MD07G1084200.v1.1

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
Physical Location & Seq
Reverse (-)
8674791 .. 8682588
7798 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1084200.v1.1.491

Sequence Viewer

Length: 4530 bp
ATGGCTTGGGAACACATGCTTGGTTTTCGGAGTGCTATTATAAATTTTAGGCTTCTTCAATTTCGGACAGAATGGCTCCAGCAAAACTTGCCCTGCCTGTCCGAGCACATTAGCATCGGTATGCAACTTGGTTTCCTCGGCATCTTGGCACTACATTTTGTACATAAAATCTGCAAACAAAGATCAAAGTTCCCAGACGAAGGCACAGAGAAGTATAGCCGCATTGGCTTACGATTCAGCACCATCTACAAAACCAGCATGGCTTGTTCCCTTCTTCTGATGTGCACTCATTTCGTAGTTTTTGTGCTGTTGCTAAATGGAAGGGTGACATACTGCAACTATAAGTTTCGTCCTGTTTCTTCGGAGAGCATGCAGGTGGTATCGTGGGCAATTTCATCAGTTTCGTTATACCAGATCGCGAATAGTAAGTCGATCAAGTTCCCTTGGCTATTAAGAGCGTGGTGGTTTTGCAGCTTCTTCTCGTCTGTTATCTCTGTGGCTGTTGATACTCATTTCCGACTCACGTACCATGGCGAGCTTAAGTTACAAGATTATGCTGGCTTCCTCAGTCTCCTTGCATCCACCTGCCTATGTGGTATTTCAGTACGAGGGAAGACAGGACTAACATTCGCCATCCCAAATGGCGTTACTGAACCACTTCTCAACAGAAAAGCTCACAAACATTCTGACGGAAAGAGAGAATCTCTATATGGAAAAGCCACTCTTCTCCAACTCATAACGTTCTCTTGGCTCAATCCCTTGTTTGTCATTGGATACAAGAAACCCCTTGAACCGGATGAAGTCCCAAATGTTGATATCAAAGACTCTGCTGAATTTCTGTCTCGCTCTTTTGACAAGAAACTAAAATTTATCAAGGAGAGAGATGGAACCACAGACCCAACAATCTACAAGACAATCTATTTATTCATCAGGAAGAAAGCAGCAATTAACGCAATGTTCGCTGTAATAAGTGCAGGAGCATCATATGTTGGTCCATACCTCATTGATGACTTCGTAACCTTTCTGAGTCAGAAGAGCACACGAAGCTTACAGAGCGGTTACATTCTTGCACTTGGCTTTCTAGGAGCTAAGATGGTTGAGACGATAGCACAGAGGCAATGGATTTTTGGGGCTCGACAGCTAGGCCTTCGGCTGAGAGCTGCACTTATATCTCAAATTTACAAAAAGGGCTTACTTCTGTCAAGCCAATCCCGCCAAAGCCACACTAGTGGAGAAGTCATCAATTACATGAGTGTAGATATCCAAAGAATCACAGATTTCATCTGGTACTTAAACATAATATGGATGATGCCTATTCAAATCTCATTGGCAATCTACATTCTTCATACGAATCTTGGCATGGGTTCTTTTGCTGCATTGGCAGCAACTTTGGGGGTTCTTCTTATCAACATACCGATGACTGCAATGCAGAAAAGATACCAGACTAGGATCATGGAAGCCAAGGACAACAGGATGAAAGCCACATCAGAAGTTCTTCGAAGCATGAAGACGATTAAACTTCAGGCATGGGATAGTCAGTTCCTACACAAGTTAGAAAGCTTGAGGAAGATAGAGTACAATTGGCTGTGGAAGTCACTGAGACTGTCAGCAATTGGGGCTTTTGTCTTCTGGGGATCACCCACATTTATCTCTGTGGTGACTTTCGTGGCATGCACGTTTATGGGAATAGAACTCACAGCGGGGAGAGTTTTATCAGCATTGGCCACCTTCAGAATGTTACAAGACCCTATATTTAATCTGCCTGACTTACTCTCCGTGATTGCACAGGGAAAGGTTTCGGCAGATAGAGTAGCTTCCTATCTCCAGGAAGATGAAATTCAGCAGGATGCCATTGAACATGTTCCGAAAGATCAGATGGAGTTTGCAATTGTTATAGAGAATGGAAAGTTTGGCTGGGATACCGATTCAAGTAGAACAACTCTTGATGCAATAAACTTAAAAGTGAAGAGGGGTATGAAAGTAGCAATTTGCGGGACTGTCGGATCAGGGAAATCCAGCCTGCTGTCATGCATTCTTGGAGAAATACAGAAAGTTTCTGGCTCAGTGAAAATCAGCGGTACAAAGGCTTACGTTCCTCAATCTCCATGGATACTTACAGGAAATATCAGGGACAATATTCTATTTGGAAATGCATACAACAAGGCCAAGTATGACAGAACTGTTAAAGCATGTGCTTTGGAGAAGGACTTTGAGCTATTCTCTGCAGGGGATCTAACAGAAATTGGAGAGAGAGGCATAAATATGAGTGGAGGACAGAAGCAAAGGATACAGATTGCTCGTGCGGTTTACCAGGATGCTGATATATATTTACTTGACGACCCTTTTAGCGCCGTTGATGCTCACACAGGCACCCAACTCTTTGAGGACTGCATGATGGGAATTCTCAGGGAAAAGACTATACTTTATGTCACCCACCAAGTTGAGTTTCTTCCAGCAGCAGACTTCATTCTGGTAATGCAAGATGGAAAAATCGCACAAGCTGGAGGATTCGAAGAGCTTCTGTCACAAAACATAGGATTTGAGCTTTTAGTTGGTGCTCATAGCCGAGCTCTAGAGTCAATCATCACAGTTGAAAATACTAGTAGAGCTTCTCAAGATCCAACACCTGACAGTGAATCGAACACAGACTCCACTTCAATCGCAGAACTTCAACAGACGCGGCAGGAATCAGAGCACAGTCTCTCTCTAGAGATTACAGAAAAAGAAGGAAAGTTGGTACAAGATGAAGAGAGAGAGAAAGGGAGCATAGGAAAAGAAGTTTACTGGTCTTATTTGACCATCGTGAAAGGTGGGGTGCTAGTACCAATTATAATCTTGGCACAGTCATCATTCCAAGCGCTACAGGTAGGTAGTAACTACTGGATGGCATGGGCTTCACCTCCTACAAGTGAGACCGAACCTCACATGGAAATCAGTTTCGTATTACTTATTTATATACTACTTGCCGTTGGAAGTTCACTTTGCGTGCTATTACGATCCTCCCTAGTTGTAATAGCAGGACTTTCAACAGCACAGAAGCTCTTCACAACGATGCTACATAGTGTGCTCCGAGCACCAATGTCCTTTTTTGATTCAACCCCAACTGGAAGAATCTTAAACCGGGCATCTACTGATCAAAGCGTGCTCGATCTGGAAATTGCTAACAAATTAGGTTGGTGTGCTTTCTCAATAATACAGCTTTTAGGGACCATTGCAGTGATGTCGCAGGTAGCATGGGAAGTCTTCGTCATCTTCATTCCAGTAACTGCAATCTGCATATGGTATCAGCGATACTACATACCAACAGCAAGAGAACTGGCACGTTTATCAGGCATAGAAAGAGCTCCGATCCTCCACCACTTTGCAGAATCACTAGCAGGAGCTGCGACAATCCGTGCTTTTGATCAACAAGAACGATTCAGTGATTCAAATCTCAGTCTTATTGACAACCATTCCAGGCCATGGTTTCATAATGTGTCAGCAATGGAATGGCTTTCTTTCAGACTAAATCTGCTCTCCAACTTTGTTTTCGCCTTCTCATTGATTCTGTTGGTTACCCTCCCAGAAGGAGTTATAAATCCTAGCATTGCAGGGTTGGCGGTAACATATGGAATAAATCTGAATGTTTTGCAAGCTTCTGTTATATGGAACATATGCAACGCAGAAAATAAGATGATCTCAGTCGAGAGAATTCTGCAGTACTCAAAACTAAAAAGTGAAGCACCTATGGTAATCGAAGAGTGCAGGCCACCAGTCAACTGGCCACAAGTTGGAACAATCTGTTTCAAAAATCTGCAGATTCGCTATGCTGAACATCTCCCATCTGTTCTGAAAAACATCAACTGCACATTCCCCGGACAGAACAAAGTTGGTGTTGTAGGAAGGACCGGAAGTGGGAAATCAACCCTCATACAAGCCATTTTCAGGGTAGTTGAACCTAGAGAAGGAAGCATTATAATTGATGATGTCGACATCTGCAAAATTGGCCTTCATGACCTAAGATCAAGGCTTAGCATCATTCCCCAAGACCCAACAATGTTTGAAGGAACAGTTAGAGGGAACCTCGATCCACTAGAGCAATATTCCGACAGTGATGTTTGGGAGGCTCTAGAGAAATGTCAGTTAGGTAATCTGGTGCGTGCGAAGGAAGAGAAGTTGGATGCCTCAGTGGTCGAAAATGGAGAAAACTGGAGCGTGGGGCAAAGGCAGTTAGTTTGTCTTGGAAGAGCCTTGCTGAAGAAAAGCAGAATTCTGGTATTGGATGAAGCAACGGCATCAGTTGATTCCGCAACTGATGGAGTGATACAGAAGGTCATCAGCCAAGAATTCAAAGATCGAACGGTTGTCACAATTGCTCACAGAATCCACACAGTAATAGATAGTGATCTGGTTTTGGTCCTCAGTGATGGACGGGTTGCAGAATACGACACACCAGCCAAGCTACTAGAGAGAGAAGAGTCCTTATTTTCTAAACTCATAAAGGAGTACTCAATGCGATCCCAGAACTTCAACAACTTAGCAACTCTCTAA

Protein Analysis

