Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000243.1

Orthogroup ID

OG0000923

Physical Location & Seq

Genomic Coordinates Forward (+)

30489 .. 34979

Gene Structure 4491 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000243.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

atgcacctccgacagcctccacctcaacaacccatgacaatgacgccactgttccttgagcctcgtcggtttccggccttttcctctgatcaccgccaccttggtgtgtggcccgaatcggagagctttagtgacaaagggtttggacccattccatcaaggtggaaaggaatctgtcagaacgataccactgggttttcctgcaacaggaagctcatcggagcaaggtacttcaataaaggacatgctgcactggcagggccagtactcgacccttatgtttactctgcacgagacttaaacggtcatggctctcacactctatcgacagcaggtgggaactttgttcctggagcaagtgtgtttggcgtggggaatgggactgccaaaggtggctcccccaaggcccgagttgctgcttataaagtgtgctggccagaatttggcagtgagtgctctgatgctgacatcttggcagcgtttgatgaagcaatacatgatggggttgatgtgatttcagtctcacttggtgtcgaccaccctcaaaattactttgaggatggcgctgcaattggggcattccatgctgtcaagcatggtatagttgttgtatgctcagcaggcaattctggtcctgatgctggaactgtcacaaatgttgcaccatggataataaccgttggagcaagtactttggatcgagagtttgaagcttttgttgaactccgtaatgggctgcgcctcaagggaagaagcctttctaaacctttgccagatgacatactttatccacttataactggtgcacaagccaaagctgtcaattcttctgctgaagatgcgatgctttgtcttagaggaaccctggatcctaagaaggtgaagggcaaaattttggtctgtcttaggggtatcagtccaagactagacaagggtcaacaagcagctctggccggagcagttgggatgattctttgtaatgatgaggccagtggtaatggactctctgatgattatcacgtactaccagcttcaaacattaattataaagatggggttgctgtctttgcctacataaattcaacagatgatccattgggatttataacggccccaacagcacagctgaatagaaaacctgctccattcatggcagctttctcctcgcaagggccaaacatgctcactcctcagatccttaagcctgatatcactgctcctggtgtaaatatcatagctgcatacacccaagcaaaaagccctacaggacaaagctatgataaacgtaggattccgtttgttactgaatctggcacctccatgtcttgccctcatgtagctggagttgtaggccttctgaagacgctctaccctgactggagttcatctgcaataaaatctgcaatcatgacaactgcaagaacgagggacaacactgtgaatccaatgcggaatggctcgttcattaaagcaacgccattcaattatgggcatggtcatataagaccaaatcgtgccatggatcctggcttgatctatgacctaaacatcaatgattacctagactttctttgtgtcattggctataacaagacaatgatgcaacttttctctgaagctccttataaatgccccaggtcagccagtcttgttgacttcaattacccttcaataacagtccctgatttgtctggctcagtcactgtgacaagaagagtgaagaatgttggttctcctagaggggccacatatgcagtccgaattcgcgaaccagttggaatttcagtatcagtggagcctaatatcttaaagttcgataaaataggtgaagagaaaagtttcaaggtaaccctgaaagctaagagacctggtgcagctaagaactatgtgtttggagggcttatttggtcggatggcaaacactatgtaaggagtccaatagtagtttcctctgctgctggtgctgtttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009888 GO:0010073 GO:0010074 GO:0016787 GO:0017171 GO:0019538 GO:0019827 GO:0032501 GO:0032502 GO:0043170 GO:0044238 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0098727 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

656

Amino Acids

70.24

Weight (kDa)

9.02

Isoelectric Point (pI)

