ABC transporter C family member
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| ABC_membrane | PF00664 | 302 - 557 | 6.2e-27 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 622 - 756 | 5.8e-21 | ABC transporter |
| ABC_membrane | PF00664 | 934 - 1161 | 2.2e-32 | ABC transporter transmembrane region |
| ABC_tran | PF00005 | 1251 - 1399 | 5.4e-26 | ABC transporter |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 548 |
| Acc36I | ACCTGC | 2 cut(s) | 548, 2776 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 2849, 3692 |
| AccBSI | CCGCTC | 1 cut(s) | 2190 |
| AccII | CGCG | 1 cut(s) | 3244 |
| AciI | CCGC | 5 cut(s) | 1998, 2190, 3244, 3521, 4118 |
| AclWI | GGATC | 7 cut(s) | 1379, 1661, 1933, 2136, 3265, 3918, 4413 |
| AcoI | YGGCCR | 2 cut(s) | 487, 3683 |
| AcuI | CTGAAG | 4 cut(s) | 1334, 1427, 1636, 3507 |
| AdeI | CACNNNGTG | 1 cut(s) | 2906 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 187, 748, 2849, 3692, 3835, 3866 |
| AflII | CTTAAG | 2 cut(s) | 3919, 4157 |
| AflIII | ACRYGT | 1 cut(s) | 823 |
| AjnI | CCWGG | 2 cut(s) | 747, 2232 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2352, 2384, 2457, 2489 |
| AleI | CACNNNNGTG | 1 cut(s) | 1182 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1445, 1477, 2643, 2675 |
| Alw21I | GWGCWC | 5 cut(s) | 111, 1561, 2482, 2494, 2998 |
| Alw26I | GTCTC | 4 cut(s) | 530, 801, 808, 2828 |
| Alw44I | GTGCAC | 1 cut(s) | 107 |
| AlwI | GGATC | 7 cut(s) | 1379, 1661, 1933, 2136, 3265, 3918, 4413 |
| AoxI | GGCC | 5 cut(s) | 487, 1099, 3380, 3683, 3907 |
| ApaLI | GTGCAC | 1 cut(s) | 107 |
| ApeKI | GCWGC | 7 cut(s) | 426, 917, 1115, 1854, 2378, 2523, 3305 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 4119, 4151 |
| AseI | ATTAAT | 4 cut(s) | 903, 960, 2181, 3498 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 1717, 1758, 2439, 3612 |
| AspLEI | GCGC | 2 cut(s) | 3104, 3244 |
| AspS9I | GGNCC | 4 cut(s) | 178, 947, 3129, 4318 |
| AsuC2I | CCSGG | 1 cut(s) | 3777 |
| AsuII | TTCGAA | 1 cut(s) | 1420 |
| AvaII | GGWCC | 4 cut(s) | 178, 947, 3129, 4318 |
| BaeGI | GKGCMC | 2 cut(s) | 111, 376 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1887, 1920 |
| BalI | TGGCCA | 2 cut(s) | 489, 3685 |
| BanII | GRGCYC | 2 cut(s) | 2494, 3268 |
| BauI | CACGAG | 1 cut(s) | 2220 |
| BbsI | GAAGAC | 5 cut(s) | 575, 655, 1436, 2342, 3666 |
| Bbv12I | GWGCWC | 5 cut(s) | 111, 1561, 2482, 2494, 2998 |
| BbvI | GCAGC | 7 cut(s) | 438, 904, 1102, 1866, 2390, 2535, 3317 |
| BciT130I | CCWGG | 2 cut(s) | 749, 2234 |
| BciVI | GTATCC | 1 cut(s) | 2202 |
| BclI | TGATCA | 2 cut(s) | 3055, 3325 |
| BcnI | CCSGG | 1 cut(s) | 3777 |
| BcoDI | GTCTC | 4 cut(s) | 530, 801, 808, 2828 |
| BfrI | CTTAAG | 2 cut(s) | 3919, 4157 |