1510

Amino Acids

168.89

Weight (kDa)

8.13

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC_membrane PF00664 317 - 583 3.9e-28 ABC transporter transmembrane region
ABC_tran PF00005 648 - 782 2.8e-20 ABC transporter
ABC_membrane PF00664 953 - 1187 3.3e-36 ABC transporter transmembrane region
ABC_tran PF00005 1277 - 1425 3.2e-26 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 41, 2831, 3575, 3956
AarI CACCTGC 2 cut(s) 364, 593
Acc36I ACCTGC 3 cut(s) 364, 593, 3217
AccB1I GGYRCC 1 cut(s) 2369
AccB7I CCANNNNNTGG 2 cut(s) 3462, 3770
AccBSI CCGCTC 1 cut(s) 1056
AccI GTMKAC 1 cut(s) 3969
AccII CGCG 2 cut(s) 419, 2680
AclI AACGTT 1 cut(s) 740
AclWI GGATC 9 cut(s) 1457, 1642, 2011, 2238, 2612, 2991, 3343, 4061, 4491
AcoI YGGCCR 2 cut(s) 1722, 3761
AcsI RAATTY 9 cut(s) 43, 833, 866, 1176, 1836, 2400, 3690, 4248, 4325
AcuI CTGAAG 3 cut(s) 1505, 1714, 4256
AfeI AGCGCT 1 cut(s) 2859
AfiI CCNNNNNNNGG 7 cut(s) 200, 793, 3462, 3770, 3894, 3924, 3944
AflII CTTAAG 1 cut(s) 539
AflIII ACRYGT 1 cut(s) 1858
AhlI ACTAGT 2 cut(s) 1226, 2600
AjnI CCWGG 3 cut(s) 1824, 2310, 3455
AjuI GAANNNNNNNTTGG 5 cut(s) 35, 2430, 2462, 3512, 3544
AleI CACNNNNGTG 1 cut(s) 1227
AloI GAACNNNNNNTCC 4 cut(s) 1523, 1555, 2633, 2665
Alw26I GTCTC 6 cut(s) 575, 846, 1094, 1594, 2705, 2906
Alw44I GTGCAC 1 cut(s) 283
AlwI GGATC 9 cut(s) 1457, 1642, 2011, 2238, 2612, 2991, 3343, 4061, 4491
AlwNI CAGNNNCTG 2 cut(s) 3266, 3383
Aor51HI AGCGCT 1 cut(s) 2859
AoxI GGCC 7 cut(s) 1144, 1722, 2163, 3458, 3746, 3761, 3985
ApaLI GTGCAC 1 cut(s) 283
ApeKI GCWGC 7 cut(s) 471, 941, 1160, 1373, 1382, 2456, 3383
ApoI RAATTY 9 cut(s) 43, 833, 866, 1176, 1836, 2400, 3690, 4248, 4325
ArsI GACNNNNNNTTYG 2 cut(s) 413, 445
Asp700I GAANNNNTTC 6 cut(s) 657, 1494, 1795, 1860, 2517, 3041
AspLEI GCGC 2 cut(s) 2351, 2860
AspS9I GGNCC 4 cut(s) 992, 3207, 3885, 4396
AsuC2I CCSGG 2 cut(s) 3122, 3855
AsuHPI GGTGA 5 cut(s) 337, 1629, 1669, 2422, 2889
AsuII TTCGAA 2 cut(s) 1498, 2511
AvaII GGWCC 4 cut(s) 992, 3207, 3885, 4396
BaeGI GKGCMC 1 cut(s) 287
BaeI ACNNNNGTAYC 2 cut(s) 509, 542
BalI TGGCCA 2 cut(s) 1724, 3763
BanI GGYRCC 1 cut(s) 2369
BanII GRGCYC 3 cut(s) 1135, 2572, 3346
BarI GAAGNNNNNNTAC 2 cut(s) 1559, 1591
BauI CACGAG 1 cut(s) 2298
BbsI GAAGAC 4 cut(s) 620, 1514, 1618, 3235
BbvI GCAGC 7 cut(s) 483, 953, 1147, 1360, 1394, 2468, 3370
BceAI ACGGC 3 cut(s) 2336, 2951, 4287
BcgI CGANNNNNNTGC 4 cut(s) 274, 308, 3204, 3238
