RLG00000028992

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
31160926 .. 31168863
7938 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028992

Sequence Viewer

Length: 4491 bp
ATGAATTTCCGGCTTGAATTTCAGACAGAATGGCTCCAGCAAAACTTTCCCTGCTTGTATGTGCACATCAGCATAGTTATGCAACTCAGTTTCCTTGGCATCTTAGTACTGCATTTTTTACAAAAAATCATGGGTCAAATATGCAAACAAAGAACTACATTCACAGACCAAAGCACGGAGAACAATGGCACTGGCATTGGCGCGCAATTCAGCACCCTTTACAAGACAACAATAGCTTGTTGCCTTTTACTGATGGGAACTCATTTCATAGTGGTGCTGTTGCTGGTAAATGGAAGTTTTACATACTGCAATCATAAAGTTCCCATATTTTCATCAGAGGGCATGCAAGTGGTATCATGGGCACTATCATCAGTTGCAGTATACCGGCTTGTGAATATCAAGTCCATCAAGTTCCCTTGGCTATTAAGAGCATGGTGGCTTTGCAGCTTCATCTTGTCCATCATCTCTGTGGCTGTTGATACATATTTCCAAATCACATACCATGGCCAGCTTCGATTACAAGATTATTCTGACATCCTGAGTCTCCTTGCATCCACCTGCCTGTTTGCTATTTCAATACAAGGGAAGACAGGACTAACCTTCACCGTCCCAGATAGCATCACCGAACCACTTCTCAGTGGAAAAGGTGATAAACATACAGAAGGAAGACAACAATCTCCATATGGAAAAGCTACTCTTCTCCAACTCATCACATTCTCTTGGCTCAACCCCTTGTTTTCTCTTGGAATCAAGAAACCCCTAGACCAGGAAGAAGTCCCAGCTCTTGACATCAAAGACTCAGCTGAATATCTGTCTCACTCATATGATGAGAGACTAAAACATGTTAAGGAGAGAGATGGAACCACAAACCCAGATATCTACAAGACAATTTATTTGTTTATCAGGAAGAAAGCAGCAATCAATGCTATGTTTGCTGCAACATATGCTGTAGCATCATATGTTGGACCATATCTCATTAATGACTTTGTAAACTTTTTGACAGAGAAGAAAACTCGAAGCTCAGGGAGTGGCTACATTCTTGCAGTTGCCTTTCTAGGAGCCAAGATGGTTGAAACGATTGCACAGAGGCAATGGATATTTGGGGCAAGACAGCTAGGCCTTCGCCTTAGAGCTGCTCTGATATCTCAAATTTTCAAGAAAGGCTTACATCTATCAAGCCAATCCCACCAAAGCCACAACAGTGGAGAGGTCATCAACTATATGAGTGTAGATATCCAAAGAATCACAGACTTCGTTTGGTACTTAAACATAATATGGATGATGCCTATTCAAATTTCCTTGGCAATCTATATCCTTCATACGAATCTAGGCATGGGTTCCTTTGGCGCATTAGTAGCAACTTTTGGAGTACTGCTTTGCAATATCCCAATGACTAATCTTCAGAAAAGATACCAGTCTAGGATCATGGAAGCCAAGGACAACAGGATGAAAGCCACTACAGAGATTCTTCGAAGCATGAAGACCATCAAACTTCAGGCATGGGACAGTCAGTTCCTTCACAAGTTAGAAAGCTTGAGGAAAATAGAGTACGACTGGCTATGGAAGTCACTAAGACTGTTTGCAATTGGCTCTACTGTCTTTTGGGGAGCACCCTCATTTATCTCAGTGGTGACTTTCTGGGCTTGTATGCTGATGGGTATAGACCTCACAGCAGGGAGAGTTTTATCAGCATTAGCCACCTTCAGAATGTTACAAGATCCTATATTTAATCTACCTGATGTCCTCAACGTGATTGCACAGGGAAAAGTTTCCGCAGATAGAGTAGCTTCATATCTCATGGAAGAAGAAATTCAGCAGGATTCCATTGAGCATATTCCAAAAGATCAGATGGAAAACTCCATTGAAATAGAAAATGGAAAATTTGGCTGGAATAGTGAGTCAAGCAGCACAACACTGGATGGAATCCACTTAAAAGTGAAGAGGGGTATGAAAGTGGCAATTTGTGGGACTGTAGGATCAGGGAAGTCTAGCCTTCTGTCATGCATACTTGGAGAAATTCAAAAGTTGTCAGGGACAGTGAAAATCAGCGGTACAAAGGCTTATGTTCCTCAATCTCCATGGATTTTGACAGGAAATATCAGGGAGAATATCCTGTTTGGAAATGCATTCGATAAGGCCAAGTATGACAAAACCGTTAAAGCATGTGCATTGGAAAAGGATCTTGAGCTATTCTCCTCTGGAGATCTAACAGAAATAGGAGAAAGAGGAATTAATATGAGCGGAGGACAGAAACAAAGGATACAAATTGCTCGTGCAGTTTACCAGGATGCTGATATATATCTACTAGATGACCCTTTCAGTGCTGTTGATGCTCACACAGGAACGCAACTCTTTGAGGACTGCATGATGGGAATTCTCAAAGAGAAGACTACACTTTATGTCACCCACCAAGTTGAGTTTCTCCCAGCAGCCGACTTGATTCTGGTGATGCAAGATGGAAAAATTGCACAAGCTGGAAGCTTTGAAGAGCTTCTAAAACAAAATATAGGCTTTGAAGTTTTGGTTGGTGCTCATAGCCGAGCTCTAGAGTCAATCCTAACAGTTGAAAATAACAGCAGAACTACTCAAACTCCAACATCTGACAATGAATCCTCTACAGATTCCACATCAAATGCTAAACTTCCACAGACACGACAGAAATCAGAACATAATCTCTCTATAGAGATTACTGAAAAAGAAGGAAAATTGGTTCAAGATGAAGAGAGAGAGAAAGGAGGCATTGGAAAAGAAGTTTACTGGTCTTATTTGACTACTGTGAAAGCTGGTATGCTAGTTCCAATCATAATCTTGGCACAGTCATCATTCCAAGTACTGCAGGTAGCTAGTAACTATTGGATGGCATGGGCTTCACCTCCTACAATTGAGACGGAGCCAAAATTTGGGATTAAGTTCATATTACTTACTTATATACTACTCGCTATTGGAAGTTCACTTTGTGTGCTATTGCGAGCATCACTAATAGCAGTAGCAGGACTTGCAACAGCACAAAAGTTCTTCACAAATATGCTACATAGCATACTCCGAGCACCAATGGCATTTTTTGATTCAACCCCAACTGGAAGAATCTTAAACCGAGCATCTACTGATCAAAGTGTGTTAGATTTGGAAATGGCAATCAAATTAGGTTGGTGCGCTTTCTCTATAATACAGATTTTAGGGACCATTGCAGTGATGTCACAAGTAGCATGGGAAGTATTCATCGTATTCATTCCGGTAACTGCAGTCTGCATATGGTATCAGCAATATTACATACCAACAGCAAGAGAACTGGCGCGGCTATCAGGCATACAAAGGGCTCCGATCCTCCATCACTTTGCAGAATCTCTGGCAGGAGCAGCAACAATCCGTGCTTTTGATCAACAGGACCGCTTTAGTAATGCAAACCTCAGTCTTATTGACAACCACTCAAGGCCATGGTTTCATAATGTGTCAGCAATGGAATGGCTTTCTTTCAGACTAAATCTACTCTCAAACTTTGTGTTTGGCTTCTCATTAGTTCTATTGGTGACTCTACCTGAAGGAGTTATTAATCCAAGCATTGCAGGGTTGGCGGTAACATATGGAATAAATCTGAATGTTTTGCAAGCTTCAATTATATGGAACATATGCAATGCAGAAAATAAGATGATCTCAGTTGAAAGAATTCTGCAGTACTCAAATCTAACAAGTGAAGCACCTCTTGTAATTGAAGAATGCAAGCCACCAATCAACTGGCCACAAGTTGGAACAATTTGTTTCAAAAATCTGCAGATTCGTTATGCTGAACATCTCCCATCTGTTCTGAAAAACATTAACTGTACATTTCCGGGAAAAAACAAAGTTGGTGTTGTAGGAAGGACAGGAAGTGGGAAATCAACCCTCATACAGGCTCTTTTCAGGATAGTTGAACCTAGAGAAGGAAGCATTTTAATTGATGATCTAGACATTTGCAAAATTGGCCTTCATGACTTAAGATCAAGACTCAGCATCATTCCACAAGAACCAACAATGTTTGAAGGAACAGTTAGAGGAAACCTCGACCCACTATGGCAATACTCTGACAGTGATGTTTGGGAGGCTTTAGATAAATGTCAGCTAGGTGATCTAGTGCGTGCAAAGGAAGAGAAATTGGAAGCCTCAGTGACGGAAAATGGAGAAAACTGGAGTGCGGGTCAAAGACAGTTACTTTGCCTTGGAAGAGCATTGCTAAAGAAAAGCAGAATTCTGGTATTGGATGAAGCAACAGCATCAGTTGATTCTGCAACTGATGGGGTGATACAGAAGATCATCAGCCAAGAATTCAAAGACCGAACAGTTGTCACAGTAGCTCATAGAATCCACACAGTTATAGACAGTGATCTCGTTTTGGTCCTCAGTGACGGAAGGATTGCAGAATACGACACACCAGCAAAGCTACTAGAGAGAGAAGATTCTTTGTTTTCTAAACTCATAAAGGAGTACTCAATGAGATCCCAGAGCCTCAACAGGTGA

