Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000900

Physical Location & Seq

Genomic Coordinates Forward (+)

25944430 .. 25961208

Gene Structure 16779 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00103400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1950 bp

ATGGAGAAGAATAAGTATGAAAAGACCATAGAAGCTTGTGCTTTGGATAAGGACCTTAGTAGTTTTGACCATGGTGATCTTACTGAAATAGGCGAGAGAGGGCTTAACTTGAGCGGAGGACAGAAGCAGAGAGGATTCCGCTGGCGCGAGCTGTTTATAGATTATGTAATGGCTGCTCTGGCACAGAAAACTGTAATTCTAGTGACTCATCAAGTTGAATTTCTCTCAAAAGTCGATAAGATTTTGGTAATGGAACATGGACAAATTACTGAATCAGGAAACTTTGAGAATCTCTTGACCGCAGGAACAGCATTTGAGCAACTTGTTAATGCTCACCGAGATGCAGTGACATCAGGTACTTCAAATTATCAAAGTCAGGGAGCATTCAAGAAGGAAGAAATGGTTGTTCCGGAGGAGTCCTTTCGGATTAACCTCAATGAAGATAGCAGTGAAGGGGATATTTCTGCGAAGGGCGTACCTGGGGTGCAACTAATAGAAGAAGAAGAGAAAGAGACCGATGATGCTTCATCAGATTTAAGTATTTTGGATTTTGACATACCCTTCTCCATTTTCTTTATTGTTGCTGGTGGCATTGAAATGCTGACAACAATTGGAATTATGGCTTCTGTCACATGGCAAGTTCTTATTGTAGCCATTCTCGCCATGGTTGCTGCCAAATATGTTCAGAGCTACTATCTAGCGTCTGCAAGAGAATTGATAAGAATCAATGGAACAACCAAAGCTCCTGTAATGAATTATGCAGCTGAGACATCACTCGGAGTGTTCACTATAAGAGCTTTTAAAATGGTAGACAGGTTCTTTGACAACTATACAAAGCTAGTTGACACTGATGCAAGGCTCTTTTTTCATTCTAATGCAACCATGGAGTGGTTAATAATAAGGACAGAAGCACTTCAGAATTTGACCCTTTTCGCTGCTGCTTTACTCCTCATTTTACTTCCCAAGGGTTATGTTGCTCCAGGGCTTGTGGGGCTTTCTCTTTCTTATTCTTTGACACTGACCGGAGCACAAATATTTGTGACTCGATGGTATTGCAACTTATCGAATTACATTATATCAGTTGAAAGGATAAAACAGTTCATGCAGATTTCACCAGAGCCTCCAGCAATTGTGGAGGACAAGAGGCCCCCATATTCATGGCCTCAAAAGGGTAGAATAGAGCTTTATTCACTGAAGTTAAATTACCGTCCAAATGCTCCACTAGTTCTCAAGGGAATTACATGCACATTCAACGAAGGGACTAGAGTAGGGGTTGTGGGAAGGACAGGAAGTGGAAAGACTACACTCATAAGTGCTTTGTTTCGTTTAGTAGAGCCAAGCAGTGGTAAAATTATTATAGACGGACTTGACATCTGCTCTATGGGTCTAAAGGATTTAAGAATGAAGCTCAGTATCATCCCTCAAGAACCAACTCTTTTTAGGGGTAGCATCCGAACCAACTTGGATCCTTTAGGCCTTTACTCCGACAATGAAATATGGAGGGCTCTAGAGAAGTGCCAACTACAGGCAACAGTCAATAGCCTACCCAATTTACTAGATTCATCTGTAAGTGATGAAGGGGAAAATTGGAGCGCCGGGCAGCGCCAGTTGTTTTGCCTTGGAAGAGTGCTTCTCAAGAGGAACAGAATTCTAGTTCTGGATGAGGCTACTGCTTCCATCGACTCTGGAACAGATGCCACTCTTCAAAGAATCGTCAGGCAGGAATTTGCAGAATGCACTGTGATAACTGTAGCTCATAGAGTTCCAACAGTCATAGACAGTGACAAAGTCATGGTCCTCTGTGATGCAGCGACTTACGTTTCCACTATAGACATCCAATCTCCGGTGGGTAAGCGTCTTTTCGAGAGGATCCAAAAAATAGGCGGTGCCTTGGGCGGGATCAACAATTTGTTGATGAGCTATGAATCTGAAAAGCGTAAAAGTGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0008150 GO:0015399 GO:0015405 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0022804 GO:0022857 GO:0031090 GO:0042623 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

ko01523 ko01524 ko02010 ko04976 map01523 map01524 map02010 map04976

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

649

Amino Acids

72.05

Weight (kDa)

