Rw1G015010

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Reverse (-)
33330399 .. 33339017
8619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G015010.1

Sequence Viewer

Length: 4548 bp
ATGGTCTGGGAAGACATGTTCGATTTAAGCAGAGCAATGAATTTCAGCAGGCTTGAATTTCAGACAGAATGGCTCCAGCAAAACTATCCCTGCTTGTGTGAGCACATTAGCATAGTTATGCAAGTTAGTTTCCTTGGCATCTTAGTACTGTATTACTTACAAAAAAGCATGGGCGAGATCTGCAAACAAAGAACAAATTTCCCAGACCAAGGCACAGAGAAGCATGGCACCGGCATTGGCATAAGATTCAGCACCATTTACAAGATCAGCATAGCTTGTTGCTCTTTACTGATGGTAACTCATTTCATATTGCTGCTGCTGTTGCTAAATGGAAGTGTGACTTACTGCAATCATAAAGTTCGTGCAATTTCATCCGAGGGTATGCAAGTGGTATCATGGGCAATATCATCGATTACAGTATACCAGATTGTGAATATCAAGTCCATCAAGTTTCCTTGGCTATTAAGAGCATGGTGGTTTTGCAGCTTCATCTTGTCCATCATCTCTGTGGCTGCTGATACTCACTTCCGTATCACATACCATGGTCAGCTTCGGTTACGTGATTATGCTGACTTCATAATTGTCCTTGGATCCGCCTACCTATTTGCTATTTCAATTCAAGGCAAGACAGGACTCACTCTCACCATCCCAAATGGCATCAGTGAACCACTTCTAAATGGAAAAGGTGATAAACAATCAGAAGGAAGACGAGAATCTCCATATGGAAAAGCTACTCTTCTCCAACTTGTCACATTCTCTTGGCTCAACCCTTTGTTTGCTGTTGGATTCAAGAAACCCATAGACCAGGAAGAAATCCCAGATGTCGATATCAAAGACTCAGCTGAGTATCTGTCTCACTCTTTTGATGAGAGACTGCAAAATGTTAAGGAGCTAGATGGAACCACAAACCCAGAAATCTACAAGACAATATACTTATTTATCAGGAAGAAAGCAGCAATCAATGCATTGTTTGCTGTTATATGTGCTGTTTCATCATATGTTGGTCCATATCTCATTGATGACTTTGTAAACTTTCTGACTGAGAAGAAAACTCGAAGCTTAGGGAGTGGCTATTTTCTTGCACTTGCCTTTCTAGGAGCTAAGATGGTTGAAACAATAGCACAGAGGCAATGGATTTTTGGGGCTCGACAGCTAGGGCTTCGCCTTAGAGCTGCTCTGATATCTCAAATTTTCAAGAAAGGCTTACGTCTATCAAGCCTATCCCGCCAAAGCCACACTAGCGGAGAGGTCATCAACTATATGAGTGTAGACATCCAAAGAATCACGGACTTCATCTGGTACTTAAACATAATATGGATGATGCCTATTCAAATTTCCTTGGCAATCTACATTCTTCATACAAATCTAGGCATGGGTTCATTAGCTGCATTAGCTGCAACTTTGGCAGTACTGCTTTGCAACATACCGATGACTAATCTCCAGAAAAGATATCAGACTAGGATCATGGAAGCCAAGGACAACAGGATGAAAGCCACTTCAGAAATTCTTCGAAGCATGAAGACAATCAAACTTCAGGCATGGGACAGTCAGTTCCTTCAAAAGTTAGAAAGTTTGAGGAAAGTAGAGTATGGTTGGCTATGGAAGTCACTACGACTGTCAGCAACTACCGCTTTCGTCTTTTGGGGATCACCCACATTTATCTCTGTGGTCACTTTCTGGGCTTGTATGCTGATGGGCATAGACCTCACAGCAGGGAGAGTTTTATCAGCACTGGCCACTTTCAGAATGTTACAAGACCCTATATTCAATCTACCTGACCTGCTCTCTGCGATTGCACAGGGAAAAGTATCTGCGGATAGAGTAGCTTCATATCTCATGGAAGATGAAATTCAGCAGGATGCCATTGAGCATTTTCCAAAAGATCAAATGGTAAACTCCATTGAGATAGAAAATGGAAAATTTGGCTGGAATATTGAGCCAAGCAACACAACTCTTGATGGAATACAGTTAAAAGTGAAGAGGGGTATGAAAGTGGCAATTTGTGGGACTGTAGGATCAGGGAAGTCTAGCCTTCTGTCATGCATTCTTGGAGAAATTCAGAAGTTGTCAGGGACAGTGAAGATCAGCGGTACAAAGGCTTATGTTCCTCAATCTCCATGGATTCTGACAGGAAATATCAGGGAGAATATTCTTTTTGGAAAGGCATACGACAAGGCCAAGTATGACAGAACTGTGAAAGCATGTGCATTGGAAAAGGATTTTGAGCTATTCTCATGTGGAGATCTAACAGAAATTGGAGAAAGAGGAATTAATATGAGTGGAGGACAGAAGCAAAGGATACAAATTGCTCGTGCAGTTTACCAGGATGCTGATATATATTTACTCGATGACCCTTTTAGTGCTGTTGATGCTCACACAGGCACCCAACTCTTTGAGGACTGCATGATGGGTCTTCTCAGAGAGAAGACCACTCTTTATGTCACTCACCAGGTTGAGTTTCTGCCAGCAGCGGACATAATTCTGGTGATGCAAAATGGAAAGATTGTGCAAGCTGGAAGCTTTGAAGAGCTTCTAAAACAAAATACAGGCTTTGAAGTTTTGGTTGGTGCTCATAGCCGAGCTCTAGAGTCAATCCTTACAGTTGAAAATAGCAGCAGAACTACTCAAGATCCAACACCTGAGAGTGAACCCAATATAGAGTCCACTTCAGATGCTGAACTTCAACAGACACGACAGGAATCTGAGCATAATCTCTCTCTAGAGATTACTGAAAAAGAAGGAAAATTGGTTCAAGATGAAGAGAGAGAGAAAGGAAGCATTGGAAAAGAAGTTTACTGGTCGTATTTGACAACTGTGAAAGGTGGTGTACTAATTCCAATCATAATCTTGGCACAGTCATCTTTCCAAGTACTGCAGGTAGCTAGTAACTATTGGATGGCATGGGCTTCTCCTCCCACAAGTGAGACGGAGCCTAAAGTGGGAATAAAGTTCACATTACTTGTTTATGTACTACTTGCTGTTGGAAGTTCACTATGTGTGCTGCTGCGTGCATCGCTAGTAGCAGTTGCCGGACTTTCAACAGCACAAAAGCTCTTCACAACTATGCTACATAGTGTACTCCGAGCGCCAATGTCTTTTTTTGATTCAACACCAACCGGAAGAATCTTAAACCGGGCATCCACTGATCAAAGTGTGTTAGATTTGGAAATGGCAACCAGATTAGGTTGGTGTGCTTTCTCAATAATACAGATTCTAGGGACCATTGCAGTGATGTCGCAAGTAGCCTGGGAAGTGTTCGTGATATTCATTCCTGTAACTGCAATTTGCATATGGTATCAGCAATATTACATACCAACAGCAAGAGAACTGGCACGGTTATCAGGCATACAAAGAGCTCCCATCCTCCACCACTTTGCGGAATCTTTGGCAGGAGCAGCAACAATCCGTGCTTTTGACCAACAAGACCGATTTAGTGATGCAAACCTCAGTCTTATTGACAGCCACTCAAGACCATGGTTCCATAATGTGTCAGCAATGGAATGGCTTTCTTTCAGACTAAATATACTCTCCAACTTCGTGTTTGCCTTCTCATTGGTTCTATTGGTGACCCTCCCTGAAGGAGTTATTAATCCAAGCATTGCAGGGTTGGCAGTAACGTATGGAATAAACTTGAATGTCTTGCAAGCTTCAGTTATATGGAACATGTGCAATGCAGAAAATAAGATGATCTCAGTTGAAAGAATTTTGCAGTACTCAAATCTAACAAGTGAAGCAGCTCTTGTAATTGAAGATAGCAAACCACCAATGAACTGGCCGCAAGTTGGAACAATTTGTTTCAAAAATCTACAGATCCGTTATGCTGAACATCTCCCATCTGTCCTAAAAAACATTAGCTGCACATTTCCGGGACAGAACAAAGTTGGGGTTGTAGGAAGGACCGGCAGTGGGAAATCAACCCTCATACAGGCCCTTTTCAGGATAGTTGAACCTAGAGAAGGAAGCATTATAATTGATGATGTAGACATTTGCAAAATCGGCCTTCATGATTTAAGATCAAGGCTTAGCATCATTCCTCAGGACCCAACAATGTTTGAAGGAACAGTGAGAGGAAACCTCGACCCACTGGAGCAATACTCTGACAGTGATGTCTGGGAGGCTCTAGATAAATGTCAGCTAGGTGATCTAGTGCGTGCAAAGGAAGAGAAGTTGGATGCATCAGTGGTCGAAAATGGAGAAAATTGGAGTGCGGGCCAAAGACAGTTGGTTTGCCTTGGAAGAGCATTGCTCAAGAAAAGCAGAATTCTGGTATTGGATGAAGCAACCGCATCAGTCGATTCTGCAACTGATGGGGTGATCCAGAAGATCATCAGCCAAGAATTCAAAGATCGAACTGTCGTTACAATAGCTCACAGAATCCACACAGTTATAGACAGTGATCTCGTTTTGGTCCTTAGCGATGGAAGGATTGCAGAATATGACACGCCAGCCAAGCTACTAGAGAGAGAAGAGTCCTTATTTTCCAAACTCATAAAGGAGTACTCAATGAGATCCCAGAGCTTCAATAGCTTTCCAAATCTACATAACTAA

Protein Analysis

1515

Amino Acids

169.54

Weight (kDa)

6.37

Isoelectric Point (pI)

38.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 320 - 587 9.6e-31 ABC transporter transmembrane region
ABC_tran PF00005 652 - 786 5.2e-20 ABC transporter
ABC_membrane PF00664 963 - 1191 5.2e-34 ABC transporter transmembrane region
ABC_tran PF00005 1281 - 1429 4.3e-26 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3968
AasI GACNNNNNNGTC 1 cut(s) 4106
Acc36I ACCTGC 2 cut(s) 1788, 2866
AccB1I GGYRCC 2 cut(s) 227, 2381
AccI GTMKAC 3 cut(s) 420, 1269, 3981
AclWI GGATC 9 cut(s) 585, 598, 1469, 1654, 2023, 2624, 3805, 4309, 4503
AcoI YGGCCR 2 cut(s) 1734, 3773
AcuI CTGAAG 5 cut(s) 1482, 1517, 2652, 3597, 3633
AdeI CACNNNGTG 1 cut(s) 2996
AfiI CCNNNNNNNGG 8 cut(s) 209, 2939, 3376, 3782, 3906, 3925, 3936, 3956
AflIII ACRYGT 2 cut(s) 15, 3663
AjnI CCWGG 4 cut(s) 804, 2322, 2448, 3245
AjuI GAANNNNNNNTTGG 2 cut(s) 2547, 2579
AloI GAACNNNNNNTCC 5 cut(s) 34, 1535, 1567, 2733, 2765
Alw21I GWGCWC 4 cut(s) 105, 2572, 2584, 3358
Alw26I GTCTC 3 cut(s) 858, 865, 2918
AlwI GGATC 9 cut(s) 585, 598, 1469, 1654, 2023, 2624, 3805, 4309, 4503
AlwNI CAGNNNCTG 1 cut(s) 2675
AoxI GGCC 6 cut(s) 1734, 2175, 3773, 3927, 3997, 4210
ArsI GACNNNNNNTTYG 2 cut(s) 4209, 4241
AseI ATTAAT 2 cut(s) 2271, 3588
Asp700I GAANNNNTTC 3 cut(s) 669, 1506, 2529
AspLEI GCGC 1 cut(s) 3088
AspS9I GGNCC 7 cut(s) 1004, 3219, 3897, 3928, 4039, 4210, 4408
AsuC2I CCSGG 2 cut(s) 3134, 3867
AsuHPI GGTGA 8 cut(s) 634, 698, 1641, 2438, 2497, 3577, 4151, 4324
AsuII TTCGAA 1 cut(s) 1510
AvaII GGWCC 5 cut(s) 1004, 3219, 3897, 4039, 4408
AxyI CCTNAGG 1 cut(s) 4035
BaeI ACNNNNGTAYC 2 cut(s) 514, 547
BalI TGGCCA 1 cut(s) 1736
