Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0001673

Physical Location & Seq

Genomic Coordinates Reverse (-)

29180454 .. 29182643

Gene Structure 2190 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g28680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGCAAAGCAAAAGAAAAGCACCTTTCATAATCCCCCACAGGGTTAGGAAAATGGCTCATCACTTGTGCTCTTCACCCTCTTTTCTCTTCCGCAACCCCCAAACTTCCTCCCGCTCTCTCCCTTCTTCTTCTTCTTCTTCCCCGATTGATTTCCGACTCCGAAGCTCTGCAATTAACACCCACAGACTCAGTTTTCCTTCACTGCAATTTCAGTCAAGAACCTCTCTGCAAATACACCATGTTTCTTTGCAAGACCCAGTTGCAGAAGAAGCCCAGAACTCCAAAGCTCCAGAAATTGGAAATATTCAGAGCCCAGATGGAAATTCCAGGTCTTTGTCGAAAAGCTATATCTGGGTCAATCCCAGCAGCCCCAAAGCTTCACAGCTGCGGCACAAGTCCTACAATTCCAGGTACGCTTCTTTGGTGAAAGTAGCTGAGTATTTGAACTCTTGCACCCCGATTGAAAGTGATGTTTTCGAAGCTTTAAAAGGTTTAGGGGATAATATTTTGGAACAAGACGCTGTGGTGGTTCTGAATAACATGGACAATCCGGAAAATGCTTTGCTTGCGCTTAACTACTTTCAGCAGAGGTTGAAACCGAAGCGGGAGGTGATTTTGTATAATGTGACTTTGAAAGTGTGTAGGAAGGGTAAGGATATGGAGAGAGCGGAGAAGCTGTTCGACGAAATACTCCAGAGAGGTGTTAAACCCGATAATGTTACCTTTTCGACTATGATTAGTTGCTCTAGGATGTGTTCTTTGCCTGATAAGGCTGTGGAGTGGTTTGAGAAGATGCCCGGTTTTGGGTGTAATCCGGATGATGTTACCTATTCGGCTATGATTGACGCCTATGGACGTGCTGGTAAGGTTGAAATTGCTTTCAGTTTGTATGACCGGGCCAGGACTGAGAAGTGGCGCATTGATCGAGTGGCGTTTTCTACATTGATCAAAATTCGCGGGCAATCGGGGAATTTTGATGGGTGCTTGAATGTTTATGAGGAAATGAAAGCTATAGGGGCTAAGCCAAACTTGGTTATATATAACACTTTGTTGGATGCTATGGGAAGAGCTAGGAGGCCTTGGCAGGCCAAGAAAATTTACCGAGAGATGATCAGCAAGGAGCTTTCACCAAATTGGGTAACCTATGCAACTCTTTTAAGGGCCTATGGTAGAGCTCGCTACAGTGATGATGCTCTTAATGTTTATAAAGAGATGAAGGAAAAGGGACTGGAGTTAAATGTAATTCTCTATAACACCCTTTTAGCTATGTGTGCTGATGTTGGTTACACTGATGAAGCCGTTGAGATTTTTGAAGAAATGAAGAGTTCTGAAACACTGAAGCCTGACAGTTGGACCTTTTCGTCCATGATTACCATATATTCCTGTAGCGGGAAAGTCACAGAAGCAGAAGCAACATTGAATGAGATGTTGAAAGCTGGTTTTGAGCCAAATATCTTTATTTTGACATCACTCATCCAATGCTACGGTAAGGCAAAACGCACTGATGACGTTGTCAGGATATTCAATCAACTCCTAGAATTGGGTATAACACCAGATGAGCGTTTCTGTGGTTGTCTCCTGAATGTGATGACTCAAACACCAAAGGAAGAACTTTGCAAGCTTGCGAACTGCATTGAGAGGGCTGATGAAAAACTAGGGTATGTGGTAAGACTTTTGGTGGAAAAGCAAGACGGTAGTGAAAAGTTCAAGAACGAAGCATCACAACTTTTTAACTCGATTGGTTCGGATGTAAAGAAGGCTTACTGCAATTGCCTGATTGATCTTTCTGTGAACCTCAATCTCTTGGAGAGAGCCTGCGAGCTACTAGACTTGGGGATCACACTTCAGATATACATAGGCTTACAGTCAAGGTCTCAGACCCAATGGTCTTTGTATCTCAAGGGCCTCTCTCTTGGGGCAGCTCTGACTGCATTACATATTTGGATCAATGACCTGTCTCGGGTATTGGAATCTGGTGAGGAGCTTCCGCCGTTGCTTGGAATTAATACTGGACATGGGAAACATAAGTATTCAGATAAAGGTCTGGCGAGTGCATTTGAGTCGCATTTGAAGGAATTGAATGCTCCCTTCCATGAGGCCTCAGACAAGGCTGGCTGGTTTTTGACAACAAAGGTTGCAGTCAAGTCATGGTTAGAATCTAGAAGTTCATCTGAGTTAGTTACTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031425 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

730

Amino Acids

82.05

Weight (kDa)

8.38

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	204 - 247	6.1e-10	PPR repeat family
PPR_2	PF13041	255 - 284	4.4e-06	PPR repeat family
PPR_1	PF12854	269 - 299	2.1e-08	PPR repeat
TPR_24	PF23276	270 - 370	9.7e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	272 - 317	3.9e-07	PPR repeat family
PPR	PF01535	275 - 299	7.6e-06	PPR repeat
PPR_long	PF17177	293 - 388	6.5e-07	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	342 - 389	2.3e-11	PPR repeat family
PPR_3	PF13812	365 - 424	5.8e-12	Pentatricopeptide repeat domain
PPR_2	PF13041	380 - 414	2.3e-06	PPR repeat family
PPR	PF01535	380 - 410	1.4e-06	PPR repeat
PPR_long	PF17177	397 - 536	9.6e-14	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	404 - 460	2.8e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	408 - 441	6.8e-06	PPR repeat
PPR_2	PF13041	413 - 458	5.9e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0001673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16390
fragaria_vesca	FvH4_3g00440 FvH4_3g00470
malus_domestica	MD00G1221000.v1.1 MD05G1360400.v1.1 MD08G1234300.v1.1 MD10G1337400.v1.1 MD10G1337800.v1.1 MD10G1338000.v1.1
prunus_persica	Prupe.3G138500_v2.0.a1 Prupe.4G005200_v2.0.a1
pyrus_communis	pycom05g32720 pycom10g28680 pycom10g28700 pycom10g28720 pycom10g28750
rosa_chinensis	RchiOBHm_Chr1g0364151 RchiOBHm_Chr2g0155431 RchiOBHm_Chr4g0402181 RchiOBHm_Chr5g0000631 RchiOBHm_Chr6g0271321
rosa_laevigata	RLG00000004254 RLG00000013858 RLG00000028931 RLG00000030883