5.44

Isoelectric Point (pI)

36.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	176 - 343	2.8e-12	ABC transporter transmembrane region
ABC_tran	PF00005	410 - 558	2.1e-26	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000900)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G60160 AT3G60160 AT3G60160 AT3G60970
fragaria_vesca	FvH4_7g08440 FvH4_7g08440 FvH4_7g08440 FvH4_7g08440 FvH4_7g08440
malus_domestica	MD07G1084200.v1.1 MD10G1255100.v1.1
prunus_persica	Prupe.1G236000_v2.0.a1 Prupe.2G111400_v2.0.a1 Prupe.2G111500_v2.0.a1 Prupe.2G111500_v2.0.a1 Prupe.3G051700_v2.0.a1
pyrus_communis	pycom06g09440 pycom07g06810 pycom11g17670 pycom17g18290
rosa_chinensis	RchiOBHm_Chr0c20g0500261 RchiOBHm_Chr0c20g0500281 RchiOBHm_Chr0c20g0500291 RchiOBHm_Chr0c20g0500301 RchiOBHm_Chr1g0340111 RchiOBHm_Chr1g0340151 RchiOBHm_Chr1g0379771 RchiOBHm_Chr1g0379811 RchiOBHm_Chr2g0142731
rosa_laevigata	RLG00000019981 RLG00000028992 RLG00000028994
rosa_multiflora	Rmu_co8369783.1_g000001 Rmu_sc0001169.1_g000006 Rmu_sc0002271.1_g000020 Rmu_sc0002445.1_g000001 Rmu_sc0003314.1_g000032 Rmu_sc0007885.1_g000002 Rmu_sc0009445.1_g000014 Rmu_sc0010800.1_g000006 Rmu_sc0014259.1_g000009 Rmu_sc0017947.1_g000001 Rmu_sc0037710.1_g000001 Rmu_sc0037845.1_g000001
rosa_roxburghii	Rroxscaffold_1G00034690 Rroxscaffold_2G00102360 Rroxscaffold_2G00103400 Rroxscaffold_3G00260100 Rroxscaffold_4G00310980 Rroxscaffold_4G00311010 Rroxscaffold_5G00372900
rosa_rugosa	Rorug01G0165500 Rorug01G0165600
rosa_samantha	Rh1BG149000 Rh1BG149500 Rh1CG167500 Rh1CG167800 Rh1DG181300 Rh2AG427400 Rh2AG427500 Rh2BG437200 Rh2DG446900 Rh4BG313900
rosa_wichuraiana	Rw1G015010 Rw1G015040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1886
AccB7I	CCANNNNNTGG	2 cut(s)	888, 1343
AccBSI	CCGCTC	1 cut(s)	114
AccI	GTMKAC	1 cut(s)	810
AccII	CGCG	1 cut(s)	147
AccIII	TCCGGA	1 cut(s)	409
AciI	CCGC	5 cut(s)	114, 139, 300, 1884, 1896
AclWI	GGATC	5 cut(s)	1460, 1473, 1864, 1877, 1907
AcsI	RAATTY	4 cut(s)	218, 919, 1647, 1724
AcuI	CTGAAG	2 cut(s)	899, 1214
AfaI	GTAC	2 cut(s)	358, 477
AfiI	CCNNNNNNNGG	6 cut(s)	888, 1169, 1343, 1525, 1843, 1896
AgsI	TTSAA	7 cut(s)	218, 363, 388, 596, 1085, 1252, 1706
AhlI	ACTAGT	1 cut(s)	1222
