Rorug05G0437700

subtilisin-like protease

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Reverse (-)
60829548 .. 60829763
216 bp
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UTR
Exon/CDS
Intron
Rorug05G0437700.1

Sequence Viewer

Length: 216 bp
ATGGCAACCGCTTCTCTAAAACCTCAAAAGAAGAAAACCACTGGCCTTCCACCAACAAAGAGGGGCAAAATCAAGGCTCGGATTCTCGGAAACATGTTCAAAGCTGTGGTCTCCATGTTCAAGCTCAAAAAGATAGCCGCTGAAGGTGGTGGAGGCTCTGCCTCTCCAACACCACCACTCAGTGGCTACAACTCCTATGGCAGCCCCAATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

71

Amino Acids

7.36

Weight (kDa)

10.72

Isoelectric Point (pI)

27.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 182
AciI CCGC 2 cut(s) 9, 138
AcuI CTGAAG 1 cut(s) 162
AdeI CACNNNGTG 1 cut(s) 182
AfiI CCNNNNNNNGG 1 cut(s) 182
AflIII ACRYGT 1 cut(s) 93
AgsI TTSAA 2 cut(s) 100, 121
AluBI AGCT 2 cut(s) 104, 124
AluI AGCT 2 cut(s) 104, 124
Alw26I GTCTC 1 cut(s) 115
AoxI GGCC 1 cut(s) 43
ApeKI GCWGC 1 cut(s) 201
ArsI GACNNNNNNTTYG 2 cut(s) 93, 125
BcoDI GTCTC 1 cut(s) 115
BisI GCNGC 2 cut(s) 138, 202
BlsI GCNGC 2 cut(s) 139, 203
BsaI GGTCTC 1 cut(s) 115
Bsc4I CCNNNNNNNGG 1 cut(s) 182
Bse1I ACTGG 1 cut(s) 46
BseLI CCNNNNNNNGG 1 cut(s) 182
BseMII CTCAG 1 cut(s) 193
BseNI ACTGG 1 cut(s) 46
BshFI GGCC 1 cut(s) 45
BslI CCNNNNNNNGG 1 cut(s) 182
BsmAI GTCTC 1 cut(s) 115
BsnI GGCC 1 cut(s) 45
Bso31I GGTCTC 1 cut(s) 115
BspACI CCGC 2 cut(s) 9, 138
BspANI GGCC 1 cut(s) 45
BspCNI CTCAG 1 cut(s) 192
BspTNI GGTCTC 1 cut(s) 115
BsrI ACTGG 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 179
BstMAI GTCTC 1 cut(s) 115
BstNSI RCATGY 1 cut(s) 97
BsuRI GGCC 1 cut(s) 45
BtsIMutI CAGTG 2 cut(s) 39, 187
CviAII CATG 2 cut(s) 94, 115
CviJI RGCY 8 cut(s) 45, 77, 104, 124, 137, 156, 186, 204
CviKI_1 RGCY 8 cut(s) 45, 77, 104, 124, 137, 156, 186, 204
DdeI CTNAG 1 cut(s) 179
DraIII CACNNNGTG 1 cut(s) 182
Eco31I GGTCTC 1 cut(s) 115
Eco57I CTGAAG 1 cut(s) 162
FaeI CATG 2 cut(s) 97, 118
FaiI YATR 3 cut(s) 95, 116, 198
FatI CATG 2 cut(s) 93, 114
Fnu4HI GCNGC 2 cut(s) 138, 202
Fsp4HI GCNGC 2 cut(s) 138, 202
GluI GCNGC 2 cut(s) 138, 202
HaeIII GGCC 1 cut(s) 45
Hin1II CATG 2 cut(s) 97, 118
HinfI GANTC 1 cut(s) 82
Hpy188I TCNGA 2 cut(s) 81, 89
HpyAV CCTTC 2 cut(s) 56, 137
HpyF3I CTNAG 1 cut(s) 179
Hsp92II CATG 2 cut(s) 97, 118
LpnPI CCDG 1 cut(s) 27
MboII GAAGA 1 cut(s) 43
MmeI TCCRAC 1 cut(s) 191
MnlI CCTC 4 cut(s) 33, 54, 146, 172
MspA1I CMGCKG 1 cut(s) 140
NlaIII CATG 2 cut(s) 97, 118
NspI RCATGY 1 cut(s) 97
PciI ACATGT 1 cut(s) 93
PfeI GAWTC 1 cut(s) 82
PflMI CCANNNNNTGG 1 cut(s) 182
PkrI GCNGC 2 cut(s) 139, 203
PscI ACATGT 1 cut(s) 93
SatI GCNGC 2 cut(s) 138, 202
SetI ASST 4 cut(s) 25, 106, 126, 148
SgeI CNNG 7 cut(s) 54, 85, 90, 98, 106, 127, 133
SsiI CCGC 2 cut(s) 9, 138
TauI GCSGC 1 cut(s) 140
TfiI GAWTC 1 cut(s) 82
TscAI CASTG 2 cut(s) 46, 187
TseI GCWGC 1 cut(s) 201
TspRI CASTG 2 cut(s) 46, 187
Van91I CCANNNNNTGG 1 cut(s) 182
XceI RCATGY 1 cut(s) 97
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.