Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0001673

Physical Location & Seq

Genomic Coordinates Reverse (-)

57724014 .. 57727823

Gene Structure 3810 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004254

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGATGACCATATATTCCTGTAGTGGGAAAGTCTCAGAGGCAAAGAGAACGTTGAATGAGATGATGGAAGCTGGTTTCCAGCTTAATATCCTTATTTTGATATCACTAATACAATTCTATGGGAAGGCCAAGCGTACTGATGATGTTGTCGAGGCATTCAATCAACTACAACAATTAGGCATAACTCCAGATGAGCATTTATGTGGTTATCTCCTGAATATGATGACTCAAACACCAAAGGGTGAACTACCTGAGTTGACTGATTGCATTGAGCGTGGTAATGAGAAGCTTGGATATGTTGTAAGAACTCTGGTAGAGAAGCAAGACAGTAGTCAAAACTTCAGGAAGGAAGCATCAGAACTTTTTAATTCAGTTGGTTCCTATATGAAGGCCTACTACAATTGCTTTATTGGTCTTCATGTGAACCTCCAGCTCTTGAAGAGAGCTTGTGAGTTTCTAAACCTGGGGCTTACACTTGAGATATACACAGATATACAATCAAAGTACCCAACCCAGTGGTCTCTGTATCTCAAGGTTCTCTCTGTTAGGGCAGTTTTTACTGCATTACATGTTTGGATTAATGACTTGTCTCGTTCTTTGGAATCTGGGGAGGAGCTGCCGATTCTTGATTCGAAACCATTGAATTGCCGTTATGATGCACAGATTTCAGTTTTTAGGTCCAAGCCACAGCAGAAACTGGGTGATGCCAAAGTATTCATGATTGGGTCTGGTACACTCGAATGTGAGTTATTGAAACATGTTACCCTGATGGGAGCTTCATGTGGCAACCAGGGGAAGCGAGCAATCATTGATGATGATGTAATTGAGAAGAGTAACCTTAGTAAGCAGATCCTCTTCCGTGATTGGAACATTGGGTGGGCAAAGTCTACAGTTGCCGCTTCTACTGCTGCATCAATAAATCCCAGTCCCCGTCTCGACATTGTAGCGTTGCATAATAGAGTTCGACCTGAAACTGAGAATGTGTTTGATGACACCATCTGGGGGAGTCCAAGTGTTGATCTTAATGCAGTACATAATGTCAATGGCAAGCTCTATGTTGGTCAGAGCACCAGCGGCACCTTCTTGATCGATCTCGACAAGAAAGACTACTCGAAGCCAAACGTCGAGATTGCACTGAAGCTTCCGAGGGATCCGAACCACCCATCTGTTGGTCTAGCCACTGTAGGTTCGTGCAACGGCCTCCCCTGGCTAGTTGATTTACATGCCTCTCAATATTATATATCAAATCCCATTACCGGGTTTTGTCCCGTCAGCCGTGTCTATAAAGTACTGTGCACCTTTCCAATAAAAGGTTCTAGTGATGAAGAGGAGGCAATGGTTTTGACAGTTGGCTGCGGAAGTTGGAGAAGCATTGGGCATTATAAAGGCACGGCTGCTGGGAAAACACAAAAGCGTATGATTTATTTGAATGGATCCCTTCACTGGATAAATGGTTATGGAAACAGGACTATTTCGATATGTGCCTTTGATGTTGAGAGAGAGGTGTTCCAACAATTACCATCTTTTACAGTGGGAGCTCCCTATTTGTGGGATTGTGATCTTGGAGTTTTGAGAGGTTGCCTTTCCCTATTTGTTAACATAAGCACTTCGACTATTTATGGGGACATTAGTTTCTGGGTGATGAACGATTACGGTGTCAAGGAGTCTTGGACCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031425 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

560

Amino Acids

62.46

Weight (kDa)

6.39

Isoelectric Point (pI)