AjnI	CCWGG	2 cut(s)	478, 979
Alw21I	GWGCWC	1 cut(s)	1030
Alw26I	GTCTC	2 cut(s)	506, 761
AlwI	GGATC	5 cut(s)	1460, 1473, 1864, 1877, 1907
Aor13HI	TCCGGA	1 cut(s)	409
AoxI	GGCC	3 cut(s)	1145, 1160, 1474
ApeKI	GCWGC	7 cut(s)	173, 671, 761, 935, 938, 1600, 1808
ApoI	RAATTY	4 cut(s)	218, 919, 1647, 1724
ArsI	GACNNNNNNTTYG	4 cut(s)	803, 835, 1779, 1811
Asp700I	GAANNNNTTC	1 cut(s)	912
AspLEI	GCGC	3 cut(s)	147, 1595, 1605
AspS9I	GGNCC	3 cut(s)	52, 1146, 1795
AsuC2I	CCSGG	1 cut(s)	1597
AsuHPI	GGTGA	3 cut(s)	86, 326, 1104
AvaII	GGWCC	2 cut(s)	52, 1795
BamHI	GGATCC	2 cut(s)	1465, 1869
BanI	GGYRCC	1 cut(s)	1886
BanII	GRGCYC	1 cut(s)	1507
BarI	GAAGNNNNNNTAC	2 cut(s)	1187, 1219
Bbv12I	GWGCWC	1 cut(s)	1030
BbvI	GCAGC	7 cut(s)	160, 658, 773, 922, 925, 1612, 1820
BccI	CCATC	2 cut(s)	1041, 1685
BcgI	CGANNNNNNTGC	2 cut(s)	1035, 1069
BciT130I	CCWGG	2 cut(s)	480, 981
BcnI	CCSGG	1 cut(s)	1597
BcoDI	GTCTC	2 cut(s)	506, 761
BcuI	ACTAGT	1 cut(s)	1222
BfaI	CTAG	8 cut(s)	200, 698, 839, 1223, 1263, 1508, 1556, 1652
BfmI	CTRYAG	3 cut(s)	1523, 1749, 1827
BfoI	RGCGCY	2 cut(s)	1596, 1606
BisI	GCNGC	7 cut(s)	174, 672, 762, 936, 939, 1601, 1809
BlsI	GCNGC	7 cut(s)	175, 673, 763, 937, 940, 1602, 1810
Bme1390I	CCNGG	3 cut(s)	480, 981, 1597
Bme18I	GGWCC	2 cut(s)	52, 1795
BmgT120I	GGNCC	3 cut(s)	52, 1146, 1795
BmiI	GGNNCC	4 cut(s)	1148, 1467, 1871, 1888
BmrFI	CCNGG	3 cut(s)	480, 981, 1597
BmsI	GCATC	6 cut(s)	331, 511, 841, 1458, 1684, 1795
BplI	GAGNNNNNCTC	2 cut(s)	1617, 1649
BpmI	CTGGAG	2 cut(s)	963, 1107
BpuEI	CTTGAG	4 cut(s)	130, 1214, 1407, 1619
BpuMI	CCSGG	1 cut(s)	1597
BsaBI	GATNNNNATC	1 cut(s)	722
BsaI	GGTCTC	1 cut(s)	506
BsaJI	CCNNGG	8 cut(s)	70, 479, 663, 882, 963, 980, 1618, 1890
BsaWI	WCCGGW	3 cut(s)	409, 1022, 1843
BsaXI	ACNNNNNCTCC	2 cut(s)	727, 757
Bsc4I	CCNNNNNNNGG	6 cut(s)	888, 1169, 1343, 1525, 1843, 1896
Bse1I	ACTGG	1 cut(s)	1606
Bse8I	GATNNNNATC	1 cut(s)	722
BseAI	TCCGGA	1 cut(s)	409
BseBI	CCWGG	2 cut(s)	480, 981
BseDI	CCNNGG	8 cut(s)	70, 479, 663, 882, 963, 980, 1618, 1890
BseGI	GGATG	4 cut(s)	1416, 1449, 1666, 1833
BseJI	GATNNNNATC	1 cut(s)	722
BseLI	CCNNNNNNNGG	6 cut(s)	888, 1169, 1343, 1525, 1843, 1896
BseMII	CTCAG	2 cut(s)	756, 1423
BseNI	ACTGG	1 cut(s)	1606
BseRI	GAGGAG	2 cut(s)	428, 938