BamHI GGATCC 1 cut(s) 590
BanI GGYRCC 2 cut(s) 227, 2381
BanII GRGCYC 3 cut(s) 1147, 2584, 3358
BauI CACGAG 1 cut(s) 2310
BbsI GAAGAC 5 cut(s) 18, 712, 1526, 2405, 2432
Bbv12I GWGCWC 4 cut(s) 105, 2572, 2584, 3358
BcgI CGANNNNNNTGC 4 cut(s) 390, 424, 3216, 3250
BciT130I CCWGG 4 cut(s) 806, 2324, 2450, 3247
BciVI GTATCC 1 cut(s) 2292
BclI TGATCA 1 cut(s) 3145
BcnI CCSGG 2 cut(s) 3134, 3867
BcoDI GTCTC 3 cut(s) 858, 865, 2918
BfmI CTRYAG 3 cut(s) 2010, 2873, 3806
BfoI RGCGCY 1 cut(s) 3089
BfuAI ACCTGC 2 cut(s) 1788, 2866
BfuI GTATCC 1 cut(s) 2292
BglII AGATCT 2 cut(s) 177, 2242
BlpI GCTNAGC 1 cut(s) 4022
BmcAI AGTACT 5 cut(s) 147, 1410, 2871, 3713, 4499
Bme1390I CCNGG 6 cut(s) 806, 2324, 2450, 3134, 3247, 3867
Bme18I GGWCC 5 cut(s) 1004, 3219, 3897, 4039, 4408
BmgT120I GGNCC 7 cut(s) 1004, 3219, 3897, 3928, 4039, 4210, 4408
BmiI GGNNCC 9 cut(s) 74, 229, 592, 901, 2383, 2931, 3220, 3479, 4041
BmrFI CCNGG 6 cut(s) 806, 2324, 2450, 3134, 3247, 3867
BpiI GAAGAC 5 cut(s) 18, 712, 1526, 2405, 2432
BplI GAGNNNNNCTC 8 cut(s) 2216, 2248, 4059, 4091, 4079, 4111, 4230, 4262
BpmI CTGGAG 3 cut(s) 59, 1424, 4106
Bpu10I CCTNAGC 2 cut(s) 1060, 4412
Bpu1102I GCTNAGC 1 cut(s) 4022
Bpu14I TTCGAA 1 cut(s) 1510
BpuEI CTTGAG 3 cut(s) 2610, 3451, 4232
BpuMI CCSGG 2 cut(s) 3134, 3867
Bsa29I ATCGAT 1 cut(s) 410
BsaAI YACGTR 1 cut(s) 560
BsaWI WCCGGW 1 cut(s) 3116
Bsc4I CCNNNNNNNGG 8 cut(s) 209, 2939, 3376, 3782, 3906, 3925, 3936, 3956
Bse118I RCCGGY 2 cut(s) 230, 3899
Bse1I ACTGG 5 cut(s) 1737, 2801, 3333, 3776, 4089
Bse21I CCTNAGG 1 cut(s) 4035
Bse3DI GCAATG 7 cut(s) 42, 1136, 3222, 3501, 3597, 3676, 4241
BseBI CCWGG 4 cut(s) 806, 2324, 2450, 3247
BseCI ATCGAT 1 cut(s) 410
BseLI CCNNNNNNNGG 8 cut(s) 209, 2939, 3376, 3782, 3906, 3925, 3936, 3956
BseMI GCAATG 7 cut(s) 42, 1136, 3222, 3501, 3597, 3676, 4241
BseMII CTCAG 9 cut(s) 834, 852, 1032, 2431, 2631, 2694, 3460, 3705, 4049
BseNI ACTGG 5 cut(s) 1737, 2801, 3333, 3776, 4089
BseRI GAGGAG 1 cut(s) 2901
BsgI GTGCAG 2 cut(s) 2334, 3841
BshFI GGCC 6 cut(s) 1736, 2177, 3775, 3929, 3999, 4212
BshNI GGYRCC 2 cut(s) 227, 2381
BshVI ATCGAT 1 cut(s) 410
BsiHKAI GWGCWC 4 cut(s) 105, 2572, 2584, 3358