| BfuAI | ACCTGC | 2 cut(s) | 548, 2776 |
| BfuI | GTATCC | 1 cut(s) | 2202 |
| BglII | AGATCT | 1 cut(s) | 2152 |
| BisI | GCNGC | 8 cut(s) | 427, 918, 1116, 1855, 2379, 2524, 3245, 3306 |
| BlsI | GCNGC | 8 cut(s) | 428, 919, 1117, 1856, 2380, 2525, 3246, 3307 |
| BmcAI | AGTACT | 4 cut(s) | 153, 2781, 3623, 4409 |
| Bme1390I | CCNGG | 3 cut(s) | 749, 2234, 3777 |
| Bme18I | GGWCC | 4 cut(s) | 178, 947, 3129, 4318 |
| BmgT120I | GGNCC | 4 cut(s) | 178, 947, 3129, 4318 |
| BmiI | GGNNCC | 6 cut(s) | 80, 844, 1042, 2841, 3130, 3267 |
| BmrFI | CCNGG | 3 cut(s) | 749, 2234, 3777 |
| BpiI | GAAGAC | 5 cut(s) | 575, 655, 1436, 2342, 3666 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 2126, 2158, 3969, 4001, 3989, 4021 |
| BpmI | CTGGAG | 3 cut(s) | 65, 2169, 4132 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1003 |
| Bpu14I | TTCGAA | 1 cut(s) | 1420 |
| BpuEI | CTTGAG | 2 cut(s) | 2153, 3361 |
| BpuMI | CCSGG | 1 cut(s) | 3777 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2247 |
| BsaJI | CCNNGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| BsaWI | WCCGGW | 1 cut(s) | 3181 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 2524, 2554, 4105, 4135 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 187, 748, 2849, 3692, 3835, 3866 |
| Bse1I | ACTGG | 9 cut(s) | 208, 1363, 1508, 2711, 2747, 3031, 3243, 3686, 4115 |
| Bse3DI | GCAATG | 6 cut(s) | 1079, 3132, 3411, 3507, 3586, 4151 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2247 |
| BseBI | CCWGG | 2 cut(s) | 749, 2234 |
| BseDI | CCNNGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| BseGI | GGATG | 8 cut(s) | 383, 533, 1266, 1401, 1774, 2242, 2811, 4189 |
| BseJI | GATNNNNATC | 1 cut(s) | 2247 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 187, 748, 2849, 3692, 3835, 3866 |
| BseMI | GCAATG | 6 cut(s) | 1079, 3132, 3411, 3507, 3586, 4151 |
| BseNI | ACTGG | 9 cut(s) | 208, 1363, 1508, 2711, 2747, 3031, 3243, 3686, 4115 |
| BseRI | GAGGAG | 2 cut(s) | 605, 2134 |
| BseSI | GKGCMC | 2 cut(s) | 111, 376 |
| BseXI | GCAGC | 7 cut(s) | 438, 904, 1102, 1866, 2390, 2535, 3317 |
| BseYI | CCCAGC | 2 cut(s) | 760, 2374 |
| BsgI | GTGCAG | 1 cut(s) | 2244 |
| Bsh1236I | CGCG | 1 cut(s) | 3244 |
| BshFI | GGCC | 5 cut(s) | 489, 1101, 3382, 3685, 3909 |
| BsiHKAI | GWGCWC | 5 cut(s) | 111, 1561, 2482, 2494, 2998 |
| BsiSI | CCGG | 3 cut(s) | 55, 3182, 3777 |
| BslFI | GGGAC | 6 cut(s) | 575, 743, 1466, 1930, 1996, 3142 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 187, 748, 2849, 3692, 3835, 3866 |
| BsmAI | GTCTC | 4 cut(s) | 530, 801, 808, 2828 |
| BsmBI | CGTCTC | 1 cut(s) | 2828 |
| BsmFI | GGGAC | 6 cut(s) | 575, 743, 1466, 1930, 1996, 3142 |
| BsmI | GAATGC | 1 cut(s) | 2075 |
| BsnI | GGCC | 5 cut(s) | 489, 1101, 3382, 3685, 3909 |