37.27

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59810
fragaria_vesca	FvH4_3g00161 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42041 FvH4_3g42350
malus_domestica	MD03G1039300.v1.1 MD10G1341300.v1.1 MD11G1039600.v1.1 MD14G1139100.v1.1
prunus_persica	Prupe.4G001800_v2.0.a1 Prupe.6G031400_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1
pyrus_communis	pycom03g03030 pycom11g03350 pycom11g03360 pycom11g03370 pycom17g11100
rosa_chinensis	RchiOBHm_Chr5g0000221 RchiOBHm_Chr5g0075241 RchiOBHm_Chr5g0075251
rosa_laevigata	RLG00000030851 RLG00000036541 RLG00000036542
rosa_multiflora	Rmu_co8057730.1_g000001 Rmu_co8132088.1_g000001 Rmu_sc0000770.1_g000063 Rmu_sc0021936.1_g000001 Rmu_sc0031527.1_g000001 Rmu_ssc0000243.1_g000009
rosa_roxburghii	Rroxscaffold_1G00006310 Rroxscaffold_1G00075880 Rroxscaffold_3G00267190
rosa_rugosa	Rorug04G0382600 Rorug05G0437400 Rorug05G0437500 Rorug05G0437600 Rorug05G0437700 Rorug05G0437800
rosa_samantha	Rh5AG001500 Rh5AG494500 Rh5AG494600 Rh5BG002900 Rh5BG516100 Rh5BG516200 Rh5CG001800 Rh5CG539900 Rh5CG540000 Rh5DG001700 Rh5DG528800 Rh5DG528900
rosa_wichuraiana	Rw5G000200 Rw5G045880 Rw5G045890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	5 cut(s)	423, 797, 1047, 1106, 1626
AarI	CACCTGC	1 cut(s)	323
Acc36I	ACCTGC	2 cut(s)	323, 1147
AccB1I	GGYRCC	1 cut(s)	1313
AccB7I	CCANNNNNTGG	1 cut(s)	443
AccI	GTMKAC	1 cut(s)	534
AccII	CGCG	1 cut(s)	1767
AciI	CCGC	2 cut(s)	94, 1450
AclWI	GGATC	7 cut(s)	705, 863, 876, 1085, 1189, 1517, 1530
AcoI	YGGCCR	2 cut(s)	434, 951
AcsI	RAATTY	5 cut(s)	440, 891, 1078, 1761, 1779
AcuI	CTGAAG	3 cut(s)	855, 1379, 1635
AcyI	GRCGYC	1 cut(s)	44
AdeI	CACNNNGTG	1 cut(s)	530
AfaI	GTAC	4 cut(s)	230, 267, 691, 1023
AfiI	CCNNNNNNNGG	4 cut(s)	207, 443, 641, 1170
AflII	CTTAAG	1 cut(s)	1199
AgsI	TTSAA	9 cut(s)	235, 710, 722, 1035, 1083, 1483, 1660, 1671, 1843
AjnI	CCWGG	6 cut(s)	349, 864, 1219, 1525, 1634, 1867
AjuI	GAANNNNNNNTTGG	2 cut(s)	1930, 1962
AleI	CACNNNNGTG	1 cut(s)	102
AloI	GAACNNNNNNTCC	2 cut(s)	853, 885
Alw21I	GWGCWC	2 cut(s)	458, 808
Alw26I	GTCTC	3 cut(s)	288, 526, 1858
Alw44I	GTGCAC	1 cut(s)	804
AlwI	GGATC	7 cut(s)	705, 863, 876, 1085, 1189, 1517, 1530
AlwNI	CAGNNNCTG	2 cut(s)	1682, 1703
Ama87I	CYCGRG	1 cut(s)	408
ApaLI	GTGCAC	1 cut(s)	804
ApoI	RAATTY	5 cut(s)	440, 891, 1078, 1761, 1779
ArsI	GACNNNNNNTTYG	4 cut(s)	125, 157, 882, 914
AseI	ATTAAT	1 cut(s)	1041
Asp700I	GAANNNNTTC	2 cut(s)	757, 1838
AspLEI	GCGC	2 cut(s)	566, 741
AspS9I	GGNCC	8 cut(s)	111, 146, 260, 406, 632, 1111, 1172, 1743
AsuHPI	GGTGA	3 cut(s)	83, 892, 1838
AvaI	CYCGRG	1 cut(s)	408
AvaII	GGWCC	2 cut(s)	146, 632
BaeGI	GKGCMC	1 cut(s)	808
BalI	TGGCCA	1 cut(s)	436
BamHI	GGATCC	2 cut(s)	868, 1522
BanI	GGYRCC	1 cut(s)	1313
BarI	GAAGNNNNNNTAC	2 cut(s)	1352, 1384
BauI	CACGAG	1 cut(s)	291
BbsI	GAAGAC	1 cut(s)	1367
Bbv12I	GWGCWC	2 cut(s)	458, 808
BccI	CCATC	5 cut(s)	163, 494, 554, 1046, 1907
BceAI	ACGGC	1 cut(s)	1125
BciT130I	CCWGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
BclI	TGATCA	1 cut(s)	88
BcoDI	GTCTC	3 cut(s)	288, 526, 1858
BfaI	CTAG	3 cut(s)	926, 1562, 1737
BfmI	CTRYAG	1 cut(s)	1263
BfoI	RGCGCY	1 cut(s)	567
BfrI	CTTAAG	1 cut(s)	1199
BfuAI	ACCTGC	2 cut(s)	323, 1147
BlpI	GCTNAGC	1 cut(s)	616
BmcAI	AGTACT	2 cut(s)	267, 691
Bme1390I	CCNGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
Bme18I	GGWCC	2 cut(s)	146, 632
BmeT110I	CYCGRG	1 cut(s)	408
BmgT120I	GGNCC	8 cut(s)	111, 146, 260, 406, 632, 1111, 1172, 1743
BmiI	GGNNCC	9 cut(s)	148, 397, 862, 870, 1113, 1315, 1524, 1744, 1797
BmrFI	CCNGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
BmrI	ACTGGG	1 cut(s)	201
BmsI	GCATC	5 cut(s)	451, 628, 829, 834, 1590
BmuI	ACTGGG	1 cut(s)	201
BoxI	GACNNNNGTC	1 cut(s)	933
BpiI	GAAGAC	1 cut(s)	1367
BpmI	CTGGAG	3 cut(s)	372, 1362, 1399
Bpu1102I	GCTNAGC	1 cut(s)	616
BpuEI	CTTGAG	2 cut(s)	77, 728
BsaAI	YACGTR	1 cut(s)	1021
BsaBI	GATNNNNATC	1 cut(s)	1014
BsaHI	GRCGYC	1 cut(s)	44
BsaI	GGTCTC	1 cut(s)	1858
BsaJI	CCNNGG	6 cut(s)	100, 402, 665, 864, 1518, 1634
BsaXI	ACNNNNNCTCC	2 cut(s)	345, 375
Bsc4I	CCNNNNNNNGG	4 cut(s)	207, 443, 641, 1170
Bse1I	ACTGG	8 cut(s)	196, 258, 263, 805, 990, 1382, 1644, 1772
Bse8I	GATNNNNATC	1 cut(s)	1014
BseBI	CCWGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
BseDI	CCNNGG	6 cut(s)	100, 402, 665, 864, 1518, 1634
BseGI	GGATG	3 cut(s)	565, 972, 1918
BseJI	GATNNNNATC	1 cut(s)	1014
BseLI	CCNNNNNNNGG	4 cut(s)	207, 443, 641, 1170
BseMII	CTCAG	3 cut(s)	630, 1205, 1710
BseNI	ACTGG	8 cut(s)	196, 258, 263, 805, 990, 1382, 1644, 1772
BseRI	GAGGAG	2 cut(s)	1153, 1179
BseSI	GKGCMC	1 cut(s)	808
BsgI	GTGCAG	3 cut(s)	234, 273, 1893
Bsh1236I	CGCG	1 cut(s)	1767
BshNI	GGYRCC	1 cut(s)	1313
