Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011992.1

Orthogroup ID

OG0001673

Physical Location & Seq

Genomic Coordinates Reverse (-)

50885 .. 55109

Gene Structure 4225 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011992.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2607 bp

atgggttaccagaacaaagaagataagccagagtcctctgaggatgggtcggcggcgaggattctggatcttgatgtccggcttcctctgagcacgctgatggtggcgtttctttggcagtggagattctatgcgaagattgggtccatgcagactaccataagagacatggcgacagatctgttgacgggggatttggatttgggtattcgatcagtctgtggtgatatggtgaaggttaaggtgtcgctgaatttgtttacttttacttctttgattgatgggtattgtaaggctggtagtttagaggttgcaaatggattgcttaagggaataaataaatcattagttttaccagagagagcgaagaaggacgcgttcaagaaggcagcatgtgccgtgggtgaggcggcagttagggtttataaacgtcctccagttgggccgatccagttgtttggttctatttggtcctcaaatggcttatttacatcgcctaagtggaatacaggacgctactttcactcacaaggtcaatatagtaaaacgagacccttcctcccttctcaatttctcttagtcacagacgggaaaagctcaggccagctaactcttgatattcacaccttcaatctcaccttccctacacttcactccagaatttctctccaaataaaccatgtttctttacaagaaacccagagcccaaaacttgaaaaccctcaaagcccagatggcaattccgagtcttcgtccaaaagctatatctgggtcaatcccagcagccccagagcttcacagctcaggaagaaatcctatgattccaggtatgcttctctagtcaaagcggctgagtccttgaactctactggtctaagtgaaggtgatgttatcggtattttaaagggtttaggtgacagggttttggaacaagatgctgtggttgttctcaataatatggttaatcccgaaaatgcgttgcttgttctcaagtactttcagcggaggtttaaaccaaagagggaagtggttctctataatgtcaccttgaaagtttttaggaagtgtaaggatttggagagagcagagaagctgttttatgagatacttgagagaggtgttaaacccgataatgttacattttcgactatgattagctgtgctaggatgtgttttctgcctgataaggctgtggagtggtttgagaagatgcctacttttgggtgtaatcccgatgatgttacctattcagctatgattgacgcatatgggcgtgccggtaatgttgacaaggcttttagcttgtatgaccgcgctaggacagagaagtggcgcattgatccggtgacatttgcaacgttgattaagattcacgggcaatcggggaattatgatgggtgcttgaatgtttacgaggaaatgaaggctattggggtgaagccgaacatggttatttataataccttgttggatgctatgggaagagctaagagaccttggcaggccaagaaaatttaccgagagatgatcagcaaggggtctttgccaaattgggtgacctatgcatctctgctgcgggcctttggtagagctcgctatggggatgatgctctgaatgtgtacagggagatgaaggagaagggaatggagttgaatgtcattctctacaacacccttttgtctatgtgtgctgatattggctacactgatcaagctattgagattttcaaagacatgaagagttccgaaacttggaagcctgatagttggacattttcatccatgattaccatatattcctgtagcgggaaagtctcagaggcagagaggacgttgaatgagatggtggaagctggtttccagcctaatatctttattttgacatctctaatacaatgctatgggaaggccaagcgtactgatgatgttgtcaggtcattcaatcaactactagaattgggcataactcctgatgagcgtttctgtggttgtctcctgaatgtgatgacccaaacaccaaaggatgaactatctaagctgactgattgcattgagcggggtaatgagaagcttggatatgttgtaagacttctggtagagaagcaagacagtagtgaaaacttcaggaaggaagcatcagaactttttaattcagttggttccgatgtaaagaaggcctactgcaattgcttgattgatctttgtgtgaacctcgatctcttggagagagcctgtgagcttctagacctgggccttacacttgagatatacacagatatacagtcaaggtctccaacccagtggtctctgtatctcaagggtctctctcttggggcagctcttactgcattacatgtttggattaatgacttgtctcgttcgctggaatctggggaggagcttccacctctgctaggaattaataccggacatggcaaacataaatattcagataaaggtctagcgagtgtgttcgagtcacatttgaaggaagtagatgctccgttccatgaggccccagacaaggttggctggtttttgactaccaaggttgcagtgacgtcatggttggagtctagaaggtcaccacaagtagctgctgcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031425 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