| Bsp119I | TTCGAA | 1 cut(s) | 1420 |
| Bsp1286I | GDGCHC | 7 cut(s) | 111, 376, 1561, 2482, 2494, 2998, 3268 |
| Bsp1407I | TGTACA | 2 cut(s) | 21, 3767 |
| Bsp19I | CCATGG | 3 cut(s) | 484, 2027, 3383 |
| BspACI | CCGC | 5 cut(s) | 1998, 2190, 3244, 3521, 4118 |
| BspANI | GGCC | 5 cut(s) | 489, 1101, 3382, 3685, 3909 |
| BspFNI | CGCG | 1 cut(s) | 3244 |
| BspHI | TCATGA | 1 cut(s) | 3913 |
| BspLI | GGNNCC | 6 cut(s) | 80, 844, 1042, 2841, 3130, 3267 |
| BspMAI | CTGCAG | 4 cut(s) | 2787, 3193, 3621, 3720 |
| BspMI | ACCTGC | 2 cut(s) | 548, 2776 |
| BspPI | GGATC | 7 cut(s) | 1379, 1661, 1933, 2136, 3265, 3918, 4413 |
| BspQI | GCTCTTC | 2 cut(s) | 2430, 4141 |
| BspT104I | TTCGAA | 1 cut(s) | 1420 |
| BspTI | CTTAAG | 2 cut(s) | 3919, 4157 |
| BsrBI | CCGCTC | 1 cut(s) | 2190 |
| BsrDI | GCAATG | 6 cut(s) | 1079, 3132, 3411, 3507, 3586, 4151 |
| BsrGI | TGTACA | 2 cut(s) | 21, 3767 |
| BsrI | ACTGG | 9 cut(s) | 208, 1363, 1508, 2711, 2747, 3031, 3243, 3686, 4115 |
| BssECI | CCNNGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| BssSI | CACGAG | 1 cut(s) | 2220 |
| BssT1I | CCWWGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| Bst2BI | CACGAG | 1 cut(s) | 2220 |
| Bst2UI | CCWGG | 2 cut(s) | 749, 2234 |
| Bst6I | CTCTTC | 6 cut(s) | 684, 1883, 2430, 2664, 4065, 4141 |
| BstAFI | CTTAAG | 2 cut(s) | 3919, 4157 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 926, 2945 |
| BstAUI | TGTACA | 2 cut(s) | 21, 3767 |
| BstBI | TTCGAA | 1 cut(s) | 1420 |
| BstC8I | GCNNGC | 7 cut(s) | 215, 356, 491, 2919, 3555, 3668, 4062 |
| BstDSI | CCRYGG | 3 cut(s) | 484, 2027, 3383 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 746, 3833, 3864 |
| BstF5I | GGATG | 8 cut(s) | 383, 533, 1266, 1401, 1774, 2242, 2811, 4189 |
| BstFNI | CGCG | 1 cut(s) | 3244 |
| BstHHI | GCGC | 2 cut(s) | 3104, 3244 |
| BstMAI | GTCTC | 4 cut(s) | 530, 801, 808, 2828 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 914, 926, 2279, 2945, 3002, 3305, 3518, 3906 |
| BstNI | CCWGG | 2 cut(s) | 749, 2234 |
| BstNSI | RCATGY | 3 cut(s) | 358, 827, 2115 |
| BstSCI | CCNGG | 3 cut(s) | 747, 2232, 3775 |
| BstSLI | GKGCMC | 2 cut(s) | 111, 376 |
| BstUI | CGCG | 1 cut(s) | 3244 |
| BstV1I | GCAGC | 7 cut(s) | 438, 904, 1102, 1866, 2390, 2535, 3317 |
| BstV2I | GAAGAC | 5 cut(s) | 575, 655, 1436, 2342, 3666 |
| BstX2I | RGATCY | 5 cut(s) | 1666, 2128, 2152, 3923, 4418 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1184, 3681 |
| BstYI | RGATCY | 5 cut(s) | 1666, 2128, 2152, 3923, 4418 |
| BsuI | GTATCC | 1 cut(s) | 2202 |
| BsuRI | GGCC | 5 cut(s) | 489, 1101, 3382, 3685, 3909 |
| BtgI | CCRYGG | 3 cut(s) | 484, 2027, 3383 |
| BtsCI | GGATG | 8 cut(s) | 383, 533, 1266, 1401, 1774, 2242, 2811, 4189 |