BsiHKAI	GWGCWC	2 cut(s)	458, 808
BsiHKCI	CYCGRG	1 cut(s)	408
BsiSI	CCGG	2 cut(s)	74, 954
BslFI	GGGAC	3 cut(s)	394, 1442, 1664
BslI	CCNNNNNNNGG	4 cut(s)	207, 443, 641, 1170
BsmAI	GTCTC	3 cut(s)	288, 526, 1858
BsmFI	GGGAC	3 cut(s)	394, 1442, 1664
BsmI	GAATGC	1 cut(s)	578
Bso31I	GGTCTC	1 cut(s)	1858
BsoBI	CYCGRG	1 cut(s)	408
Bsp1286I	GDGCHC	2 cut(s)	458, 808
Bsp143I	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
Bsp1720I	GCTNAGC	1 cut(s)	616
Bsp19I	CCATGG	2 cut(s)	665, 1518
Bsp68I	TCGCGA	1 cut(s)	1767
BspACI	CCGC	2 cut(s)	94, 1450
BspCNI	CTCAG	3 cut(s)	629, 1204, 1709
BspFNI	CGCG	1 cut(s)	1767
BspHI	TCATGA	1 cut(s)	1407
BspLI	GGNNCC	9 cut(s)	148, 397, 862, 870, 1113, 1315, 1524, 1744, 1797
BspMI	ACCTGC	2 cut(s)	323, 1147
BspPI	GGATC	7 cut(s)	705, 863, 876, 1085, 1189, 1517, 1530
BspT107I	GGYRCC	1 cut(s)	1313
BspTI	CTTAAG	1 cut(s)	1199
BspTNI	GGTCTC	1 cut(s)	1858
BsrI	ACTGG	8 cut(s)	196, 258, 263, 805, 990, 1382, 1644, 1772
BssECI	CCNNGG	6 cut(s)	100, 402, 665, 864, 1518, 1634
BssMI	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
BssNI	GRCGYC	1 cut(s)	44
BssSI	CACGAG	1 cut(s)	291
BssT1I	CCWWGG	4 cut(s)	100, 402, 665, 1518
Bst2BI	CACGAG	1 cut(s)	291
Bst2UI	CCWGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
Bst4CI	ACNGT	7 cut(s)	51, 305, 649, 679, 1438, 1678, 1705
Bst6I	CTCTTC	2 cut(s)	1708, 1824
BstACI	GRCGYC	1 cut(s)	44
BstAFI	CTTAAG	1 cut(s)	1199
BstAPI	GCANNNNNTGC	2 cut(s)	453, 584
BstBAI	YACGTR	1 cut(s)	1021
BstC8I	GCNNGC	2 cut(s)	434, 622
BstDEI	CTNAG	8 cut(s)	616, 854, 873, 905, 1191, 1696, 1860, 1878
BstDSI	CCRYGG	2 cut(s)	665, 1518
BstEII	GGTNACC	1 cut(s)	1846
BstENI	CCTNNNNNAGG	1 cut(s)	205
BstF5I	GGATG	3 cut(s)	565, 972, 1918
BstFNI	CGCG	1 cut(s)	1767
BstH2I	RGCGCY	1 cut(s)	567
BstHHI	GCGC	2 cut(s)	566, 741
BstKTI	GATC	7 cut(s)	91, 700, 871, 1093, 1197, 1525, 1536
BstMAI	GTCTC	3 cut(s)	288, 526, 1858
BstMBI	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
BstNI	CCWGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
BstNSI	RCATGY	2 cut(s)	248, 1183
BstPAI	GACNNNNGTC	1 cut(s)	933
BstPI	GGTNACC	1 cut(s)	1846
BstSCI	CCNGG	6 cut(s)	349, 864, 1219, 1525, 1634, 1867
BstSFI	CTRYAG	1 cut(s)	1263
BstSLI	GKGCMC	1 cut(s)	808
BstUI	CGCG	1 cut(s)	1767
BstV2I	GAAGAC	1 cut(s)	1367
BstX2I	RGATCY	3 cut(s)	868, 1194, 1522
BstXI	CCANNNNNNTGG	1 cut(s)	162