Protein Analysis

1497

Amino Acids

167.3

Weight (kDa)

7.13

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 310 - 574 2.2e-29 ABC transporter transmembrane region
ABC_tran PF00005 639 - 773 1.5e-20 ABC transporter
ABC_membrane PF00664 952 - 1178 5.4e-32 ABC transporter transmembrane region
ABC_tran PF00005 1268 - 1416 7.5e-26 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 566
Acc36I ACCTGC 2 cut(s) 566, 2827
AccB7I CCANNNNNTGG 2 cut(s) 2900, 3743
AccBSI CCGCTC 1 cut(s) 2241
AccI GTMKAC 1 cut(s) 381
AccII CGCG 2 cut(s) 203, 3295
AciI CCGC 7 cut(s) 1773, 2049, 2241, 3295, 3388, 3572, 4169
AclWI GGATC 6 cut(s) 1430, 1712, 1984, 2187, 3316, 4464
AcoI YGGCCR 2 cut(s) 505, 3734
AcuI CTGAAG 4 cut(s) 1385, 1478, 1687, 3558
AdeI CACNNNGTG 1 cut(s) 2957
AfaI GTAC 9 cut(s) 108, 1262, 1371, 1550, 2053, 2832, 3674, 3820, 4460
AfiI CCNNNNNNNGG 6 cut(s) 175, 766, 2900, 3743, 3886, 3917
AflII CTTAAG 1 cut(s) 3970
AflIII ACRYGT 1 cut(s) 841
AjnI CCWGG 2 cut(s) 765, 2283
AjuI GAANNNNNNNTTGG 4 cut(s) 2403, 2435, 2508, 2540
AleI CACNNNNGTG 1 cut(s) 1200
AloI GAACNNNNNNTCC 4 cut(s) 1496, 1528, 2694, 2726
Alw21I GWGCWC 5 cut(s) 66, 1612, 2533, 2545, 3049
Alw26I GTCTC 4 cut(s) 548, 819, 826, 2879
Alw44I GTGCAC 1 cut(s) 62
AlwI GGATC 6 cut(s) 1430, 1712, 1984, 2187, 3316, 4464
AoxI GGCC 6 cut(s) 505, 1117, 2136, 3431, 3734, 3958
ApaLI GTGCAC 1 cut(s) 62
ApeKI GCWGC 7 cut(s) 444, 914, 935, 1133, 1905, 2429, 3356
ArsI GACNNNNNNTTYG 4 cut(s) 877, 909, 4170, 4202
AseI ATTAAT 3 cut(s) 978, 2232, 3549
Asp700I GAANNNNTTC 5 cut(s) 630, 1768, 1809, 2490, 3663
AspLEI GCGC 5 cut(s) 203, 205, 1349, 3155, 3295
AspS9I GGNCC 4 cut(s) 965, 3180, 3385, 4369
AsuC2I CCSGG 1 cut(s) 3828
AsuII TTCGAA 1 cut(s) 1471
AvaII GGWCC 4 cut(s) 965, 3180, 3385, 4369
BaeGI GKGCMC 2 cut(s) 66, 364
BalI TGGCCA 2 cut(s) 507, 3736
BanII GRGCYC 2 cut(s) 2545, 3319
BauI CACGAG 1 cut(s) 2271
BbsI GAAGAC 4 cut(s) 593, 673, 1487, 2393
Bbv12I GWGCWC 5 cut(s) 66, 1612, 2533, 2545, 3049
BbvI GCAGC 7 cut(s) 456, 922, 926, 1120, 1917, 2441, 3368
BciT130I CCWGG 2 cut(s) 767, 2285
BciVI GTATCC 1 cut(s) 2253
BclI TGATCA 2 cut(s) 3106, 3376
BcnI CCSGG 1 cut(s) 3828
BcoDI GTCTC 4 cut(s) 548, 819, 826, 2879
BfmI CTRYAG 9 cut(s) 948, 1458, 1971, 2616, 2679, 2834, 3240, 3668, 3767
BfrI CTTAAG 1 cut(s) 3970