868

Amino Acids

97.4

Weight (kDa)

8.33

Isoelectric Point (pI)

35.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16390
fragaria_vesca	FvH4_3g00440 FvH4_3g00470
malus_domestica	MD00G1221000.v1.1 MD05G1360400.v1.1 MD08G1234300.v1.1 MD10G1337400.v1.1 MD10G1337800.v1.1 MD10G1338000.v1.1
prunus_persica	Prupe.3G138500_v2.0.a1 Prupe.4G005200_v2.0.a1
pyrus_communis	pycom05g32720 pycom10g28680 pycom10g28700 pycom10g28720 pycom10g28750
rosa_chinensis	RchiOBHm_Chr1g0364151 RchiOBHm_Chr2g0155431 RchiOBHm_Chr4g0402181 RchiOBHm_Chr5g0000631 RchiOBHm_Chr6g0271321
rosa_laevigata	RLG00000004254 RLG00000013858 RLG00000028931 RLG00000030883
rosa_multiflora	Rmu_co8004710.1_g000001 Rmu_co8021096.1_g000001 Rmu_co8161794.1_g000001 Rmu_sc0000795.1_g000110 Rmu_sc0001141.1_g000016 Rmu_sc0003662.1_g000007 Rmu_sc0003699.1_g000009 Rmu_sc0006695.1_g000081 Rmu_sc0010255.1_g000007 Rmu_sc0011992.1_g000014 Rmu_sc0016929.1_g000002 Rmu_sc0017523.1_g000008 Rmu_sc0021532.1_g000001 Rmu_sc0029877.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001310 Rroxscaffold_1G00075570 Rroxscaffold_4G00324290
rosa_rugosa	Rorug04G0385500 Rorug07G0309300.1
rosa_samantha	Rh5AG005400 Rh5BG007000 Rh5CG005700 Rh5DG005600
rosa_wichuraiana	Rw5G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	426, 1458
AatII	GACGTC	1 cut(s)	2564
AccBSI	CCGCTC	1 cut(s)	2056
AccII	CGCG	2 cut(s)	377, 1314
AciI	CCGC	8 cut(s)	53, 410, 848, 1003, 1312, 1576, 1806, 2056
AclI	AACGTT	1 cut(s)	1358
AclWI	GGATC	3 cut(s)	75, 442, 1334
AcsI	RAATTY	3 cut(s)	253, 660, 1512
AcuI	CTGAAG	1 cut(s)	2107
AcyI	GRCGYC	1 cut(s)	2561
AfaI	GTAC	3 cut(s)	995, 1622, 1918
AfiI	CCNNNNNNNGG	6 cut(s)	440, 1220, 1752, 1806, 2414, 2524
AflII	CTTAAG	1 cut(s)	326
AflIII	ACRYGT	2 cut(s)	375, 2353
AjnI	CCWGG	2 cut(s)	824, 2247
Alw21I	GWGCWC	2 cut(s)	95, 1594
Alw26I	GTCTC	9 cut(s)	159, 544, 1486, 1819, 1997, 2295, 2310, 2327, 2379
AlwI	GGATC	3 cut(s)	75, 442, 1334
AoxI	GGCC	8 cut(s)	443, 601, 1503, 1578, 1908, 2175, 2251, 2514
ApeKI	GCWGC	6 cut(s)	389, 783, 1573, 2336, 2597, 2600
ApoI	RAATTY	3 cut(s)	253, 660, 1512
ArsI	GACNNNNNNTTYG	4 cut(s)	128, 160, 178, 210
AseI	ATTAAT	2 cut(s)	2364, 2421
Asp700I	GAANNNNTTC	1 cut(s)	1029
AspLEI	GCGC	2 cut(s)	1316, 1335
AspS9I	GGNCC	6 cut(s)	144, 443, 471, 1578, 2251, 2515