BstYI	RGATCY	3 cut(s)	868, 1194, 1522
BtgI	CCRYGG	2 cut(s)	665, 1518
BtgZI	GCGATG	1 cut(s)	857
BtsCI	GGATG	3 cut(s)	565, 972, 1918
BtsI	GCAGTG	2 cut(s)	454, 1212
BtsIMutI	CAGTG	9 cut(s)	47, 189, 251, 454, 997, 1212, 1434, 1701, 1797
BtuMI	TCGCGA	1 cut(s)	1767
BveI	ACCTGC	2 cut(s)	323, 1147
Cac8I	GCNNGC	2 cut(s)	434, 622
CaiI	CAGNNNCTG	2 cut(s)	1682, 1703
CciI	TCATGA	1 cut(s)	1407
CfoI	GCGC	2 cut(s)	566, 741
Cfr13I	GGNCC	8 cut(s)	111, 146, 260, 406, 632, 1111, 1172, 1743
CseI	GACGC	2 cut(s)	52, 1372
CsiI	ACCWGGT	1 cut(s)	1867
Csp6I	GTAC	4 cut(s)	229, 266, 690, 1022
CviQI	GTAC	4 cut(s)	229, 266, 690, 1022
DdeI	CTNAG	8 cut(s)	616, 854, 873, 905, 1191, 1696, 1860, 1878
DpnI	GATC	7 cut(s)	90, 699, 870, 1092, 1196, 1524, 1535
DpnII	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
DraIII	CACNNNGTG	1 cut(s)	530
EaeI	YGGCCR	2 cut(s)	434, 951
Eam1104I	CTCTTC	2 cut(s)	1708, 1824
EarI	CTCTTC	2 cut(s)	1708, 1824
Eco130I	CCWWGG	4 cut(s)	100, 402, 665, 1518
Eco147I	AGGCCT	1 cut(s)	1353
Eco31I	GGTCTC	1 cut(s)	1858
Eco32I	GATATC	1 cut(s)	1210
Eco47I	GGWCC	2 cut(s)	146, 632
Eco57I	CTGAAG	3 cut(s)	855, 1379, 1635
Eco88I	CYCGRG	1 cut(s)	408
Eco91I	GGTNACC	1 cut(s)	1846
EcoNI	CCTNNNNNAGG	1 cut(s)	205
EcoO65I	GGTNACC	1 cut(s)	1846
EcoRI	GAATTC	1 cut(s)	1761
EcoRII	CCWGG	6 cut(s)	349, 864, 1219, 1525, 1634, 1867
EcoRV	GATATC	1 cut(s)	1210
EcoT14I	CCWWGG	4 cut(s)	100, 402, 665, 1518
ErhI	CCWWGG	4 cut(s)	100, 402, 665, 1518
FaqI	GGGAC	3 cut(s)	394, 1442, 1664
FauNDI	CATATG	1 cut(s)	1750
FbaI	TGATCA	1 cut(s)	88
FblI	GTMKAC	1 cut(s)	534
FokI	GGATG	3 cut(s)	572, 979, 1925
FspBI	CTAG	3 cut(s)	926, 1562, 1737
GlaI	GCGC	2 cut(s)	565, 740
GsuI	CTGGAG	3 cut(s)	372, 1362, 1399
HaeII	RGCGCY	1 cut(s)	567
HapII	CCGG	2 cut(s)	74, 954
HgaI	GACGC	2 cut(s)	52, 1372
HhaI	GCGC	2 cut(s)	566, 741
Hin1I	GRCGYC	1 cut(s)	44
Hin6I	GCGC	2 cut(s)	564, 739
HinP1I	GCGC	2 cut(s)	564, 739
HincII	GTYRAC	3 cut(s)	535, 938, 1654
HindII	GTYRAC	3 cut(s)	535, 938, 1654
HindIII	AAGCTT	1 cut(s)	711
HinfI	GANTC	8 cut(s)	116, 171, 970, 1002, 1291, 1307, 1441, 1933
HpaII	CCGG	2 cut(s)	74, 954
HphI	GGTGA	3 cut(s)	83, 892, 1838
Hpy166II	GTNNAC	5 cut(s)	283, 535, 806, 938, 1654
Hpy188III	TCNNGA	4 cut(s)	635, 701, 1408, 1766
Hpy8I	GTNNAC	5 cut(s)	283, 535, 806, 938, 1654
Hpy99I	CGWCG	1 cut(s)	69
HpyAV	CCTTC	4 cut(s)	871, 877, 1364, 1677