BfuAI ACCTGC 2 cut(s) 566, 2827
BfuI GTATCC 1 cut(s) 2253
BglII AGATCT 1 cut(s) 2203
BisI GCNGC 8 cut(s) 445, 915, 936, 1134, 1906, 2430, 3296, 3357
BlsI GCNGC 8 cut(s) 446, 916, 937, 1135, 1907, 2431, 3297, 3358
BmcAI AGTACT 5 cut(s) 108, 1371, 2832, 3674, 4460
Bme1390I CCNGG 3 cut(s) 767, 2285, 3828
Bme18I GGWCC 4 cut(s) 965, 3180, 3385, 4369
BmgT120I GGNCC 4 cut(s) 965, 3180, 3385, 4369
BmiI GGNNCC 7 cut(s) 35, 862, 1060, 1339, 2892, 3181, 3318
BmrFI CCNGG 3 cut(s) 767, 2285, 3828
BpiI GAAGAC 4 cut(s) 593, 673, 1487, 2393
BplI GAGNNNNNCTC 4 cut(s) 2177, 2209, 4020, 4052
BpmI CTGGAG 3 cut(s) 20, 2220, 4183
Bpu10I CCTNAGC 1 cut(s) 1021
Bpu14I TTCGAA 1 cut(s) 1471
BpuEI CTTGAG 3 cut(s) 1555, 2204, 3412
BpuMI CCSGG 1 cut(s) 3828
BsaBI GATNNNNATC 1 cut(s) 2298
BsaJI CCNNGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
BsaWI WCCGGW 1 cut(s) 3232
BsaXI ACNNNNNCTCC 4 cut(s) 2575, 2605, 4156, 4186
Bsc4I CCNNNNNNNGG 6 cut(s) 175, 766, 2900, 3743, 3886, 3917
Bse118I RCCGGY 1 cut(s) 384
Bse1I ACTGG 9 cut(s) 196, 1414, 1559, 1920, 2762, 3082, 3294, 3737, 4166
Bse3DI GCAATG 6 cut(s) 1097, 3183, 3462, 3558, 3637, 4202
Bse8I GATNNNNATC 1 cut(s) 2298
BseBI CCWGG 2 cut(s) 767, 2285
BseDI CCNNGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
BseGI GGATG 8 cut(s) 534, 551, 1284, 1452, 1924, 2293, 2862, 4240
BseJI GATNNNNATC 1 cut(s) 2298
BseLI CCNNNNNNNGG 6 cut(s) 175, 766, 2900, 3743, 3886, 3917
BseMI GCAATG 6 cut(s) 1097, 3183, 3462, 3558, 3637, 4202
BseNI ACTGG 9 cut(s) 196, 1414, 1559, 1920, 2762, 3082, 3294, 3737, 4166
BsePI GCGCGC 1 cut(s) 201
BseRI GAGGAG 1 cut(s) 2185
BseSI GKGCMC 2 cut(s) 66, 364
BseXI GCAGC 7 cut(s) 456, 922, 926, 1120, 1917, 2441, 3368
BseYI CCCAGC 2 cut(s) 778, 2425
BsgI GTGCAG 1 cut(s) 2295
Bsh1236I CGCG 2 cut(s) 203, 3295
BshFI GGCC 6 cut(s) 507, 1119, 2138, 3433, 3736, 3960
BsiHKAI GWGCWC 5 cut(s) 66, 1612, 2533, 2545, 3049
BsiSI CCGG 4 cut(s) 10, 385, 3233, 3827
BslFI GGGAC 6 cut(s) 593, 761, 1517, 1981, 2047, 3193
BslI CCNNNNNNNGG 6 cut(s) 175, 766, 2900, 3743, 3886, 3917
BsmAI GTCTC 4 cut(s) 548, 819, 826, 2879
BsmBI CGTCTC 1 cut(s) 2879
BsmFI GGGAC 6 cut(s) 593, 761, 1517, 1981, 2047, 3193
BsmI GAATGC 2 cut(s) 2126, 3719
BsnI GGCC 6 cut(s) 507, 1119, 2138, 3433, 3736, 3960
Bsp119I TTCGAA 1 cut(s) 1471
Bsp1286I GDGCHC 7 cut(s) 66, 364, 1612, 2533, 2545, 3049, 3319
