Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000923

Physical Location & Seq

Genomic Coordinates Reverse (-)

119457 .. 123581

Gene Structure 4125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG001700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2010 bp

ATGTGGTTTCTAAAGCTTTCATGTTTTCTCCAATTACTCGTCGTTTTTTCTCTGTTTCAAGTACCCGCTTTTGCAATAAAAAAGTCTTATGTAGTGTATCTGGGATCCCATGCACATGGTTCACAAGTCTTAGAAGCTGATCGTGAACGTGCAACTGATTCGCATTATGAATTCCTCGGATCATTCTTGGGAAGCACTGACAAAGCGAAAGAAGCGATTATTTACTCGTACAATAGATATATCAATGGTTTTGCTGCCACCCTTGAAGAGGAAGAGGCAGCTGAAATTGCAAAGCATCCAAACGTTGTCTCAGTTTTCTTAAACCAAGGAATAAAATTGCATACAACCCATTCATGGAATTTTATGCTACTGGAAAAGAACGGAGTAATTCACCCCAGTTCTATATGGAAGAAGGCCAGATTTGGTGAAGATACGATCATAGCCAATCTTGACACTGGTGTGTGGCCCGAATCGGAGAGCTTTAGTGACAAAGGGTTTGGACCCATTCCATCAAGGTGGAAAGGAATCTGTCAGAACGATACCACTGGGTTTTCCTGCAACAGGAAGCTCATCGGAGCAAGGTACTTCAATAAAGGACATGCTGCACTGGCAGGGCCAGTAGTACTCGACCCTTCTGTTTACTCTGCACGAGACTTAAACGGAAATTCTGGTGCTGATGCTGGAACTGTCACAAATGTTGCACCATGGATAATAACCGTTGGAGCAAGTACTTTGGATCGAGAGTTTGAAGCTTTTGTTGAACTCCGTAATGGGCTGCGCCTCAAGGGAAGAAGCCTTTCTAAACCTTTGCCAGATGACATACTTTATCCACTTATAACTGGTGCACAAGCCAAAGCTGTCAATTCTTCTGCTGAAGATGCGATGCTTTGTCTTAGAGGAACCCTGGATCCTAAGAAGGTGAAGGGCAAAATTTTGGTCTGTCTTAGGGGTATCAGTCCAAGACTAGACAAGGGTCAACAAGCAGCTCTGGCCGGAGCAGTTGGGATGATTCTTTGTAATGATGAGGCCAGTGGTAATGTACTCTCTGATGATTATCACGTACTACCAGCTTCAAACATTAATTATAAAGATGGGGTTGCTGTCTTTGCCTACATAAATTCAACAGATGATCCATTGGGATTTATAACGGCCCCAACAGCACAACTGAATAGAAAACCTGCTCCATTCATGGCAGCTTTCTCCTCGCAAGGGCCAAACATGCTCACTCCTCAGATCCTTAAGCCTGATATCACTGCTCCTGGTGTAAATATCATAGCTGCATACACCCAAGCAAAAAGCCCTACAGGACAAAGCTATGATAAACGCAGGATTCCGTTTGTTACTGAATCTGGCACCTCCATGTCTTGCCCTCATGTAGCTGGAGTTGTAGGCCTTCTGAAGACGCTCTACCCTGACTGGAGTTCATCTGCAATAAAATCTGCAATCATGACAACTGCAAGAACGAGGGACAACACTGTGAATCCAATGCGGAATGGCTCGTTCATTAAAGCAACGCCATTCAATTATGGGCATGGTCATATAAGACCAAATCGTGCCATGGATCCTGGCTTGATCTATGACCTCAACATCAATGATTACCTAGACTTTCTTTGTGTCATTGGCTATAACAAGACAATGATGCAACTTTTCTCTGAAGCTCCTTACAAATGCCCCAAGTCAGCCAGTCTTGTTGACTTCAATTACCCTTCAATAACAGTCCCTGATTTGTCTGGCTCAGTCACTGTGACAAGAAGAGTGAAGAATGTTGGATCTCCTAGAGGGGCCACATATGCAGTCCGAATTCGCGAACCAGTTGGAATTTCAGTATCAGTGGAGCCTAATATCTTGAAGTTCAATAAAATAGGTGAAGAGAAAAGTTTCAAGGTAACCCTGAAAGCTAAGAGACCTGGTGCAGCTAAGAACTATGTGTTTGGAGGGCTTATTTGGTCGGATGGCAAACACTATGTAAGGAGTCCAATAGTAGTTTCCTCTGCTGCTGGTGCTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009888 GO:0010073 GO:0010074 GO:0016787 GO:0017171 GO:0019538 GO:0019827 GO:0032501 GO:0032502 GO:0043170 GO:0044238 GO:0048507 GO:0048856 GO:0070011 GO:0071704 GO:0098727 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

