Pentatricopeptide repeat-containing protein At4g16390
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| PPR_2 | PF13041 | 8 - 45 | 3.4e-06 | PPR repeat family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 419 |
| AcuI | CTGAAG | 1 cut(s) | 404 |
| AfaI | GTAC | 1 cut(s) | 59 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 115 |
| AgsI | TTSAA | 2 cut(s) | 100, 283 |
| AluBI | AGCT | 3 cut(s) | 11, 196, 397 |
| AluI | AGCT | 3 cut(s) | 11, 196, 397 |
| Alw26I | GTCTC | 1 cut(s) | 155 |
| AlwI | GGATC | 1 cut(s) | 419 |
| BcoDI | GTCTC | 1 cut(s) | 155 |
| BfaI | CTAG | 5 cut(s) | 110, 230, 251, 401, 457 |
| BmiI | GGNNCC | 1 cut(s) | 21 |
| BmsI | GCATC | 1 cut(s) | 302 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 115 |
| BseGI | GGATG | 1 cut(s) | 48 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BsmAI | GTCTC | 1 cut(s) | 155 |
| Bsp143I | GATC | 2 cut(s) | 355, 411 |
| BspLI | GGNNCC | 1 cut(s) | 21 |
| BspPI | GGATC | 1 cut(s) | 419 |
| BssMI | GATC | 2 cut(s) | 355, 411 |
| Bst4CI | ACNGT | 2 cut(s) | 62, 441 |
| BstC8I | GCNNGC | 1 cut(s) | 194 |
| BstDEI | CTNAG | 1 cut(s) | 450 |
| BstF5I | GGATG | 1 cut(s) | 48 |
| BstKTI | GATC | 2 cut(s) | 358, 414 |
| BstMAI | GTCTC | 1 cut(s) | 155 |
| BstMBI | GATC | 2 cut(s) | 355, 411 |
| BtsCI | GGATG | 1 cut(s) | 48 |
| BtsIMutI | CAGTG | 1 cut(s) | 75 |
| Cac8I | GCNNGC | 1 cut(s) | 194 |
| Csp6I | GTAC | 1 cut(s) | 58 |
| CviJI | RGCY | 8 cut(s) | 11, 22, 196, 218, 335, 389, 397, 435 |
| CviKI_1 | RGCY | 8 cut(s) | 11, 22, 196, 218, 335, 389, 397, 435 |
| CviQI | GTAC | 1 cut(s) | 58 |
| DdeI | CTNAG | 1 cut(s) | 450 |
| DpnI | GATC | 2 cut(s) | 357, 413 |
| DpnII | GATC | 2 cut(s) | 355, 411 |
| Eco57I | CTGAAG | 1 cut(s) | 404 |
| FaiI | YATR | 6 cut(s) | 122, 237, 326, 427, 429, 431 |
| FokI | GGATG | 1 cut(s) | 35 |
| FspBI | CTAG | 5 cut(s) | 110, 230, 251, 401, 457 |
| HindIII | AAGCTT | 1 cut(s) | 194 |
| HinfI | GANTC | 1 cut(s) | 166 |
| Hpy166II | GTNNAC | 1 cut(s) | 367 |
| Hpy188I | TCNGA | 3 cut(s) | 322, 423, 453 |
| Hpy188III | TCNNGA | 3 cut(s) | 91, 154, 283 |
| Hpy8I | GTNNAC | 1 cut(s) | 367 |
| HpyAV | CCTTC | 1 cut(s) | 325 |
| HpyCH4III | ACNGT | 2 cut(s) | 62, 441 |
| HpyCH4IV | ACGT | 1 cut(s) | 84 |
| HpyCH4V | TGCA | 3 cut(s) | 192, 207, 342 |
| HpyF3I | CTNAG | 1 cut(s) | 450 |
| HpySE526I | ACGT | 1 cut(s) | 84 |
| Kzo9I | GATC | 2 cut(s) | 355, 411 |
| LmnI | GCTCC | 1 cut(s) | 19 |
| LpnPI | CCDG | 5 cut(s) | 141, 167, 248, 362, 403 |
| LweI | GCATC | 1 cut(s) | 302 |
| MaeI | CTAG | 5 cut(s) | 110, 230, 251, 401, 457 |
| MaeII | ACGT | 1 cut(s) | 84 |
| MalI | GATC | 2 cut(s) | 357, 413 |
| MboI | GATC | 2 cut(s) | 355, 411 |
| MboII | GAAGA | 1 cut(s) | 194 |
| MfeI | CAATTG | 1 cut(s) | 343 |
| MluCI | AATT | 3 cut(s) | 113, 202, 343 |
| MlyI | GAGTC | 1 cut(s) | 160 |
| MnlI | CCTC | 2 cut(s) | 207, 380 |
| MseI | TTAA | 1 cut(s) | 306 |
| MunI | CAATTG | 1 cut(s) | 343 |
| NdeII | GATC | 2 cut(s) | 355, 411 |
| NlaIV | GGNNCC | 1 cut(s) | 21 |
| PflFI | GACNNNGTC | 1 cut(s) | 86 |
| PleI | GAGTC | 1 cut(s) | 160 |
| PpsI | GAGTC | 1 cut(s) | 160 |
| PspN4I | GGNNCC | 1 cut(s) | 21 |
| PsyI | GACNNNGTC | 1 cut(s) | 86 |
| RsaI | GTAC | 1 cut(s) | 59 |
| RsaNI | GTAC | 1 cut(s) | 58 |
| SaqAI | TTAA | 1 cut(s) | 306 |
| Sau3AI | GATC | 2 cut(s) | 355, 411 |
| SchI | GAGTC | 1 cut(s) | 160 |
| SetI | ASST | 6 cut(s) | 13, 87, 198, 372, 399, 458 |
| SfaNI | GCATC | 1 cut(s) | 302 |
| Sse9I | AATT | 3 cut(s) | 113, 202, 343 |
| SspMI | CTAG | 5 cut(s) | 110, 230, 251, 401, 457 |
| TaaI | ACNGT | 2 cut(s) | 62, 441 |
| TaiI | ACGT | 1 cut(s) | 87 |
| TaqI | TCGA | 1 cut(s) | 311 |
| TasI | AATT | 3 cut(s) | 113, 202, 343 |
| Tru1I | TTAA | 1 cut(s) | 306 |
| Tru9I | TTAA | 1 cut(s) | 306 |
| TscAI | CASTG | 1 cut(s) | 82 |
| TspDTI | ATGAA | 2 cut(s) | 147, 237 |
| TspRI | CASTG | 1 cut(s) | 82 |
| Tth111I | GACNNNGTC | 1 cut(s) | 86 |
| XspI | CTAG | 5 cut(s) | 110, 230, 251, 401, 457 |