HpyCH4III	ACNGT	7 cut(s)	51, 305, 649, 679, 1438, 1678, 1705
HpyCH4IV	ACGT	2 cut(s)	1020, 1285
HpyF3I	CTNAG	8 cut(s)	616, 854, 873, 905, 1191, 1696, 1860, 1878
HpySE526I	ACGT	2 cut(s)	1020, 1285
Hsp92I	GRCGYC	1 cut(s)	44
HspAI	GCGC	2 cut(s)	564, 739
Ksp22I	TGATCA	1 cut(s)	88
Kzo9I	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
LmnI	GCTCC	9 cut(s)	221, 353, 401, 683, 956, 1147, 1222, 1624, 1795
LweI	GCATC	5 cut(s)	451, 628, 829, 834, 1590
MabI	ACCWGGT	1 cut(s)	1867
MaeI	CTAG	3 cut(s)	926, 1562, 1737
MaeII	ACGT	2 cut(s)	1020, 1285
MaeIII	GTNAC	6 cut(s)	131, 649, 1300, 1699, 1705, 1846
MalI	GATC	7 cut(s)	90, 699, 870, 1092, 1196, 1524, 1535
MboI	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
MboII	GAAGA	7 cut(s)	762, 819, 848, 1372, 1725, 1732, 1841
MfeI	CAATTG	1 cut(s)	570
MflI	RGATCY	3 cut(s)	868, 1194, 1522
MhlI	GDGCHC	2 cut(s)	458, 808
MlsI	TGGCCA	1 cut(s)	436
MluNI	TGGCCA	1 cut(s)	436
MlyI	GAGTC	2 cut(s)	996, 1942
MmeI	TCCRAC	4 cut(s)	34, 661, 1756, 1890
Mox20I	TGGCCA	1 cut(s)	436
MroXI	GAANNNNTTC	2 cut(s)	757, 1838
MscI	TGGCCA	1 cut(s)	436
MseI	TTAA	5 cut(s)	299, 1041, 1200, 1467, 1808
MslI	CAYNNNNRTG	4 cut(s)	38, 102, 160, 1319
Msp20I	TGGCCA	1 cut(s)	436
MspA1I	CMGCKG	1 cut(s)	1126
MspCI	CTTAAG	1 cut(s)	1199
MspI	CCGG	2 cut(s)	74, 954
MspR9I	CCNGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
MunI	CAATTG	1 cut(s)	570
Mva1269I	GAATGC	1 cut(s)	578
MvaI	CCWGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
MvnI	CGCG	1 cut(s)	1767
NcoI	CCATGG	2 cut(s)	665, 1518
NdeI	CATATG	1 cut(s)	1750
NdeII	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
NlaIV	GGNNCC	9 cut(s)	148, 397, 862, 870, 1113, 1315, 1524, 1744, 1797
NmuCI	GTSAC	4 cut(s)	131, 649, 1699, 1705
NruI	TCGCGA	1 cut(s)	1767
NspI	RCATGY	2 cut(s)	248, 1183
OliI	CACNNNNGTG	1 cut(s)	102
PagI	TCATGA	1 cut(s)	1407
PaqCI	CACCTGC	1 cut(s)	323
PceI	AGGCCT	1 cut(s)	1353
PctI	GAATGC	1 cut(s)	578
PdmI	GAANNNNTTC	2 cut(s)	757, 1838
PfeI	GAWTC	6 cut(s)	116, 171, 970, 1291, 1307, 1441
PflMI	CCANNNNNTGG	1 cut(s)	443
PfoI	TCCNGGA	1 cut(s)	349
PleI	GAGTC	2 cut(s)	996, 1941
PpsI	GAGTC	2 cut(s)	996, 1941
Ppu21I	YACGTR	1 cut(s)	1021
PshAI	GACNNNNGTC	1 cut(s)	933
PshBI	ATTAAT	1 cut(s)	1041
PsiI	TTATAA	5 cut(s)	423, 797, 1047, 1106, 1626
Psp6I	CCWGG	6 cut(s)	349, 864, 1219, 1525, 1634, 1867
