6 cut(s)	181, 267, 336, 474, 710, 1437
AflII	CTTAAG	1 cut(s)	1466
AjnI	CCWGG	5 cut(s)	616, 1486, 1792, 1901, 2134
AjuI	GAANNNNNNNTTGG	2 cut(s)	2197, 2229
AleI	CACNNNNGTG	1 cut(s)	371
AloI	GAACNNNNNNTCC	2 cut(s)	1120, 1152
Alw21I	GWGCWC	2 cut(s)	725, 1075
Alw26I	GTCTC	3 cut(s)	226, 555, 2125
Alw44I	GTGCAC	1 cut(s)	1071
AlwNI	CAGNNNCTG	2 cut(s)	1949, 1970
Ama87I	CYCGRG	1 cut(s)	675
ApaLI	GTGCAC	1 cut(s)	1071
ApoI	RAATTY	8 cut(s)	83, 271, 707, 892, 1158, 1345, 2028, 2046
ArsI	GACNNNNNNTTYG	4 cut(s)	392, 424, 1149, 1181
AseI	ATTAAT	1 cut(s)	1308
Asp700I	GAANNNNTTC	2 cut(s)	1024, 2105
AspLEI	GCGC	2 cut(s)	833, 1008
AspS9I	GGNCC	8 cut(s)	32, 378, 413, 527, 673, 1378, 1439, 2010
AsuHPI	GGTGA	3 cut(s)	296, 1159, 2105
AvaI	CYCGRG	1 cut(s)	675
AvaII	GGWCC	2 cut(s)	32, 413
BaeGI	GKGCMC	1 cut(s)	1075
BalI	TGGCCA	1 cut(s)	703
BamHI	GGATCC	3 cut(s)	17, 1135, 1789
BanI	GGYRCC	1 cut(s)	1580
BarI	GAAGNNNNNNTAC	2 cut(s)	1619, 1651
BauI	CACGAG	1 cut(s)	558
BbsI	GAAGAC	1 cut(s)	1634
Bbv12I	GWGCWC	2 cut(s)	725, 1075
BccI	CCATC	4 cut(s)	430, 821, 1313, 2174
BceAI	ACGGC	1 cut(s)	1392
BcgI	CGANNNNNNTGC	2 cut(s)	54, 88
BciT130I	CCWGG	5 cut(s)	618, 1488, 1794, 1903, 2136
BcoDI	GTCTC	3 cut(s)	226, 555, 2125
BfaI	CTAG	4 cut(s)	624, 1193, 1829, 2004
BfmI	CTRYAG	1 cut(s)	1530
BfoI	RGCGCY	1 cut(s)	834
BfrI	CTTAAG	1 cut(s)	1466
BfuAI	ACCTGC	2 cut(s)	590, 1414
BlpI	GCTNAGC	1 cut(s)	883
BmcAI	AGTACT	2 cut(s)	534, 958
Bme1390I	CCNGG	5 cut(s)	618, 1488, 1794, 1903, 2136
Bme18I	GGWCC	2 cut(s)	32, 413
BmeT110I	CYCGRG	1 cut(s)	675
BmgT120I	GGNCC	8 cut(s)	32, 378, 413, 527, 673, 1378, 1439, 2010
BmiI	GGNNCC	9 cut(s)	19, 415, 664, 1137, 1380, 1582, 1791, 2011, 2064
BmrFI	CCNGG	5 cut(s)	618, 1488, 1794, 1903, 2136
BmrI	ACTGGG	2 cut(s)	303, 468
BmsI	GCATC	5 cut(s)	217, 718, 1096, 1101, 1857
BmuI	ACTGGG	2 cut(s)	303, 468
BoxI	GACNNNNGTC	1 cut(s)	1200
BpiI	GAAGAC	1 cut(s)	1634
BpmI	CTGGAG	3 cut(s)	639, 1629, 1666
Bpu1102I	GCTNAGC	1 cut(s)	883
BpuEI	CTTGAG	1 cut(s)	995
BsaAI	YACGTR	1 cut(s)	1288
BsaBI	GATNNNNATC	1 cut(s)	1281
BsaI	GGTCTC	1 cut(s)	2125
BsaJI	CCNNGG	6 cut(s)	88, 238, 669, 932, 1785, 1901
BsaXI	ACNNNNNCTCC	2 cut(s)	612, 642
Bsc4I	CCNNNNNNNGG	6 cut(s)	181, 267, 336, 474, 710, 1437