| BtsI | GCAGTG | 1 cut(s) | 3144 |
| BveI | ACCTGC | 2 cut(s) | 548, 2776 |
| Cac8I | GCNNGC | 7 cut(s) | 215, 356, 491, 2919, 3555, 3668, 4062 |
| CciI | TCATGA | 1 cut(s) | 3913 |
| CfoI | GCGC | 2 cut(s) | 3104, 3244 |
| Cfr13I | GGNCC | 4 cut(s) | 178, 947, 3129, 4318 |
| DraIII | CACNNNGTG | 1 cut(s) | 2906 |
| EaeI | YGGCCR | 2 cut(s) | 487, 3683 |
| Eam1104I | CTCTTC | 6 cut(s) | 684, 1883, 2430, 2664, 4065, 4141 |
| EarI | CTCTTC | 6 cut(s) | 684, 1883, 2430, 2664, 4065, 4141 |
| Ecl136II | GAGCTC | 1 cut(s) | 2492 |
| Eco130I | CCWWGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| Eco147I | AGGCCT | 1 cut(s) | 1101 |
| Eco24I | GRGCYC | 2 cut(s) | 2494, 3268 |
| Eco32I | GATATC | 2 cut(s) | 1125, 1216 |
| Eco47I | GGWCC | 4 cut(s) | 178, 947, 3129, 4318 |
| Eco53kI | GAGCTC | 1 cut(s) | 2492 |
| Eco57I | CTGAAG | 4 cut(s) | 1334, 1427, 1636, 3507 |
| EcoICRI | GAGCTC | 1 cut(s) | 2492 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 746, 3833, 3864 |
| EcoRI | GAATTC | 4 cut(s) | 2322, 3612, 4170, 4247 |
| EcoRII | CCWGG | 2 cut(s) | 747, 2232 |
| EcoRV | GATATC | 2 cut(s) | 1125, 1216 |
| EcoT14I | CCWWGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| EcoT22I | ATGCAT | 2 cut(s) | 1955, 2077 |
| EcoT38I | GRGCYC | 2 cut(s) | 2494, 3268 |
| ErhI | CCWWGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| Esp3I | CGTCTC | 1 cut(s) | 2828 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 663, 695, 1130, 1162, 3633, 3665 |
| FaqI | GGGAC | 6 cut(s) | 575, 743, 1466, 1930, 1996, 3142 |
| FauI | CCCGC | 1 cut(s) | 4111 |
| FauNDI | CATATG | 6 cut(s) | 664, 805, 940, 3200, 3529, 3575 |
| FbaI | TGATCA | 2 cut(s) | 3055, 3325 |
| Fnu4HI | GCNGC | 8 cut(s) | 427, 918, 1116, 1855, 2379, 2524, 3245, 3306 |
| FokI | GGATG | 8 cut(s) | 370, 520, 1273, 1408, 1781, 2249, 2818, 4196 |
| FriOI | GRGCYC | 2 cut(s) | 2494, 3268 |
| Fsp4HI | GCNGC | 8 cut(s) | 427, 918, 1116, 1855, 2379, 2524, 3245, 3306 |
| GlaI | GCGC | 2 cut(s) | 3103, 3243 |
| GluI | GCNGC | 8 cut(s) | 427, 918, 1116, 1855, 2379, 2524, 3245, 3306 |
| GsaI | CCCAGC | 2 cut(s) | 764, 2378 |
| GsuI | CTGGAG | 3 cut(s) | 65, 2169, 4132 |
| HaeIII | GGCC | 5 cut(s) | 489, 1101, 3382, 3685, 3909 |
| HapII | CCGG | 3 cut(s) | 55, 3182, 3777 |
| HhaI | GCGC | 2 cut(s) | 3104, 3244 |
| Hin6I | GCGC | 2 cut(s) | 3102, 3242 |
| HinP1I | GCGC | 2 cut(s) | 3102, 3242 |
| HindIII | AAGCTT | 2 cut(s) | 2428, 3555 |
| HpaII | CCGG | 3 cut(s) | 55, 3182, 3777 |
| Hpy166II | GTNNAC | 5 cut(s) | 109, 973, 2230, 2704, 2900 |
| Hpy8I | GTNNAC | 5 cut(s) | 109, 973, 2230, 2704, 2900 |
| HpyCH4IV | ACGT | 1 cut(s) | 1698 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 914, 926, 2279, 2945, 3002, 3305, 3518, 3906 |
| HpySE526I | ACGT | 1 cut(s) | 1698 |