BciT130I CCWGG 3 cut(s) 1826, 2312, 3457
BciVI GTATCC 4 cut(s) 767, 1912, 2103, 2280
BclI TGATCA 2 cut(s) 3133, 3403
BcnI CCSGG 2 cut(s) 3122, 3855
BcoDI GTCTC 6 cut(s) 575, 846, 1094, 1594, 2705, 2906
BcuI ACTAGT 2 cut(s) 1226, 2600
BfmI CTRYAG 4 cut(s) 2223, 2861, 3695, 3794
BfoI RGCGCY 2 cut(s) 2352, 2861
BfrI CTTAAG 1 cut(s) 539
BfuAI ACCTGC 3 cut(s) 364, 593, 3217
BfuI GTATCC 4 cut(s) 767, 1912, 2103, 2280
BglI GCCNNNNNGGC 1 cut(s) 225
BisI GCNGC 9 cut(s) 220, 472, 942, 1161, 1374, 1383, 2457, 2681, 3384
BlpI GCTNAGC 1 cut(s) 4010
BlsI GCNGC 9 cut(s) 221, 473, 943, 1162, 1375, 1384, 2458, 2682, 3385
BmcAI AGTACT 2 cut(s) 3701, 4487
Bme1390I CCNGG 5 cut(s) 1826, 2312, 3122, 3457, 3855
Bme18I GGWCC 4 cut(s) 992, 3207, 3885, 4396
BmgT120I GGNCC 4 cut(s) 992, 3207, 3885, 4396
BmiI GGNNCC 5 cut(s) 77, 889, 2371, 3208, 4061
BmrFI CCNGG 5 cut(s) 1826, 2312, 3122, 3457, 3855
BpiI GAAGAC 4 cut(s) 620, 1514, 1618, 3235
BplI GAGNNNNNCTC 6 cut(s) 688, 720, 2204, 2236, 4047, 4079
BpmI CTGGAG 4 cut(s) 62, 1808, 2523, 4210
Bpu1102I GCTNAGC 1 cut(s) 4010
Bpu14I TTCGAA 2 cut(s) 1498, 2511
BpuEI CTTGAG 2 cut(s) 1582, 2598
BpuMI CCSGG 2 cut(s) 3122, 3855
BsaAI YACGTR 1 cut(s) 525
BsaBI GATNNNNATC 2 cut(s) 3429, 4383
BsaI GGTCTC 1 cut(s) 2906
BsaJI CCNNGG 7 cut(s) 136, 443, 529, 1461, 2105, 3461, 3853
BsaWI WCCGGW 2 cut(s) 793, 3887
BsaXI ACNNNNNCTCC 4 cut(s) 1757, 1787, 2633, 2663
Bsc4I CCNNNNNNNGG 7 cut(s) 200, 793, 3462, 3770, 3894, 3924, 3944
Bse1I ACTGG 8 cut(s) 2789, 2885, 3109, 3260, 3321, 3752, 3764, 4193
Bse3DI GCAATG 6 cut(s) 960, 1124, 1431, 3210, 3489, 3585
Bse8I GATNNNNATC 2 cut(s) 3429, 4383
BseBI CCWGG 3 cut(s) 1826, 2312, 3457
BseDI CCNNGG 7 cut(s) 136, 443, 529, 1461, 2105, 3461, 3853
BseJI GATNNNNATC 2 cut(s) 3429, 4383
BseLI CCNNNNNNNGG 7 cut(s) 200, 793, 3462, 3770, 3894, 3924, 3944
BseMI GCAATG 6 cut(s) 960, 1124, 1431, 3210, 3489, 3585
BseNI ACTGG 8 cut(s) 2789, 2885, 3109, 3260, 3321, 3752, 3764, 4193
BseSI GKGCMC 1 cut(s) 287
BseXI GCAGC 7 cut(s) 483, 953, 1147, 1360, 1394, 2468, 3370
BseYI CCCAGC 1 cut(s) 1914
BsgI GTGCAG 4 cut(s) 993, 1146, 3763, 3829
Bsh1236I CGCG 2 cut(s) 419, 2680
BshFI GGCC 7 cut(s) 1146, 1724, 2165, 3460, 3748, 3763, 3987
BshNI GGYRCC 1 cut(s) 2369
BsiSI CCGG 4 cut(s) 794, 3121, 3855, 3888
BslFI GGGAC 4 cut(s) 788, 2008, 2144, 3220
BslI CCNNNNNNNGG 7 cut(s) 200, 793, 3462, 3770, 3894, 3924, 3944
