FvH4_7g08440

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
8309648 .. 8319232
9585 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08440.t1

Sequence Viewer

Length: 4545 bp
ATGGTCTGGGAGGACATGTTCGATTTACGCAGAGCAATGAATTCCAGGCTTCAATTTCGGACTGAATGGCTCCAGCAAAAGTTTCCCTGCTTGTGTGAGCACATAAGCATAGTTATGCAACTTAGTTTCCTTGGCATCCTACTACTGTATTATCTACAAAAAATTATGGGCCAGATCTGCAAACAAAGAACAAAGTCCCCAGATCAAGGAATAGAGAAGCATGGCACCGGCATTGGCATAAGATTCAGCACCATTTACAAGATCAGCATAACTTGTTGCCTTTTACTGATGGTAACTCATTTCATATTGCTGCTGTTGTTGCTAAACGGAAGTGTCACTTACTGCAATCATAAAGTTCGTGCAATTTCATCTGAGGGAATGCAAGTGGTATCATGGGCAGTATCATCGATCACAGTATACCAGATTCTGAATGTCAAGTCCTTTAAGTTTCCTTGGCTATTAAGAGCATGGTGGTTTTGCAGCTTCATATTGTCCATCATCTCTGTGGCTGCTGATACTCATTTCCGTATCACATATCATGGTCAGCTTCAGTTACAAGATTATGCTGACTTTGCAAGTGTCCTTGCAACCACCTGCTTATTTGCTATTTCAATGCAAGGGAAGACAGGCCTCACCGTTACCATCCCAAATGGCATCACTGAACCACTTATAAATGGAAAAGGTGATAAACAATCAGAAGGAAGACAACAATCTCCATATGGAAAAGCTACTCTCCTCCAACTTGTCACATTCTCTTGGCTGAACCCTTTATTTGCCATTGGAGCCAGGAAACCCCTAGACCAGGAAGAAATCCCAGATGTTGATATCAAAGACTCGGCTGAATATCTGTCTCACTCTTTTGATGAGAAACTGCGAAATGTGAAAGAGAGAGATGGAACCACAAACCCAGAAATCTACAAGACTATATACTTATTTATCAGGAAGAAAGCAGCAATCAATGCATTGTTTGCAGTAATATCTGCTGTTGCATCATATGTTGGTCCATATCTCATTGATGACTTTGTAAACTTTCTGACACAGAAGAAAACTAGAAGCTTAGGGAGTGGCTACGTTCTAGCACTTGCCTTTCTTGGAGCTAAGATGGTTGAAACAATAGCACAGAGGCAATGGATTTTTGGCGCTCGACAGCTAGGGCTTCGCCTTAGAGCTGCTCTGATATCTCATATTTTCCAGAAAGGCTTGCGTCTATCAAGCCTATCCCGCCAAAGCCACACTAGTGGAGAGGTCATCAATTATATGAGTGTAGACATCCAAAGAATCACAGACTTCATCTGGTACTTAAATATAATATGGATGATGCCTATTCAAATTTCCTTGGCTATCTACATTCTTCATACAAATCTAGGCATGGGTTCATTAGCTGCATTAGCAGCAACTTTGGCAGTACTGCTTTGCAACATACCGATGACTAATCTCCAAAAGAGATATCAGACTAGGATCATGGAAGCCAAGGACAACAGGATGAAAGCCACTTCAGAAGTTCTTCGAAGCATGAAGACAATCAAGCTTCAGGCATGGGACGGTCAGTTCCTTCACAAGTTAGAAAGTTTGAGAAAAGTAGAGTATGATTGGCTATGGAAGTCTCTACGATTGACAGCAATTGGCGCTTTTGTCTTCTGGGGATCACCCACATTTATCTCTGTGGTCACATTCTGGGCTTGTATGCTGATGGGCATAGACCTCACAGCAGGGAGAGTTTTATCAGCATTGGCCACCTTCAGAATGTTACAAGACCCTATATTCAATCTACCTGACCTTCTCTCCGCGATTGCACAGGGTAAAGTATCTGCTGATAGAGTAGCTTCATATCTCATGGAAGATGAAATTCAGCAGGATGCCATTGAGCATGTTCCAAAAGATCAGATGGAAAACTCCATTGAGATAGAAAATGGAAAATTTGGCTGGAATATTGATTCCAACAGCATCACTCTTGATGGAATCCACTTAAAAGTGAAGAGGGGTATGAAAGTGGCAATCTGTGGGACTGTAGGATCAGGGAAGTCTAGTCTGCTGTCATGCATTCTTGGAGAGATTCAAAAGTTGTCGGGGACAGTCAAGATCAGTGGTACAAAGGCTTATGTTCCTCAATCTCCATGGATTCTGACAGGAAATATCAGGGAGAATATTCTGTTTGGCAATGCATACGACAAGGCCAAGTATGACAGAACAGTTAAGGCATGTGCATTGGAAAAGGATTTTGAGCTATTCTCCTGTGGAGATCTAACAGAAATTGGAGAAAGAGGAATTAATATGAGCGGAGGACAGAAACAAAGAATACAAATTGCTCGTGCAGTTTACCAAGATGCTGATATATATTTACTGGACGACCCTTATAGTGCTGTTGATGCTCACACAGGCACCCAACTCTTTGAGGACTGCATGATGGGAATTCTCAGAGAGAAGACTACTCTTTATGTCACTCACCAGGTTGAGTTTCTCCCAGCAGCAGACCTAATTCTGGTGATGCAAGATGGAAAGATTGTTCAAGCTGGAAACTTCGAAGAGCTTCTAAAACAAAATATTGGCTTTGAAGTTATGGTCGGTGCTCATAGCCGAGCTCTAGAGTCAATCCTCACAGTTGAAAATAGCAGCAGAACTACTCAAGATCCAATAGCTGACAGTGAACTCAATACAGAGTGCACTTCAAATGCTGAACTTCAACAGACACAACAGGAATCCGAGCATAATCTTTCTCTAGAGATTACAGAAAAAGAAGGAAAATTGGTTCAAGAGGAAGAGAGAGAGAAAGGAAGCATTGGGAAGGAAGTTTACTGGTCGTATTTGACAACTGTGAAAGGTGGTGTGCTTATTCCAATCATACTCTTGGCTCAGTCATCGTTCCAAGTACTGCAGGTAGCTAGTAACTATTGGATGGCATGGGCTTCTCCTCCTACAATTGAAACGGAACCTAAAATGGGAATAAAGTTCACATTACTTGTTTATATCCTACTTGCTGTTGGAAGTTCACTTTGTGTGCTGTTGCGTTCATCGCTAGTAGCAGTAGCAGGAATTTCAACAGCTCAAAAACTCTTCATGGCTATGCTACATAGTATACTCCGAGCGCCAATGTCATTTTTTGATTCAACACCAACAGGAAGAATCTTAAATCGGGCATCCACTGATCAAAGTGTGTTAGATTTGGAAATGGCAAACAAATTAGGTTGGTGTGCTTTCTCAATAATACAGATTCTAGGCACCATAGCAGTGATGTCACAAGTTGCCTGGGAAGTGTTTGTGATATTCATTCCTGTAACTGCAGTTTGCATATGGTATCAGCAATATTACATACCAACAGCAAGAGAACTGGCACGGTTATCAGGCATACAAAGAGCTCCAATCCTCCACCACTTTGCGGAATCTCTGGCAGGAGCAGCAACAATCCGTGCTTTTGATCAAGAAGACCGCTTCAGTGATGCAAACCTCCATCTTATAGACAACCACTCAAGACCATGGTTTCATAATGTGTCAGCAATGGAGTGGCTTTCTTTCAGACTAAATATACTGTCCAACTTCGTGTTTGCCTTCTCACTGGTTCTATTGGTGACCCTCCCTGAAGGAGTTATCAATCCAAGCATTGCAGGGTTGGCAGTAACATATGGAATAAACTTGAATGTTCTGCAAGCTTCGGTTATATGGAACATATGCAATGCAGAAAATAAGATGATCTCAGTCGAAAGAATTTTGCAGTACTCAAATCTAACAAGTGAAGCACCTCTTGTGATTGAAGATAGCAAGCCACCAATCAACTGGCCGCAAGTTGGAACAATTTGTTTCAAAAATCTACAGATCCGTTATGCTGAACATCTCCCATCTGTCCTGAAAAACATTAGCTGCACATTTCCTGGACAGAACAAAGTTGGGGTTGTAGGAAGGACGGGCAGTGGGAAATCAACCCTCATACAGGCCCTTTTCAGGATAGTTGAACCTAGAGAAGGAAACATTATAATTGATGACGTAGATATTTGCAAAATTGGCCTTCATGATTTAAGATCAAGGCTTAGTATCATTCCGCAGGACCCAACAATGTTTGAAGGAACGGTGAGAGGAAACCTCGACCCATTAGAGCAATACTCGGACAGCAATGTTTGGGAGGCTCTAGATAAATGTCAGCTAGGTGGTCTAGTGCGAGCGAAGGAAGAGAAGCTGGAAGCATCAGTGGTAGAAAATGGAGAAAATTGGAGTGCGGGTCAAAGACAGTTAATTTGCCTTGGAAGAGCATTGCTCAAGAAAAGCAGAATTCTGGTATTGGATGAAGCAACCGCATCTGTTGATTCTGCAACTGATGGGGTGATCCAGAAGATCATCAGCCAAGAATTCAAAGATCGAACTGTCATCACAATAGCTCACAGAATCCACACAGTTATAGACAGTGATCTCGTTTTGGTCCTTAGCGATGGAAGGATTGCAGAATACGACACACCAGCCAAGCTACTAGAGAGAGAAGAGTCCTTATTTTCAAAACTCATAAAGGAGTACTCAATGAGATCCCAGAGCTTCAACAACCTAGCAAATCTACATAGCTAA