| HspAI | GCGC | 2 cut(s) | 3102, 3242 |
| Ksp22I | TGATCA | 2 cut(s) | 3055, 3325 |
| LguI | GCTCTTC | 2 cut(s) | 2430, 4141 |
| LmnI | GCTCC | 6 cut(s) | 84, 1040, 1556, 2839, 3271, 3302 |
| Lsp1109I | GCAGC | 7 cut(s) | 438, 904, 1102, 1866, 2390, 2535, 3317 |
| MaeII | ACGT | 1 cut(s) | 1698 |
| MbiI | CCGCTC | 1 cut(s) | 2190 |
| MfeI | CAATTG | 3 cut(s) | 1533, 2829, 4200 |
| MflI | RGATCY | 5 cut(s) | 1666, 2128, 2152, 3923, 4418 |
| MhlI | GDGCHC | 7 cut(s) | 111, 376, 1561, 2482, 2494, 2998, 3268 |
| MlsI | TGGCCA | 2 cut(s) | 489, 3685 |
| MluNI | TGGCCA | 2 cut(s) | 489, 3685 |
| MlyI | GAGTC | 6 cut(s) | 532, 773, 1856, 2694, 3472, 3924 |
| MmeI | TCCRAC | 4 cut(s) | 709, 925, 2567, 3673 |
| Mox20I | TGGCCA | 2 cut(s) | 489, 3685 |
| Mph1103I | ATGCAT | 2 cut(s) | 1955, 2077 |
| MroXI | GAANNNNTTC | 4 cut(s) | 1717, 1758, 2439, 3612 |
| MscI | TGGCCA | 2 cut(s) | 489, 3685 |
| MslI | CAYNNNNRTG | 8 cut(s) | 122, 284, 359, 449, 804, 1182, 2972, 3137 |
| Msp20I | TGGCCA | 2 cut(s) | 489, 3685 |
| MspA1I | CMGCKG | 2 cut(s) | 785, 1998 |
| MspCI | CTTAAG | 2 cut(s) | 3919, 4157 |
| MspI | CCGG | 3 cut(s) | 55, 3182, 3777 |
| MspR9I | CCNGG | 3 cut(s) | 749, 2234, 3777 |
| MunI | CAATTG | 3 cut(s) | 1533, 2829, 4200 |
| Mva1269I | GAATGC | 1 cut(s) | 2075 |
| MvaI | CCWGG | 2 cut(s) | 749, 2234 |
| MvnI | CGCG | 1 cut(s) | 3244 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 914, 926, 2279, 2945, 3002, 3305, 3518, 3906 |
| NciI | CCSGG | 1 cut(s) | 3777 |
| NcoI | CCATGG | 3 cut(s) | 484, 2027, 3383 |
| NdeI | CATATG | 6 cut(s) | 664, 805, 940, 3200, 3529, 3575 |
| NlaIV | GGNNCC | 6 cut(s) | 80, 844, 1042, 2841, 3130, 3267 |
| NmeAIII | GCCGAG | 1 cut(s) | 2513 |
| NmuCI | GTSAC | 7 cut(s) | 1515, 1579, 2350, 3144, 3475, 4267, 4325 |
| NsiI | ATGCAT | 2 cut(s) | 1955, 2077 |
| NspI | RCATGY | 3 cut(s) | 358, 827, 2115 |
| NspV | TTCGAA | 1 cut(s) | 1420 |
| OliI | CACNNNNGTG | 1 cut(s) | 1182 |
| PaeI | GCATGC | 1 cut(s) | 358 |
| PagI | TCATGA | 1 cut(s) | 3913 |
| PaqCI | CACCTGC | 1 cut(s) | 548 |
| PceI | AGGCCT | 1 cut(s) | 1101 |
| PciI | ACATGT | 1 cut(s) | 823 |
| PciSI | GCTCTTC | 2 cut(s) | 2430, 4141 |
| PctI | GAATGC | 1 cut(s) | 2075 |
| PdmI | GAANNNNTTC | 4 cut(s) | 1717, 1758, 2439, 3612 |
| PflFI | GACNNNGTC | 1 cut(s) | 2084 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 2849, 3692 |
| PfoI | TCCNGGA | 1 cut(s) | 3775 |
| PkrI | GCNGC | 8 cut(s) | 428, 919, 1117, 1856, 2380, 2525, 3246, 3307 |
| PleI | GAGTC | 6 cut(s) | 531, 773, 1855, 2693, 3472, 3924 |
| PpsI | GAGTC | 6 cut(s) | 531, 773, 1855, 2693, 3472, 3924 |
| PscI | ACATGT | 1 cut(s) | 823 |
| PshBI | ATTAAT | 4 cut(s) | 903, 960, 2181, 3498 |
| Psp124BI | GAGCTC | 1 cut(s) | 2494 |