37.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ThiF	PF00899	218 - 352	1.4e-19	ThiF family
FBA_3	PF08268	411 - 559	2.5e-12	F-box associated beta propeller domain
FBA_1	PF07734	426 - 559	1.9e-06	F-box associated beta propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16390
fragaria_vesca	FvH4_3g00440 FvH4_3g00470
malus_domestica	MD00G1221000.v1.1 MD05G1360400.v1.1 MD08G1234300.v1.1 MD10G1337400.v1.1 MD10G1337800.v1.1 MD10G1338000.v1.1
prunus_persica	Prupe.3G138500_v2.0.a1 Prupe.4G005200_v2.0.a1
pyrus_communis	pycom05g32720 pycom10g28680 pycom10g28700 pycom10g28720 pycom10g28750
rosa_chinensis	RchiOBHm_Chr1g0364151 RchiOBHm_Chr2g0155431 RchiOBHm_Chr4g0402181 RchiOBHm_Chr5g0000631 RchiOBHm_Chr6g0271321
rosa_laevigata	RLG00000004254 RLG00000013858 RLG00000028931 RLG00000030883
rosa_multiflora	Rmu_co8004710.1_g000001 Rmu_co8021096.1_g000001 Rmu_co8161794.1_g000001 Rmu_sc0000795.1_g000110 Rmu_sc0001141.1_g000016 Rmu_sc0003662.1_g000007 Rmu_sc0003699.1_g000009 Rmu_sc0006695.1_g000081 Rmu_sc0010255.1_g000007 Rmu_sc0011992.1_g000014 Rmu_sc0016929.1_g000002 Rmu_sc0017523.1_g000008 Rmu_sc0021532.1_g000001 Rmu_sc0029877.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001310 Rroxscaffold_1G00075570 Rroxscaffold_4G00324290
rosa_rugosa	Rorug04G0385500 Rorug07G0309300.1
rosa_samantha	Rh5AG005400 Rh5BG007000 Rh5CG005700 Rh5DG005600
rosa_wichuraiana	Rw5G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1383
AccB1I	GGYRCC	1 cut(s)	1076
AccB7I	CCANNNNNTGG	1 cut(s)	1169
AccI	GTMKAC	1 cut(s)	887
AciI	CCGC	3 cut(s)	897, 1074, 1356
AclI	AACGTT	1 cut(s)	50
AclWI	GGATC	5 cut(s)	844, 1145, 1158, 1428, 1441
AcuI	CTGAAG	2 cut(s)	325, 1157
AfaI	GTAC	5 cut(s)	136, 506, 733, 1032, 1290
AfiI	CCNNNNNNNGG	8 cut(s)	24, 1002, 1169, 1256, 1257, 1310, 1443, 1548
AflIII	ACRYGT	2 cut(s)	568, 757
AgsI	TTSAA	6 cut(s)	55, 160, 439, 643, 754, 1429
AjnI	CCWGG	3 cut(s)	462, 789, 1205
AjuI	GAANNNNNNNTTGG	2 cut(s)	1297, 1329
Alw21I	GWGCWC	3 cut(s)	1070, 1298, 1540
Alw26I	GTCTC	4 cut(s)	37, 525, 594, 938
Alw44I	GTGCAC	1 cut(s)	1294
AlwI	GGATC	5 cut(s)	844, 1145, 1158, 1428, 1441
AlwNI	CAGNNNCTG	1 cut(s)	697
AoxI	GGCC	3 cut(s)	126, 390, 1198
ApaLI	GTGCAC	1 cut(s)	1294
ApeKI	GCWGC	4 cut(s)	616, 908, 1353, 1394
AseI	ATTAAT	1 cut(s)	579
AspS9I	GGNCC	2 cut(s)	678, 1671
AsuC2I	CCSGG	1 cut(s)	1258
AsuHPI	GGTGA	3 cut(s)	254, 713, 1651
AsuII	TTCGAA	1 cut(s)	632
AvaII	GGWCC	2 cut(s)	678, 1671
BaeGI	GKGCMC	1 cut(s)	1298
BamHI	GGATCC	2 cut(s)	1150, 1433
BanI	GGYRCC	1 cut(s)	1076