Bse8I	GATNNNNATC	1 cut(s)	1281
BseBI	CCWGG	5 cut(s)	618, 1488, 1794, 1903, 2136
BseDI	CCNNGG	6 cut(s)	88, 238, 669, 932, 1785, 1901
BseGI	GGATG	4 cut(s)	208, 832, 1239, 2185
BseJI	GATNNNNATC	1 cut(s)	1281
BseLI	CCNNNNNNNGG	6 cut(s)	181, 267, 336, 474, 710, 1437
BseMII	CTCAG	4 cut(s)	237, 897, 1472, 1977
BseRI	GAGGAG	2 cut(s)	1420, 1446
BseSI	GKGCMC	1 cut(s)	1075
BsgI	GTGCAG	3 cut(s)	501, 540, 2160
Bsh1236I	CGCG	1 cut(s)	2034
BshNI	GGYRCC	1 cut(s)	1580
BsiHKAI	GWGCWC	2 cut(s)	725, 1075
BsiHKCI	CYCGRG	1 cut(s)	675
BsiSI	CCGG	1 cut(s)	1221
BslFI	GGGAC	3 cut(s)	661, 1709, 1931
BslI	CCNNNNNNNGG	6 cut(s)	181, 267, 336, 474, 710, 1437
BsmAI	GTCTC	3 cut(s)	226, 555, 2125
BsmFI	GGGAC	3 cut(s)	661, 1709, 1931
BsmI	GAATGC	1 cut(s)	845
Bso31I	GGTCTC	1 cut(s)	2125
BsoBI	CYCGRG	1 cut(s)	675
Bsp1286I	GDGCHC	2 cut(s)	725, 1075
Bsp1720I	GCTNAGC	1 cut(s)	883
Bsp19I	CCATGG	2 cut(s)	932, 1785
Bsp68I	TCGCGA	1 cut(s)	2034
BspACI	CCGC	1 cut(s)	1717
BspCNI	CTCAG	4 cut(s)	236, 896, 1471, 1976
BspFNI	CGCG	1 cut(s)	2034
BspHI	TCATGA	1 cut(s)	1674
BspLI	GGNNCC	9 cut(s)	19, 415, 664, 1137, 1380, 1582, 1791, 2011, 2064
BspMI	ACCTGC	2 cut(s)	590, 1414
BspT107I	GGYRCC	1 cut(s)	1580
BspTI	CTTAAG	1 cut(s)	1466
BspTNI	GGTCTC	1 cut(s)	2125
BssECI	CCNNGG	6 cut(s)	88, 238, 669, 932, 1785, 1901
BssSI	CACGAG	1 cut(s)	558
BssT1I	CCWWGG	4 cut(s)	238, 669, 932, 1785
Bst2BI	CACGAG	1 cut(s)	558
Bst2UI	CCWGG	5 cut(s)	618, 1488, 1794, 1903, 2136
Bst4CI	ACNGT	6 cut(s)	572, 916, 946, 1705, 1945, 1972
Bst6I	CTCTTC	4 cut(s)	174, 180, 1975, 2091
BstAFI	CTTAAG	1 cut(s)	1466
BstAPI	GCANNNNNTGC	2 cut(s)	720, 851
BstBAI	YACGTR	1 cut(s)	1288
BstC8I	GCNNGC	1 cut(s)	701
BstDEI	CTNAG	9 cut(s)	43, 223, 883, 1121, 1140, 1458, 1963, 2127, 2145
BstDSI	CCRYGG	2 cut(s)	932, 1785
BstEII	GGTNACC	1 cut(s)	2113
BstENI	CCTNNNNNAGG	2 cut(s)	179, 472
BstF5I	GGATG	4 cut(s)	208, 832, 1239, 2185
BstFNI	CGCG	1 cut(s)	2034
BstH2I	RGCGCY	1 cut(s)	834
BstHHI	GCGC	2 cut(s)	833, 1008
BstMAI	GTCTC	3 cut(s)	226, 555, 2125
BstNI	CCWGG	5 cut(s)	618, 1488, 1794, 1903, 2136
BstNSI	RCATGY	2 cut(s)	515, 1450
BstPAI	GACNNNNGTC	1 cut(s)	1200
BstPI	GGTNACC	1 cut(s)	2113
BstSCI	CCNGG	5 cut(s)	616, 1486, 1792, 1901, 2134