rosa_multiflora	Rmu_co8004710.1_g000001 Rmu_co8021096.1_g000001 Rmu_co8161794.1_g000001 Rmu_sc0000795.1_g000110 Rmu_sc0001141.1_g000016 Rmu_sc0003662.1_g000007 Rmu_sc0003699.1_g000009 Rmu_sc0006695.1_g000081 Rmu_sc0010255.1_g000007 Rmu_sc0011992.1_g000014 Rmu_sc0016929.1_g000002 Rmu_sc0017523.1_g000008 Rmu_sc0021532.1_g000001 Rmu_sc0029877.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001310 Rroxscaffold_1G00075570 Rroxscaffold_4G00324290
rosa_rugosa	Rorug04G0385500 Rorug07G0309300.1
rosa_samantha	Rh5AG005400 Rh5BG007000 Rh5CG005700 Rh5DG005600
rosa_wichuraiana	Rw5G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1206
AasI	GACNNNNNNGTC	2 cut(s)	1360, 1885
AccB7I	CCANNNNNTGG	1 cut(s)	296
AccBSI	CCGCTC	2 cut(s)	114, 668
AccII	CGCG	1 cut(s)	957
AccIII	TCCGGA	2 cut(s)	550, 814
AciI	CCGC	8 cut(s)	91, 112, 388, 604, 668, 957, 1389, 1988
AclWI	GGATC	2 cut(s)	1844, 1952
AcsI	RAATTY	4 cut(s)	322, 951, 970, 1095
AcuI	CTGAAG	2 cut(s)	1358, 1829
AcyI	GRCGYC	1 cut(s)	846
AfaI	GTAC	1 cut(s)	413
AfiI	CCNNNNNNNGG	8 cut(s)	40, 296, 803, 804, 1389, 1540, 1960, 1997
AjiI	CACGTC	1 cut(s)	857
AjnI	CCWGG	3 cut(s)	326, 407, 899
AloI	GAACNNNNNNTCC	2 cut(s)	662, 694
Alw21I	GWGCWC	2 cut(s)	71, 1177
Alw26I	GTCTC	3 cut(s)	1580, 1878, 1962
AlwI	GGATC	2 cut(s)	1844, 1952
Ama87I	CYCGRG	1 cut(s)	1959
Aor13HI	TCCGGA	2 cut(s)	550, 814
AoxI	GGCC	6 cut(s)	897, 1076, 1086, 1161, 1903, 2097
ApeKI	GCWGC	3 cut(s)	366, 385, 1919
ApoI	RAATTY	4 cut(s)	322, 951, 970, 1095
AseI	ATTAAT	1 cut(s)	2004
Asp700I	GAANNNNTTC	1 cut(s)	677
AspLEI	GCGC	2 cut(s)	571, 918
AspS9I	GGNCC	4 cut(s)	897, 1161, 1353, 1903
AsuC2I	CCSGG	2 cut(s)	798, 896
AsuHPI	GGTGA	5 cut(s)	66, 436, 622, 1119, 1988
AsuII	TTCGAA	1 cut(s)	477
AvaI	CYCGRG	1 cut(s)	1959
AvaII	GGWCC	1 cut(s)	1353
BanII	GRGCYC	2 cut(s)	314, 1177
Bbv12I	GWGCWC	2 cut(s)	71, 1177
BbvI	GCAGC	3 cut(s)	372, 378, 1931
BccI	CCATC	2 cut(s)	311, 971
BceAI	ACGGC	2 cut(s)	1283, 1975
BcgI	CGANNNNNNTGC	2 cut(s)	2043, 2077
BciT130I	CCWGG	3 cut(s)	328, 409, 901
BclI	TGATCA	2 cut(s)	945, 1110
BcnI	CCSGG	2 cut(s)	798, 896
BcoDI	GTCTC	3 cut(s)	1580, 1878, 1962
BfaI	CTAG	6 cut(s)	747, 1071, 1535, 1655, 1826, 2160
BfmI	CTRYAG	3 cut(s)	1011, 1180, 1384
BisI	GCNGC	4 cut(s)	367, 386, 389, 1920
BlpI	GCTNAGC	1 cut(s)	1020