| Psp6I | CCWGG | 2 cut(s) | 747, 2232 |
| PspFI | CCCAGC | 2 cut(s) | 760, 2374 |
| PspGI | CCWGG | 2 cut(s) | 747, 2232 |
| PspN4I | GGNNCC | 6 cut(s) | 80, 844, 1042, 2841, 3130, 3267 |
| PspPI | GGNCC | 4 cut(s) | 178, 947, 3129, 4318 |
| PstI | CTGCAG | 4 cut(s) | 2787, 3193, 3621, 3720 |
| PsuI | RGATCY | 5 cut(s) | 1666, 2128, 2152, 3923, 4418 |
| PsyI | GACNNNGTC | 1 cut(s) | 2084 |
| PvuII | CAGCTG | 1 cut(s) | 785 |
| RseI | CAYNNNNRTG | 8 cut(s) | 122, 284, 359, 449, 804, 1182, 2972, 3137 |
| SacI | GAGCTC | 1 cut(s) | 2494 |
| SapI | GCTCTTC | 2 cut(s) | 2430, 4141 |
| SatI | GCNGC | 8 cut(s) | 427, 918, 1116, 1855, 2379, 2524, 3245, 3306 |
| Sau96I | GGNCC | 4 cut(s) | 178, 947, 3129, 4318 |
| ScaI | AGTACT | 4 cut(s) | 153, 2781, 3623, 4409 |
| SchI | GAGTC | 6 cut(s) | 532, 773, 1856, 2694, 3472, 3924 |
| ScrFI | CCNGG | 3 cut(s) | 749, 2234, 3777 |
| SduI | GDGCHC | 7 cut(s) | 111, 376, 1561, 2482, 2494, 2998, 3268 |
| SfuI | TTCGAA | 1 cut(s) | 1420 |
| SinI | GGWCC | 4 cut(s) | 178, 947, 3129, 4318 |
| SmiMI | CAYNNNNRTG | 8 cut(s) | 122, 284, 359, 449, 804, 1182, 2972, 3137 |
| SmlI | CTYRAG | 4 cut(s) | 2132, 3376, 3919, 4157 |
| SmoI | CTYRAG | 4 cut(s) | 2132, 3376, 3919, 4157 |
| SphI | GCATGC | 1 cut(s) | 358 |
| SseBI | AGGCCT | 1 cut(s) | 1101 |
| SsiI | CCGC | 5 cut(s) | 1998, 2190, 3244, 3521, 4118 |
| SspI | AATATT | 2 cut(s) | 1843, 3215 |
| SstI | GAGCTC | 1 cut(s) | 2494 |
| StuI | AGGCCT | 1 cut(s) | 1101 |
| StyD4I | CCNGG | 3 cut(s) | 747, 2232, 3775 |
| StyI | CCWWGG | 8 cut(s) | 139, 398, 484, 1281, 1383, 2027, 3383, 4141 |
| TaiI | ACGT | 1 cut(s) | 1701 |
| TaqI | TCGA | 6 cut(s) | 496, 997, 1420, 2079, 3012, 3987 |
| TaqII | GACCGA | 1 cut(s) | 4272 |
| TatI | WGTACW | 6 cut(s) | 21, 151, 2779, 3621, 3767, 4407 |
| TauI | GCSGC | 1 cut(s) | 3247 |
| TseFI | GTSAC | 7 cut(s) | 1515, 1579, 2350, 3144, 3475, 4267, 4325 |
| TseI | GCWGC | 7 cut(s) | 426, 917, 1115, 1854, 2378, 2523, 3305 |
| Tsp45I | GTSAC | 7 cut(s) | 1515, 1579, 2350, 3144, 3475, 4267, 4325 |
| TspGWI | ACGGA | 4 cut(s) | 203, 2852, 3305, 4344 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2084 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 2849, 3692 |
| Vha464I | CTTAAG | 2 cut(s) | 3919, 4157 |
| VneI | GTGCAC | 1 cut(s) | 107 |
| VpaK11BI | GGWCC | 4 cut(s) | 178, 947, 3129, 4318 |
| VspI | ATTAAT | 4 cut(s) | 903, 960, 2181, 3498 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 746, 3833, 3864 |
| XbaI | TCTAGA | 2 cut(s) | 2494, 3889 |
| XceI | RCATGY | 3 cut(s) | 358, 827, 2115 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 448, 3678 |
| XmnI | GAANNNNTTC | 4 cut(s) | 1717, 1758, 2439, 3612 |
| ZrmI | AGTACT | 4 cut(s) | 153, 2781, 3623, 4409 |
| Zsp2I | ATGCAT | 2 cut(s) | 1955, 2077 |