BsmAI GTCTC 6 cut(s) 575, 846, 1094, 1594, 2705, 2906
BsmBI CGTCTC 1 cut(s) 1094
BsmFI GGGAC 4 cut(s) 788, 2008, 2144, 3220
BsmI GAATGC 1 cut(s) 2031
BsnI GGCC 7 cut(s) 1146, 1724, 2165, 3460, 3748, 3763, 3987
Bso31I GGTCTC 1 cut(s) 2906
Bsp119I TTCGAA 2 cut(s) 1498, 2511
Bsp1407I TGTACA 1 cut(s) 160
Bsp1720I GCTNAGC 1 cut(s) 4010
Bsp19I CCATGG 3 cut(s) 529, 2105, 3461
Bsp68I TCGCGA 1 cut(s) 419
BspANI GGCC 7 cut(s) 1146, 1724, 2165, 3460, 3748, 3763, 3987
BspFNI CGCG 2 cut(s) 419, 2680
BspHI TCATGA 1 cut(s) 3991
BspLI GGNNCC 5 cut(s) 77, 889, 2371, 3208, 4061
BspMAI CTGCAG 3 cut(s) 2227, 3699, 3798
BspMI ACCTGC 3 cut(s) 364, 593, 3217
BspPI GGATC 9 cut(s) 1457, 1642, 2011, 2238, 2612, 2991, 3343, 4061, 4491
BspQI GCTCTTC 4 cut(s) 1028, 2508, 3047, 4219
BspT104I TTCGAA 2 cut(s) 1498, 2511
BspT107I GGYRCC 1 cut(s) 2369
BspTI CTTAAG 1 cut(s) 539
BspTNI GGTCTC 1 cut(s) 2906
BsrBI CCGCTC 1 cut(s) 1056
BsrDI GCAATG 6 cut(s) 960, 1124, 1431, 3210, 3489, 3585
BsrGI TGTACA 1 cut(s) 160
BsrI ACTGG 8 cut(s) 2789, 2885, 3109, 3260, 3321, 3752, 3764, 4193
BssECI CCNNGG 7 cut(s) 136, 443, 529, 1461, 2105, 3461, 3853
BssSI CACGAG 1 cut(s) 2298
BssT1I CCWWGG 5 cut(s) 443, 529, 1461, 2105, 3461
Bst2BI CACGAG 1 cut(s) 2298
Bst2UI CCWGG 3 cut(s) 1826, 2312, 3457
BstAFI CTTAAG 1 cut(s) 539
BstAPI GCANNNNNTGC 2 cut(s) 88, 3383
BstAUI TGTACA 1 cut(s) 160
BstBAI YACGTR 1 cut(s) 525
BstBI TTCGAA 2 cut(s) 1498, 2511
BstDSI CCRYGG 3 cut(s) 529, 2105, 3461
BstEII GGTNACC 1 cut(s) 3553
BstENI CCTNNNNNAGG 1 cut(s) 3942
BstFNI CGCG 2 cut(s) 419, 2680
BstH2I RGCGCY 2 cut(s) 2352, 2861
BstHHI GCGC 2 cut(s) 2351, 2860
BstMAI GTCTC 6 cut(s) 575, 846, 1094, 1594, 2705, 2906
BstNI CCWGG 3 cut(s) 1826, 2312, 3457
BstNSI RCATGY 5 cut(s) 19, 373, 1674, 1862, 2193
BstPI GGTNACC 1 cut(s) 3553
BstSCI CCNGG 5 cut(s) 1824, 2310, 3120, 3455, 3853
BstSFI CTRYAG 4 cut(s) 2223, 2861, 3695, 3794
BstSLI GKGCMC 1 cut(s) 287
BstUI CGCG 2 cut(s) 419, 2680
BstV1I GCAGC 7 cut(s) 483, 953, 1147, 1360, 1394, 2468, 3370
BstV2I GAAGAC 4 cut(s) 620, 1514, 1618, 3235
BstX2I RGATCY 2 cut(s) 2230, 2617
BstXI CCANNNNNNTGG 2 cut(s) 1229, 3759
BstYI RGATCY 2 cut(s) 2230, 2617
BsuI GTATCC 4 cut(s) 767, 1912, 2103, 2280
BsuRI GGCC 7 cut(s) 1146, 1724, 2165, 3460, 3748, 3763, 3987
BtgI CCRYGG 3 cut(s) 529, 2105, 3461
BtsI GCAGTG 1 cut(s) 3222
BtsIMutI CAGTG 8 cut(s) 1595, 2070, 2638, 3222, 3427, 4096, 4173, 4408
