Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr05

Orthogroup ID

OG0001673

Physical Location & Seq

Genomic Coordinates Reverse (-)

47641978 .. 47643238

Gene Structure 1261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD05G1360400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1185 bp

ATGGCTTATCACTTATGCTCTTCGCCCTCTTCTCTCTTCCACAACCCCCGAACTCCCTCCCGCTCTCTCCCTTTTCCTTCCCCGACTAATTTTCGACTCAGAAGCTCTGCAATTCACACCCACAGACTCAGTTTTCCTCCGCTACAATTTCAGTCAACAACCTCTCTGCAAATACACCGTGTTTCGTTGCAAGACCAGGTTGCAGAAGAAGCCCAGAGCCCCAAAGACTCAGAAATTGAAAGTCTTCAGAGCCCAGATGGAAATTCCGGGTCTTTGTCGAAAAGCTACGTCTGGGTCAATCCCAGGAGCCCCAGAGCTTCACAGCTGCGGCACAAGTCCTACGATTCCAGGTACGCTTCTTTGGTGAAAGTAGCTGAGTATTTGAACTCTTGCGCTCCGATTGAAAGTGATGTTTCTGAAGCTTTAAAGGGTTTAGGGGATAATATTTTGGAACAAGACGCTGTGGTTGTTCTTAATAACATGAACAATCCGGAAAATGCTTTGCTTGCGCTTAACTACTTTCACAAGAGATTGAAACCCAAGAGGGAGGTGATTTTGTACAATGTGACTTTGAAAGTGTGTAGGAAGGGTAAGGATTTGGATAGAGCAGAGAAGCTGTTCGATCAACTACTCCAGAGAGGTGTTAAACCCGATAATGTTACCTTTTCGACTATGATTAGTTGTGCTAGGATGTGTTCTTTGCCTGATAAGGCTGTGGAGTGGTTTGAGAAGATGCCCAGTTTTGGGTGTAATCCGGATGATGTTACCTATTCGGCTATGATTGACGCCTATGGGCGTGCCGGTAAGGTTGAAATGGCTTTCAGTTTGTATGACCGAGCTAGGACTGAGAAGTGGCGCATCGATCCAGTGACGTTTTCTACATTGATCAAAATTCACGGGCAATCGGGGAATTTTGATGGGTGCTTGAATGTTTATGAGGAAATGAAAGCTATAGGGGCTAAGCCAAACTTGGTTATTTATAACACTTTGCTGGATGCCATGGGAAGAGCTAGGAGGCCTTGGCAGGCCAAGAAAATTTACCGAGAGATGATCAGCAGAGAGCTTTCACCAAATTGGGTGACCTATGCGTCTCTTTTAAGGGCCTATGGTAGAGCTCGCTACAGTGATGATGCTCTTAATGTTTATAAAGTGATGAAGGAGAAGGGGCTAGAGTTAAATAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031425 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

395

Amino Acids

44.7

Weight (kDa)

9.25

Isoelectric Point (pI)