BseXI	GCAGC	7 cut(s)	160, 658, 773, 922, 925, 1612, 1820
Bsh1236I	CGCG	1 cut(s)	147
BshFI	GGCC	3 cut(s)	1147, 1162, 1476
BshNI	GGYRCC	1 cut(s)	1886
BsiHKAI	GWGCWC	1 cut(s)	1030
BsiSI	CCGG	4 cut(s)	410, 1023, 1596, 1844
BslFI	GGGAC	1 cut(s)	1273
BslI	CCNNNNNNNGG	6 cut(s)	888, 1169, 1343, 1525, 1843, 1896
BsmAI	GTCTC	2 cut(s)	506, 761
BsmFI	GGGAC	1 cut(s)	1273
BsmI	GAATGC	2 cut(s)	383, 1739
BsnI	GGCC	3 cut(s)	1147, 1162, 1476
Bso31I	GGTCTC	1 cut(s)	506
Bsp1286I	GDGCHC	2 cut(s)	1030, 1507
Bsp13I	TCCGGA	1 cut(s)	409
Bsp143I	GATC	4 cut(s)	76, 1465, 1869, 1899
Bsp19I	CCATGG	3 cut(s)	70, 663, 882
BspACI	CCGC	5 cut(s)	114, 139, 300, 1884, 1896
BspANI	GGCC	3 cut(s)	1147, 1162, 1476
BspCNI	CTCAG	2 cut(s)	757, 1422
BspEI	TCCGGA	1 cut(s)	409
BspFNI	CGCG	1 cut(s)	147
BspLI	GGNNCC	4 cut(s)	1148, 1467, 1871, 1888
BspPI	GGATC	5 cut(s)	1460, 1473, 1864, 1877, 1907
BspT107I	GGYRCC	1 cut(s)	1886
BspTNI	GGTCTC	1 cut(s)	506
BsrBI	CCGCTC	1 cut(s)	114
BsrI	ACTGG	1 cut(s)	1606
BssECI	CCNNGG	8 cut(s)	70, 479, 663, 882, 963, 980, 1618, 1890
BssMI	GATC	4 cut(s)	76, 1465, 1869, 1899
BssT1I	CCWWGG	6 cut(s)	70, 663, 882, 963, 1618, 1890
Bst2UI	CCWGG	2 cut(s)	480, 981
Bst4CI	ACNGT	8 cut(s)	193, 1098, 1208, 1534, 1741, 1750, 1771, 1781
Bst6I	CTCTTC	3 cut(s)	498, 1618, 1707
BstC8I	GCNNGC	2 cut(s)	143, 149
BstDEI	CTNAG	3 cut(s)	56, 765, 1409
BstDSI	CCRYGG	3 cut(s)	70, 663, 882
BstF5I	GGATG	4 cut(s)	1416, 1449, 1666, 1833
BstFNI	CGCG	1 cut(s)	147
BstH2I	RGCGCY	2 cut(s)	1596, 1606
BstHHI	GCGC	3 cut(s)	147, 1595, 1605
BstKTI	GATC	4 cut(s)	79, 1468, 1872, 1902
BstMAI	GTCTC	2 cut(s)	506, 761
BstMBI	GATC	4 cut(s)	76, 1465, 1869, 1899
BstMWI	GCNNNNNNNGC	5 cut(s)	179, 308, 659, 668, 991
BstNI	CCWGG	2 cut(s)	480, 981
BstNSI	RCATGY	1 cut(s)	1245
BstSCI	CCNGG	3 cut(s)	478, 979, 1595
BstSFI	CTRYAG	3 cut(s)	1523, 1749, 1827
BstUI	CGCG	1 cut(s)	147
BstV1I	GCAGC	7 cut(s)	160, 658, 773, 922, 925, 1612, 1820
BstX2I	RGATCY	2 cut(s)	1465, 1869
BstXI	CCANNNNNNTGG	1 cut(s)	1158
BstYI	RGATCY	2 cut(s)	1465, 1869
BsuRI	GGCC	3 cut(s)	1147, 1162, 1476
BtgI	CCRYGG	3 cut(s)	70, 663, 882
BtsCI	GGATG	4 cut(s)	1416, 1449, 1666, 1833
BtsI	GCAGTG	3 cut(s)	351, 454, 1348
BtsIMutI	CAGTG	8 cut(s)	351, 454, 846, 1016, 1190, 1348, 1737, 1786