Bsp1407I TGTACA 1 cut(s) 3818
Bsp19I CCATGG 3 cut(s) 502, 2078, 3434
BspACI CCGC 7 cut(s) 1773, 2049, 2241, 3295, 3388, 3572, 4169
BspANI GGCC 6 cut(s) 507, 1119, 2138, 3433, 3736, 3960
BspFNI CGCG 2 cut(s) 203, 3295
BspHI TCATGA 1 cut(s) 3964
BspLI GGNNCC 7 cut(s) 35, 862, 1060, 1339, 2892, 3181, 3318
BspMAI CTGCAG 4 cut(s) 2838, 3244, 3672, 3771
BspMI ACCTGC 2 cut(s) 566, 2827
BspPI GGATC 6 cut(s) 1430, 1712, 1984, 2187, 3316, 4464
BspQI GCTCTTC 2 cut(s) 2481, 4192
BspT104I TTCGAA 1 cut(s) 1471
BspTI CTTAAG 1 cut(s) 3970
BsrBI CCGCTC 1 cut(s) 2241
BsrDI GCAATG 6 cut(s) 1097, 3183, 3462, 3558, 3637, 4202
BsrFI RCCGGY 1 cut(s) 384
BsrGI TGTACA 1 cut(s) 3818
BsrI ACTGG 9 cut(s) 196, 1414, 1559, 1920, 2762, 3082, 3294, 3737, 4166
BssAI RCCGGY 1 cut(s) 384
BssECI CCNNGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
BssHII GCGCGC 1 cut(s) 201
BssNAI GTATAC 1 cut(s) 382
BssSI CACGAG 1 cut(s) 2271
BssT1I CCWWGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
Bst1107I GTATAC 1 cut(s) 382
Bst2BI CACGAG 1 cut(s) 2271
Bst2UI CCWGG 2 cut(s) 767, 2285
Bst6I CTCTTC 6 cut(s) 702, 1934, 2481, 2715, 4116, 4192
BstAFI CTTAAG 1 cut(s) 3970
BstAPI GCANNNNNTGC 3 cut(s) 923, 944, 2996
BstAUI TGTACA 1 cut(s) 3818
BstBI TTCGAA 1 cut(s) 1471
BstC8I GCNNGC 7 cut(s) 203, 344, 509, 2970, 3606, 3719, 4113
BstDSI CCRYGG 3 cut(s) 502, 2078, 3434
BstENI CCTNNNNNAGG 3 cut(s) 764, 3884, 3915
BstF5I GGATG 8 cut(s) 534, 551, 1284, 1452, 1924, 2293, 2862, 4240
BstFNI CGCG 2 cut(s) 203, 3295
BstHHI GCGC 5 cut(s) 203, 205, 1349, 3155, 3295
BstMAI GTCTC 4 cut(s) 548, 819, 826, 2879
BstNI CCWGG 2 cut(s) 767, 2285
BstNSI RCATGY 3 cut(s) 346, 845, 2166
BstSCI CCNGG 3 cut(s) 765, 2283, 3826
BstSFI CTRYAG 9 cut(s) 948, 1458, 1971, 2616, 2679, 2834, 3240, 3668, 3767
BstSLI GKGCMC 2 cut(s) 66, 364
BstUI CGCG 2 cut(s) 203, 3295
BstV1I GCAGC 7 cut(s) 456, 922, 926, 1120, 1917, 2441, 3368
BstV2I GAAGAC 4 cut(s) 593, 673, 1487, 2393
BstX2I RGATCY 4 cut(s) 1717, 2179, 2203, 4469
BstXI CCANNNNNNTGG 2 cut(s) 1202, 3732
BstYI RGATCY 4 cut(s) 1717, 2179, 2203, 4469
BstZ17I GTATAC 1 cut(s) 382
BsuI GTATCC 1 cut(s) 2253
BsuRI GGCC 6 cut(s) 507, 1119, 2138, 3433, 3736, 3960
BtgI CCRYGG 3 cut(s) 502, 2078, 3434
BtsCI GGATG 8 cut(s) 534, 551, 1284, 1452, 1924, 2293, 2862, 4240
BtsI GCAGTG 1 cut(s) 3195
BveI ACCTGC 2 cut(s) 566, 2827