53.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	184 - 228	1.6e-09	PPR repeat family
PPR_long	PF17177	190 - 291	1.6e-06	Pentacotripeptide-repeat region of PRORP
TPR_24	PF23276	234 - 350	2.2e-07	Fungal tetratrico peptide repeats
PPR_2	PF13041	235 - 264	4.8e-07	PPR repeat family
PPR_1	PF12854	249 - 279	1.9e-08	PPR repeat
PPR_2	PF13041	252 - 297	1.6e-09	PPR repeat family
PPR	PF01535	255 - 279	4.1e-07	PPR repeat
PPR_long	PF17177	261 - 392	5.3e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	286 - 335	1.9e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	322 - 369	1.6e-11	PPR repeat family
PPR_3	PF13812	345 - 391	1.5e-06	Pentatricopeptide repeat domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0001673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16390
fragaria_vesca	FvH4_3g00440 FvH4_3g00470
malus_domestica	MD00G1221000.v1.1 MD05G1360400.v1.1 MD08G1234300.v1.1 MD10G1337400.v1.1 MD10G1337800.v1.1 MD10G1338000.v1.1
prunus_persica	Prupe.3G138500_v2.0.a1 Prupe.4G005200_v2.0.a1
pyrus_communis	pycom05g32720 pycom10g28680 pycom10g28700 pycom10g28720 pycom10g28750
rosa_chinensis	RchiOBHm_Chr1g0364151 RchiOBHm_Chr2g0155431 RchiOBHm_Chr4g0402181 RchiOBHm_Chr5g0000631 RchiOBHm_Chr6g0271321
rosa_laevigata	RLG00000004254 RLG00000013858 RLG00000028931 RLG00000030883
rosa_multiflora	Rmu_co8004710.1_g000001 Rmu_co8021096.1_g000001 Rmu_co8161794.1_g000001 Rmu_sc0000795.1_g000110 Rmu_sc0001141.1_g000016 Rmu_sc0003662.1_g000007 Rmu_sc0003699.1_g000009 Rmu_sc0006695.1_g000081 Rmu_sc0010255.1_g000007 Rmu_sc0011992.1_g000014 Rmu_sc0016929.1_g000002 Rmu_sc0017523.1_g000008 Rmu_sc0021532.1_g000001 Rmu_sc0029877.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001310 Rroxscaffold_1G00075570 Rroxscaffold_4G00324290
rosa_rugosa	Rorug04G0385500 Rorug07G0309300.1
rosa_samantha	Rh5AG005400 Rh5BG007000 Rh5CG005700 Rh5DG005600
rosa_wichuraiana	Rw5G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	981, 1146
AasI	GACNNNNNNGTC	1 cut(s)	1087
AccBSI	CCGCTC	1 cut(s)	63
AccIII	TCCGGA	2 cut(s)	490, 754
AciI	CCGC	3 cut(s)	61, 140, 328
AclWI	GGATC	1 cut(s)	857
AcsI	RAATTY	4 cut(s)	262, 891, 910, 1035
AcuI	CTGAAG	2 cut(s)	230, 438
AcyI	GRCGYC	1 cut(s)	786
AfaI	GTAC	2 cut(s)	353, 560
AfiI	CCNNNNNNNGG	2 cut(s)	743, 744
AgsI	TTSAA	7 cut(s)	239, 385, 404, 535, 574, 812, 928