Cac8I	GCNNGC	2 cut(s)	143, 149
CfoI	GCGC	3 cut(s)	147, 1595, 1605
Cfr13I	GGNCC	3 cut(s)	52, 1146, 1795
CseI	GACGC	2 cut(s)	690, 1844
Csp6I	GTAC	2 cut(s)	357, 476
CviAII	CATG	9 cut(s)	71, 257, 633, 664, 883, 1102, 1158, 1242, 1792
CviQI	GTAC	2 cut(s)	357, 476
DdeI	CTNAG	3 cut(s)	56, 765, 1409
DpnI	GATC	4 cut(s)	78, 1467, 1871, 1901
DpnII	GATC	4 cut(s)	76, 1465, 1869, 1899
DraI	TTTAAA	1 cut(s)	802
Eam1104I	CTCTTC	3 cut(s)	498, 1618, 1707
EarI	CTCTTC	3 cut(s)	498, 1618, 1707
Eco130I	CCWWGG	6 cut(s)	70, 663, 882, 963, 1618, 1890
Eco147I	AGGCCT	1 cut(s)	1476
Eco24I	GRGCYC	1 cut(s)	1507
Eco31I	GGTCTC	1 cut(s)	506
Eco47I	GGWCC	2 cut(s)	52, 1795
Eco57I	CTGAAG	2 cut(s)	899, 1214
EcoO109I	RGGNCCY	2 cut(s)	52, 1146
EcoRI	GAATTC	1 cut(s)	1647
EcoRII	CCWGG	2 cut(s)	478, 979
EcoT14I	CCWWGG	6 cut(s)	70, 663, 882, 963, 1618, 1890
EcoT38I	GRGCYC	1 cut(s)	1507
ErhI	CCWWGG	6 cut(s)	70, 663, 882, 963, 1618, 1890
FaeI	CATG	9 cut(s)	74, 260, 636, 667, 886, 1105, 1161, 1245, 1795
FaqI	GGGAC	1 cut(s)	1273
FatI	CATG	9 cut(s)	70, 256, 632, 663, 882, 1101, 1157, 1241, 1791
FauI	CCCGC	1 cut(s)	1889
FblI	GTMKAC	1 cut(s)	810
Fnu4HI	GCNGC	7 cut(s)	174, 672, 762, 936, 939, 1601, 1809
FokI	GGATG	4 cut(s)	1403, 1436, 1673, 1820
FriOI	GRGCYC	1 cut(s)	1507
Fsp4HI	GCNGC	7 cut(s)	174, 672, 762, 936, 939, 1601, 1809
FspBI	CTAG	8 cut(s)	200, 698, 839, 1223, 1263, 1508, 1556, 1652
GlaI	GCGC	3 cut(s)	146, 1594, 1604
GluI	GCNGC	7 cut(s)	174, 672, 762, 936, 939, 1601, 1809
GsuI	CTGGAG	2 cut(s)	963, 1107
HaeII	RGCGCY	2 cut(s)	1596, 1606
HaeIII	GGCC	3 cut(s)	1147, 1162, 1476
HapII	CCGG	4 cut(s)	410, 1023, 1596, 1844
HgaI	GACGC	2 cut(s)	690, 1844
HhaI	GCGC	3 cut(s)	147, 1595, 1605
Hin1II	CATG	9 cut(s)	74, 260, 636, 667, 886, 1105, 1161, 1245, 1795
Hin6I	GCGC	3 cut(s)	145, 1593, 1603
HinP1I	GCGC	3 cut(s)	145, 1593, 1603
HincII	GTYRAC	1 cut(s)	844
HindII	GTYRAC	1 cut(s)	844
HindIII	AAGCTT	1 cut(s)	33
HpaII	CCGG	4 cut(s)	410, 1023, 1596, 1844
HphI	GGTGA	3 cut(s)	86, 326, 1104
Hpy166II	GTNNAC	3 cut(s)	786, 811, 844
Hpy188I	TCNGA	8 cut(s)	426, 532, 687, 779, 918, 1454, 1486, 1930
Hpy8I	GTNNAC	3 cut(s)	786, 811, 844
HpyAV	CCTTC	7 cut(s)	385, 446, 463, 571, 1250, 1275, 1571