BlsI	GCNGC	4 cut(s)	368, 387, 390, 1921
Bme1390I	CCNGG	5 cut(s)	328, 409, 798, 896, 901
Bme18I	GGWCC	1 cut(s)	1353
BmeT110I	CYCGRG	1 cut(s)	1959
BmgBI	CACGTC	1 cut(s)	857
BmgT120I	GGNCC	4 cut(s)	897, 1161, 1353, 1903
BmrFI	CCNGG	5 cut(s)	328, 409, 798, 896, 901
BmrI	ACTGGG	1 cut(s)	251
BmsI	GCATC	4 cut(s)	783, 1045, 1180, 1727
BmuI	ACTGGG	1 cut(s)	251
BpmI	CTGGAG	3 cut(s)	273, 677, 1250
Bpu1102I	GCTNAGC	1 cut(s)	1020
Bpu14I	TTCGAA	1 cut(s)	477
BpuEI	CTTGAG	1 cut(s)	1883
BpuMI	CCSGG	2 cut(s)	798, 896
BsaHI	GRCGYC	1 cut(s)	846
BsaI	GGTCTC	1 cut(s)	1878
BsaJI	CCNNGG	1 cut(s)	1079
BsaWI	WCCGGW	2 cut(s)	550, 814
BsaXI	ACNNNNNCTCC	2 cut(s)	662, 692
Bsc4I	CCNNNNNNNGG	8 cut(s)	40, 296, 803, 804, 1389, 1540, 1960, 1997
Bse1I	ACTGG	3 cut(s)	257, 1233, 2014
BseAI	TCCGGA	2 cut(s)	550, 814
BseBI	CCWGG	3 cut(s)	328, 409, 901
BseDI	CCNNGG	1 cut(s)	1079
BseGI	GGATG	5 cut(s)	756, 823, 1060, 1473, 1753
BseLI	CCNNNNNNNGG	8 cut(s)	40, 296, 803, 804, 1389, 1540, 1960, 1997
BseMII	CTCAG	6 cut(s)	202, 426, 897, 1889, 2115, 2163
BseNI	ACTGG	3 cut(s)	257, 1233, 2014
BseRI	GAGGAG	1 cut(s)	1994
BseXI	GCAGC	3 cut(s)	372, 378, 1931
BseYI	CCCAGC	1 cut(s)	362
Bsh1236I	CGCG	1 cut(s)	957
BshFI	GGCC	6 cut(s)	899, 1078, 1088, 1163, 1905, 2099
BsiHKAI	GWGCWC	2 cut(s)	71, 1177
BsiHKCI	CYCGRG	1 cut(s)	1959
BsiSI	CCGG	4 cut(s)	551, 798, 815, 895
BslFI	GGGAC	1 cut(s)	1239
BslI	CCNNNNNNNGG	8 cut(s)	40, 296, 803, 804, 1389, 1540, 1960, 1997
BsmAI	GTCTC	3 cut(s)	1580, 1878, 1962
BsmFI	GGGAC	1 cut(s)	1239
BsmI	GAATGC	1 cut(s)	2086
BsnI	GGCC	6 cut(s)	899, 1078, 1088, 1163, 1905, 2099
Bso31I	GGTCTC	1 cut(s)	1878
BsoBI	CYCGRG	1 cut(s)	1959
Bsp119I	TTCGAA	1 cut(s)	477
Bsp1286I	GDGCHC	3 cut(s)	71, 314, 1177
Bsp13I	TCCGGA	2 cut(s)	550, 814
Bsp143I	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
Bsp1720I	GCTNAGC	1 cut(s)	1020
BspACI	CCGC	8 cut(s)	91, 112, 388, 604, 668, 957, 1389, 1988
BspANI	GGCC	6 cut(s)	899, 1078, 1088, 1163, 1905, 2099
BspCNI	CTCAG	6 cut(s)	201, 427, 898, 1888, 2114, 2164
BspEI	TCCGGA	2 cut(s)	550, 814
BspFNI	CGCG	1 cut(s)	957
BspPI	GGATC	2 cut(s)	1844, 1952
BspQI	GCTCTTC	2 cut(s)	76, 1060