669

Amino Acids

72.74

Weight (kDa)

9.17

Isoelectric Point (pI)

32.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	29 - 114	1.4e-17	Peptidase inhibitor I9
PA	PF02225	294 - 367	4.6e-12	PA domain
Peptidase_S8	PF00082	343 - 497	1e-20	Subtilase family
fn3_6	PF17766	565 - 662	2.7e-31	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000923)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G59810
fragaria_vesca	FvH4_3g00161 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42040 FvH4_3g42041 FvH4_3g42350
malus_domestica	MD03G1039300.v1.1 MD10G1341300.v1.1 MD11G1039600.v1.1 MD14G1139100.v1.1
prunus_persica	Prupe.4G001800_v2.0.a1 Prupe.6G031400_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1 Prupe.6G031500_v2.0.a1
pyrus_communis	pycom03g03030 pycom11g03350 pycom11g03360 pycom11g03370 pycom17g11100
rosa_chinensis	RchiOBHm_Chr5g0000221 RchiOBHm_Chr5g0075241 RchiOBHm_Chr5g0075251
rosa_laevigata	RLG00000030851 RLG00000036541 RLG00000036542
rosa_multiflora	Rmu_co8057730.1_g000001 Rmu_co8132088.1_g000001 Rmu_sc0000770.1_g000063 Rmu_sc0021936.1_g000001 Rmu_sc0031527.1_g000001 Rmu_ssc0000243.1_g000009
rosa_roxburghii	Rroxscaffold_1G00006310 Rroxscaffold_1G00075880 Rroxscaffold_3G00267190
rosa_rugosa	Rorug04G0382600 Rorug05G0437400 Rorug05G0437500 Rorug05G0437600 Rorug05G0437700 Rorug05G0437800
rosa_samantha	Rh5AG001500 Rh5AG494500 Rh5AG494600 Rh5BG002900 Rh5BG516100 Rh5BG516200 Rh5CG001800 Rh5CG539900 Rh5CG540000 Rh5DG001700 Rh5DG528800 Rh5DG528900
rosa_wichuraiana	Rw5G000200 Rw5G045880 Rw5G045890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	836, 1086, 1145
Acc36I	ACCTGC	1 cut(s)	1186
AccB1I	GGYRCC	1 cut(s)	1352
AccII	CGCG	1 cut(s)	1806
AciI	CCGC	2 cut(s)	66, 1489
AclI	AACGTT	1 cut(s)	303
AcoI	YGGCCR	1 cut(s)	990
AcsI	RAATTY	7 cut(s)	170, 358, 664, 930, 1117, 1800, 1818
AcuI	CTGAAG	3 cut(s)	894, 1418, 1674
AfaI	GTAC	7 cut(s)	63, 230, 584, 624, 730, 1041, 1062
AfiI	CCNNNNNNNGG	4 cut(s)	268, 354, 561, 1209
AflII	CTTAAG	1 cut(s)	1238
AjnI	CCWGG	4 cut(s)	903, 1258, 1564, 1906
AjuI	GAANNNNNNNTTGG	2 cut(s)	1969, 2001
AleI	CACNNNNGTG	1 cut(s)	458
AloI	GAACNNNNNNTCC	2 cut(s)	892, 924
Alw21I	GWGCWC	1 cut(s)	847