HpyCH4III	ACNGT	8 cut(s)	193, 1098, 1208, 1534, 1741, 1750, 1771, 1781
HpyCH4IV	ACGT	1 cut(s)	1818
HpyF10VI	GCNNNNNNNGC	5 cut(s)	179, 308, 659, 668, 991
HpyF3I	CTNAG	3 cut(s)	56, 765, 1409
HpySE526I	ACGT	1 cut(s)	1818
Hsp92II	CATG	9 cut(s)	74, 260, 636, 667, 886, 1105, 1161, 1245, 1795
HspAI	GCGC	3 cut(s)	145, 1593, 1603
Kpn2I	TCCGGA	1 cut(s)	409
Kzo9I	GATC	4 cut(s)	76, 1465, 1869, 1899
LmnI	GCTCC	6 cut(s)	380, 748, 982, 1025, 1222, 1590
Lsp1109I	GCAGC	7 cut(s)	160, 658, 773, 922, 925, 1612, 1820
LweI	GCATC	6 cut(s)	331, 511, 841, 1458, 1684, 1795
MaeI	CTAG	8 cut(s)	200, 698, 839, 1223, 1263, 1508, 1556, 1652
MaeII	ACGT	1 cut(s)	1818
MaeIII	GTNAC	5 cut(s)	202, 346, 628, 1039, 1781
MalI	GATC	4 cut(s)	78, 1467, 1871, 1901
MbiI	CCGCTC	1 cut(s)	114
MboI	GATC	4 cut(s)	76, 1465, 1869, 1899
MboII	GAAGA	8 cut(s)	19, 407, 452, 509, 512, 515, 1635, 1694
MfeI	CAATTG	2 cut(s)	609, 1128
MflI	RGATCY	2 cut(s)	1465, 1869
MhlI	GDGCHC	2 cut(s)	1030, 1507
MlyI	GAGTC	4 cut(s)	199, 425, 1036, 1676
MmeI	TCCRAC	2 cut(s)	1509, 1790
MroI	TCCGGA	1 cut(s)	409
MroXI	GAANNNNTTC	1 cut(s)	912
MseI	TTAA	8 cut(s)	105, 327, 429, 536, 801, 893, 1199, 1397
MslI	CAYNNNNRTG	4 cut(s)	339, 596, 873, 1156
MspA1I	CMGCKG	2 cut(s)	141, 764
MspI	CCGG	4 cut(s)	410, 1023, 1596, 1844
MspR9I	CCNGG	3 cut(s)	480, 981, 1597
MunI	CAATTG	2 cut(s)	609, 1128
Mva1269I	GAATGC	2 cut(s)	383, 1739
MvaI	CCWGG	2 cut(s)	480, 981
MvnI	CGCG	1 cut(s)	147
MwoI	GCNNNNNNNGC	5 cut(s)	179, 308, 659, 668, 991
NciI	CCSGG	1 cut(s)	1597
NcoI	CCATGG	3 cut(s)	70, 663, 882
NdeII	GATC	4 cut(s)	76, 1465, 1869, 1899
NlaIII	CATG	9 cut(s)	74, 260, 636, 667, 886, 1105, 1161, 1245, 1795
NlaIV	GGNNCC	4 cut(s)	1148, 1467, 1871, 1888
NmuCI	GTSAC	5 cut(s)	202, 346, 628, 1039, 1781
NspI	RCATGY	1 cut(s)	1245
PceI	AGGCCT	1 cut(s)	1476
PctI	GAATGC	2 cut(s)	383, 1739
PdmI	GAANNNNTTC	1 cut(s)	912
PfeI	GAWTC	7 cut(s)	135, 272, 289, 723, 1559, 1710, 1925
PflFI	GACNNNGTC	1 cut(s)	1787
PflMI	CCANNNNNTGG	2 cut(s)	888, 1343
PkrI	GCNGC	7 cut(s)	175, 673, 763, 937, 940, 1602, 1810
PleI	GAGTC	4 cut(s)	199, 424, 1036, 1676
PpsI	GAGTC	4 cut(s)	199, 424, 1036, 1676
PpuMI	RGGWCCY	1 cut(s)	52
Psp5II	RGGWCCY	1 cut(s)	52
Psp6I	CCWGG	2 cut(s)	478, 979
PspGI	CCWGG	2 cut(s)	478, 979