BanII	GRGCYC	1 cut(s)	1540
BarI	GAAGNNNNNNTAC	2 cut(s)	380, 412
BbsI	GAAGAC	1 cut(s)	407
Bbv12I	GWGCWC	3 cut(s)	1070, 1298, 1540
BbvI	GCAGC	4 cut(s)	603, 895, 1340, 1381
BccI	CCATC	5 cut(s)	58, 763, 1004, 1171, 1528
BceAI	ACGGC	4 cut(s)	633, 1213, 1260, 1407
BciT130I	CCWGG	3 cut(s)	464, 791, 1207
BcnI	CCSGG	1 cut(s)	1258
BcoDI	GTCTC	4 cut(s)	37, 525, 594, 938
BfaI	CTAG	3 cut(s)	1175, 1211, 1317
BfmI	CTRYAG	3 cut(s)	19, 888, 1182
BisI	GCNGC	6 cut(s)	617, 897, 909, 1075, 1354, 1395
BlsI	GCNGC	6 cut(s)	618, 898, 910, 1076, 1355, 1396
BmcAI	AGTACT	1 cut(s)	1290
Bme1390I	CCNGG	4 cut(s)	464, 791, 1207, 1258
Bme18I	GGWCC	2 cut(s)	678, 1671
BmgT120I	GGNCC	2 cut(s)	678, 1671
BmiI	GGNNCC	4 cut(s)	379, 1078, 1152, 1435
BmrFI	CCNGG	4 cut(s)	464, 791, 1207, 1258
BmrI	ACTGGG	3 cut(s)	508, 707, 918
BmsI	GCATC	4 cut(s)	362, 646, 694, 920
BmuI	ACTGGG	3 cut(s)	508, 707, 918
BoxI	GACNNNNGTC	1 cut(s)	330
BpiI	GAAGAC	1 cut(s)	407
BpmI	CTGGAG	2 cut(s)	171, 413
Bpu14I	TTCGAA	1 cut(s)	632
BpuEI	CTTGAG	2 cut(s)	497, 515
BpuMI	CCSGG	1 cut(s)	1258
Bsa29I	ATCGAT	1 cut(s)	1089
BsaBI	GATNNNNATC	1 cut(s)	1557
BsaI	GGTCTC	1 cut(s)	525
BsaJI	CCNNGG	4 cut(s)	463, 790, 1145, 1205
BsaXI	ACNNNNNCTCC	2 cut(s)	997, 1027
Bsc4I	CCNNNNNNNGG	8 cut(s)	24, 1002, 1169, 1256, 1257, 1310, 1443, 1548
Bse1I	ACTGG	4 cut(s)	514, 702, 924, 1448
Bse3DI	GCAATG	1 cut(s)	1341
Bse8I	GATNNNNATC	1 cut(s)	1557
BseBI	CCWGG	3 cut(s)	464, 791, 1207
BseCI	ATCGAT	1 cut(s)	1089
BseDI	CCNNGG	4 cut(s)	463, 790, 1145, 1205
BseJI	GATNNNNATC	1 cut(s)	1557
BseLI	CCNNNNNNNGG	8 cut(s)	24, 1002, 1169, 1256, 1257, 1310, 1443, 1548
BseMI	GCAATG	1 cut(s)	1341
BseMII	CTCAG	3 cut(s)	48, 243, 966
BseNI	ACTGG	4 cut(s)	514, 702, 924, 1448
BseRI	GAGGAG	2 cut(s)	626, 1343
BseSI	GKGCMC	1 cut(s)	1298
BseXI	GCAGC	4 cut(s)	603, 895, 1340, 1381
BseYI	CCCAGC	1 cut(s)	1397
BshFI	GGCC	3 cut(s)	128, 392, 1200
BshNI	GGYRCC	1 cut(s)	1076
BshVI	ATCGAT	1 cut(s)	1089
BsiHKAI	GWGCWC	3 cut(s)	1070, 1298, 1540
BsiSI	CCGG	1 cut(s)	1257
BslFI	GGGAC	3 cut(s)	912, 1251, 1637
BslI	CCNNNNNNNGG	8 cut(s)	24, 1002, 1169, 1256, 1257, 1310, 1443, 1548
BsmAI	GTCTC	4 cut(s)	37, 525, 594, 938
BsmBI	CGTCTC	1 cut(s)	938
BsmFI	GGGAC	3 cut(s)	912, 1251, 1637
BsmI	GAATGC	1 cut(s)	155
BsnI	GGCC	3 cut(s)	128, 392, 1200
Bso31I	GGTCTC	1 cut(s)	525
Bsp119I	TTCGAA	1 cut(s)	632
Bsp1286I	GDGCHC	3 cut(s)	1070, 1298, 1540
Bsp143I	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
BspACI	CCGC	3 cut(s)	897, 1074, 1356
BspANI	GGCC	3 cut(s)	128, 392, 1200
BspCNI	CTCAG	3 cut(s)	47, 244, 967