Alw26I	GTCTC	3 cut(s)	313, 645, 1897
Alw44I	GTGCAC	1 cut(s)	843
AlwNI	CAGNNNCTG	2 cut(s)	1721, 1742
AoxI	GGCC	9 cut(s)	414, 464, 614, 990, 1026, 1149, 1211, 1390, 1782
ApaLI	GTGCAC	1 cut(s)	843
ApeKI	GCWGC	9 cut(s)	254, 278, 602, 775, 983, 1193, 1277, 1913, 1994
ApoI	RAATTY	7 cut(s)	170, 358, 664, 930, 1117, 1800, 1818
ArsI	GACNNNNNNTTYG	4 cut(s)	479, 511, 921, 953
AseI	ATTAAT	1 cut(s)	1080
Asp700I	GAANNNNTTC	2 cut(s)	796, 1877
AspLEI	GCGC	1 cut(s)	780
AspS9I	GGNCC	6 cut(s)	465, 500, 614, 1150, 1211, 1782
AsuHPI	GGTGA	4 cut(s)	383, 437, 931, 1877
AvaII	GGWCC	1 cut(s)	500
BaeGI	GKGCMC	1 cut(s)	847
BamHI	GGATCC	3 cut(s)	104, 907, 1561
BanI	GGYRCC	1 cut(s)	1352
BarI	GAAGNNNNNNTAC	2 cut(s)	1391, 1423
BauI	CACGAG	1 cut(s)	648
BbsI	GAAGAC	1 cut(s)	1406
Bbv12I	GWGCWC	1 cut(s)	847
BbvI	GCAGC	9 cut(s)	241, 290, 589, 762, 995, 1205, 1264, 1925, 1981
BccI	CCATC	3 cut(s)	517, 1085, 1946
BceAI	ACGGC	1 cut(s)	1164
BcgI	CGANNNNNNTGC	2 cut(s)	141, 175
BciT130I	CCWGG	4 cut(s)	905, 1260, 1566, 1908
BcoDI	GTCTC	3 cut(s)	313, 645, 1897
BfaI	CTAG	3 cut(s)	965, 1601, 1776
BfmI	CTRYAG	1 cut(s)	1302
BfrI	CTTAAG	1 cut(s)	1238
BfuAI	ACCTGC	1 cut(s)	1186
BisI	GCNGC	9 cut(s)	255, 279, 603, 776, 984, 1194, 1278, 1914, 1995
BlsI	GCNGC	9 cut(s)	256, 280, 604, 777, 985, 1195, 1279, 1915, 1996
BmcAI	AGTACT	2 cut(s)	624, 730
Bme1390I	CCNGG	4 cut(s)	905, 1260, 1566, 1908
Bme18I	GGWCC	1 cut(s)	500
BmgT120I	GGNCC	6 cut(s)	465, 500, 614, 1150, 1211, 1782
BmiI	GGNNCC	9 cut(s)	106, 502, 901, 909, 1152, 1354, 1563, 1783, 1836
BmrFI	CCNGG	4 cut(s)	905, 1260, 1566, 1908
BmrI	ACTGGG	2 cut(s)	390, 555
BmsI	GCATC	5 cut(s)	304, 667, 868, 873, 1629
BmuI	ACTGGG	2 cut(s)	390, 555
BoxI	GACNNNNGTC	1 cut(s)	972
BpiI	GAAGAC	1 cut(s)	1406
BpmI	CTGGAG	2 cut(s)	1401, 1438
BpuEI	CTTGAG	1 cut(s)	767
BsaAI	YACGTR	1 cut(s)	1060
BsaBI	GATNNNNATC	1 cut(s)	1053
BsaI	GGTCTC	1 cut(s)	1897
BsaJI	CCNNGG	5 cut(s)	175, 325, 704, 903, 1557
Bsc4I	CCNNNNNNNGG	4 cut(s)	268, 354, 561, 1209
Bse8I	GATNNNNATC	1 cut(s)	1053
BseBI	CCWGG	4 cut(s)	905, 1260, 1566, 1908
BseDI	CCNNGG	5 cut(s)	175, 325, 704, 903, 1557
BseGI	GGATG	3 cut(s)	295, 1011, 1957
BseJI	GATNNNNATC	1 cut(s)	1053