Protein Analysis

1515

Amino Acids

169.5

Weight (kDa)

6.66

Isoelectric Point (pI)

40.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 319 - 586 1.9e-30 ABC transporter transmembrane region
ABC_tran PF00005 651 - 785 8.6e-20 ABC transporter
ABC_membrane PF00664 975 - 1190 4.7e-36 ABC transporter transmembrane region
ABC_tran PF00005 1280 - 1428 4.9e-25 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 671, 3965
AarI CACCTGC 1 cut(s) 602
Acc36I ACCTGC 2 cut(s) 602, 2863
AccB1I GGYRCC 3 cut(s) 224, 2378, 3215
AccBSI CCGCTC 1 cut(s) 2277
AccI GTMKAC 3 cut(s) 417, 1266, 3073
AccII CGCG 1 cut(s) 1787
AciI CCGC 9 cut(s) 1222, 1785, 2277, 3374, 3424, 3773, 4031, 4205, 4281
AclWI GGATC 7 cut(s) 1466, 1651, 2020, 2621, 3802, 4306, 4500
AcoI YGGCCR 2 cut(s) 1731, 3770
AcsI RAATTY 9 cut(s) 40, 1329, 1845, 1916, 2409, 3030, 3699, 4257, 4334
AcuI CTGAAG 6 cut(s) 533, 1479, 1514, 1723, 3412, 3594
AdeI CACNNNGTG 1 cut(s) 2993
AfaI GTAC 6 cut(s) 1298, 1407, 2089, 2868, 3710, 4496
AfiI CCNNNNNNNGG 9 cut(s) 206, 802, 2479, 2936, 3373, 3779, 3922, 3933, 3953
AflIII ACRYGT 1 cut(s) 15
AhlI ACTAGT 1 cut(s) 1235
AjnI CCWGG 6 cut(s) 44, 785, 801, 2445, 3242, 3862
AleI CACNNNNGTG 1 cut(s) 1236
AloI GAACNNNNNNTCC 7 cut(s) 34, 1532, 1564, 2487, 2519, 2730, 2762
Alw21I GWGCWC 5 cut(s) 102, 2569, 2581, 2663, 3355
Alw26I GTCTC 2 cut(s) 855, 1608
Alw44I GTGCAC 1 cut(s) 2659
AlwI GGATC 7 cut(s) 1466, 1651, 2020, 2621, 3802, 4306, 4500
AlwNI CAGNNNCTG 1 cut(s) 427
AoxI GGCC 7 cut(s) 169, 628, 1731, 2172, 3770, 3924, 3994
ApaLI GTGCAC 1 cut(s) 2659
ApoI RAATTY 9 cut(s) 40, 1329, 1845, 1916, 2409, 3030, 3699, 4257, 4334
ArsI GACNNNNNNTTYG 2 cut(s) 4206, 4238
AseI ATTAAT 1 cut(s) 2268
Asp700I GAANNNNTTC 2 cut(s) 1503, 2526
AspLEI GCGC 3 cut(s) 1142, 1628, 3085
AspS9I GGNCC 5 cut(s) 169, 1001, 3925, 4036, 4405
AsuHPI GGTGA 8 cut(s) 625, 695, 1638, 2435, 2494, 3574, 4072, 4321
AsuII TTCGAA 2 cut(s) 1507, 2520
AvaII GGWCC 3 cut(s) 1001, 4036, 4405
BaeGI GKGCMC 1 cut(s) 2663
BalI TGGCCA 1 cut(s) 1733
BanI GGYRCC 3 cut(s) 224, 2378, 3215
BanII GRGCYC 2 cut(s) 2581, 3355
BarI GAAGNNNNNNTAC 2 cut(s) 2774, 2806
BauI CACGAG 1 cut(s) 2307
BbsI GAAGAC 6 cut(s) 629, 709, 1523, 1627, 2429, 3426
Bbv12I GWGCWC 5 cut(s) 102, 2569, 2581, 2663, 3355