AjnI	CCWGG	3 cut(s)	195, 302, 347
Alw21I	GWGCWC	1 cut(s)	1117
Alw26I	GTCTC	1 cut(s)	1095
AlwI	GGATC	1 cut(s)	857
Aor13HI	TCCGGA	2 cut(s)	490, 754
AoxI	GGCC	3 cut(s)	1016, 1026, 1101
ApeKI	GCWGC	1 cut(s)	325
ApoI	RAATTY	4 cut(s)	262, 891, 910, 1035
Asp700I	GAANNNNTTC	2 cut(s)	243, 617
AspLEI	GCGC	3 cut(s)	395, 511, 858
AspS9I	GGNCC	1 cut(s)	1101
AsuC2I	CCSGG	1 cut(s)	268
AsuHPI	GGTGA	4 cut(s)	376, 562, 1059, 1090
BanII	GRGCYC	4 cut(s)	221, 254, 311, 1117
BbsI	GAAGAC	1 cut(s)	236
Bbv12I	GWGCWC	1 cut(s)	1117
BbvI	GCAGC	1 cut(s)	312
BccI	CCATC	2 cut(s)	251, 911
BciT130I	CCWGG	3 cut(s)	197, 304, 349
BclI	TGATCA	2 cut(s)	885, 1050
BcnI	CCSGG	1 cut(s)	268
BcoDI	GTCTC	1 cut(s)	1095
BfaI	CTAG	4 cut(s)	687, 840, 1011, 1169
BfmI	CTRYAG	2 cut(s)	951, 1120
BisI	GCNGC	2 cut(s)	326, 329
BlpI	GCTNAGC	1 cut(s)	960
BlsI	GCNGC	2 cut(s)	327, 330
Bme1390I	CCNGG	4 cut(s)	197, 268, 304, 349
BmgT120I	GGNCC	1 cut(s)	1101
BmiI	GGNNCC	1 cut(s)	308
BmrFI	CCNGG	4 cut(s)	197, 268, 304, 349
BmrI	ACTGGG	1 cut(s)	732
BmsI	GCATC	4 cut(s)	723, 867, 985, 1120
BmuI	ACTGGG	1 cut(s)	732
BpiI	GAAGAC	1 cut(s)	236
BpmI	CTGGAG	1 cut(s)	617
Bpu1102I	GCTNAGC	1 cut(s)	960
BpuMI	CCSGG	1 cut(s)	268
Bsa29I	ATCGAT	1 cut(s)	861
BsaHI	GRCGYC	1 cut(s)	786
BsaJI	CCNNGG	3 cut(s)	302, 999, 1019
BsaWI	WCCGGW	2 cut(s)	490, 754
Bsc4I	CCNNNNNNNGG	2 cut(s)	743, 744
Bse118I	RCCGGY	1 cut(s)	800
Bse1I	ACTGG	2 cut(s)	738, 866
BseAI	TCCGGA	2 cut(s)	490, 754
BseBI	CCWGG	3 cut(s)	197, 304, 349
BseCI	ATCGAT	1 cut(s)	861
BseDI	CCNNGG	3 cut(s)	302, 999, 1019
BseGI	GGATG	3 cut(s)	696, 763, 1000
BseLI	CCNNNNNNNGG	2 cut(s)	743, 744
BseMII	CTCAG	5 cut(s)	112, 142, 243, 366, 837
BseNI	ACTGG	2 cut(s)	738, 866
BseXI	GCAGC	1 cut(s)	312
BshFI	GGCC	3 cut(s)	1018, 1028, 1103
BshVI	ATCGAT	1 cut(s)	861
BsiHKAI	GWGCWC	1 cut(s)	1117
BsiSI	CCGG	4 cut(s)	267, 491, 755, 801
BslI	CCNNNNNNNGG	2 cut(s)	743, 744
BsmAI	GTCTC	1 cut(s)	1095
BsmBI	CGTCTC	1 cut(s)	1095
BsnI	GGCC	3 cut(s)	1018, 1028, 1103
Bsp1286I	GDGCHC	4 cut(s)	221, 254, 311, 1117
Bsp13I	TCCGGA	2 cut(s)	490, 754
Bsp1407I	TGTACA	1 cut(s)	558
Bsp143I	GATC	4 cut(s)	622, 862, 885, 1050
Bsp1720I	GCTNAGC	1 cut(s)	960
Bsp19I	CCATGG	1 cut(s)	999
BspACI	CCGC	3 cut(s)	61, 140, 328
BspANI	GGCC	3 cut(s)	1018, 1028, 1103
BspCNI	CTCAG	5 cut(s)	111, 141, 242, 367, 838
BspDI	ATCGAT	1 cut(s)	861
BspEI	TCCGGA	2 cut(s)	490, 754