BseLI	CCNNNNNNNGG	4 cut(s)	268, 354, 561, 1209
BseMII	CTCAG	3 cut(s)	324, 1244, 1749
BseRI	GAGGAG	2 cut(s)	1192, 1218
BseSI	GKGCMC	1 cut(s)	847
BseXI	GCAGC	9 cut(s)	241, 290, 589, 762, 995, 1205, 1264, 1925, 1981
BsgI	GTGCAG	3 cut(s)	588, 630, 1932
Bsh1236I	CGCG	1 cut(s)	1806
BshFI	GGCC	9 cut(s)	416, 466, 616, 992, 1028, 1151, 1213, 1392, 1784
BshNI	GGYRCC	1 cut(s)	1352
BsiHKAI	GWGCWC	1 cut(s)	847
BsiSI	CCGG	1 cut(s)	993
BslFI	GGGAC	2 cut(s)	1481, 1703
BslI	CCNNNNNNNGG	4 cut(s)	268, 354, 561, 1209
BsmAI	GTCTC	3 cut(s)	313, 645, 1897
BsmFI	GGGAC	2 cut(s)	1481, 1703
BsnI	GGCC	9 cut(s)	416, 466, 616, 992, 1028, 1151, 1213, 1392, 1784
Bso31I	GGTCTC	1 cut(s)	1897
Bsp1286I	GDGCHC	1 cut(s)	847
Bsp19I	CCATGG	2 cut(s)	704, 1557
Bsp68I	TCGCGA	1 cut(s)	1806
BspACI	CCGC	2 cut(s)	66, 1489
BspANI	GGCC	9 cut(s)	416, 466, 616, 992, 1028, 1151, 1213, 1392, 1784
BspCNI	CTCAG	3 cut(s)	323, 1243, 1748
BspFNI	CGCG	1 cut(s)	1806
BspHI	TCATGA	1 cut(s)	1446
BspLI	GGNNCC	9 cut(s)	106, 502, 901, 909, 1152, 1354, 1563, 1783, 1836
BspMI	ACCTGC	1 cut(s)	1186
BspT107I	GGYRCC	1 cut(s)	1352
BspTI	CTTAAG	1 cut(s)	1238
BspTNI	GGTCTC	1 cut(s)	1897
BssECI	CCNNGG	5 cut(s)	175, 325, 704, 903, 1557
BssSI	CACGAG	1 cut(s)	648
BssT1I	CCWWGG	3 cut(s)	325, 704, 1557
Bst2BI	CACGAG	1 cut(s)	648
Bst2UI	CCWGG	4 cut(s)	905, 1260, 1566, 1908
Bst4CI	ACNGT	5 cut(s)	688, 718, 1477, 1717, 1744
Bst6I	CTCTTC	4 cut(s)	261, 267, 1747, 1863
BstAFI	CTTAAG	1 cut(s)	1238
BstBAI	YACGTR	1 cut(s)	1060
BstDEI	CTNAG	9 cut(s)	130, 310, 893, 912, 944, 1230, 1735, 1899, 1917
BstDSI	CCRYGG	2 cut(s)	704, 1557
BstEII	GGTNACC	1 cut(s)	1885
BstENI	CCTNNNNNAGG	2 cut(s)	266, 559
BstF5I	GGATG	3 cut(s)	295, 1011, 1957
BstFNI	CGCG	1 cut(s)	1806
BstHHI	GCGC	1 cut(s)	780
BstMAI	GTCTC	3 cut(s)	313, 645, 1897
BstNI	CCWGG	4 cut(s)	905, 1260, 1566, 1908
BstNSI	RCATGY	2 cut(s)	602, 1222
BstPAI	GACNNNNGTC	1 cut(s)	972
BstPI	GGTNACC	1 cut(s)	1885
BstSCI	CCNGG	4 cut(s)	903, 1258, 1564, 1906
BstSFI	CTRYAG	1 cut(s)	1302
BstSLI	GKGCMC	1 cut(s)	847
BstUI	CGCG	1 cut(s)	1806
BstV1I	GCAGC	9 cut(s)	241, 290, 589, 762, 995, 1205, 1264, 1925, 1981
BstV2I	GAAGAC	1 cut(s)	1406
BstX2I	RGATCY	5 cut(s)	104, 907, 1233, 1561, 1769