BsiSI CCGG 6 cut(s) 231, 3030, 3117, 3133, 3866, 3900
BslFI GGGAC 5 cut(s) 1556, 2020, 2086, 3232, 3882
BslI CCNNNNNNNGG 8 cut(s) 209, 2939, 3376, 3782, 3906, 3925, 3936, 3956
BsmAI GTCTC 3 cut(s) 858, 865, 2918
BsmBI CGTCTC 1 cut(s) 2918
BsmFI GGGAC 5 cut(s) 1556, 2020, 2086, 3232, 3882
BsmI GAATGC 1 cut(s) 2043
BsnI GGCC 6 cut(s) 1736, 2177, 3775, 3929, 3999, 4212
Bsp119I TTCGAA 1 cut(s) 1510
Bsp1286I GDGCHC 5 cut(s) 105, 1147, 2572, 2584, 3358
Bsp1720I GCTNAGC 1 cut(s) 4022
Bsp19I CCATGG 3 cut(s) 541, 2117, 3473
BspANI GGCC 6 cut(s) 1736, 2177, 3775, 3929, 3999, 4212
BspCNI CTCAG 9 cut(s) 835, 851, 1033, 2430, 2632, 2695, 3459, 3704, 4048
BspDI ATCGAT 1 cut(s) 410
BspHI TCATGA 1 cut(s) 4003
BspLI GGNNCC 9 cut(s) 74, 229, 592, 901, 2383, 2931, 3220, 3479, 4041
BspMAI CTGCAG 1 cut(s) 2877
BspMI ACCTGC 2 cut(s) 1788, 2866
BspPI GGATC 9 cut(s) 585, 598, 1469, 1654, 2023, 2624, 3805, 4309, 4503
BspQI GCTCTTC 3 cut(s) 2520, 3059, 4231
BspT104I TTCGAA 1 cut(s) 1510
BspT107I GGYRCC 2 cut(s) 227, 2381
BsrDI GCAATG 7 cut(s) 42, 1136, 3222, 3501, 3597, 3676, 4241
BsrFI RCCGGY 2 cut(s) 230, 3899
BsrI ACTGG 5 cut(s) 1737, 2801, 3333, 3776, 4089
BssAI RCCGGY 2 cut(s) 230, 3899
BssNAI GTATAC 1 cut(s) 421
BssSI CACGAG 1 cut(s) 2310
Bst1107I GTATAC 1 cut(s) 421
Bst2BI CACGAG 1 cut(s) 2310
Bst2UI CCWGG 4 cut(s) 806, 2324, 2450, 3247
Bst6I CTCTTC 8 cut(s) 741, 1973, 2520, 2754, 3059, 4155, 4231, 4461
BstAPI GCANNNNNTGC 3 cut(s) 962, 971, 1394
BstBAI YACGTR 1 cut(s) 560
BstBI TTCGAA 1 cut(s) 1510
BstC8I GCNNGC 8 cut(s) 50, 2466, 2511, 3009, 3645, 4152, 4210, 4446
BstDSI CCRYGG 3 cut(s) 541, 2117, 3473
BstEII GGTNACC 1 cut(s) 3565
BstENI CCTNNNNNAGG 2 cut(s) 3923, 3954
BstH2I RGCGCY 1 cut(s) 3089
BstHHI GCGC 1 cut(s) 3088
BstMAI GTCTC 3 cut(s) 858, 865, 2918
BstNI CCWGG 4 cut(s) 806, 2324, 2450, 3247
BstNSI RCATGY 3 cut(s) 19, 2205, 3667
BstPI GGTNACC 1 cut(s) 3565
BstSCI CCNGG 6 cut(s) 804, 2322, 2448, 3132, 3245, 3865
BstSFI CTRYAG 3 cut(s) 2010, 2873, 3806
BstV2I GAAGAC 5 cut(s) 18, 712, 1526, 2405, 2432
BstX2I RGATCY 6 cut(s) 177, 590, 2242, 2629, 3810, 4508
BstXI CCANNNNNNTGG 1 cut(s) 3771
BstYI RGATCY 6 cut(s) 177, 590, 2242, 2629, 3810, 4508