AvaII	GGWCC	2 cut(s)	144, 471
BanII	GRGCYC	2 cut(s)	707, 1594
BbsI	GAAGAC	1 cut(s)	741
Bbv12I	GWGCWC	2 cut(s)	95, 1594
BbvI	GCAGC	6 cut(s)	401, 795, 1560, 2348, 2584, 2587
BccI	CCATC	6 cut(s)	38, 94, 275, 728, 1388, 1837
BceAI	ACGGC	1 cut(s)	383
BciT130I	CCWGG	2 cut(s)	826, 2249
BclI	TGATCA	2 cut(s)	1527, 1708
BcoDI	GTCTC	9 cut(s)	159, 544, 1486, 1819, 1997, 2295, 2310, 2327, 2379
BfaI	CTAG	8 cut(s)	839, 1164, 1317, 1952, 2243, 2414, 2462, 2577
BfmI	CTRYAG	1 cut(s)	1801
BfrI	CTTAAG	1 cut(s)	326
BglI	GCCNNNNNGGC	1 cut(s)	735
BglII	AGATCT	1 cut(s)	178
BisI	GCNGC	9 cut(s)	54, 390, 411, 784, 849, 1574, 2337, 2598, 2601
BlsI	GCNGC	9 cut(s)	55, 391, 412, 785, 850, 1575, 2338, 2599, 2602
BmcAI	AGTACT	1 cut(s)	995
Bme1390I	CCNGG	2 cut(s)	826, 2249
Bme18I	GGWCC	2 cut(s)	144, 471
BmgT120I	GGNCC	6 cut(s)	144, 443, 471, 1578, 2251, 2515
BmiI	GGNNCC	3 cut(s)	145, 2161, 2517
BmrFI	CCNGG	2 cut(s)	826, 2249
BmrI	ACTGGG	1 cut(s)	2293
BmsI	GCATC	7 cut(s)	925, 1200, 1462, 1574, 1597, 2144, 2488
BmuI	ACTGGG	1 cut(s)	2293
BpiI	GAAGAC	1 cut(s)	741
BpmI	CTGGAG	2 cut(s)	420, 640
Bpu10I	CCTNAGC	2 cut(s)	598, 803
BpuEI	CTTGAG	4 cut(s)	974, 1130, 2282, 2300
BsaHI	GRCGYC	1 cut(s)	2561
BsaI	GGTCTC	5 cut(s)	544, 1486, 2295, 2310, 2327
BsaJI	CCNNGG	4 cut(s)	399, 1496, 2248, 2547
BsaWI	WCCGGW	2 cut(s)	1342, 2426
BsaXI	ACNNNNNCTCC	2 cut(s)	543, 573
Bsc4I	CCNNNNNNNGG	6 cut(s)	440, 1220, 1752, 1806, 2414, 2524
Bse118I	RCCGGY	1 cut(s)	1277
Bse1I	ACTGG	4 cut(s)	437, 451, 874, 2299
BseBI	CCWGG	2 cut(s)	826, 2249
BseDI	CCNNGG	4 cut(s)	399, 1496, 2248, 2547
BseGI	GGATG	6 cut(s)	49, 1173, 1477, 1609, 1778, 2029
BseLI	CCNNNNNNNGG	6 cut(s)	440, 1220, 1752, 1806, 2414, 2524
BseMII	CTCAG	6 cut(s)	30, 80, 612, 817, 843, 1830
BseNI	ACTGG	4 cut(s)	437, 451, 874, 2299
BseRI	GAGGAG	1 cut(s)	2411
BseXI	GCAGC	6 cut(s)	401, 795, 1560, 2348, 2584, 2587
BseYI	CCCAGC	1 cut(s)	779
Bsh1236I	CGCG	2 cut(s)	377, 1314
BshFI	GGCC	8 cut(s)	445, 603, 1505, 1580, 1910, 2177, 2253, 2516
BsiHKAI	GWGCWC	2 cut(s)	95, 1594
BsiSI	CCGG	4 cut(s)	79, 1278, 1343, 2427
BslI	CCNNNNNNNGG	6 cut(s)	440, 1220, 1752, 1806, 2414, 2524
BsmAI	GTCTC	9 cut(s)	159, 544, 1486, 1819, 1997, 2295, 2310, 2327, 2379
BsnI	GGCC	8 cut(s)	445, 603, 1505, 1580, 1910, 2177, 2253, 2516