BstXI	CCANNNNNNTGG	2 cut(s)	116, 516
BstYI	RGATCY	5 cut(s)	104, 907, 1233, 1561, 1769
BsuRI	GGCC	9 cut(s)	416, 466, 616, 992, 1028, 1151, 1213, 1392, 1784
BtgI	CCRYGG	2 cut(s)	704, 1557
BtgZI	GCGATG	1 cut(s)	896
BtsCI	GGATG	3 cut(s)	295, 1011, 1957
BtsI	GCAGTG	1 cut(s)	1251
BtsIMutI	CAGTG	9 cut(s)	195, 453, 543, 605, 1036, 1251, 1473, 1740, 1836
BtuMI	TCGCGA	1 cut(s)	1806
BveI	ACCTGC	1 cut(s)	1186
CaiI	CAGNNNCTG	2 cut(s)	1721, 1742
CciI	TCATGA	1 cut(s)	1446
CfoI	GCGC	1 cut(s)	780
Cfr13I	GGNCC	6 cut(s)	465, 500, 614, 1150, 1211, 1782
CseI	GACGC	1 cut(s)	1411
CsiI	ACCWGGT	1 cut(s)	1906
Csp6I	GTAC	7 cut(s)	62, 229, 583, 623, 729, 1040, 1061
CviQI	GTAC	7 cut(s)	62, 229, 583, 623, 729, 1040, 1061
DdeI	CTNAG	9 cut(s)	130, 310, 893, 912, 944, 1230, 1735, 1899, 1917
EaeI	YGGCCR	1 cut(s)	990
Eam1104I	CTCTTC	4 cut(s)	261, 267, 1747, 1863
EarI	CTCTTC	4 cut(s)	261, 267, 1747, 1863
Eco130I	CCWWGG	3 cut(s)	325, 704, 1557
Eco147I	AGGCCT	1 cut(s)	1392
Eco31I	GGTCTC	1 cut(s)	1897
Eco32I	GATATC	1 cut(s)	1249
Eco47I	GGWCC	1 cut(s)	500
Eco57I	CTGAAG	3 cut(s)	894, 1418, 1674
Eco91I	GGTNACC	1 cut(s)	1885
EcoNI	CCTNNNNNAGG	2 cut(s)	266, 559
EcoO65I	GGTNACC	1 cut(s)	1885
EcoRI	GAATTC	2 cut(s)	170, 1800
EcoRII	CCWGG	4 cut(s)	903, 1258, 1564, 1906
EcoRV	GATATC	1 cut(s)	1249
EcoT14I	CCWWGG	3 cut(s)	325, 704, 1557
ErhI	CCWWGG	3 cut(s)	325, 704, 1557
FaqI	GGGAC	2 cut(s)	1481, 1703
FauI	CCCGC	1 cut(s)	73
FauNDI	CATATG	1 cut(s)	1789
Fnu4HI	GCNGC	9 cut(s)	255, 279, 603, 776, 984, 1194, 1278, 1914, 1995
FokI	GGATG	3 cut(s)	282, 1018, 1964
Fsp4HI	GCNGC	9 cut(s)	255, 279, 603, 776, 984, 1194, 1278, 1914, 1995
FspBI	CTAG	3 cut(s)	965, 1601, 1776
GlaI	GCGC	1 cut(s)	779
GluI	GCNGC	9 cut(s)	255, 279, 603, 776, 984, 1194, 1278, 1914, 1995
GsuI	CTGGAG	2 cut(s)	1401, 1438
HaeIII	GGCC	9 cut(s)	416, 466, 616, 992, 1028, 1151, 1213, 1392, 1784
HapII	CCGG	1 cut(s)	993
HgaI	GACGC	1 cut(s)	1411
HhaI	GCGC	1 cut(s)	780
Hin6I	GCGC	1 cut(s)	778
HinP1I	GCGC	1 cut(s)	778
HincII	GTYRAC	2 cut(s)	977, 1693
HindII	GTYRAC	2 cut(s)	977, 1693
HindIII	AAGCTT	2 cut(s)	14, 750
HinfI	GANTC	8 cut(s)	158, 470, 525, 1009, 1330, 1346, 1480, 1972