Cac8I GCNNGC 7 cut(s) 203, 344, 509, 2970, 3606, 3719, 4113
CciI TCATGA 1 cut(s) 3964
CfoI GCGC 5 cut(s) 203, 205, 1349, 3155, 3295
Cfr10I RCCGGY 1 cut(s) 384
Cfr13I GGNCC 4 cut(s) 965, 3180, 3385, 4369
Csp6I GTAC 9 cut(s) 107, 1261, 1370, 1549, 2052, 2831, 3673, 3819, 4459
CviQI GTAC 9 cut(s) 107, 1261, 1370, 1549, 2052, 2831, 3673, 3819, 4459
DraIII CACNNNGTG 1 cut(s) 2957
EaeI YGGCCR 2 cut(s) 505, 3734
Eam1104I CTCTTC 6 cut(s) 702, 1934, 2481, 2715, 4116, 4192
EarI CTCTTC 6 cut(s) 702, 1934, 2481, 2715, 4116, 4192
Ecl136II GAGCTC 1 cut(s) 2543
Eco130I CCWWGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
Eco147I AGGCCT 1 cut(s) 1119
Eco24I GRGCYC 2 cut(s) 2545, 3319
Eco32I GATATC 3 cut(s) 877, 1143, 1234
Eco47I GGWCC 4 cut(s) 965, 3180, 3385, 4369
Eco53kI GAGCTC 1 cut(s) 2543
Eco57I CTGAAG 4 cut(s) 1385, 1478, 1687, 3558
EcoICRI GAGCTC 1 cut(s) 2543
EcoNI CCTNNNNNAGG 3 cut(s) 764, 3884, 3915
EcoRI GAATTC 4 cut(s) 2373, 3663, 4221, 4298
EcoRII CCWGG 2 cut(s) 765, 2283
EcoRV GATATC 3 cut(s) 877, 1143, 1234
EcoT14I CCWWGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
EcoT22I ATGCAT 2 cut(s) 2006, 2128
EcoT38I GRGCYC 2 cut(s) 2545, 3319
ErhI CCWWGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
Esp3I CGTCTC 1 cut(s) 2879
FalI AAGNNNNNCTT 6 cut(s) 681, 713, 1148, 1180, 3684, 3716
FaqI GGGAC 6 cut(s) 593, 761, 1517, 1981, 2047, 3193
FauI CCCGC 1 cut(s) 4162
FauNDI CATATG 7 cut(s) 682, 823, 943, 958, 3251, 3580, 3626
FbaI TGATCA 2 cut(s) 3106, 3376
FblI GTMKAC 1 cut(s) 381
Fnu4HI GCNGC 8 cut(s) 445, 915, 936, 1134, 1906, 2430, 3296, 3357
FokI GGATG 8 cut(s) 521, 538, 1291, 1459, 1931, 2300, 2869, 4247
FriOI GRGCYC 2 cut(s) 2545, 3319
Fsp4HI GCNGC 8 cut(s) 445, 915, 936, 1134, 1906, 2430, 3296, 3357
GlaI GCGC 5 cut(s) 202, 204, 1348, 3154, 3294
GluI GCNGC 8 cut(s) 445, 915, 936, 1134, 1906, 2430, 3296, 3357
GsaI CCCAGC 2 cut(s) 782, 2429
GsuI CTGGAG 3 cut(s) 20, 2220, 4183
HaeIII GGCC 6 cut(s) 507, 1119, 2138, 3433, 3736, 3960
HapII CCGG 4 cut(s) 10, 385, 3233, 3827
HhaI GCGC 5 cut(s) 203, 205, 1349, 3155, 3295
Hin6I GCGC 5 cut(s) 201, 203, 1347, 3153, 3293
HinP1I GCGC 5 cut(s) 201, 203, 1347, 3153, 3293
HindIII AAGCTT 3 cut(s) 1531, 2479, 3606
HpaII CCGG 4 cut(s) 10, 385, 3233, 3827
Hpy166II GTNNAC 6 cut(s) 64, 382, 991, 2281, 2755, 2951
Hpy8I GTNNAC 6 cut(s) 64, 382, 991, 2281, 2755, 2951