BcgI CGANNNNNNTGC 2 cut(s) 387, 421
BciT130I CCWGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
BclI TGATCA 2 cut(s) 3142, 3412
BcoDI GTCTC 2 cut(s) 855, 1608
BcuI ACTAGT 1 cut(s) 1235
BfmI CTRYAG 4 cut(s) 2007, 2870, 3276, 3803
BfoI RGCGCY 3 cut(s) 1143, 1629, 3086
BfuAI ACCTGC 2 cut(s) 602, 2863
BglII AGATCT 2 cut(s) 174, 2239
BmcAI AGTACT 4 cut(s) 1407, 2868, 3710, 4496
Bme1390I CCNGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
Bme18I GGWCC 3 cut(s) 1001, 4036, 4405
BmgT120I GGNCC 5 cut(s) 169, 1001, 3925, 4036, 4405
BmiI GGNNCC 8 cut(s) 71, 226, 784, 898, 2380, 2928, 3217, 4038
BmrFI CCNGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
BpiI GAAGAC 6 cut(s) 629, 709, 1523, 1627, 2429, 3426
BplI GAGNNNNNCTC 8 cut(s) 2213, 2245, 4056, 4088, 4076, 4108, 4227, 4259
BpmI CTGGAG 1 cut(s) 56
Bpu10I CCTNAGC 2 cut(s) 1057, 4409
Bpu14I TTCGAA 2 cut(s) 1507, 2520
BpuEI CTTGAG 3 cut(s) 2607, 3448, 4229
Bsa29I ATCGAT 1 cut(s) 407
BsaJI CCNNGG 8 cut(s) 130, 452, 1335, 1470, 2114, 3243, 3470, 4228
BsaXI ACNNNNNCTCC 5 cut(s) 32, 1766, 1796, 4192, 4222
Bsc4I CCNNNNNNNGG 9 cut(s) 206, 802, 2479, 2936, 3373, 3779, 3922, 3933, 3953
Bse118I RCCGGY 1 cut(s) 227
Bse1I ACTGG 5 cut(s) 2346, 2798, 3330, 3555, 3773
Bse3DI GCAATG 8 cut(s) 42, 1133, 2164, 3498, 3594, 3673, 4108, 4238
BseBI CCWGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
BseCI ATCGAT 1 cut(s) 407
BseDI CCNNGG 8 cut(s) 130, 452, 1335, 1470, 2114, 3243, 3470, 4228
BseGI GGATG 9 cut(s) 135, 642, 1269, 1320, 1488, 1861, 2898, 3134, 4276
BseLI CCNNNNNNNGG 9 cut(s) 206, 802, 2479, 2936, 3373, 3779, 3922, 3933, 3953
BseMI GCAATG 8 cut(s) 42, 1133, 2164, 3498, 3594, 3673, 4108, 4238
BseMII CTCAG 4 cut(s) 363, 2428, 2864, 3702
BseNI ACTGG 5 cut(s) 2346, 2798, 3330, 3555, 3773
BseRI GAGGAG 2 cut(s) 725, 2898
BseSI GKGCMC 1 cut(s) 2663
BseYI CCCAGC 1 cut(s) 2461
BsgI GTGCAG 2 cut(s) 2331, 3838
Bsh1236I CGCG 1 cut(s) 1787
BshFI GGCC 7 cut(s) 171, 630, 1733, 2174, 3772, 3926, 3996
BshNI GGYRCC 3 cut(s) 224, 2378, 3215
BshVI ATCGAT 1 cut(s) 407
BsiHKAI GWGCWC 5 cut(s) 102, 2569, 2581, 2663, 3355
BsiSI CCGG 1 cut(s) 228
BslFI GGGAC 4 cut(s) 181, 1553, 2017, 2083
BslI CCNNNNNNNGG 9 cut(s) 206, 802, 2479, 2936, 3373, 3779, 3922, 3933, 3953
BsmAI GTCTC 2 cut(s) 855, 1608
BsmFI GGGAC 4 cut(s) 181, 1553, 2017, 2083
BsmI GAATGC 2 cut(s) 384, 2040