BstZ17I GTATAC 1 cut(s) 421
Bsu15I ATCGAT 1 cut(s) 410
Bsu36I CCTNAGG 1 cut(s) 4035
BsuI GTATCC 1 cut(s) 2292
BsuRI GGCC 6 cut(s) 1736, 2177, 3775, 3929, 3999, 4212
BsuTUI ATCGAT 1 cut(s) 410
BtgI CCRYGG 3 cut(s) 541, 2117, 3473
BtgZI GCGATG 2 cut(s) 2997, 4431
BtsI GCAGTG 2 cut(s) 3234, 3910
BveI ACCTGC 2 cut(s) 1788, 2866
Cac8I GCNNGC 8 cut(s) 50, 2466, 2511, 3009, 3645, 4152, 4210, 4446
CaiI CAGNNNCTG 1 cut(s) 2675
CciI TCATGA 1 cut(s) 4003
CfoI GCGC 1 cut(s) 3088
Cfr10I RCCGGY 2 cut(s) 230, 3899
Cfr13I GGNCC 7 cut(s) 1004, 3219, 3897, 3928, 4039, 4210, 4408
ClaI ATCGAT 1 cut(s) 410
CsiI ACCWGGT 1 cut(s) 2448
DraIII CACNNNGTG 1 cut(s) 2996
DrdI GACNNNNNNGTC 1 cut(s) 4106
DseDI GACNNNNNNGTC 1 cut(s) 4106
EaeI YGGCCR 2 cut(s) 1734, 3773
Eam1104I CTCTTC 8 cut(s) 741, 1973, 2520, 2754, 3059, 4155, 4231, 4461
EarI CTCTTC 8 cut(s) 741, 1973, 2520, 2754, 3059, 4155, 4231, 4461
EciI GGCGGA 1 cut(s) 583
Ecl136II GAGCTC 2 cut(s) 2582, 3356
Eco24I GRGCYC 3 cut(s) 1147, 2584, 3358
Eco32I GATATC 3 cut(s) 829, 1182, 1451
Eco47I GGWCC 5 cut(s) 1004, 3219, 3897, 4039, 4408
Eco53kI GAGCTC 2 cut(s) 2582, 3356
Eco57I CTGAAG 5 cut(s) 1482, 1517, 2652, 3597, 3633
Eco81I CCTNAGG 1 cut(s) 4035
Eco91I GGTNACC 1 cut(s) 3565
EcoICRI GAGCTC 2 cut(s) 2582, 3356
EcoNI CCTNNNNNAGG 2 cut(s) 3923, 3954
EcoO109I RGGNCCY 2 cut(s) 3928, 4039
EcoO65I GGTNACC 1 cut(s) 3565
EcoRI GAATTC 2 cut(s) 4260, 4337
EcoRII CCWGG 4 cut(s) 804, 2322, 2448, 3245
EcoRV GATATC 3 cut(s) 829, 1182, 1451
EcoT22I ATGCAT 3 cut(s) 967, 2045, 4177
EcoT38I GRGCYC 3 cut(s) 1147, 2584, 3358
Esp3I CGTCTC 1 cut(s) 2918
FalI AAGNNNNNCTT 8 cut(s) 325, 357, 720, 752, 1187, 1219, 3723, 3755
FaqI GGGAC 5 cut(s) 1556, 2020, 2086, 3232, 3882
FauI CCCGC 2 cut(s) 1232, 4201
FauNDI CATATG 3 cut(s) 721, 997, 3290
FbaI TGATCA 1 cut(s) 3145
FblI GTMKAC 3 cut(s) 420, 1269, 3981
FriOI GRGCYC 3 cut(s) 1147, 2584, 3358
GlaI GCGC 1 cut(s) 3087
GsuI CTGGAG 3 cut(s) 59, 1424, 4106
HaeII RGCGCY 1 cut(s) 3089
HaeIII GGCC 6 cut(s) 1736, 2177, 3775, 3929, 3999, 4212
HapII CCGG 6 cut(s) 231, 3030, 3117, 3133, 3866, 3900
HhaI GCGC 1 cut(s) 3088
Hin6I GCGC 1 cut(s) 3086