PspN4I	GGNNCC	4 cut(s)	1148, 1467, 1871, 1888
PspPI	GGNCC	3 cut(s)	52, 1146, 1795
PspPPI	RGGWCCY	1 cut(s)	52
PsuI	RGATCY	2 cut(s)	1465, 1869
PsyI	GACNNNGTC	1 cut(s)	1787
PvuII	CAGCTG	1 cut(s)	764
RsaI	GTAC	2 cut(s)	358, 477
RsaNI	GTAC	2 cut(s)	357, 476
RseI	CAYNNNNRTG	4 cut(s)	339, 596, 873, 1156
SaqAI	TTAA	8 cut(s)	105, 327, 429, 536, 801, 893, 1199, 1397
SatI	GCNGC	7 cut(s)	174, 672, 762, 936, 939, 1601, 1809
Sau3AI	GATC	4 cut(s)	76, 1465, 1869, 1899
Sau96I	GGNCC	3 cut(s)	52, 1146, 1795
SchI	GAGTC	4 cut(s)	199, 425, 1036, 1676
ScrFI	CCNGG	3 cut(s)	480, 981, 1597
SduI	GDGCHC	2 cut(s)	1030, 1507
SfaNI	GCATC	6 cut(s)	331, 511, 841, 1458, 1684, 1795
SfcI	CTRYAG	3 cut(s)	1523, 1749, 1827
SinI	GGWCC	2 cut(s)	52, 1795
SmiMI	CAYNNNNRTG	4 cut(s)	339, 596, 873, 1156
SmlI	CTYRAG	4 cut(s)	109, 1229, 1422, 1634
SmoI	CTYRAG	4 cut(s)	109, 1229, 1422, 1634
SpeI	ACTAGT	1 cut(s)	1222
SseBI	AGGCCT	1 cut(s)	1476
SsiI	CCGC	5 cut(s)	114, 139, 300, 1884, 1896
SspI	AATATT	1 cut(s)	1035
SspMI	CTAG	8 cut(s)	200, 698, 839, 1223, 1263, 1508, 1556, 1652
StuI	AGGCCT	1 cut(s)	1476
StyD4I	CCNGG	3 cut(s)	478, 979, 1595
StyI	CCWWGG	6 cut(s)	70, 663, 882, 963, 1618, 1890
TaaI	ACNGT	8 cut(s)	193, 1098, 1208, 1534, 1741, 1750, 1771, 1781
TaiI	ACGT	1 cut(s)	1821
TaqI	TCGA	5 cut(s)	234, 1045, 1064, 1680, 1863
TaqII	GACCGA	1 cut(s)	530
TfiI	GAWTC	7 cut(s)	135, 272, 289, 723, 1559, 1710, 1925
Tru1I	TTAA	8 cut(s)	105, 327, 429, 536, 801, 893, 1199, 1397
Tru9I	TTAA	8 cut(s)	105, 327, 429, 536, 801, 893, 1199, 1397
TscAI	CASTG	8 cut(s)	351, 454, 853, 1023, 1197, 1348, 1744, 1786
TseFI	GTSAC	5 cut(s)	202, 346, 628, 1039, 1781
TseI	GCWGC	7 cut(s)	173, 671, 761, 935, 938, 1600, 1808
Tsp45I	GTSAC	5 cut(s)	202, 346, 628, 1039, 1781
TspGWI	ACGGA	1 cut(s)	1377
TspRI	CASTG	8 cut(s)	351, 454, 853, 1023, 1197, 1348, 1744, 1786
Tth111I	GACNNNGTC	1 cut(s)	1787
Van91I	CCANNNNNTGG	2 cut(s)	888, 1343
VpaK11BI	GGWCC	2 cut(s)	52, 1795
XapI	RAATTY	4 cut(s)	218, 919, 1647, 1724
XbaI	TCTAGA	1 cut(s)	1507
XceI	RCATGY	1 cut(s)	1245
XcmI	CCANNNNNNNNNTGG	1 cut(s)	661
XmiI	GTMKAC	1 cut(s)	810
XmnI	GAANNNNTTC	1 cut(s)	912
XspI	CTAG	8 cut(s)	200, 698, 839, 1223, 1263, 1508, 1556, 1652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.