BsnI GGCC 7 cut(s) 171, 630, 1733, 2174, 3772, 3926, 3996
Bsp119I TTCGAA 2 cut(s) 1507, 2520
Bsp1286I GDGCHC 5 cut(s) 102, 2569, 2581, 2663, 3355
Bsp19I CCATGG 2 cut(s) 2114, 3470
BspACI CCGC 9 cut(s) 1222, 1785, 2277, 3374, 3424, 3773, 4031, 4205, 4281
BspANI GGCC 7 cut(s) 171, 630, 1733, 2174, 3772, 3926, 3996
BspCNI CTCAG 4 cut(s) 364, 2427, 2863, 3701
BspDI ATCGAT 1 cut(s) 407
BspFNI CGCG 1 cut(s) 1787
BspHI TCATGA 1 cut(s) 4000
BspLI GGNNCC 8 cut(s) 71, 226, 784, 898, 2380, 2928, 3217, 4038
BspMAI CTGCAG 2 cut(s) 2874, 3280
BspMI ACCTGC 2 cut(s) 602, 2863
BspPI GGATC 7 cut(s) 1466, 1651, 2020, 2621, 3802, 4306, 4500
BspQI GCTCTTC 2 cut(s) 2517, 4228
BspT104I TTCGAA 2 cut(s) 1507, 2520
BspT107I GGYRCC 3 cut(s) 224, 2378, 3215
BsrBI CCGCTC 1 cut(s) 2277
BsrDI GCAATG 8 cut(s) 42, 1133, 2164, 3498, 3594, 3673, 4108, 4238
BsrFI RCCGGY 1 cut(s) 227
BsrI ACTGG 5 cut(s) 2346, 2798, 3330, 3555, 3773
BssAI RCCGGY 1 cut(s) 227
BssECI CCNNGG 8 cut(s) 130, 452, 1335, 1470, 2114, 3243, 3470, 4228
BssNAI GTATAC 2 cut(s) 418, 3074
BssSI CACGAG 1 cut(s) 2307
BssT1I CCWWGG 7 cut(s) 130, 452, 1335, 1470, 2114, 3470, 4228
Bst1107I GTATAC 2 cut(s) 418, 3074
Bst2BI CACGAG 1 cut(s) 2307
Bst2UI CCWGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
Bst6I CTCTTC 7 cut(s) 1970, 2517, 2751, 3056, 4152, 4228, 4458
BstAPI GCANNNNNTGC 2 cut(s) 959, 968
BstBI TTCGAA 2 cut(s) 1507, 2520
BstC8I GCNNGC 4 cut(s) 1202, 3642, 3755, 4149
BstDSI CCRYGG 2 cut(s) 2114, 3470
BstEII GGTNACC 1 cut(s) 3562
BstENI CCTNNNNNAGG 3 cut(s) 800, 3920, 3951
BstF5I GGATG 9 cut(s) 135, 642, 1269, 1320, 1488, 1861, 2898, 3134, 4276
BstFNI CGCG 1 cut(s) 1787
BstH2I RGCGCY 3 cut(s) 1143, 1629, 3086
BstHHI GCGC 3 cut(s) 1142, 1628, 3085
BstMAI GTCTC 2 cut(s) 855, 1608
BstNI CCWGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
BstNSI RCATGY 3 cut(s) 19, 1871, 2202
BstPI GGTNACC 1 cut(s) 3562
BstSCI CCNGG 6 cut(s) 44, 785, 801, 2445, 3242, 3862
BstSFI CTRYAG 4 cut(s) 2007, 2870, 3276, 3803
BstSLI GKGCMC 1 cut(s) 2663
BstUI CGCG 1 cut(s) 1787
BstV2I GAAGAC 6 cut(s) 629, 709, 1523, 1627, 2429, 3426
BstX2I RGATCY 5 cut(s) 174, 2239, 2626, 3807, 4505
BstXI CCANNNNNNTGG 2 cut(s) 1238, 3768
BstYI RGATCY 5 cut(s) 174, 2239, 2626, 3807, 4505
BstZ17I GTATAC 2 cut(s) 418, 3074
Bsu15I ATCGAT 1 cut(s) 407
BsuRI GGCC 7 cut(s) 171, 630, 1733, 2174, 3772, 3926, 3996