BstSFI	CTRYAG	1 cut(s)	1530
BstSLI	GKGCMC	1 cut(s)	1075
BstUI	CGCG	1 cut(s)	2034
BstV2I	GAAGAC	1 cut(s)	1634
BstX2I	RGATCY	4 cut(s)	17, 1135, 1461, 1789
BstXI	CCANNNNNNTGG	2 cut(s)	29, 429
BstYI	RGATCY	4 cut(s)	17, 1135, 1461, 1789
BtgI	CCRYGG	2 cut(s)	932, 1785
BtgZI	GCGATG	1 cut(s)	1124
BtsCI	GGATG	4 cut(s)	208, 832, 1239, 2185
BtsI	GCAGTG	2 cut(s)	721, 1479
BtuMI	TCGCGA	1 cut(s)	2034
BveI	ACCTGC	2 cut(s)	590, 1414
Cac8I	GCNNGC	1 cut(s)	701
CaiI	CAGNNNCTG	2 cut(s)	1949, 1970
CciI	TCATGA	1 cut(s)	1674
CfoI	GCGC	2 cut(s)	833, 1008
Cfr13I	GGNCC	8 cut(s)	32, 378, 413, 527, 673, 1378, 1439, 2010
CseI	GACGC	1 cut(s)	1639
CsiI	ACCWGGT	1 cut(s)	2134
Csp6I	GTAC	6 cut(s)	142, 496, 533, 957, 1268, 1289
CviQI	GTAC	6 cut(s)	142, 496, 533, 957, 1268, 1289
DdeI	CTNAG	9 cut(s)	43, 223, 883, 1121, 1140, 1458, 1963, 2127, 2145
DraIII	CACNNNGTG	1 cut(s)	797
EaeI	YGGCCR	2 cut(s)	701, 1218
Eam1104I	CTCTTC	4 cut(s)	174, 180, 1975, 2091
EarI	CTCTTC	4 cut(s)	174, 180, 1975, 2091
Eco130I	CCWWGG	4 cut(s)	238, 669, 932, 1785
Eco147I	AGGCCT	1 cut(s)	1620
Eco31I	GGTCTC	1 cut(s)	2125
Eco32I	GATATC	1 cut(s)	1477
Eco47I	GGWCC	2 cut(s)	32, 413
Eco57I	CTGAAG	3 cut(s)	1122, 1646, 1902
Eco88I	CYCGRG	1 cut(s)	675
Eco91I	GGTNACC	1 cut(s)	2113
EcoNI	CCTNNNNNAGG	2 cut(s)	179, 472
EcoO65I	GGTNACC	1 cut(s)	2113
EcoRI	GAATTC	2 cut(s)	83, 2028
EcoRII	CCWGG	5 cut(s)	616, 1486, 1792, 1901, 2134
EcoRV	GATATC	1 cut(s)	1477
EcoT14I	CCWWGG	4 cut(s)	238, 669, 932, 1785
ErhI	CCWWGG	4 cut(s)	238, 669, 932, 1785
FaqI	GGGAC	3 cut(s)	661, 1709, 1931
FauNDI	CATATG	1 cut(s)	2017
FblI	GTMKAC	1 cut(s)	801
FokI	GGATG	4 cut(s)	195, 839, 1246, 2192
FspBI	CTAG	4 cut(s)	624, 1193, 1829, 2004
GlaI	GCGC	2 cut(s)	832, 1007
GsuI	CTGGAG	3 cut(s)	639, 1629, 1666
HaeII	RGCGCY	1 cut(s)	834
HapII	CCGG	1 cut(s)	1221
HgaI	GACGC	1 cut(s)	1639
HhaI	GCGC	2 cut(s)	833, 1008
Hin6I	GCGC	2 cut(s)	831, 1006
HinP1I	GCGC	2 cut(s)	831, 1006
HincII	GTYRAC	3 cut(s)	802, 1205, 1921
HindII	GTYRAC	3 cut(s)	802, 1205, 1921
HindIII	AAGCTT	1 cut(s)	978
HinfI	GANTC	8 cut(s)	71, 383, 438, 1237, 1558, 1574, 1708, 2200
HpaII	CCGG	1 cut(s)	1221
HphI	GGTGA	3 cut(s)	296, 1159, 2105