BtuMI TCGCGA 1 cut(s) 419
BveI ACCTGC 3 cut(s) 364, 593, 3217
CaiI CAGNNNCTG 2 cut(s) 3266, 3383
CciI TCATGA 1 cut(s) 3991
CfoI GCGC 2 cut(s) 2351, 2860
Cfr13I GGNCC 4 cut(s) 992, 3207, 3885, 4396
CseI GACGC 1 cut(s) 2686
EaeI YGGCCR 2 cut(s) 1722, 3761
Ecl136II GAGCTC 2 cut(s) 2570, 3344
Eco130I CCWWGG 5 cut(s) 443, 529, 1461, 2105, 3461
Eco147I AGGCCT 1 cut(s) 1146
Eco24I GRGCYC 3 cut(s) 1135, 2572, 3346
Eco31I GGTCTC 1 cut(s) 2906
Eco32I GATATC 2 cut(s) 817, 1261
Eco47I GGWCC 4 cut(s) 992, 3207, 3885, 4396
Eco47III AGCGCT 1 cut(s) 2859
Eco53kI GAGCTC 2 cut(s) 2570, 3344
Eco57I CTGAAG 3 cut(s) 1505, 1714, 4256
Eco91I GGTNACC 1 cut(s) 3553
EcoICRI GAGCTC 2 cut(s) 2570, 3344
EcoNI CCTNNNNNAGG 1 cut(s) 3942
EcoO65I GGTNACC 1 cut(s) 3553
EcoRI GAATTC 4 cut(s) 2400, 3690, 4248, 4325
EcoRII CCWGG 3 cut(s) 1824, 2310, 3455
EcoRV GATATC 2 cut(s) 817, 1261
EcoT14I CCWWGG 5 cut(s) 443, 529, 1461, 2105, 3461
EcoT22I ATGCAT 2 cut(s) 2033, 2155
EcoT38I GRGCYC 3 cut(s) 1135, 2572, 3346
ErhI CCWWGG 5 cut(s) 443, 529, 1461, 2105, 3461
Esp3I CGTCTC 1 cut(s) 1094
FalI AAGNNNNNCTT 2 cut(s) 708, 740
FaqI GGGAC 4 cut(s) 788, 2008, 2144, 3220
FauI CCCGC 3 cut(s) 1220, 1693, 1985
FauNDI CATATG 4 cut(s) 985, 3278, 3607, 3653
FbaI TGATCA 2 cut(s) 3133, 3403
FblI GTMKAC 1 cut(s) 3969
Fnu4HI GCNGC 9 cut(s) 220, 472, 942, 1161, 1374, 1383, 2457, 2681, 3384
FriOI GRGCYC 3 cut(s) 1135, 2572, 3346
Fsp4HI GCNGC 9 cut(s) 220, 472, 942, 1161, 1374, 1383, 2457, 2681, 3384
GlaI GCGC 2 cut(s) 2350, 2859
GluI GCNGC 9 cut(s) 220, 472, 942, 1161, 1374, 1383, 2457, 2681, 3384
GsaI CCCAGC 1 cut(s) 1918
GsuI CTGGAG 4 cut(s) 62, 1808, 2523, 4210
HaeII RGCGCY 2 cut(s) 2352, 2861
HaeIII GGCC 7 cut(s) 1146, 1724, 2165, 3460, 3748, 3763, 3987
HapII CCGG 4 cut(s) 794, 3121, 3855, 3888
HgaI GACGC 1 cut(s) 2686
HhaI GCGC 2 cut(s) 2351, 2860
Hin6I GCGC 2 cut(s) 2349, 2858
HinP1I GCGC 2 cut(s) 2349, 2858
HincII GTYRAC 2 cut(s) 3757, 3970
HindII GTYRAC 2 cut(s) 3757, 3970
HindIII AAGCTT 3 cut(s) 1045, 1558, 3633
HpaII CCGG 4 cut(s) 794, 3121, 3855, 3888
HphI GGTGA 5 cut(s) 337, 1629, 1669, 2422, 2889
Hpy166II GTNNAC 6 cut(s) 285, 2308, 2782, 2978, 3757, 3970
Hpy8I GTNNAC 6 cut(s) 285, 2308, 2782, 2978, 3757, 3970
HpyCH4IV ACGT 5 cut(s) 524, 740, 1676, 2091, 3322
HpySE526I ACGT 5 cut(s) 524, 740, 1676, 2091, 3322
HspAI GCGC 2 cut(s) 2349, 2858
Ksp22I TGATCA 2 cut(s) 3133, 3403
LguI GCTCTTC 4 cut(s) 1028, 2508, 3047, 4219