BspDI	ATCGAT	1 cut(s)	1089
BspHI	TCATGA	1 cut(s)	717
BspLI	GGNNCC	4 cut(s)	379, 1078, 1152, 1435
BspPI	GGATC	5 cut(s)	844, 1145, 1158, 1428, 1441
BspT104I	TTCGAA	1 cut(s)	632
BspT107I	GGYRCC	1 cut(s)	1076
BspTNI	GGTCTC	1 cut(s)	525
BsrDI	GCAATG	1 cut(s)	1341
BsrI	ACTGG	4 cut(s)	514, 702, 924, 1448
BssECI	CCNNGG	4 cut(s)	463, 790, 1145, 1205
BssMI	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
Bst2UI	CCWGG	3 cut(s)	464, 791, 1207
Bst4CI	ACNGT	7 cut(s)	329, 892, 1183, 1293, 1348, 1531, 1655
Bst6I	CTCTTC	4 cut(s)	434, 824, 860, 1320
BstBI	TTCGAA	1 cut(s)	632
BstC8I	GCNNGC	2 cut(s)	801, 1049
BstDEI	CTNAG	4 cut(s)	34, 252, 839, 975
BstKTI	GATC	7 cut(s)	852, 1021, 1089, 1093, 1153, 1436, 1561
BstMAI	GTCTC	4 cut(s)	37, 525, 594, 938
BstMBI	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
BstMWI	GCNNNNNNNGC	2 cut(s)	905, 1074
BstNI	CCWGG	3 cut(s)	464, 791, 1207
BstNSI	RCATGY	3 cut(s)	572, 761, 1226
BstPAI	GACNNNNGTC	1 cut(s)	330
BstSCI	CCNGG	4 cut(s)	462, 789, 1205, 1256
BstSFI	CTRYAG	3 cut(s)	19, 888, 1182
BstSLI	GKGCMC	1 cut(s)	1298
BstV1I	GCAGC	4 cut(s)	603, 895, 1340, 1381
BstV2I	GAAGAC	1 cut(s)	407
BstX2I	RGATCY	3 cut(s)	849, 1150, 1433
BstXI	CCANNNNNNTGG	1 cut(s)	516
BstYI	RGATCY	3 cut(s)	849, 1150, 1433
Bsu15I	ATCGAT	1 cut(s)	1089
BsuRI	GGCC	3 cut(s)	128, 392, 1200
BsuTUI	ATCGAT	1 cut(s)	1089
BtsIMutI	CAGTG	5 cut(s)	521, 1133, 1179, 1441, 1536
Cac8I	GCNNGC	2 cut(s)	801, 1049
CaiI	CAGNNNCTG	1 cut(s)	697
CciI	TCATGA	1 cut(s)	717
Cfr13I	GGNCC	2 cut(s)	678, 1671
ClaI	ATCGAT	1 cut(s)	1089
Csp6I	GTAC	5 cut(s)	135, 505, 732, 1031, 1289
CviAII	CATG	6 cut(s)	419, 569, 718, 758, 780, 1223
CviQI	GTAC	5 cut(s)	135, 505, 732, 1031, 1289
DdeI	CTNAG	4 cut(s)	34, 252, 839, 975
DpnI	GATC	7 cut(s)	851, 1020, 1088, 1092, 1152, 1435, 1560
DpnII	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
Eam1104I	CTCTTC	4 cut(s)	434, 824, 860, 1320
EarI	CTCTTC	4 cut(s)	434, 824, 860, 1320
Ecl136II	GAGCTC	1 cut(s)	1538
Eco147I	AGGCCT	1 cut(s)	392
Eco24I	GRGCYC	1 cut(s)	1540
Eco31I	GGTCTC	1 cut(s)	525
Eco32I	GATATC	1 cut(s)	102
Eco47I	GGWCC	2 cut(s)	678, 1671
Eco53kI	GAGCTC	1 cut(s)	1538
Eco57I	CTGAAG	2 cut(s)	325, 1157
EcoICRI	GAGCTC	1 cut(s)	1538
EcoRII	CCWGG	3 cut(s)	462, 789, 1205
EcoRV	GATATC	1 cut(s)	102
EcoT38I	GRGCYC	1 cut(s)	1540
Esp3I	CGTCTC	1 cut(s)	938
FaeI	CATG	6 cut(s)	422, 572, 721, 761, 783, 1226
FaqI	GGGAC	3 cut(s)	912, 1251, 1637
FatI	CATG	6 cut(s)	418, 568, 717, 757, 779, 1222
FblI	GTMKAC	1 cut(s)	887
Fnu4HI	GCNGC	6 cut(s)	617, 897, 909, 1075, 1354, 1395