Bso31I	GGTCTC	5 cut(s)	544, 1486, 2295, 2310, 2327
Bsp1286I	GDGCHC	3 cut(s)	95, 707, 1594
Bsp1407I	TGTACA	1 cut(s)	1620
Bsp143I	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
BspACI	CCGC	8 cut(s)	53, 410, 848, 1003, 1312, 1576, 1806, 2056
BspANI	GGCC	8 cut(s)	445, 603, 1505, 1580, 1910, 2177, 2253, 2516
BspCNI	CTCAG	6 cut(s)	31, 81, 611, 816, 844, 1829
BspFNI	CGCG	2 cut(s)	377, 1314
BspLI	GGNNCC	3 cut(s)	145, 2161, 2517
BspPI	GGATC	3 cut(s)	75, 442, 1334
BspQI	GCTCTTC	1 cut(s)	1477
BspTI	CTTAAG	1 cut(s)	326
BspTNI	GGTCTC	5 cut(s)	544, 1486, 2295, 2310, 2327
BsrBI	CCGCTC	1 cut(s)	2056
BsrFI	RCCGGY	1 cut(s)	1277
BsrGI	TGTACA	1 cut(s)	1620
BsrI	ACTGG	4 cut(s)	437, 451, 874, 2299
BssAI	RCCGGY	1 cut(s)	1277
BssECI	CCNNGG	4 cut(s)	399, 1496, 2248, 2547
BssMI	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
BssNI	GRCGYC	1 cut(s)	2561
BssT1I	CCWWGG	2 cut(s)	1496, 2547
Bst2UI	CCWGG	2 cut(s)	826, 2249
Bst4CI	ACNGT	2 cut(s)	2111, 2283
Bst6I	CTCTTC	2 cut(s)	1477, 1733
BstACI	GRCGYC	1 cut(s)	2561
BstAFI	CTTAAG	1 cut(s)	326
BstAPI	GCANNNNNTGC	1 cut(s)	395
BstAUI	TGTACA	1 cut(s)	1620
BstC8I	GCNNGC	6 cut(s)	95, 605, 1275, 1503, 1578, 1594
BstDSI	CCRYGG	1 cut(s)	399
BstEII	GGTNACC	3 cut(s)	5, 1555, 2583
BstENI	CCTNNNNNAGG	1 cut(s)	2412
BstF5I	GGATG	6 cut(s)	49, 1173, 1477, 1609, 1778, 2029
BstFNI	CGCG	2 cut(s)	377, 1314
BstHHI	GCGC	2 cut(s)	1316, 1335
BstKTI	GATC	9 cut(s)	70, 181, 215, 450, 1342, 1530, 1711, 2200, 2218
BstMAI	GTCTC	9 cut(s)	159, 544, 1486, 1819, 1997, 2295, 2310, 2327, 2379
BstMBI	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
BstMWI	GCNNNNNNNGC	3 cut(s)	395, 735, 2345
BstNI	CCWGG	2 cut(s)	826, 2249
BstNSI	RCATGY	2 cut(s)	396, 2357
BstPI	GGTNACC	3 cut(s)	5, 1555, 2583
BstSCI	CCNGG	2 cut(s)	824, 2247
BstSFI	CTRYAG	1 cut(s)	1801
BstUI	CGCG	2 cut(s)	377, 1314
BstV1I	GCAGC	6 cut(s)	401, 795, 1560, 2348, 2584, 2587
BstV2I	GAAGAC	1 cut(s)	741
BstX2I	RGATCY	2 cut(s)	67, 178
BstXI	CCANNNNNNTGG	2 cut(s)	458, 2301
BstYI	RGATCY	2 cut(s)	67, 178
BsuRI	GGCC	8 cut(s)	445, 603, 1505, 1580, 1910, 2177, 2253, 2516
BtgI	CCRYGG	1 cut(s)	399
BtgZI	GCGATG	1 cut(s)	477
BtsCI	GGATG	6 cut(s)	49, 1173, 1477, 1609, 1778, 2029
BtsI	GCAGTG	2 cut(s)	125, 2562
BtsIMutI	CAGTG	4 cut(s)	125, 1704, 2306, 2562