BsuTUI ATCGAT 1 cut(s) 407
BtgI CCRYGG 2 cut(s) 2114, 3470
BtgZI GCGATG 2 cut(s) 2994, 4428
BtsCI GGATG 9 cut(s) 135, 642, 1269, 1320, 1488, 1861, 2898, 3134, 4276
BtsI GCAGTG 2 cut(s) 3231, 3907
BveI ACCTGC 2 cut(s) 602, 2863
Cac8I GCNNGC 4 cut(s) 1202, 3642, 3755, 4149
CaiI CAGNNNCTG 1 cut(s) 427
CciI TCATGA 1 cut(s) 4000
CfoI GCGC 3 cut(s) 1142, 1628, 3085
Cfr10I RCCGGY 1 cut(s) 227
Cfr13I GGNCC 5 cut(s) 169, 1001, 3925, 4036, 4405
ClaI ATCGAT 1 cut(s) 407
CseI GACGC 1 cut(s) 1193
CsiI ACCWGGT 1 cut(s) 2445
Csp6I GTAC 6 cut(s) 1297, 1406, 2088, 2867, 3709, 4495
CspCI CAANNNNNGTGG 2 cut(s) 2065, 2100
CviQI GTAC 6 cut(s) 1297, 1406, 2088, 2867, 3709, 4495
DraIII CACNNNGTG 1 cut(s) 2993
EaeI YGGCCR 2 cut(s) 1731, 3770
Eam1104I CTCTTC 7 cut(s) 1970, 2517, 2751, 3056, 4152, 4228, 4458
EarI CTCTTC 7 cut(s) 1970, 2517, 2751, 3056, 4152, 4228, 4458
Ecl136II GAGCTC 2 cut(s) 2579, 3353
Eco130I CCWWGG 7 cut(s) 130, 452, 1335, 1470, 2114, 3470, 4228
Eco147I AGGCCT 1 cut(s) 630
Eco24I GRGCYC 2 cut(s) 2581, 3355
Eco32I GATATC 3 cut(s) 826, 1179, 1448
Eco47I GGWCC 3 cut(s) 1001, 4036, 4405
Eco53kI GAGCTC 2 cut(s) 2579, 3353
Eco57I CTGAAG 6 cut(s) 533, 1479, 1514, 1723, 3412, 3594
Eco91I GGTNACC 1 cut(s) 3562
EcoICRI GAGCTC 2 cut(s) 2579, 3353
EcoNI CCTNNNNNAGG 3 cut(s) 800, 3920, 3951
EcoO109I RGGNCCY 2 cut(s) 3925, 4036
EcoO65I GGTNACC 1 cut(s) 3562
EcoRI GAATTC 4 cut(s) 40, 2409, 4257, 4334
EcoRII CCWGG 6 cut(s) 44, 785, 801, 2445, 3242, 3862
EcoRV GATATC 3 cut(s) 826, 1179, 1448
EcoT14I CCWWGG 7 cut(s) 130, 452, 1335, 1470, 2114, 3470, 4228
EcoT22I ATGCAT 3 cut(s) 964, 2042, 2164
EcoT38I GRGCYC 2 cut(s) 2581, 3355
ErhI CCWWGG 7 cut(s) 130, 452, 1335, 1470, 2114, 3470, 4228
FalI AAGNNNNNCTT 4 cut(s) 322, 354, 3720, 3752
FaqI GGGAC 4 cut(s) 181, 1553, 2017, 2083
FauI CCCGC 2 cut(s) 1229, 4198
FauNDI CATATG 5 cut(s) 718, 994, 3287, 3616, 3662
FbaI TGATCA 2 cut(s) 3142, 3412
FblI GTMKAC 3 cut(s) 417, 1266, 3073
FokI GGATG 9 cut(s) 122, 629, 1256, 1327, 1495, 1868, 2905, 3121, 4283
FriOI GRGCYC 2 cut(s) 2581, 3355
GlaI GCGC 3 cut(s) 1141, 1627, 3084
GsaI CCCAGC 1 cut(s) 2465
GsuI CTGGAG 1 cut(s) 56
HaeII RGCGCY 3 cut(s) 1143, 1629, 3086
HaeIII GGCC 7 cut(s) 171, 630, 1733, 2174, 3772, 3926, 3996
HapII CCGG 1 cut(s) 228
HgaI GACGC 1 cut(s) 1193
HhaI GCGC 3 cut(s) 1142, 1628, 3085
Hin6I GCGC 3 cut(s) 1140, 1626, 3083