FriOI	GRGCYC	1 cut(s)	1540
Fsp4HI	GCNGC	6 cut(s)	617, 897, 909, 1075, 1354, 1395
FspBI	CTAG	3 cut(s)	1175, 1211, 1317
GluI	GCNGC	6 cut(s)	617, 897, 909, 1075, 1354, 1395
GsaI	CCCAGC	1 cut(s)	1401
GsuI	CTGGAG	2 cut(s)	171, 413
HaeIII	GGCC	3 cut(s)	128, 392, 1200
HapII	CCGG	1 cut(s)	1257
Hin1II	CATG	6 cut(s)	422, 572, 721, 761, 783, 1226
HincII	GTYRAC	2 cut(s)	258, 1597
HindII	GTYRAC	2 cut(s)	258, 1597
HindIII	AAGCTT	2 cut(s)	287, 1139
HinfI	GANTC	6 cut(s)	226, 602, 622, 629, 1006, 1664
HpaI	GTTAAC	1 cut(s)	1597
HpaII	CCGG	1 cut(s)	1257
HphI	GGTGA	3 cut(s)	254, 713, 1651
Hpy166II	GTNNAC	7 cut(s)	245, 258, 424, 734, 888, 1296, 1597
Hpy188I	TCNGA	5 cut(s)	37, 358, 1065, 1146, 1155
Hpy8I	GTNNAC	7 cut(s)	245, 258, 424, 734, 888, 1296, 1597
Hpy99I	CGWCG	1 cut(s)	1127
HpyAV	CCTTC	5 cut(s)	118, 340, 382, 1090, 1448
HpyCH4III	ACNGT	7 cut(s)	329, 892, 1183, 1293, 1348, 1531, 1655
HpyCH4IV	ACGT	2 cut(s)	50, 1122
HpyCH4V	TGCA	9 cut(s)	267, 563, 659, 911, 952, 1028, 1133, 1194, 1296
HpyF10VI	GCNNNNNNNGC	2 cut(s)	905, 1074
HpyF3I	CTNAG	4 cut(s)	34, 252, 839, 975
HpySE526I	ACGT	2 cut(s)	50, 1122
Hsp92II	CATG	6 cut(s)	422, 572, 721, 761, 783, 1226
KspAI	GTTAAC	1 cut(s)	1597
Kzo9I	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
LmnI	GCTCC	4 cut(s)	613, 773, 1535, 1543
Lsp1109I	GCAGC	4 cut(s)	603, 895, 1340, 1381
LweI	GCATC	4 cut(s)	362, 646, 694, 920
MaeI	CTAG	3 cut(s)	1175, 1211, 1317
MaeII	ACGT	2 cut(s)	50, 1122
MaeIII	GTNAC	2 cut(s)	760, 833
MalI	GATC	7 cut(s)	851, 1020, 1088, 1092, 1152, 1435, 1560
MboI	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
MboII	GAAGA	5 cut(s)	407, 451, 841, 847, 1337
MfeI	CAATTG	1 cut(s)	400
MflI	RGATCY	3 cut(s)	849, 1150, 1433
MhlI	GDGCHC	3 cut(s)	1070, 1298, 1540
MluCI	AATT	7 cut(s)	113, 173, 367, 400, 643, 822, 1514
MlyI	GAGTC	3 cut(s)	220, 1015, 1673
MmeI	TCCRAC	2 cut(s)	1343, 1534
MseI	TTAA	5 cut(s)	84, 366, 579, 1023, 1596
MslI	CAYNNNNRTG	2 cut(s)	201, 739
MspA1I	CMGCKG	1 cut(s)	1074
MspI	CCGG	1 cut(s)	1257
MspR9I	CCNGG	4 cut(s)	464, 791, 1207, 1258
MunI	CAATTG	1 cut(s)	400
Mva1269I	GAATGC	1 cut(s)	155
MvaI	CCWGG	3 cut(s)	464, 791, 1207
MwoI	GCNNNNNNNGC	2 cut(s)	905, 1074
NciI	CCSGG	1 cut(s)	1258
NdeII	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
NlaIII	CATG	6 cut(s)	422, 572, 721, 761, 783, 1226
NlaIV	GGNNCC	4 cut(s)	379, 1078, 1152, 1435
NspI	RCATGY	3 cut(s)	572, 761, 1226
NspV	TTCGAA	1 cut(s)	632
PagI	TCATGA	1 cut(s)	717
PceI	AGGCCT	1 cut(s)	392
PciI	ACATGT	2 cut(s)	568, 757
PctI	GAATGC	1 cut(s)	155