HinP1I GCGC 1 cut(s) 3086
HindIII AAGCTT 3 cut(s) 1057, 2518, 3645
HpaII CCGG 6 cut(s) 231, 3030, 3117, 3133, 3866, 3900
HphI GGTGA 8 cut(s) 634, 698, 1641, 2438, 2497, 3577, 4151, 4324
HpyCH4IV ACGT 3 cut(s) 559, 1207, 3617
HpySE526I ACGT 3 cut(s) 559, 1207, 3617
HspAI GCGC 1 cut(s) 3086
Ksp22I TGATCA 1 cut(s) 3145
LguI GCTCTTC 3 cut(s) 2520, 3059, 4231
LmnI GCTCC 7 cut(s) 78, 889, 1097, 2929, 3361, 3392, 4087
MabI ACCWGGT 1 cut(s) 2448
MaeII ACGT 3 cut(s) 559, 1207, 3617
MflI RGATCY 6 cut(s) 177, 590, 2242, 2629, 3810, 4508
MhlI GDGCHC 5 cut(s) 105, 1147, 2572, 2584, 3358
MlsI TGGCCA 1 cut(s) 1736
MluNI TGGCCA 1 cut(s) 1736
MlyI GAGTC 5 cut(s) 627, 830, 2597, 2669, 4478
MmeI TCCRAC 7 cut(s) 763, 766, 2657, 2962, 3555, 3763, 4149
Mox20I TGGCCA 1 cut(s) 1736
Mph1103I ATGCAT 3 cut(s) 967, 2045, 4177
MroXI GAANNNNTTC 3 cut(s) 669, 1506, 2529
MscI TGGCCA 1 cut(s) 1736
MseI TTAA 9 cut(s) 26, 464, 885, 1304, 1970, 2271, 3128, 3588, 4010
MslI CAYNNNNRTG 5 cut(s) 116, 506, 1427, 3062, 3227
Msp20I TGGCCA 1 cut(s) 1736
MspA1I CMGCKG 3 cut(s) 842, 2088, 2471
MspI CCGG 6 cut(s) 231, 3030, 3117, 3133, 3866, 3900
MspR9I CCNGG 6 cut(s) 806, 2324, 2450, 3134, 3247, 3867
Mva1269I GAATGC 1 cut(s) 2043
MvaI CCWGG 4 cut(s) 806, 2324, 2450, 3247
NciI CCSGG 2 cut(s) 3134, 3867
NcoI CCATGG 3 cut(s) 541, 2117, 3473
NdeI CATATG 3 cut(s) 721, 997, 3290
NlaIV GGNNCC 9 cut(s) 74, 229, 592, 901, 2383, 2931, 3220, 3479, 4041
NmeAIII GCCGAG 1 cut(s) 2603
NmuCI GTSAC 6 cut(s) 337, 748, 1605, 1669, 2440, 3565
NsiI ATGCAT 3 cut(s) 967, 2045, 4177
NspI RCATGY 3 cut(s) 19, 2205, 3667
NspV TTCGAA 1 cut(s) 1510
PagI TCATGA 1 cut(s) 4003
PciI ACATGT 2 cut(s) 15, 3663
PciSI GCTCTTC 3 cut(s) 2520, 3059, 4231
PctI GAATGC 1 cut(s) 2043
PdmI GAANNNNTTC 3 cut(s) 669, 1506, 2529
PfoI TCCNGGA 1 cut(s) 3865
PleI GAGTC 5 cut(s) 627, 830, 2596, 2668, 4477
PpsI GAGTC 5 cut(s) 627, 830, 2596, 2668, 4477
Ppu21I YACGTR 1 cut(s) 560
PpuMI RGGWCCY 1 cut(s) 4039
PscI ACATGT 2 cut(s) 15, 3663
PshBI ATTAAT 2 cut(s) 2271, 3588
PsiI TTATAA 1 cut(s) 3968
Psp124BI GAGCTC 2 cut(s) 2584, 3358
Psp5II RGGWCCY 1 cut(s) 4039
Psp6I CCWGG 4 cut(s) 804, 2322, 2448, 3245
PspEI GGTNACC 1 cut(s) 3565