Cac8I	GCNNGC	6 cut(s)	95, 605, 1275, 1503, 1578, 1594
CfoI	GCGC	2 cut(s)	1316, 1335
Cfr10I	RCCGGY	1 cut(s)	1277
Cfr13I	GGNCC	6 cut(s)	144, 443, 471, 1578, 2251, 2515
CseI	GACGC	3 cut(s)	383, 522, 1271
Csp6I	GTAC	3 cut(s)	994, 1621, 1917
CviQI	GTAC	3 cut(s)	994, 1621, 1917
DpnI	GATC	9 cut(s)	69, 180, 214, 449, 1341, 1529, 1710, 2199, 2217
DpnII	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
DraI	TTTAAA	2 cut(s)	903, 1012
Eam1104I	CTCTTC	2 cut(s)	1477, 1733
EarI	CTCTTC	2 cut(s)	1477, 1733
Ecl136II	GAGCTC	1 cut(s)	1592
Eco130I	CCWWGG	2 cut(s)	1496, 2547
Eco147I	AGGCCT	1 cut(s)	2177
Eco24I	GRGCYC	2 cut(s)	707, 1594
Eco31I	GGTCTC	5 cut(s)	544, 1486, 2295, 2310, 2327
Eco47I	GGWCC	2 cut(s)	144, 471
Eco53kI	GAGCTC	1 cut(s)	1592
Eco57I	CTGAAG	1 cut(s)	2107
Eco91I	GGTNACC	3 cut(s)	5, 1555, 2583
EcoICRI	GAGCTC	1 cut(s)	1592
EcoNI	CCTNNNNNAGG	1 cut(s)	2412
EcoO109I	RGGNCCY	1 cut(s)	2515
EcoO65I	GGTNACC	3 cut(s)	5, 1555, 2583
EcoRII	CCWGG	2 cut(s)	824, 2247
EcoT14I	CCWWGG	2 cut(s)	1496, 2547
EcoT22I	ATGCAT	1 cut(s)	1567
EcoT38I	GRGCYC	2 cut(s)	707, 1594
ErhI	CCWWGG	2 cut(s)	1496, 2547
FauI	CCCGC	3 cut(s)	1569, 1799, 2049
FauNDI	CATATG	1 cut(s)	1267
FbaI	TGATCA	2 cut(s)	1527, 1708
Fnu4HI	GCNGC	9 cut(s)	54, 390, 411, 784, 849, 1574, 2337, 2598, 2601
FokI	GGATG	6 cut(s)	56, 1180, 1484, 1616, 1765, 2036
FriOI	GRGCYC	2 cut(s)	707, 1594
Fsp4HI	GCNGC	9 cut(s)	54, 390, 411, 784, 849, 1574, 2337, 2598, 2601
FspBI	CTAG	8 cut(s)	839, 1164, 1317, 1952, 2243, 2414, 2462, 2577
GlaI	GCGC	2 cut(s)	1315, 1334
GluI	GCNGC	9 cut(s)	54, 390, 411, 784, 849, 1574, 2337, 2598, 2601
GsaI	CCCAGC	1 cut(s)	783
GsuI	CTGGAG	2 cut(s)	420, 640
HaeIII	GGCC	8 cut(s)	445, 603, 1505, 1580, 1910, 2177, 2253, 2516
HapII	CCGG	4 cut(s)	79, 1278, 1343, 2427
HgaI	GACGC	3 cut(s)	383, 522, 1271
HhaI	GCGC	2 cut(s)	1316, 1335
Hin1I	GRCGYC	1 cut(s)	2561
Hin6I	GCGC	2 cut(s)	1314, 1333
HinP1I	GCGC	2 cut(s)	1314, 1333
HincII	GTYRAC	2 cut(s)	186, 1288
HindII	GTYRAC	2 cut(s)	186, 1288
HindIII	AAGCTT	1 cut(s)	2069
HpaII	CCGG	4 cut(s)	79, 1278, 1343, 2427
Hpy166II	GTNNAC	6 cut(s)	186, 261, 1288, 1411, 1621, 2209
Hpy188I	TCNGA	9 cut(s)	40, 90, 745, 1614, 1747, 1819, 2140, 2164, 2452
Hpy8I	GTNNAC	6 cut(s)	186, 261, 1288, 1411, 1621, 2209
HpyCH4III	ACNGT	2 cut(s)	2111, 2283