PspEI	GGTNACC	1 cut(s)	1846
PspGI	CCWGG	6 cut(s)	349, 864, 1219, 1525, 1634, 1867
PspN4I	GGNNCC	9 cut(s)	148, 397, 862, 870, 1113, 1315, 1524, 1744, 1797
PspPI	GGNCC	8 cut(s)	111, 146, 260, 406, 632, 1111, 1172, 1743
PstNI	CAGNNNCTG	2 cut(s)	1682, 1703
PsuI	RGATCY	3 cut(s)	868, 1194, 1522
PvuII	CAGCTG	1 cut(s)	1126
RruI	TCGCGA	1 cut(s)	1767
RsaI	GTAC	4 cut(s)	230, 267, 691, 1023
RsaNI	GTAC	4 cut(s)	229, 266, 690, 1022
RseI	CAYNNNNRTG	4 cut(s)	38, 102, 160, 1319
SalI	GTCGAC	1 cut(s)	533
SaqAI	TTAA	5 cut(s)	299, 1041, 1200, 1467, 1808
Sau3AI	GATC	7 cut(s)	88, 697, 868, 1090, 1194, 1522, 1533
Sau96I	GGNCC	8 cut(s)	111, 146, 260, 406, 632, 1111, 1172, 1743
ScaI	AGTACT	2 cut(s)	267, 691
SchI	GAGTC	2 cut(s)	996, 1942
ScrFI	CCNGG	6 cut(s)	351, 866, 1221, 1527, 1636, 1869
SduI	GDGCHC	2 cut(s)	458, 808
SexAI	ACCWGGT	1 cut(s)	1867
SfaNI	GCATC	5 cut(s)	451, 628, 829, 834, 1590
SfcI	CTRYAG	1 cut(s)	1263
SinI	GGWCC	2 cut(s)	146, 632
SmiMI	CAYNNNNRTG	4 cut(s)	38, 102, 160, 1319
SmlI	CTYRAG	3 cut(s)	56, 743, 1199
SmoI	CTYRAG	3 cut(s)	56, 743, 1199
SseBI	AGGCCT	1 cut(s)	1353
SsiI	CCGC	2 cut(s)	94, 1450
SspMI	CTAG	3 cut(s)	926, 1562, 1737
StuI	AGGCCT	1 cut(s)	1353
StyD4I	CCNGG	6 cut(s)	349, 864, 1219, 1525, 1634, 1867
StyI	CCWWGG	4 cut(s)	100, 402, 665, 1518
TaaI	ACNGT	7 cut(s)	51, 305, 649, 679, 1438, 1678, 1705
TaiI	ACGT	2 cut(s)	1023, 1288
TaqI	TCGA	5 cut(s)	270, 326, 534, 700, 1815
TatI	WGTACW	2 cut(s)	265, 689
TfiI	GAWTC	6 cut(s)	116, 171, 970, 1291, 1307, 1441
Tru1I	TTAA	5 cut(s)	299, 1041, 1200, 1467, 1808
Tru9I	TTAA	5 cut(s)	299, 1041, 1200, 1467, 1808
TscAI	CASTG	9 cut(s)	54, 196, 258, 454, 997, 1219, 1441, 1708, 1797
TseFI	GTSAC	4 cut(s)	131, 649, 1699, 1705
Tsp45I	GTSAC	4 cut(s)	131, 649, 1699, 1705
TspDTI	ATGAA	4 cut(s)	501, 1138, 1374, 1453
TspGWI	ACGGA	2 cut(s)	716, 1284
TspRI	CASTG	9 cut(s)	54, 196, 258, 454, 997, 1219, 1441, 1708, 1797
Van91I	CCANNNNNTGG	1 cut(s)	443
Vha464I	CTTAAG	1 cut(s)	1199
VneI	GTGCAC	1 cut(s)	804
VpaK11BI	GGWCC	2 cut(s)	146, 632
VspI	ATTAAT	1 cut(s)	1041
XagI	CCTNNNNNAGG	1 cut(s)	205
XapI	RAATTY	5 cut(s)	440, 891, 1078, 1761, 1779
XceI	RCATGY	2 cut(s)	248, 1183
XmiI	GTMKAC	1 cut(s)	534
XmnI	GAANNNNTTC	2 cut(s)	757, 1838
XspI	CTAG	3 cut(s)	926, 1562, 1737
ZrmI	AGTACT	2 cut(s)	267, 691

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.