HinP1I GCGC 3 cut(s) 1140, 1626, 3083
HindIII AAGCTT 3 cut(s) 1054, 1526, 3642
HpaII CCGG 1 cut(s) 228
HphI GGTGA 8 cut(s) 625, 695, 1638, 2435, 2494, 3574, 4072, 4321
HpyCH4IV ACGT 2 cut(s) 1071, 3975
HpySE526I ACGT 2 cut(s) 1071, 3975
HspAI GCGC 3 cut(s) 1140, 1626, 3083
Ksp22I TGATCA 2 cut(s) 3142, 3412
LguI GCTCTTC 2 cut(s) 2517, 4228
LmnI GCTCC 5 cut(s) 75, 782, 1094, 3358, 3389
MabI ACCWGGT 1 cut(s) 2445
MaeII ACGT 2 cut(s) 1071, 3975
MbiI CCGCTC 1 cut(s) 2277
MfeI CAATTG 2 cut(s) 1620, 2916
MflI RGATCY 5 cut(s) 174, 2239, 2626, 3807, 4505
MhlI GDGCHC 5 cut(s) 102, 2569, 2581, 2663, 3355
MlsI TGGCCA 1 cut(s) 1733
MluNI TGGCCA 1 cut(s) 1733
MlyI GAGTC 3 cut(s) 827, 2594, 4475
MmeI TCCRAC 5 cut(s) 763, 1962, 2959, 3552, 3760
Mox20I TGGCCA 1 cut(s) 1733
Mph1103I ATGCAT 3 cut(s) 964, 2042, 2164
MroXI GAANNNNTTC 2 cut(s) 1503, 2526
MscI TGGCCA 1 cut(s) 1733
MseI TTAA 9 cut(s) 444, 461, 1301, 1967, 2193, 2268, 3125, 4007, 4220
MslI CAYNNNNRTG 6 cut(s) 113, 503, 1236, 1424, 3059, 3224
Msp20I TGGCCA 1 cut(s) 1733
MspI CCGG 1 cut(s) 228
MspR9I CCNGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
MunI CAATTG 2 cut(s) 1620, 2916
Mva1269I GAATGC 2 cut(s) 384, 2040
MvaI CCWGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
MvnI CGCG 1 cut(s) 1787
NcoI CCATGG 2 cut(s) 2114, 3470
NdeI CATATG 5 cut(s) 718, 994, 3287, 3616, 3662
NlaIV GGNNCC 8 cut(s) 71, 226, 784, 898, 2380, 2928, 3217, 4038
NmeAIII GCCGAG 2 cut(s) 815, 2600
NmuCI GTSAC 6 cut(s) 334, 745, 1666, 2437, 3231, 3562
NsiI ATGCAT 3 cut(s) 964, 2042, 2164
NspI RCATGY 3 cut(s) 19, 1871, 2202
NspV TTCGAA 2 cut(s) 1507, 2520
OliI CACNNNNGTG 1 cut(s) 1236
PagI TCATGA 1 cut(s) 4000
PaqCI CACCTGC 1 cut(s) 602
PceI AGGCCT 1 cut(s) 630
PciI ACATGT 1 cut(s) 15
PciSI GCTCTTC 2 cut(s) 2517, 4228
PctI GAATGC 2 cut(s) 384, 2040
PdmI GAANNNNTTC 2 cut(s) 1503, 2526
PfoI TCCNGGA 1 cut(s) 3862
PleI GAGTC 3 cut(s) 827, 2593, 4474
PpsI GAGTC 3 cut(s) 827, 2593, 4474
PpuMI RGGWCCY 1 cut(s) 4036
PscI ACATGT 1 cut(s) 15
PshBI ATTAAT 1 cut(s) 2268
PsiI TTATAA 2 cut(s) 671, 3965
Psp124BI GAGCTC 2 cut(s) 2581, 3355
Psp5II RGGWCCY 1 cut(s) 4036
Psp6I CCWGG 6 cut(s) 44, 785, 801, 2445, 3242, 3862
PspEI GGTNACC 1 cut(s) 3562
PspFI CCCAGC 1 cut(s) 2461
PspGI CCWGG 6 cut(s) 44, 785, 801, 2445, 3242, 3862
PspN4I GGNNCC 8 cut(s) 71, 226, 784, 898, 2380, 2928, 3217, 4038