Hpy166II	GTNNAC	7 cut(s)	35, 59, 550, 802, 1073, 1205, 1921
Hpy188III	TCNNGA	7 cut(s)	56, 362, 968, 1133, 1675, 2033, 2074
Hpy8I	GTNNAC	7 cut(s)	35, 59, 550, 802, 1073, 1205, 1921
HpyAV	CCTTC	6 cut(s)	115, 319, 1138, 1144, 1631, 1944
HpyCH4III	ACNGT	6 cut(s)	572, 916, 946, 1705, 1945, 1972
HpyCH4IV	ACGT	3 cut(s)	61, 216, 1287
HpyF3I	CTNAG	9 cut(s)	43, 223, 883, 1121, 1140, 1458, 1963, 2127, 2145
HpySE526I	ACGT	3 cut(s)	61, 216, 1287
HspAI	GCGC	2 cut(s)	831, 1006
LmnI	GCTCC	9 cut(s)	488, 620, 668, 950, 1223, 1414, 1489, 1891, 2062
LweI	GCATC	5 cut(s)	217, 718, 1096, 1101, 1857
MabI	ACCWGGT	1 cut(s)	2134
MaeI	CTAG	4 cut(s)	624, 1193, 1829, 2004
MaeII	ACGT	3 cut(s)	61, 216, 1287
MaeIII	GTNAC	6 cut(s)	398, 916, 1567, 1966, 1972, 2113
MfeI	CAATTG	1 cut(s)	837
MflI	RGATCY	4 cut(s)	17, 1135, 1461, 1789
MhlI	GDGCHC	2 cut(s)	725, 1075
MlsI	TGGCCA	1 cut(s)	703
MluNI	TGGCCA	1 cut(s)	703
MlyI	GAGTC	1 cut(s)	2209
MmeI	TCCRAC	3 cut(s)	928, 2023, 2157
Mox20I	TGGCCA	1 cut(s)	703
MroXI	GAANNNNTTC	2 cut(s)	1024, 2105
MscI	TGGCCA	1 cut(s)	703
MseI	TTAA	5 cut(s)	233, 566, 1308, 1467, 1734
MslI	CAYNNNNRTG	4 cut(s)	27, 371, 427, 1586
Msp20I	TGGCCA	1 cut(s)	703
MspA1I	CMGCKG	2 cut(s)	194, 1393
MspCI	CTTAAG	1 cut(s)	1466
MspI	CCGG	1 cut(s)	1221
MspR9I	CCNGG	5 cut(s)	618, 1488, 1794, 1903, 2136
MunI	CAATTG	1 cut(s)	837
Mva1269I	GAATGC	1 cut(s)	845
MvaI	CCWGG	5 cut(s)	618, 1488, 1794, 1903, 2136
MvnI	CGCG	1 cut(s)	2034
NcoI	CCATGG	2 cut(s)	932, 1785
NdeI	CATATG	1 cut(s)	2017
NlaIV	GGNNCC	9 cut(s)	19, 415, 664, 1137, 1380, 1582, 1791, 2011, 2064
NmuCI	GTSAC	4 cut(s)	398, 916, 1966, 1972
NruI	TCGCGA	1 cut(s)	2034
NspI	RCATGY	2 cut(s)	515, 1450
OliI	CACNNNNGTG	1 cut(s)	371
PagI	TCATGA	1 cut(s)	1674
PaqCI	CACCTGC	1 cut(s)	590
PceI	AGGCCT	1 cut(s)	1620
PctI	GAATGC	1 cut(s)	845
PdmI	GAANNNNTTC	2 cut(s)	1024, 2105
PfeI	GAWTC	7 cut(s)	71, 383, 438, 1237, 1558, 1574, 1708
PflMI	CCANNNNNTGG	1 cut(s)	710
PfoI	TCCNGGA	1 cut(s)	616
PleI	GAGTC	1 cut(s)	2208
PpsI	GAGTC	1 cut(s)	2208
Ppu21I	YACGTR	1 cut(s)	1288
PshAI	GACNNNNGTC	1 cut(s)	1200
PshBI	ATTAAT	1 cut(s)	1308
PsiI	TTATAA	5 cut(s)	690, 1064, 1314, 1373, 1893
Psp1406I	AACGTT	1 cut(s)	216
Psp6I	CCWGG	5 cut(s)	616, 1486, 1792, 1901, 2134