PspGI CCWGG 4 cut(s) 804, 2322, 2448, 3245
PspN4I GGNNCC 9 cut(s) 74, 229, 592, 901, 2383, 2931, 3220, 3479, 4041
PspPI GGNCC 7 cut(s) 1004, 3219, 3897, 3928, 4039, 4210, 4408
PspPPI RGGWCCY 1 cut(s) 4039
PsrI GAACNNNNNNTAC 2 cut(s) 4342, 4374
PstI CTGCAG 1 cut(s) 2877
PstNI CAGNNNCTG 1 cut(s) 2675
PsuI RGATCY 6 cut(s) 177, 590, 2242, 2629, 3810, 4508
PvuII CAGCTG 1 cut(s) 842
RseI CAYNNNNRTG 5 cut(s) 116, 506, 1427, 3062, 3227
SacI GAGCTC 2 cut(s) 2584, 3358
SapI GCTCTTC 3 cut(s) 2520, 3059, 4231
SaqAI TTAA 9 cut(s) 26, 464, 885, 1304, 1970, 2271, 3128, 3588, 4010
Sau96I GGNCC 7 cut(s) 1004, 3219, 3897, 3928, 4039, 4210, 4408
ScaI AGTACT 5 cut(s) 147, 1410, 2871, 3713, 4499
SchI GAGTC 5 cut(s) 627, 830, 2597, 2669, 4478
ScrFI CCNGG 6 cut(s) 806, 2324, 2450, 3134, 3247, 3867
SduI GDGCHC 5 cut(s) 105, 1147, 2572, 2584, 3358
SexAI ACCWGGT 1 cut(s) 2448
SfcI CTRYAG 3 cut(s) 2010, 2873, 3806
SfuI TTCGAA 1 cut(s) 1510
SinI GGWCC 5 cut(s) 1004, 3219, 3897, 4039, 4408
SmiMI CAYNNNNRTG 5 cut(s) 116, 506, 1427, 3062, 3227
SmlI CTYRAG 3 cut(s) 2625, 3466, 4247
SmoI CTYRAG 3 cut(s) 2625, 3466, 4247
SspI AATATT 3 cut(s) 1933, 2149, 3305
SstI GAGCTC 2 cut(s) 2584, 3358
StyD4I CCNGG 6 cut(s) 804, 2322, 2448, 3132, 3245, 3865
TaiI ACGT 3 cut(s) 562, 1210, 3620
TaqII GACCGA 1 cut(s) 3441
TatI WGTACW 8 cut(s) 145, 1408, 2827, 2869, 2968, 3076, 3711, 4497
TauI GCSGC 1 cut(s) 3778
Tru1I TTAA 9 cut(s) 26, 464, 885, 1304, 1970, 2271, 3128, 3588, 4010
Tru9I TTAA 9 cut(s) 26, 464, 885, 1304, 1970, 2271, 3128, 3588, 4010
TseFI GTSAC 6 cut(s) 337, 748, 1605, 1669, 2440, 3565
Tsp45I GTSAC 6 cut(s) 337, 748, 1605, 1669, 2440, 3565
TspGWI ACGGA 5 cut(s) 518, 1301, 2942, 3395, 3803
VpaK11BI GGWCC 5 cut(s) 1004, 3219, 3897, 4039, 4408
VspI ATTAAT 2 cut(s) 2271, 3588
XagI CCTNNNNNAGG 2 cut(s) 3923, 3954
XbaI TCTAGA 3 cut(s) 2584, 2719, 4120
XceI RCATGY 3 cut(s) 19, 2205, 3667
XcmI CCANNNNNNNNNTGG 2 cut(s) 505, 3768
XmiI GTMKAC 3 cut(s) 420, 1269, 3981
XmnI GAANNNNTTC 3 cut(s) 669, 1506, 2529
ZrmI AGTACT 5 cut(s) 147, 1410, 2871, 3713, 4499
Zsp2I ATGCAT 3 cut(s) 967, 2045, 4177
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.