LmnI GCTCC 8 cut(s) 81, 977, 1085, 2763, 3072, 3349, 3380, 4191
Lsp1109I GCAGC 7 cut(s) 483, 953, 1147, 1360, 1394, 2468, 3370
MaeII ACGT 5 cut(s) 524, 740, 1676, 2091, 3322
MbiI CCGCTC 1 cut(s) 1056
MfeI CAATTG 4 cut(s) 1579, 1611, 1887, 4350
MflI RGATCY 2 cut(s) 2230, 2617
MlsI TGGCCA 2 cut(s) 1724, 3763
MluNI TGGCCA 2 cut(s) 1724, 3763
MlyI GAGTC 6 cut(s) 513, 818, 1036, 2585, 2642, 4466
MmeI TCCRAC 9 cut(s) 541, 754, 1981, 2645, 2950, 3543, 3751, 4110, 4137
Mox20I TGGCCA 2 cut(s) 1724, 3763
Mph1103I ATGCAT 2 cut(s) 2033, 2155
MroXI GAANNNNTTC 6 cut(s) 657, 1494, 1795, 1860, 2517, 3041
MscI TGGCCA 2 cut(s) 1724, 3763
MseI TTAA 9 cut(s) 452, 540, 948, 1292, 1515, 1755, 1958, 2184, 3116
MslI CAYNNNNRTG 8 cut(s) 119, 374, 1227, 1415, 1679, 2261, 3050, 3215
Msp20I TGGCCA 2 cut(s) 1724, 3763
MspA1I CMGCKG 2 cut(s) 1700, 2076
MspCI CTTAAG 1 cut(s) 539
MspI CCGG 4 cut(s) 794, 3121, 3855, 3888
MspR9I CCNGG 5 cut(s) 1826, 2312, 3122, 3457, 3855
MunI CAATTG 4 cut(s) 1579, 1611, 1887, 4350
Mva1269I GAATGC 1 cut(s) 2031
MvaI CCWGG 3 cut(s) 1826, 2312, 3457
MvnI CGCG 2 cut(s) 419, 2680
NciI CCSGG 2 cut(s) 3122, 3855
NcoI CCATGG 3 cut(s) 529, 2105, 3461
NdeI CATATG 4 cut(s) 985, 3278, 3607, 3653
NlaIV GGNNCC 5 cut(s) 77, 889, 2371, 3208, 4061
NmeAIII GCCGAG 2 cut(s) 117, 2591
NmuCI GTSAC 6 cut(s) 325, 1593, 1657, 2428, 2523, 4345
NruI TCGCGA 1 cut(s) 419
NsiI ATGCAT 2 cut(s) 2033, 2155
NspI RCATGY 5 cut(s) 19, 373, 1674, 1862, 2193
NspV TTCGAA 2 cut(s) 1498, 2511
OliI CACNNNNGTG 1 cut(s) 1227
PaeI GCATGC 2 cut(s) 373, 1674
PagI TCATGA 1 cut(s) 3991
PaqCI CACCTGC 2 cut(s) 364, 593
PceI AGGCCT 1 cut(s) 1146
PciI ACATGT 1 cut(s) 1858
PciSI GCTCTTC 4 cut(s) 1028, 2508, 3047, 4219
PctI GAATGC 1 cut(s) 2031
PdmI GAANNNNTTC 6 cut(s) 657, 1494, 1795, 1860, 2517, 3041
PflMI CCANNNNNTGG 2 cut(s) 3462, 3770
PfoI TCCNGGA 1 cut(s) 1824
PkrI GCNGC 9 cut(s) 221, 473, 943, 1162, 1375, 1384, 2458, 2682, 3385
PleI GAGTC 6 cut(s) 513, 818, 1035, 2584, 2642, 4465
PpsI GAGTC 6 cut(s) 513, 818, 1035, 2584, 2642, 4465
Ppu21I YACGTR 1 cut(s) 525
PscI ACATGT 1 cut(s) 1858
PsiI TTATAA 4 cut(s) 41, 2831, 3575, 3956
Psp124BI GAGCTC 2 cut(s) 2572, 3346
Psp1406I AACGTT 1 cut(s) 740
Psp6I CCWGG 3 cut(s) 1824, 2310, 3455
PspEI GGTNACC 1 cut(s) 3553
PspFI CCCAGC 1 cut(s) 1914
PspGI CCWGG 3 cut(s) 1824, 2310, 3455
PspN4I GGNNCC 5 cut(s) 77, 889, 2371, 3208, 4061