BspLI	GGNNCC	1 cut(s)	308
BspPI	GGATC	1 cut(s)	857
BspQI	GCTCTTC	2 cut(s)	25, 1000
BsrBI	CCGCTC	1 cut(s)	63
BsrFI	RCCGGY	1 cut(s)	800
BsrGI	TGTACA	1 cut(s)	558
BsrI	ACTGG	2 cut(s)	738, 866
BssAI	RCCGGY	1 cut(s)	800
BssECI	CCNNGG	3 cut(s)	302, 999, 1019
BssMI	GATC	4 cut(s)	622, 862, 885, 1050
BssNI	GRCGYC	1 cut(s)	786
BssT1I	CCWWGG	2 cut(s)	999, 1019
Bst2UI	CCWGG	3 cut(s)	197, 304, 349
Bst4CI	ACNGT	2 cut(s)	179, 1124
Bst6I	CTCTTC	4 cut(s)	25, 34, 41, 1000
BstACI	GRCGYC	1 cut(s)	786
BstAUI	TGTACA	1 cut(s)	558
BstC8I	GCNNGC	4 cut(s)	507, 798, 1026, 1117
BstDEI	CTNAG	6 cut(s)	98, 128, 229, 375, 846, 960
BstDSI	CCRYGG	1 cut(s)	999
BstEII	GGTNACC	1 cut(s)	1078
BstF5I	GGATG	3 cut(s)	696, 763, 1000
BstHHI	GCGC	3 cut(s)	395, 511, 858
BstKTI	GATC	4 cut(s)	625, 865, 888, 1053
BstMAI	GTCTC	1 cut(s)	1095
BstMBI	GATC	4 cut(s)	622, 862, 885, 1050
BstMWI	GCNNNNNNNGC	3 cut(s)	209, 506, 956
BstNI	CCWGG	3 cut(s)	197, 304, 349
BstPI	GGTNACC	1 cut(s)	1078
BstSCI	CCNGG	4 cut(s)	195, 266, 302, 347
BstSFI	CTRYAG	2 cut(s)	951, 1120
BstV1I	GCAGC	1 cut(s)	312
BstV2I	GAAGAC	1 cut(s)	236
Bsu15I	ATCGAT	1 cut(s)	861
BsuRI	GGCC	3 cut(s)	1018, 1028, 1103
BsuTUI	ATCGAT	1 cut(s)	861
BtgI	CCRYGG	1 cut(s)	999
BtsCI	GGATG	3 cut(s)	696, 763, 1000
BtsIMutI	CAGTG	2 cut(s)	873, 1129
Cac8I	GCNNGC	4 cut(s)	507, 798, 1026, 1117
CfoI	GCGC	3 cut(s)	395, 511, 858
Cfr10I	RCCGGY	1 cut(s)	800
Cfr13I	GGNCC	1 cut(s)	1101
ClaI	ATCGAT	1 cut(s)	861
CseI	GACGC	3 cut(s)	467, 794, 1077
CsiI	ACCWGGT	1 cut(s)	195
Csp6I	GTAC	2 cut(s)	352, 559
CviAII	CATG	2 cut(s)	481, 1000
CviQI	GTAC	2 cut(s)	352, 559
DdeI	CTNAG	6 cut(s)	98, 128, 229, 375, 846, 960
DpnI	GATC	4 cut(s)	624, 864, 887, 1052
DpnII	GATC	4 cut(s)	622, 862, 885, 1050
DraI	TTTAAA	1 cut(s)	426
DrdI	GACNNNNNNGTC	1 cut(s)	1087
DseDI	GACNNNNNNGTC	1 cut(s)	1087
Eam1104I	CTCTTC	4 cut(s)	25, 34, 41, 1000
EarI	CTCTTC	4 cut(s)	25, 34, 41, 1000
Ecl136II	GAGCTC	1 cut(s)	1115
Eco130I	CCWWGG	2 cut(s)	999, 1019
Eco147I	AGGCCT	1 cut(s)	1018
Eco24I	GRGCYC	4 cut(s)	221, 254, 311, 1117
Eco53kI	GAGCTC	1 cut(s)	1115
Eco57I	CTGAAG	2 cut(s)	230, 438
Eco91I	GGTNACC	1 cut(s)	1078
EcoICRI	GAGCTC	1 cut(s)	1115
EcoO109I	RGGNCCY	1 cut(s)	1101
EcoO65I	GGTNACC	1 cut(s)	1078
EcoRII	CCWGG	3 cut(s)	195, 302, 347
EcoT14I	CCWWGG	2 cut(s)	999, 1019
EcoT38I	GRGCYC	4 cut(s)	221, 254, 311, 1117
ErhI	CCWWGG	2 cut(s)	999, 1019