BspT104I	TTCGAA	1 cut(s)	477
BspTNI	GGTCTC	1 cut(s)	1878
BsrBI	CCGCTC	2 cut(s)	114, 668
BsrI	ACTGG	3 cut(s)	257, 1233, 2014
BssECI	CCNNGG	1 cut(s)	1079
BssMI	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
BssNI	GRCGYC	1 cut(s)	846
BssT1I	CCWWGG	1 cut(s)	1079
Bst2UI	CCWGG	3 cut(s)	328, 409, 901
Bst4CI	ACNGT	5 cut(s)	1184, 1349, 1487, 1694, 1866
Bst6I	CTCTTC	4 cut(s)	76, 92, 1060, 1316
BstACI	GRCGYC	1 cut(s)	846
BstBI	TTCGAA	1 cut(s)	477
BstC8I	GCNNGC	9 cut(s)	567, 959, 1086, 1177, 1619, 1623, 1816, 1820, 2113
BstDEI	CTNAG	8 cut(s)	188, 435, 906, 1020, 1875, 2101, 2172, 2187
BstEII	GGTNACC	1 cut(s)	1138
BstF5I	GGATG	5 cut(s)	756, 823, 1060, 1473, 1753
BstFNI	CGCG	1 cut(s)	957
BstHHI	GCGC	2 cut(s)	571, 918
BstKTI	GATC	6 cut(s)	925, 948, 1113, 1783, 1839, 1947
BstMAI	GTCTC	3 cut(s)	1580, 1878, 1962
BstMBI	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
BstMWI	GCNNNNNNNGC	5 cut(s)	269, 566, 1016, 1271, 1928
BstNI	CCWGG	3 cut(s)	328, 409, 901
BstPI	GGTNACC	1 cut(s)	1138
BstSCI	CCNGG	5 cut(s)	326, 407, 796, 894, 899
BstSFI	CTRYAG	3 cut(s)	1011, 1180, 1384
BstUI	CGCG	1 cut(s)	957
BstV1I	GCAGC	3 cut(s)	372, 378, 1931
BsuRI	GGCC	6 cut(s)	899, 1078, 1088, 1163, 1905, 2099
BtrI	CACGTC	1 cut(s)	857
BtsCI	GGATG	5 cut(s)	756, 823, 1060, 1473, 1753
BtsI	GCAGTG	1 cut(s)	200
BtsIMutI	CAGTG	5 cut(s)	200, 1189, 1287, 1334, 1500
Cac8I	GCNNGC	9 cut(s)	567, 959, 1086, 1177, 1619, 1623, 1816, 1820, 2113
CfoI	GCGC	2 cut(s)	571, 918
Cfr13I	GGNCC	4 cut(s)	897, 1161, 1353, 1903
CseI	GACGC	2 cut(s)	527, 854
Csp6I	GTAC	1 cut(s)	412
CviAII	CATG	6 cut(s)	239, 541, 1366, 2015, 2093, 2148
CviQI	GTAC	1 cut(s)	412
DdeI	CTNAG	8 cut(s)	188, 435, 906, 1020, 1875, 2101, 2172, 2187
DpnI	GATC	6 cut(s)	924, 947, 1112, 1782, 1838, 1946
DpnII	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
DraI	TTTAAA	1 cut(s)	486
DrdI	GACNNNNNNGTC	2 cut(s)	1360, 1885
DseDI	GACNNNNNNGTC	2 cut(s)	1360, 1885
Eam1104I	CTCTTC	4 cut(s)	76, 92, 1060, 1316
EarI	CTCTTC	4 cut(s)	76, 92, 1060, 1316
EciI	GGCGGA	1 cut(s)	1977
Ecl136II	GAGCTC	1 cut(s)	1175
Eco130I	CCWWGG	1 cut(s)	1079
Eco147I	AGGCCT	2 cut(s)	1078, 2099
Eco24I	GRGCYC	2 cut(s)	314, 1177