PspPI GGNCC 4 cut(s) 992, 3207, 3885, 4396
PstI CTGCAG 3 cut(s) 2227, 3699, 3798
PstNI CAGNNNCTG 2 cut(s) 3266, 3383
PsuI RGATCY 2 cut(s) 2230, 2617
RruI TCGCGA 1 cut(s) 419
RseI CAYNNNNRTG 8 cut(s) 119, 374, 1227, 1415, 1679, 2261, 3050, 3215
SacI GAGCTC 2 cut(s) 2572, 3346
SalI GTCGAC 1 cut(s) 3968
SapI GCTCTTC 4 cut(s) 1028, 2508, 3047, 4219
SaqAI TTAA 9 cut(s) 452, 540, 948, 1292, 1515, 1755, 1958, 2184, 3116
SatI GCNGC 9 cut(s) 220, 472, 942, 1161, 1374, 1383, 2457, 2681, 3384
Sau96I GGNCC 4 cut(s) 992, 3207, 3885, 4396
ScaI AGTACT 2 cut(s) 3701, 4487
SchI GAGTC 6 cut(s) 513, 818, 1036, 2585, 2642, 4466
ScrFI CCNGG 5 cut(s) 1826, 2312, 3122, 3457, 3855
SfcI CTRYAG 4 cut(s) 2223, 2861, 3695, 3794
SfuI TTCGAA 2 cut(s) 1498, 2511
SinI GGWCC 4 cut(s) 992, 3207, 3885, 4396
SmiMI CAYNNNNRTG 8 cut(s) 119, 374, 1227, 1415, 1679, 2261, 3050, 3215
SmlI CTYRAG 3 cut(s) 539, 1561, 2613
SmoI CTYRAG 3 cut(s) 539, 1561, 2613
SpeI ACTAGT 2 cut(s) 1226, 2600
SphI GCATGC 2 cut(s) 373, 1674
SseBI AGGCCT 1 cut(s) 1146
SspI AATATT 2 cut(s) 2137, 4082
SstI GAGCTC 2 cut(s) 2572, 3346
StuI AGGCCT 1 cut(s) 1146
StyD4I CCNGG 5 cut(s) 1824, 2310, 3120, 3455, 3853
StyI CCWWGG 5 cut(s) 443, 529, 1461, 2105, 3461
TaiI ACGT 5 cut(s) 527, 743, 1679, 2094, 3325
TaqII GACCGA 1 cut(s) 2930
TatI WGTACW 4 cut(s) 160, 1575, 3699, 4485
TauI GCSGC 2 cut(s) 222, 2683
Tru1I TTAA 9 cut(s) 452, 540, 948, 1292, 1515, 1755, 1958, 2184, 3116
Tru9I TTAA 9 cut(s) 452, 540, 948, 1292, 1515, 1755, 1958, 2184, 3116
TscAI CASTG 8 cut(s) 1602, 2070, 2638, 3222, 3427, 4096, 4173, 4408
TseFI GTSAC 6 cut(s) 325, 1593, 1657, 2428, 2523, 4345
TseI GCWGC 7 cut(s) 471, 941, 1160, 1373, 1382, 2456, 3383
Tsp45I GTSAC 6 cut(s) 325, 1593, 1657, 2428, 2523, 4345
TspGWI ACGGA 3 cut(s) 705, 1765, 3383
TspRI CASTG 8 cut(s) 1602, 2070, 2638, 3222, 3427, 4096, 4173, 4408
Van91I CCANNNNNTGG 2 cut(s) 3462, 3770
Vha464I CTTAAG 1 cut(s) 539
VneI GTGCAC 1 cut(s) 283
VpaK11BI GGWCC 4 cut(s) 992, 3207, 3885, 4396
XagI CCTNNNNNAGG 1 cut(s) 3942
XapI RAATTY 9 cut(s) 43, 833, 866, 1176, 1836, 2400, 3690, 4248, 4325
XbaI TCTAGA 3 cut(s) 2572, 2707, 4108
XceI RCATGY 5 cut(s) 19, 373, 1674, 1862, 2193
XcmI CCANNNNNNNNNTGG 1 cut(s) 3756
XmiI GTMKAC 1 cut(s) 3969
XmnI GAANNNNTTC 6 cut(s) 657, 1494, 1795, 1860, 2517, 3041
ZrmI AGTACT 2 cut(s) 3701, 4487
Zsp2I ATGCAT 2 cut(s) 2033, 2155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.