HpyCH4IV	ACGT	4 cut(s)	430, 1358, 1832, 2561
HpyCH4V	TGCA	8 cut(s)	151, 314, 1355, 1565, 2049, 2184, 2348, 2555
HpyF10VI	GCNNNNNNNGC	3 cut(s)	395, 735, 2345
HpySE526I	ACGT	4 cut(s)	430, 1358, 1832, 2561
Hsp92I	GRCGYC	1 cut(s)	2561
HspAI	GCGC	2 cut(s)	1314, 1333
Ksp22I	TGATCA	2 cut(s)	1527, 1708
Kzo9I	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
LguI	GCTCTTC	1 cut(s)	1477
LmnI	GCTCC	2 cut(s)	2398, 2506
Lsp1109I	GCAGC	6 cut(s)	401, 795, 1560, 2348, 2584, 2587
LweI	GCATC	7 cut(s)	925, 1200, 1462, 1574, 1597, 2144, 2488
MaeI	CTAG	8 cut(s)	839, 1164, 1317, 1952, 2243, 2414, 2462, 2577
MaeII	ACGT	4 cut(s)	430, 1358, 1832, 2561
MalI	GATC	9 cut(s)	69, 180, 214, 449, 1341, 1529, 1710, 2199, 2217
MbiI	CCGCTC	1 cut(s)	2056
MboI	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
MboII	GAAGA	8 cut(s)	32, 148, 379, 741, 820, 1219, 1494, 1750
MfeI	CAATTG	1 cut(s)	2185
MflI	RGATCY	2 cut(s)	67, 178
MhlI	GDGCHC	3 cut(s)	95, 707, 1594
MluI	ACGCGT	1 cut(s)	375
MlyI	GAGTC	5 cut(s)	41, 755, 863, 2486, 2582
MmeI	TCCRAC	4 cut(s)	1449, 1748, 2318, 2550
Mph1103I	ATGCAT	1 cut(s)	1567
MroXI	GAANNNNTTC	1 cut(s)	1029
MslI	CAYNNNNRTG	1 cut(s)	98
MspA1I	CMGCKG	1 cut(s)	1003
MspCI	CTTAAG	1 cut(s)	326
MspI	CCGG	4 cut(s)	79, 1278, 1343, 2427
MspR9I	CCNGG	2 cut(s)	826, 2249
MssI	GTTTAAAC	1 cut(s)	1012
MunI	CAATTG	1 cut(s)	2185
MvaI	CCWGG	2 cut(s)	826, 2249
MvnI	CGCG	2 cut(s)	377, 1314
MwoI	GCNNNNNNNGC	3 cut(s)	395, 735, 2345
NdeI	CATATG	1 cut(s)	1267
NdeII	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
NlaIV	GGNNCC	3 cut(s)	145, 2161, 2517
NmuCI	GTSAC	8 cut(s)	580, 914, 1042, 1345, 1555, 2478, 2557, 2583
NsiI	ATGCAT	1 cut(s)	1567
NspI	RCATGY	2 cut(s)	396, 2357
PceI	AGGCCT	1 cut(s)	2177
PciI	ACATGT	1 cut(s)	2353
PciSI	GCTCTTC	1 cut(s)	1477
PdmI	GAANNNNTTC	1 cut(s)	1029
PfeI	GAWTC	5 cut(s)	61, 126, 821, 1369, 2387
PkrI	GCNGC	9 cut(s)	55, 391, 412, 785, 850, 1575, 2338, 2599, 2602
PleI	GAGTC	5 cut(s)	40, 754, 862, 2485, 2581
PmeI	GTTTAAAC	1 cut(s)	1012
PpsI	GAGTC	5 cut(s)	40, 754, 862, 2485, 2581
PscI	ACATGT	1 cut(s)	2353
PshBI	ATTAAT	2 cut(s)	2364, 2421
PsiI	TTATAA	2 cut(s)	426, 1458
Psp124BI	GAGCTC	1 cut(s)	1594
Psp1406I	AACGTT	1 cut(s)	1358
Psp6I	CCWGG	2 cut(s)	824, 2247
PspEI	GGTNACC	3 cut(s)	5, 1555, 2583