HpyCH4IV ACGT 1 cut(s) 1749
HpySE526I ACGT 1 cut(s) 1749
HspAI GCGC 5 cut(s) 201, 203, 1347, 3153, 3293
Ksp22I TGATCA 2 cut(s) 3106, 3376
LguI GCTCTTC 2 cut(s) 2481, 4192
LmnI GCTCC 6 cut(s) 39, 1058, 1607, 2890, 3322, 3353
Lsp1109I GCAGC 7 cut(s) 456, 922, 926, 1120, 1917, 2441, 3368
MaeII ACGT 1 cut(s) 1749
MbiI CCGCTC 1 cut(s) 2241
MfeI CAATTG 2 cut(s) 1584, 2880
MflI RGATCY 4 cut(s) 1717, 2179, 2203, 4469
MhlI GDGCHC 7 cut(s) 66, 364, 1612, 2533, 2545, 3049, 3319
MlsI TGGCCA 2 cut(s) 507, 3736
MluNI TGGCCA 2 cut(s) 507, 3736
MlyI GAGTC 6 cut(s) 550, 791, 1907, 2558, 3523, 3975
MmeI TCCRAC 4 cut(s) 727, 943, 2618, 3724
Mox20I TGGCCA 2 cut(s) 507, 3736
Mph1103I ATGCAT 2 cut(s) 2006, 2128
MroXI GAANNNNTTC 5 cut(s) 630, 1768, 1809, 2490, 3663
MscI TGGCCA 2 cut(s) 507, 3736
MslI CAYNNNNRTG 8 cut(s) 77, 272, 347, 467, 822, 1200, 3023, 3188
Msp20I TGGCCA 2 cut(s) 507, 3736
MspA1I CMGCKG 2 cut(s) 803, 2049
MspCI CTTAAG 1 cut(s) 3970
MspI CCGG 4 cut(s) 10, 385, 3233, 3827
MspR9I CCNGG 3 cut(s) 767, 2285, 3828
MunI CAATTG 2 cut(s) 1584, 2880
Mva1269I GAATGC 2 cut(s) 2126, 3719
MvaI CCWGG 2 cut(s) 767, 2285
MvnI CGCG 2 cut(s) 203, 3295
NciI CCSGG 1 cut(s) 3828
NcoI CCATGG 3 cut(s) 502, 2078, 3434
NdeI CATATG 7 cut(s) 682, 823, 943, 958, 3251, 3580, 3626
NlaIV GGNNCC 7 cut(s) 35, 862, 1060, 1339, 2892, 3181, 3318
NmeAIII GCCGAG 1 cut(s) 2564
NmuCI GTSAC 8 cut(s) 1566, 1630, 2401, 3195, 3526, 4141, 4318, 4376
NsiI ATGCAT 2 cut(s) 2006, 2128
NspI RCATGY 3 cut(s) 346, 845, 2166
NspV TTCGAA 1 cut(s) 1471
OliI CACNNNNGTG 1 cut(s) 1200
PaeI GCATGC 1 cut(s) 346
PagI TCATGA 1 cut(s) 3964
PaqCI CACCTGC 1 cut(s) 566
PauI GCGCGC 1 cut(s) 201
PceI AGGCCT 1 cut(s) 1119
PciI ACATGT 1 cut(s) 841
PciSI GCTCTTC 2 cut(s) 2481, 4192
PctI GAATGC 2 cut(s) 2126, 3719
PdmI GAANNNNTTC 5 cut(s) 630, 1768, 1809, 2490, 3663
PflMI CCANNNNNTGG 2 cut(s) 2900, 3743
PfoI TCCNGGA 1 cut(s) 3826
PkrI GCNGC 8 cut(s) 446, 916, 937, 1135, 1907, 2431, 3297, 3358
PleI GAGTC 6 cut(s) 549, 791, 1906, 2557, 3523, 3975
PpsI GAGTC 6 cut(s) 549, 791, 1906, 2557, 3523, 3975
PscI ACATGT 1 cut(s) 841
PshBI ATTAAT 3 cut(s) 978, 2232, 3549
Psp124BI GAGCTC 1 cut(s) 2545
Psp6I CCWGG 2 cut(s) 765, 2283
PspFI CCCAGC 2 cut(s) 778, 2425
PspGI CCWGG 2 cut(s) 765, 2283
PspN4I GGNNCC 7 cut(s) 35, 862, 1060, 1339, 2892, 3181, 3318