PspPI GGNCC 5 cut(s) 169, 1001, 3925, 4036, 4405
PspPPI RGGWCCY 1 cut(s) 4036
PstI CTGCAG 2 cut(s) 2874, 3280
PstNI CAGNNNCTG 1 cut(s) 427
PsuI RGATCY 5 cut(s) 174, 2239, 2626, 3807, 4505
RsaI GTAC 6 cut(s) 1298, 1407, 2089, 2868, 3710, 4496
RsaNI GTAC 6 cut(s) 1297, 1406, 2088, 2867, 3709, 4495
RseI CAYNNNNRTG 6 cut(s) 113, 503, 1236, 1424, 3059, 3224
SacI GAGCTC 2 cut(s) 2581, 3355
SapI GCTCTTC 2 cut(s) 2517, 4228
SaqAI TTAA 9 cut(s) 444, 461, 1301, 1967, 2193, 2268, 3125, 4007, 4220
Sau96I GGNCC 5 cut(s) 169, 1001, 3925, 4036, 4405
ScaI AGTACT 4 cut(s) 1407, 2868, 3710, 4496
SchI GAGTC 3 cut(s) 827, 2594, 4475
ScrFI CCNGG 6 cut(s) 46, 787, 803, 2447, 3244, 3864
SduI GDGCHC 5 cut(s) 102, 2569, 2581, 2663, 3355
SexAI ACCWGGT 1 cut(s) 2445
SfcI CTRYAG 4 cut(s) 2007, 2870, 3276, 3803
SfuI TTCGAA 2 cut(s) 1507, 2520
SinI GGWCC 3 cut(s) 1001, 4036, 4405
SmiMI CAYNNNNRTG 6 cut(s) 113, 503, 1236, 1424, 3059, 3224
SmlI CTYRAG 3 cut(s) 2622, 3463, 4244
SmoI CTYRAG 3 cut(s) 2622, 3463, 4244
SpeI ACTAGT 1 cut(s) 1235
SseBI AGGCCT 1 cut(s) 630
SsiI CCGC 9 cut(s) 1222, 1785, 2277, 3374, 3424, 3773, 4031, 4205, 4281
SspI AATATT 4 cut(s) 1930, 2146, 2542, 3302
SstI GAGCTC 2 cut(s) 2581, 3355
StuI AGGCCT 1 cut(s) 630
StyD4I CCNGG 6 cut(s) 44, 785, 801, 2445, 3242, 3862
StyI CCWWGG 7 cut(s) 130, 452, 1335, 1470, 2114, 3470, 4228
TaiI ACGT 2 cut(s) 1074, 3978
TaqI TCGA 8 cut(s) 21, 407, 1144, 1507, 2520, 3693, 4074, 4345
TatI WGTACW 4 cut(s) 1405, 2866, 3708, 4494
TauI GCSGC 1 cut(s) 3775
Tru1I TTAA 9 cut(s) 444, 461, 1301, 1967, 2193, 2268, 3125, 4007, 4220
Tru9I TTAA 9 cut(s) 444, 461, 1301, 1967, 2193, 2268, 3125, 4007, 4220
TseFI GTSAC 6 cut(s) 334, 745, 1666, 2437, 3231, 3562
Tsp45I GTSAC 6 cut(s) 334, 745, 1666, 2437, 3231, 3562
TspGWI ACGGA 5 cut(s) 342, 515, 2939, 3392, 3800
VneI GTGCAC 1 cut(s) 2659
VpaK11BI GGWCC 3 cut(s) 1001, 4036, 4405
VspI ATTAAT 1 cut(s) 2268
XagI CCTNNNNNAGG 3 cut(s) 800, 3920, 3951
XapI RAATTY 9 cut(s) 40, 1329, 1845, 1916, 2409, 3030, 3699, 4257, 4334
XbaI TCTAGA 3 cut(s) 2581, 2716, 4117
XceI RCATGY 3 cut(s) 19, 1871, 2202
XcmI CCANNNNNNNNNTGG 2 cut(s) 502, 3765
XmiI GTMKAC 3 cut(s) 417, 1266, 3073
XmnI GAANNNNTTC 2 cut(s) 1503, 2526
ZrmI AGTACT 4 cut(s) 1407, 2868, 3710, 4496
Zsp2I ATGCAT 3 cut(s) 964, 2042, 2164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.