Eco31I	GGTCTC	1 cut(s)	1878
Eco47I	GGWCC	1 cut(s)	1353
Eco53kI	GAGCTC	1 cut(s)	1175
Eco57I	CTGAAG	2 cut(s)	1358, 1829
Eco88I	CYCGRG	1 cut(s)	1959
Eco91I	GGTNACC	1 cut(s)	1138
EcoICRI	GAGCTC	1 cut(s)	1175
EcoO109I	RGGNCCY	2 cut(s)	1161, 1903
EcoO65I	GGTNACC	1 cut(s)	1138
EcoRII	CCWGG	3 cut(s)	326, 407, 899
EcoT14I	CCWWGG	1 cut(s)	1079
EcoT38I	GRGCYC	2 cut(s)	314, 1177
ErhI	CCWWGG	1 cut(s)	1079
FaeI	CATG	6 cut(s)	242, 544, 1369, 2018, 2096, 2151
FalI	AAGNNNNNCTT	2 cut(s)	1013, 1045
FaqI	GGGAC	1 cut(s)	1239
FatI	CATG	6 cut(s)	238, 540, 1365, 2014, 2092, 2147
FauI	CCCGC	4 cut(s)	119, 597, 950, 1382
FbaI	TGATCA	2 cut(s)	945, 1110
Fnu4HI	GCNGC	4 cut(s)	367, 386, 389, 1920
FokI	GGATG	5 cut(s)	763, 830, 1067, 1460, 1760
FriOI	GRGCYC	2 cut(s)	314, 1177
Fsp4HI	GCNGC	4 cut(s)	367, 386, 389, 1920
FspBI	CTAG	6 cut(s)	747, 1071, 1535, 1655, 1826, 2160
GlaI	GCGC	2 cut(s)	570, 917
GluI	GCNGC	4 cut(s)	367, 386, 389, 1920
GsaI	CCCAGC	1 cut(s)	366
GsuI	CTGGAG	3 cut(s)	273, 677, 1250
HaeIII	GGCC	6 cut(s)	899, 1078, 1088, 1163, 1905, 2099
HapII	CCGG	4 cut(s)	551, 798, 815, 895
HgaI	GACGC	2 cut(s)	527, 854
HhaI	GCGC	2 cut(s)	571, 918
Hin1I	GRCGYC	1 cut(s)	846
Hin1II	CATG	6 cut(s)	242, 544, 1369, 2018, 2096, 2151
Hin6I	GCGC	2 cut(s)	569, 916
HinP1I	GCGC	2 cut(s)	569, 916
HindIII	AAGCTT	3 cut(s)	375, 480, 1619
HinfI	GANTC	6 cut(s)	156, 186, 1591, 1970, 2060, 2156
HpaII	CCGG	4 cut(s)	551, 798, 815, 895
HphI	GGTGA	5 cut(s)	66, 436, 622, 1119, 1988
Hpy166II	GTNNAC	1 cut(s)	1792
Hpy188III	TCNNGA	9 cut(s)	216, 290, 551, 694, 815, 1516, 1579, 1708, 2160
Hpy8I	GTNNAC	1 cut(s)	1792
Hpy99I	CGWCG	1 cut(s)	686
HpyAV	CCTTC	7 cut(s)	132, 207, 640, 1210, 1750, 2065, 2098
HpyCH4III	ACNGT	5 cut(s)	1184, 1349, 1487, 1694, 1866
HpyCH4IV	ACGT	2 cut(s)	856, 1509
HpyF10VI	GCNNNNNNNGC	5 cut(s)	269, 566, 1016, 1271, 1928
HpyF3I	CTNAG	8 cut(s)	188, 435, 906, 1020, 1875, 2101, 2172, 2187
HpySE526I	ACGT	2 cut(s)	856, 1509
Hsp92I	GRCGYC	1 cut(s)	846
Hsp92II	CATG	6 cut(s)	242, 544, 1369, 2018, 2096, 2151
HspAI	GCGC	2 cut(s)	569, 916
Kpn2I	TCCGGA	2 cut(s)	550, 814
Ksp22I	TGATCA	2 cut(s)	945, 1110