PspPI GGNCC 4 cut(s) 965, 3180, 3385, 4369
PstI CTGCAG 4 cut(s) 2838, 3244, 3672, 3771
PsuI RGATCY 4 cut(s) 1717, 2179, 2203, 4469
PteI GCGCGC 1 cut(s) 201
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 9 cut(s) 108, 1262, 1371, 1550, 2053, 2832, 3674, 3820, 4460
RsaNI GTAC 9 cut(s) 107, 1261, 1370, 1549, 2052, 2831, 3673, 3819, 4459
RseI CAYNNNNRTG 8 cut(s) 77, 272, 347, 467, 822, 1200, 3023, 3188
SacI GAGCTC 1 cut(s) 2545
SapI GCTCTTC 2 cut(s) 2481, 4192
SatI GCNGC 8 cut(s) 445, 915, 936, 1134, 1906, 2430, 3296, 3357
Sau96I GGNCC 4 cut(s) 965, 3180, 3385, 4369
ScaI AGTACT 5 cut(s) 108, 1371, 2832, 3674, 4460
SchI GAGTC 6 cut(s) 550, 791, 1907, 2558, 3523, 3975
ScrFI CCNGG 3 cut(s) 767, 2285, 3828
SduI GDGCHC 7 cut(s) 66, 364, 1612, 2533, 2545, 3049, 3319
SfcI CTRYAG 9 cut(s) 948, 1458, 1971, 2616, 2679, 2834, 3240, 3668, 3767
SfuI TTCGAA 1 cut(s) 1471
SinI GGWCC 4 cut(s) 965, 3180, 3385, 4369
SmiMI CAYNNNNRTG 8 cut(s) 77, 272, 347, 467, 822, 1200, 3023, 3188
SmlI CTYRAG 4 cut(s) 1534, 2183, 3427, 3970
SmoI CTYRAG 4 cut(s) 1534, 2183, 3427, 3970
SphI GCATGC 1 cut(s) 346
SseBI AGGCCT 1 cut(s) 1119
SsiI CCGC 7 cut(s) 1773, 2049, 2241, 3295, 3388, 3572, 4169
SspI AATATT 1 cut(s) 3266
SstI GAGCTC 1 cut(s) 2545
StuI AGGCCT 1 cut(s) 1119
StyD4I CCNGG 3 cut(s) 765, 2283, 3826
StyI CCWWGG 8 cut(s) 94, 416, 502, 1299, 1434, 2078, 3434, 4192
TaiI ACGT 1 cut(s) 1752
TaqI TCGA 5 cut(s) 514, 1015, 1471, 2130, 4038
TaqII GACCGA 1 cut(s) 4323
TatI WGTACW 6 cut(s) 106, 1369, 2830, 3672, 3818, 4458
TauI GCSGC 1 cut(s) 3298
TseFI GTSAC 8 cut(s) 1566, 1630, 2401, 3195, 3526, 4141, 4318, 4376
TseI GCWGC 7 cut(s) 444, 914, 935, 1133, 1905, 2429, 3356
Tsp45I GTSAC 8 cut(s) 1566, 1630, 2401, 3195, 3526, 4141, 4318, 4376
TspGWI ACGGA 5 cut(s) 191, 2903, 3356, 4160, 4395
Van91I CCANNNNNTGG 2 cut(s) 2900, 3743
Vha464I CTTAAG 1 cut(s) 3970
VneI GTGCAC 1 cut(s) 62
VpaK11BI GGWCC 4 cut(s) 965, 3180, 3385, 4369
VspI ATTAAT 3 cut(s) 978, 2232, 3549
XagI CCTNNNNNAGG 3 cut(s) 764, 3884, 3915
XbaI TCTAGA 2 cut(s) 2545, 3940
XceI RCATGY 3 cut(s) 346, 845, 2166
XcmI CCANNNNNNNNNTGG 2 cut(s) 466, 3729
XmiI GTMKAC 1 cut(s) 381
XmnI GAANNNNTTC 5 cut(s) 630, 1768, 1809, 2490, 3663
ZrmI AGTACT 5 cut(s) 108, 1371, 2832, 3674, 4460
Zsp2I ATGCAT 2 cut(s) 2006, 2128
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.