PspEI	GGTNACC	1 cut(s)	2113
PspGI	CCWGG	5 cut(s)	616, 1486, 1792, 1901, 2134
PspN4I	GGNNCC	9 cut(s)	19, 415, 664, 1137, 1380, 1582, 1791, 2011, 2064
PspPI	GGNCC	8 cut(s)	32, 378, 413, 527, 673, 1378, 1439, 2010
PstNI	CAGNNNCTG	2 cut(s)	1949, 1970
PsuI	RGATCY	4 cut(s)	17, 1135, 1461, 1789
PvuII	CAGCTG	2 cut(s)	194, 1393
RruI	TCGCGA	1 cut(s)	2034
RsaI	GTAC	6 cut(s)	143, 497, 534, 958, 1269, 1290
RsaNI	GTAC	6 cut(s)	142, 496, 533, 957, 1268, 1289
RseI	CAYNNNNRTG	4 cut(s)	27, 371, 427, 1586
SalI	GTCGAC	1 cut(s)	800
SaqAI	TTAA	5 cut(s)	233, 566, 1308, 1467, 1734
Sau96I	GGNCC	8 cut(s)	32, 378, 413, 527, 673, 1378, 1439, 2010
ScaI	AGTACT	2 cut(s)	534, 958
SchI	GAGTC	1 cut(s)	2209
ScrFI	CCNGG	5 cut(s)	618, 1488, 1794, 1903, 2136
SduI	GDGCHC	2 cut(s)	725, 1075
SexAI	ACCWGGT	1 cut(s)	2134
SfaNI	GCATC	5 cut(s)	217, 718, 1096, 1101, 1857
SfcI	CTRYAG	1 cut(s)	1530
SinI	GGWCC	2 cut(s)	32, 413
SmiMI	CAYNNNNRTG	4 cut(s)	27, 371, 427, 1586
SmlI	CTYRAG	2 cut(s)	1010, 1466
SmoI	CTYRAG	2 cut(s)	1010, 1466
SseBI	AGGCCT	1 cut(s)	1620
SsiI	CCGC	1 cut(s)	1717
SspMI	CTAG	4 cut(s)	624, 1193, 1829, 2004
StuI	AGGCCT	1 cut(s)	1620
StyD4I	CCNGG	5 cut(s)	616, 1486, 1792, 1901, 2134
StyI	CCWWGG	4 cut(s)	238, 669, 932, 1785
TaaI	ACNGT	6 cut(s)	572, 916, 946, 1705, 1945, 1972
TaiI	ACGT	3 cut(s)	64, 219, 1290
TaqI	TCGA	4 cut(s)	537, 593, 801, 967
TatI	WGTACW	3 cut(s)	532, 956, 1267
TfiI	GAWTC	7 cut(s)	71, 383, 438, 1237, 1558, 1574, 1708
Tru1I	TTAA	5 cut(s)	233, 566, 1308, 1467, 1734
Tru9I	TTAA	5 cut(s)	233, 566, 1308, 1467, 1734
TseFI	GTSAC	4 cut(s)	398, 916, 1966, 1972
Tsp45I	GTSAC	4 cut(s)	398, 916, 1966, 1972
TspDTI	ATGAA	6 cut(s)	96, 255, 768, 1405, 1641, 1720
TspGWI	ACGGA	3 cut(s)	309, 983, 1551
Van91I	CCANNNNNTGG	1 cut(s)	710
Vha464I	CTTAAG	1 cut(s)	1466
VneI	GTGCAC	1 cut(s)	1071
VpaK11BI	GGWCC	2 cut(s)	32, 413
VspI	ATTAAT	1 cut(s)	1308
XagI	CCTNNNNNAGG	2 cut(s)	179, 472
XapI	RAATTY	8 cut(s)	83, 271, 707, 892, 1158, 1345, 2028, 2046
XceI	RCATGY	2 cut(s)	515, 1450
XmiI	GTMKAC	1 cut(s)	801
XmnI	GAANNNNTTC	2 cut(s)	1024, 2105
XspI	CTAG	4 cut(s)	624, 1193, 1829, 2004
ZrmI	AGTACT	2 cut(s)	534, 958

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.