Rorug05G0437800

subtilisin-like protease

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
60842539 .. 60843844
1306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0437800.1

Sequence Viewer

Length: 228 bp
ATGGCAACCGCTCCTCTAACACCCCAAAAGAAGAAAACCACTGCCCTTTCACCAACAAAGAGGGGCAAAATCAAGGCTCGGATTCTCGGAAACTTGGTCAAAGCTGTGCTCTCCATGGTCAAACCCGGAGATCAGGGAAAAAAGATAGCCACTGAAGTTGGTGGAGGCTCTCCCTCTCCAACACCACCACTCAGTGGCTACAACTCCTATGGCAGCCCCAATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

75

Amino Acids

7.69

Weight (kDa)

10.47

Isoelectric Point (pI)

44.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 194
AccBSI CCGCTC 1 cut(s) 11
AciI CCGC 1 cut(s) 9
AcuI CTGAAG 1 cut(s) 174
AdeI CACNNNGTG 1 cut(s) 194
AfiI CCNNNNNNNGG 1 cut(s) 194
AluBI AGCT 1 cut(s) 104
AluI AGCT 1 cut(s) 104
Alw21I GWGCWC 1 cut(s) 111
ApeKI GCWGC 1 cut(s) 213
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 1 cut(s) 42
Bbv12I GWGCWC 1 cut(s) 111
BcnI CCSGG 1 cut(s) 126
BisI GCNGC 1 cut(s) 214
BlsI GCNGC 1 cut(s) 215
Bme1390I CCNGG 1 cut(s) 126
BmrFI CCNGG 1 cut(s) 126
BpuMI CCSGG 1 cut(s) 126
BsaJI CCNNGG 1 cut(s) 114
Bsc4I CCNNNNNNNGG 1 cut(s) 194
BseDI CCNNGG 1 cut(s) 114
BseLI CCNNNNNNNGG 1 cut(s) 194
BseMII CTCAG 1 cut(s) 205
BsiHKAI GWGCWC 1 cut(s) 111
BsiSI CCGG 1 cut(s) 126
BslI CCNNNNNNNGG 1 cut(s) 194
Bsp1286I GDGCHC 1 cut(s) 111
Bsp143I GATC 1 cut(s) 130
Bsp19I CCATGG 1 cut(s) 114
BspACI CCGC 1 cut(s) 9
BspCNI CTCAG 1 cut(s) 204
BsrBI CCGCTC 1 cut(s) 11
BssECI CCNNGG 1 cut(s) 114
BssMI GATC 1 cut(s) 130
BssT1I CCWWGG 1 cut(s) 114
BstDEI CTNAG 1 cut(s) 191
BstDSI CCRYGG 1 cut(s) 114
BstKTI GATC 1 cut(s) 133
BstMBI GATC 1 cut(s) 130
BstSCI CCNGG 1 cut(s) 124
BtgI CCRYGG 1 cut(s) 114
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 3 cut(s) 39, 150, 199
CspCI CAANNNNNGTGG 2 cut(s) 139, 174
CviAII CATG 1 cut(s) 115
CviJI RGCY 6 cut(s) 77, 104, 149, 168, 198, 216
CviKI_1 RGCY 6 cut(s) 77, 104, 149, 168, 198, 216
DdeI CTNAG 1 cut(s) 191
DpnI GATC 1 cut(s) 132
DpnII GATC 1 cut(s) 130
DraIII CACNNNGTG 1 cut(s) 194
Eco130I CCWWGG 1 cut(s) 114
Eco57I CTGAAG 1 cut(s) 174
EcoT14I CCWWGG 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 114
FaeI CATG 1 cut(s) 118
FaiI YATR 2 cut(s) 116, 210
FatI CATG 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 214
Fsp4HI GCNGC 1 cut(s) 214
GluI GCNGC 1 cut(s) 214
HapII CCGG 1 cut(s) 126
Hin1II CATG 1 cut(s) 118
HinfI GANTC 1 cut(s) 82
HpaII CCGG 1 cut(s) 126
HphI GGTGA 1 cut(s) 42
Hpy188I TCNGA 2 cut(s) 81, 89
HpyF3I CTNAG 1 cut(s) 191
Hsp92II CATG 1 cut(s) 118
Kzo9I GATC 1 cut(s) 130
LmnI GCTCC 1 cut(s) 16
LpnPI CCDG 2 cut(s) 119, 139
MalI GATC 1 cut(s) 132
MbiI CCGCTC 1 cut(s) 11
MboI GATC 1 cut(s) 130
MboII GAAGA 1 cut(s) 43
MhlI GDGCHC 1 cut(s) 111
MmeI TCCRAC 1 cut(s) 203
MnlI CCTC 4 cut(s) 24, 54, 158, 184
MspI CCGG 1 cut(s) 126
MspR9I CCNGG 1 cut(s) 126
NciI CCSGG 1 cut(s) 126
NcoI CCATGG 1 cut(s) 114
NdeII GATC 1 cut(s) 130
NlaIII CATG 1 cut(s) 118
PfeI GAWTC 1 cut(s) 82
PflMI CCANNNNNTGG 1 cut(s) 194
PkrI GCNGC 1 cut(s) 215
SatI GCNGC 1 cut(s) 214
Sau3AI GATC 1 cut(s) 130
ScrFI CCNGG 1 cut(s) 126
SduI GDGCHC 1 cut(s) 111
SetI ASST 1 cut(s) 106
SgeI CNNG 8 cut(s) 85, 90, 98, 106, 127, 137, 138, 146
SsiI CCGC 1 cut(s) 9
StyD4I CCNGG 1 cut(s) 124
StyI CCWWGG 1 cut(s) 114
TfiI GAWTC 1 cut(s) 82
TscAI CASTG 3 cut(s) 46, 157, 199
TseI GCWGC 1 cut(s) 213
TspRI CASTG 3 cut(s) 46, 157, 199
Van91I CCANNNNNTGG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.