HpaII	CCGG	1 cut(s)	993
HphI	GGTGA	4 cut(s)	383, 437, 931, 1877
Hpy166II	GTNNAC	6 cut(s)	122, 146, 640, 845, 977, 1693
Hpy188III	TCNNGA	6 cut(s)	143, 449, 740, 1447, 1805, 1846
Hpy8I	GTNNAC	6 cut(s)	122, 146, 640, 845, 977, 1693
Hpy99I	CGWCG	1 cut(s)	44
HpyAV	CCTTC	6 cut(s)	406, 642, 910, 916, 1403, 1716
HpyCH4III	ACNGT	5 cut(s)	688, 718, 1477, 1717, 1744
HpyCH4IV	ACGT	3 cut(s)	148, 303, 1059
HpyF3I	CTNAG	9 cut(s)	130, 310, 893, 912, 944, 1230, 1735, 1899, 1917
HpySE526I	ACGT	3 cut(s)	148, 303, 1059
HspAI	GCGC	1 cut(s)	778
LmnI	GCTCC	7 cut(s)	575, 722, 995, 1186, 1261, 1663, 1834
Lsp1109I	GCAGC	9 cut(s)	241, 290, 589, 762, 995, 1205, 1264, 1925, 1981
LweI	GCATC	5 cut(s)	304, 667, 868, 873, 1629
MabI	ACCWGGT	1 cut(s)	1906
MaeI	CTAG	3 cut(s)	965, 1601, 1776
MaeII	ACGT	3 cut(s)	148, 303, 1059
MaeIII	GTNAC	6 cut(s)	485, 688, 1339, 1738, 1744, 1885
MflI	RGATCY	5 cut(s)	104, 907, 1233, 1561, 1769
MhlI	GDGCHC	1 cut(s)	847
MlyI	GAGTC	1 cut(s)	1981
MmeI	TCCRAC	4 cut(s)	700, 1747, 1795, 1929
MroXI	GAANNNNTTC	2 cut(s)	796, 1877
MseI	TTAA	5 cut(s)	320, 656, 1080, 1239, 1506
MslI	CAYNNNNRTG	4 cut(s)	114, 458, 514, 1358
MspA1I	CMGCKG	1 cut(s)	281
MspCI	CTTAAG	1 cut(s)	1238
MspI	CCGG	1 cut(s)	993
MspR9I	CCNGG	4 cut(s)	905, 1260, 1566, 1908
MvaI	CCWGG	4 cut(s)	905, 1260, 1566, 1908
MvnI	CGCG	1 cut(s)	1806
NcoI	CCATGG	2 cut(s)	704, 1557
NdeI	CATATG	1 cut(s)	1789
NlaIV	GGNNCC	9 cut(s)	106, 502, 901, 909, 1152, 1354, 1563, 1783, 1836
NmuCI	GTSAC	4 cut(s)	485, 688, 1738, 1744
NruI	TCGCGA	1 cut(s)	1806
NspI	RCATGY	2 cut(s)	602, 1222
OliI	CACNNNNGTG	1 cut(s)	458
PagI	TCATGA	1 cut(s)	1446
PceI	AGGCCT	1 cut(s)	1392
PdmI	GAANNNNTTC	2 cut(s)	796, 1877
PfeI	GAWTC	7 cut(s)	158, 470, 525, 1009, 1330, 1346, 1480
PkrI	GCNGC	9 cut(s)	256, 280, 604, 777, 985, 1195, 1279, 1915, 1996
PleI	GAGTC	1 cut(s)	1980
PpsI	GAGTC	1 cut(s)	1980
Ppu21I	YACGTR	1 cut(s)	1060
PshAI	GACNNNNGTC	1 cut(s)	972
PshBI	ATTAAT	1 cut(s)	1080
PsiI	TTATAA	3 cut(s)	836, 1086, 1145
Psp1406I	AACGTT	1 cut(s)	303
Psp6I	CCWGG	4 cut(s)	903, 1258, 1564, 1906
PspEI	GGTNACC	1 cut(s)	1885
PspGI	CCWGG	4 cut(s)	903, 1258, 1564, 1906
PspN4I	GGNNCC	9 cut(s)	106, 502, 901, 909, 1152, 1354, 1563, 1783, 1836