PfeI	GAWTC	3 cut(s)	602, 622, 629
PflMI	CCANNNNNTGG	1 cut(s)	1169
PkrI	GCNGC	6 cut(s)	618, 898, 910, 1076, 1355, 1396
PleI	GAGTC	3 cut(s)	220, 1014, 1672
PpsI	GAGTC	3 cut(s)	220, 1014, 1672
PscI	ACATGT	2 cut(s)	568, 757
PshAI	GACNNNNGTC	1 cut(s)	330
PshBI	ATTAAT	1 cut(s)	579
PsiI	TTATAA	1 cut(s)	1383
Psp124BI	GAGCTC	1 cut(s)	1540
Psp1406I	AACGTT	1 cut(s)	50
Psp6I	CCWGG	3 cut(s)	462, 789, 1205
PspFI	CCCAGC	1 cut(s)	1397
PspGI	CCWGG	3 cut(s)	462, 789, 1205
PspN4I	GGNNCC	4 cut(s)	379, 1078, 1152, 1435
PspPI	GGNCC	2 cut(s)	678, 1671
PstNI	CAGNNNCTG	1 cut(s)	697
PsuI	RGATCY	3 cut(s)	849, 1150, 1433
RsaI	GTAC	5 cut(s)	136, 506, 733, 1032, 1290
RsaNI	GTAC	5 cut(s)	135, 505, 732, 1031, 1289
RseI	CAYNNNNRTG	2 cut(s)	201, 739
SacI	GAGCTC	1 cut(s)	1540
SaqAI	TTAA	5 cut(s)	84, 366, 579, 1023, 1596
SatI	GCNGC	6 cut(s)	617, 897, 909, 1075, 1354, 1395
Sau3AI	GATC	7 cut(s)	849, 1018, 1086, 1090, 1150, 1433, 1558
Sau96I	GGNCC	2 cut(s)	678, 1671
ScaI	AGTACT	1 cut(s)	1290
SchI	GAGTC	3 cut(s)	220, 1015, 1673
ScrFI	CCNGG	4 cut(s)	464, 791, 1207, 1258
SduI	GDGCHC	3 cut(s)	1070, 1298, 1540
SfaNI	GCATC	4 cut(s)	362, 646, 694, 920
SfcI	CTRYAG	3 cut(s)	19, 888, 1182
SfuI	TTCGAA	1 cut(s)	632
SinI	GGWCC	2 cut(s)	678, 1671
SmiMI	CAYNNNNRTG	2 cut(s)	201, 739
SmlI	CTYRAG	2 cut(s)	476, 530
SmoI	CTYRAG	2 cut(s)	476, 530
Sse9I	AATT	7 cut(s)	113, 173, 367, 400, 643, 822, 1514
SseBI	AGGCCT	1 cut(s)	392
SsiI	CCGC	3 cut(s)	897, 1074, 1356
SspI	AATATT	1 cut(s)	1235
SspMI	CTAG	3 cut(s)	1175, 1211, 1317
SstI	GAGCTC	1 cut(s)	1540
StuI	AGGCCT	1 cut(s)	392
StyD4I	CCNGG	4 cut(s)	462, 789, 1205, 1256
TaaI	ACNGT	7 cut(s)	329, 892, 1183, 1293, 1348, 1531, 1655
TaiI	ACGT	2 cut(s)	53, 1125
TasI	AATT	7 cut(s)	113, 173, 367, 400, 643, 822, 1514
TatI	WGTACW	2 cut(s)	1030, 1288
TauI	GCSGC	2 cut(s)	899, 1077
TfiI	GAWTC	3 cut(s)	602, 622, 629
Tru1I	TTAA	5 cut(s)	84, 366, 579, 1023, 1596
Tru9I	TTAA	5 cut(s)	84, 366, 579, 1023, 1596
TscAI	CASTG	5 cut(s)	521, 1140, 1186, 1448, 1536
TseI	GCWGC	4 cut(s)	616, 908, 1353, 1394
TspDTI	ATGAA	6 cut(s)	401, 407, 706, 768, 1338, 1658
TspGWI	ACGGA	1 cut(s)	848
TspRI	CASTG	5 cut(s)	521, 1140, 1186, 1448, 1536
Van91I	CCANNNNNTGG	1 cut(s)	1169
VneI	GTGCAC	1 cut(s)	1294
VpaK11BI	GGWCC	2 cut(s)	678, 1671
VspI	ATTAAT	1 cut(s)	579
XceI	RCATGY	3 cut(s)	572, 761, 1226
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1166
XmiI	GTMKAC	1 cut(s)	887
XspI	CTAG	3 cut(s)	1175, 1211, 1317
ZrmI	AGTACT	1 cut(s)	1290

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.