PspFI	CCCAGC	1 cut(s)	779
PspGI	CCWGG	2 cut(s)	824, 2247
PspN4I	GGNNCC	3 cut(s)	145, 2161, 2517
PspPI	GGNCC	6 cut(s)	144, 443, 471, 1578, 2251, 2515
PsuI	RGATCY	2 cut(s)	67, 178
RsaI	GTAC	3 cut(s)	995, 1622, 1918
RsaNI	GTAC	3 cut(s)	994, 1621, 1917
RseI	CAYNNNNRTG	1 cut(s)	98
SacI	GAGCTC	1 cut(s)	1594
SapI	GCTCTTC	1 cut(s)	1477
SatI	GCNGC	9 cut(s)	54, 390, 411, 784, 849, 1574, 2337, 2598, 2601
Sau3AI	GATC	9 cut(s)	67, 178, 212, 447, 1339, 1527, 1708, 2197, 2215
Sau96I	GGNCC	6 cut(s)	144, 443, 471, 1578, 2251, 2515
ScaI	AGTACT	1 cut(s)	995
SchI	GAGTC	5 cut(s)	41, 755, 863, 2486, 2582
ScrFI	CCNGG	2 cut(s)	826, 2249
SduI	GDGCHC	3 cut(s)	95, 707, 1594
SfaNI	GCATC	7 cut(s)	925, 1200, 1462, 1574, 1597, 2144, 2488
SfcI	CTRYAG	1 cut(s)	1801
SinI	GGWCC	2 cut(s)	144, 471
SmiMI	CAYNNNNRTG	1 cut(s)	98
SmlI	CTYRAG	5 cut(s)	326, 989, 1109, 2261, 2315
SmoI	CTYRAG	5 cut(s)	326, 989, 1109, 2261, 2315
SseBI	AGGCCT	1 cut(s)	2177
SsiI	CCGC	8 cut(s)	53, 410, 848, 1003, 1312, 1576, 1806, 2056
SspI	AATATT	1 cut(s)	2447
SspMI	CTAG	8 cut(s)	839, 1164, 1317, 1952, 2243, 2414, 2462, 2577
SstI	GAGCTC	1 cut(s)	1594
StuI	AGGCCT	1 cut(s)	2177
StyD4I	CCNGG	2 cut(s)	824, 2247
StyI	CCWWGG	2 cut(s)	1496, 2547
TaaI	ACNGT	2 cut(s)	2111, 2283
TaiI	ACGT	4 cut(s)	433, 1361, 1835, 2564
TaqI	TCGA	4 cut(s)	211, 1145, 2214, 2475
TatI	WGTACW	2 cut(s)	993, 1620
TauI	GCSGC	3 cut(s)	56, 413, 851
TfiI	GAWTC	5 cut(s)	61, 126, 821, 1369, 2387
TscAI	CASTG	4 cut(s)	125, 1711, 2306, 2562
TseFI	GTSAC	8 cut(s)	580, 914, 1042, 1345, 1555, 2478, 2557, 2583
TseI	GCWGC	6 cut(s)	389, 783, 1573, 2336, 2597, 2600
Tsp45I	GTSAC	8 cut(s)	580, 914, 1042, 1345, 1555, 2478, 2557, 2583
TspDTI	ATGAA	5 cut(s)	1436, 1646, 1751, 1767, 2040
TspGWI	ACGGA	1 cut(s)	2493
TspRI	CASTG	4 cut(s)	125, 1711, 2306, 2562
Vha464I	CTTAAG	1 cut(s)	326
VpaK11BI	GGWCC	2 cut(s)	144, 471
VspI	ATTAAT	2 cut(s)	2364, 2421
XagI	CCTNNNNNAGG	1 cut(s)	2412
XapI	RAATTY	3 cut(s)	253, 660, 1512
XbaI	TCTAGA	2 cut(s)	2242, 2576
XceI	RCATGY	2 cut(s)	396, 2357
XcmI	CCANNNNNNNNNTGG	1 cut(s)	166
XmnI	GAANNNNTTC	1 cut(s)	1029
XspI	CTAG	8 cut(s)	839, 1164, 1317, 1952, 2243, 2414, 2462, 2577
ZraI	GACGTC	1 cut(s)	2562
ZrmI	AGTACT	1 cut(s)	995
Zsp2I	ATGCAT	1 cut(s)	1567

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.