Esp3I	CGTCTC	1 cut(s)	1095
FaeI	CATG	2 cut(s)	484, 1003
FalI	AAGNNNNNCTT	2 cut(s)	953, 985
FatI	CATG	2 cut(s)	480, 999
FauI	CCCGC	1 cut(s)	68
FbaI	TGATCA	2 cut(s)	885, 1050
Fnu4HI	GCNGC	2 cut(s)	326, 329
FokI	GGATG	3 cut(s)	703, 770, 1007
FriOI	GRGCYC	4 cut(s)	221, 254, 311, 1117
Fsp4HI	GCNGC	2 cut(s)	326, 329
FspBI	CTAG	4 cut(s)	687, 840, 1011, 1169
GlaI	GCGC	3 cut(s)	394, 510, 857
GluI	GCNGC	2 cut(s)	326, 329
GsuI	CTGGAG	1 cut(s)	617
HaeIII	GGCC	3 cut(s)	1018, 1028, 1103
HapII	CCGG	4 cut(s)	267, 491, 755, 801
HgaI	GACGC	3 cut(s)	467, 794, 1077
HhaI	GCGC	3 cut(s)	395, 511, 858
Hin1I	GRCGYC	1 cut(s)	786
Hin1II	CATG	2 cut(s)	484, 1003
Hin6I	GCGC	3 cut(s)	393, 509, 856
HinP1I	GCGC	3 cut(s)	393, 509, 856
HincII	GTYRAC	1 cut(s)	156
HindII	GTYRAC	1 cut(s)	156
HindIII	AAGCTT	1 cut(s)	420
HinfI	GANTC	4 cut(s)	96, 126, 227, 344
HpaII	CCGG	4 cut(s)	267, 491, 755, 801
HphI	GGTGA	4 cut(s)	376, 562, 1059, 1090
Hpy166II	GTNNAC	1 cut(s)	156
Hpy188I	TCNGA	5 cut(s)	101, 232, 249, 399, 418
Hpy188III	TCNNGA	3 cut(s)	491, 634, 755
Hpy8I	GTNNAC	1 cut(s)	156
HpyAV	CCTTC	4 cut(s)	87, 580, 1150, 1156
HpyCH4III	ACNGT	2 cut(s)	179, 1124
HpyCH4IV	ACGT	2 cut(s)	288, 872
HpyCH4V	TGCA	4 cut(s)	110, 169, 190, 203
HpyF10VI	GCNNNNNNNGC	3 cut(s)	209, 506, 956
HpyF3I	CTNAG	6 cut(s)	98, 128, 229, 375, 846, 960
HpySE526I	ACGT	2 cut(s)	288, 872
Hsp92I	GRCGYC	1 cut(s)	786
Hsp92II	CATG	2 cut(s)	484, 1003
HspAI	GCGC	3 cut(s)	393, 509, 856
Kpn2I	TCCGGA	2 cut(s)	490, 754
Ksp22I	TGATCA	2 cut(s)	885, 1050
Kzo9I	GATC	4 cut(s)	622, 862, 885, 1050
LguI	GCTCTTC	2 cut(s)	25, 1000
LmnI	GCTCC	2 cut(s)	306, 400
Lsp1109I	GCAGC	1 cut(s)	312
LweI	GCATC	4 cut(s)	723, 867, 985, 1120
MabI	ACCWGGT	1 cut(s)	195
MaeI	CTAG	4 cut(s)	687, 840, 1011, 1169
MaeII	ACGT	2 cut(s)	288, 872
MaeIII	GTNAC	5 cut(s)	565, 658, 763, 868, 1078
MalI	GATC	4 cut(s)	624, 864, 887, 1052
MbiI	CCGCTC	1 cut(s)	63
MboI	GATC	4 cut(s)	622, 862, 885, 1050
MboII	GAAGA	7 cut(s)	12, 21, 28, 218, 236, 742, 1017
MhlI	GDGCHC	4 cut(s)	221, 254, 311, 1117
MluCI	AATT	9 cut(s)	88, 111, 146, 234, 262, 891, 910, 1035, 1072
MlyI	GAGTC	3 cut(s)	90, 120, 221
MnlI	CCTC	9 cut(s)	37, 67, 147, 172, 537, 541, 632, 931, 1008
MroI	TCCGGA	2 cut(s)	490, 754
MroXI	GAANNNNTTC	2 cut(s)	243, 617
MseI	TTAA	7 cut(s)	425, 474, 513, 645, 1097, 1137, 1175
MspA1I	CMGCKG	1 cut(s)	325