PspPI	GGNCC	6 cut(s)	465, 500, 614, 1150, 1211, 1782
PstNI	CAGNNNCTG	2 cut(s)	1721, 1742
PsuI	RGATCY	5 cut(s)	104, 907, 1233, 1561, 1769
PvuII	CAGCTG	1 cut(s)	281
RruI	TCGCGA	1 cut(s)	1806
RsaI	GTAC	7 cut(s)	63, 230, 584, 624, 730, 1041, 1062
RsaNI	GTAC	7 cut(s)	62, 229, 583, 623, 729, 1040, 1061
RseI	CAYNNNNRTG	4 cut(s)	114, 458, 514, 1358
SaqAI	TTAA	5 cut(s)	320, 656, 1080, 1239, 1506
SatI	GCNGC	9 cut(s)	255, 279, 603, 776, 984, 1194, 1278, 1914, 1995
Sau96I	GGNCC	6 cut(s)	465, 500, 614, 1150, 1211, 1782
ScaI	AGTACT	2 cut(s)	624, 730
SchI	GAGTC	1 cut(s)	1981
ScrFI	CCNGG	4 cut(s)	905, 1260, 1566, 1908
SduI	GDGCHC	1 cut(s)	847
SexAI	ACCWGGT	1 cut(s)	1906
SfaNI	GCATC	5 cut(s)	304, 667, 868, 873, 1629
SfcI	CTRYAG	1 cut(s)	1302
SinI	GGWCC	1 cut(s)	500
SmiMI	CAYNNNNRTG	4 cut(s)	114, 458, 514, 1358
SmlI	CTYRAG	2 cut(s)	782, 1238
SmoI	CTYRAG	2 cut(s)	782, 1238
SseBI	AGGCCT	1 cut(s)	1392
SsiI	CCGC	2 cut(s)	66, 1489
SspMI	CTAG	3 cut(s)	965, 1601, 1776
StuI	AGGCCT	1 cut(s)	1392
StyD4I	CCNGG	4 cut(s)	903, 1258, 1564, 1906
StyI	CCWWGG	3 cut(s)	325, 704, 1557
TaaI	ACNGT	5 cut(s)	688, 718, 1477, 1717, 1744
TaiI	ACGT	3 cut(s)	151, 306, 1062
TaqI	TCGA	2 cut(s)	627, 739
TatI	WGTACW	3 cut(s)	622, 728, 1039
TfiI	GAWTC	7 cut(s)	158, 470, 525, 1009, 1330, 1346, 1480
Tru1I	TTAA	5 cut(s)	320, 656, 1080, 1239, 1506
Tru9I	TTAA	5 cut(s)	320, 656, 1080, 1239, 1506
TscAI	CASTG	9 cut(s)	202, 460, 550, 612, 1036, 1258, 1480, 1747, 1836
TseFI	GTSAC	4 cut(s)	485, 688, 1738, 1744
TseI	GCWGC	9 cut(s)	254, 278, 602, 775, 983, 1193, 1277, 1913, 1994
Tsp45I	GTSAC	4 cut(s)	485, 688, 1738, 1744
TspDTI	ATGAA	6 cut(s)	9, 183, 342, 1177, 1413, 1492
TspGWI	ACGGA	4 cut(s)	396, 675, 755, 1323
TspRI	CASTG	9 cut(s)	202, 460, 550, 612, 1036, 1258, 1480, 1747, 1836
Vha464I	CTTAAG	1 cut(s)	1238
VneI	GTGCAC	1 cut(s)	843
VpaK11BI	GGWCC	1 cut(s)	500
VspI	ATTAAT	1 cut(s)	1080
XagI	CCTNNNNNAGG	2 cut(s)	266, 559
XapI	RAATTY	7 cut(s)	170, 358, 664, 930, 1117, 1800, 1818
XceI	RCATGY	2 cut(s)	602, 1222
XmnI	GAANNNNTTC	2 cut(s)	796, 1877
XspI	CTAG	3 cut(s)	965, 1601, 1776
ZrmI	AGTACT	2 cut(s)	624, 730

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.