MspI	CCGG	4 cut(s)	267, 491, 755, 801
MspR9I	CCNGG	4 cut(s)	197, 268, 304, 349
MvaI	CCWGG	3 cut(s)	197, 304, 349
MwoI	GCNNNNNNNGC	3 cut(s)	209, 506, 956
NciI	CCSGG	1 cut(s)	268
NcoI	CCATGG	1 cut(s)	999
NdeII	GATC	4 cut(s)	622, 862, 885, 1050
NlaIII	CATG	2 cut(s)	484, 1003
NlaIV	GGNNCC	1 cut(s)	308
NmuCI	GTSAC	3 cut(s)	565, 868, 1078
PceI	AGGCCT	1 cut(s)	1018
PciSI	GCTCTTC	2 cut(s)	25, 1000
PdmI	GAANNNNTTC	2 cut(s)	243, 617
PfeI	GAWTC	1 cut(s)	344
PkrI	GCNGC	2 cut(s)	327, 330
PleI	GAGTC	3 cut(s)	90, 120, 221
PpsI	GAGTC	3 cut(s)	90, 120, 221
PsiI	TTATAA	2 cut(s)	981, 1146
Psp124BI	GAGCTC	1 cut(s)	1117
Psp6I	CCWGG	3 cut(s)	195, 302, 347
PspEI	GGTNACC	1 cut(s)	1078
PspGI	CCWGG	3 cut(s)	195, 302, 347
PspN4I	GGNNCC	1 cut(s)	308
PspPI	GGNCC	1 cut(s)	1101
PvuII	CAGCTG	1 cut(s)	325
RsaI	GTAC	2 cut(s)	353, 560
RsaNI	GTAC	2 cut(s)	352, 559
SacI	GAGCTC	1 cut(s)	1117
SapI	GCTCTTC	2 cut(s)	25, 1000
SaqAI	TTAA	7 cut(s)	425, 474, 513, 645, 1097, 1137, 1175
SatI	GCNGC	2 cut(s)	326, 329
Sau3AI	GATC	4 cut(s)	622, 862, 885, 1050
Sau96I	GGNCC	1 cut(s)	1101
SchI	GAGTC	3 cut(s)	90, 120, 221
ScrFI	CCNGG	4 cut(s)	197, 268, 304, 349
SduI	GDGCHC	4 cut(s)	221, 254, 311, 1117
SexAI	ACCWGGT	1 cut(s)	195
SfaNI	GCATC	4 cut(s)	723, 867, 985, 1120
SfcI	CTRYAG	2 cut(s)	951, 1120
Sse9I	AATT	9 cut(s)	88, 111, 146, 234, 262, 891, 910, 1035, 1072
SseBI	AGGCCT	1 cut(s)	1018
SsiI	CCGC	3 cut(s)	61, 140, 328
SspI	AATATT	1 cut(s)	445
SspMI	CTAG	4 cut(s)	687, 840, 1011, 1169
SstI	GAGCTC	1 cut(s)	1117
StuI	AGGCCT	1 cut(s)	1018
StyD4I	CCNGG	4 cut(s)	195, 266, 302, 347
StyI	CCWWGG	2 cut(s)	999, 1019
TaaI	ACNGT	2 cut(s)	179, 1124
TaiI	ACGT	2 cut(s)	291, 875
TaqI	TCGA	5 cut(s)	94, 278, 621, 668, 861
TaqII	GACCGA	1 cut(s)	849
TasI	AATT	9 cut(s)	88, 111, 146, 234, 262, 891, 910, 1035, 1072
TatI	WGTACW	1 cut(s)	558
TauI	GCSGC	1 cut(s)	331
TfiI	GAWTC	1 cut(s)	344
Tru1I	TTAA	7 cut(s)	425, 474, 513, 645, 1097, 1137, 1175
Tru9I	TTAA	7 cut(s)	425, 474, 513, 645, 1097, 1137, 1175
TscAI	CASTG	2 cut(s)	873, 1129
TseFI	GTSAC	3 cut(s)	565, 868, 1078
TseI	GCWGC	1 cut(s)	325
Tsp45I	GTSAC	3 cut(s)	565, 868, 1078
TspDTI	ATGAA	3 cut(s)	497, 959, 1169
TspRI	CASTG	2 cut(s)	873, 1129
XapI	RAATTY	4 cut(s)	262, 891, 910, 1035
XmnI	GAANNNNTTC	2 cut(s)	243, 617
XspI	CTAG	4 cut(s)	687, 840, 1011, 1169

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.