Kzo9I	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
LguI	GCTCTTC	2 cut(s)	76, 1060
LmnI	GCTCC	4 cut(s)	292, 1120, 1981, 2089
Lsp1109I	GCAGC	3 cut(s)	372, 378, 1931
LweI	GCATC	4 cut(s)	783, 1045, 1180, 1727
MaeI	CTAG	6 cut(s)	747, 1071, 1535, 1655, 1826, 2160
MaeII	ACGT	2 cut(s)	856, 1509
MaeIII	GTNAC	7 cut(s)	625, 718, 823, 1138, 1283, 1396, 2179
MalI	GATC	6 cut(s)	924, 947, 1112, 1782, 1838, 1946
MbiI	CCGCTC	2 cut(s)	114, 668
MboI	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
MfeI	CAATTG	1 cut(s)	1768
MhlI	GDGCHC	3 cut(s)	71, 314, 1177
MlyI	GAGTC	4 cut(s)	150, 180, 1585, 2069
MmeI	TCCRAC	3 cut(s)	178, 1032, 1331
MroI	TCCGGA	2 cut(s)	550, 814
MroXI	GAANNNNTTC	1 cut(s)	677
MseI	TTAA	9 cut(s)	174, 485, 573, 705, 1157, 1197, 1235, 1731, 2004
MspA1I	CMGCKG	1 cut(s)	385
MspI	CCGG	4 cut(s)	551, 798, 815, 895
MspR9I	CCNGG	5 cut(s)	328, 409, 798, 896, 901
MunI	CAATTG	1 cut(s)	1768
Mva1269I	GAATGC	1 cut(s)	2086
MvaI	CCWGG	3 cut(s)	328, 409, 901
MvnI	CGCG	1 cut(s)	957
MwoI	GCNNNNNNNGC	5 cut(s)	269, 566, 1016, 1271, 1928
NciI	CCSGG	2 cut(s)	798, 896
NdeII	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
NlaIII	CATG	6 cut(s)	242, 544, 1369, 2018, 2096, 2151
NmuCI	GTSAC	2 cut(s)	625, 1396
NspV	TTCGAA	1 cut(s)	477
PceI	AGGCCT	2 cut(s)	1078, 2099
PciSI	GCTCTTC	2 cut(s)	76, 1060
PctI	GAATGC	1 cut(s)	2086
PdmI	GAANNNNTTC	1 cut(s)	677
PfeI	GAWTC	2 cut(s)	1970, 2156
PflFI	GACNNNGTC	1 cut(s)	1511
PflMI	CCANNNNNTGG	1 cut(s)	296
PkrI	GCNGC	4 cut(s)	368, 387, 390, 1921
PleI	GAGTC	4 cut(s)	150, 180, 1585, 2068
PpsI	GAGTC	4 cut(s)	150, 180, 1585, 2068
PshBI	ATTAAT	1 cut(s)	2004
PsiI	TTATAA	1 cut(s)	1206
Psp124BI	GAGCTC	1 cut(s)	1177
Psp6I	CCWGG	3 cut(s)	326, 407, 899
PspEI	GGTNACC	1 cut(s)	1138
PspFI	CCCAGC	1 cut(s)	362
PspGI	CCWGG	3 cut(s)	326, 407, 899
PspPI	GGNCC	4 cut(s)	897, 1161, 1353, 1903
PsyI	GACNNNGTC	1 cut(s)	1511
PvuII	CAGCTG	1 cut(s)	385
RsaI	GTAC	1 cut(s)	413
RsaNI	GTAC	1 cut(s)	412
SacI	GAGCTC	1 cut(s)	1177
SapI	GCTCTTC	2 cut(s)	76, 1060
SaqAI	TTAA	9 cut(s)	174, 485, 573, 705, 1157, 1197, 1235, 1731, 2004
SatI	GCNGC	4 cut(s)	367, 386, 389, 1920
Sau3AI	GATC	6 cut(s)	922, 945, 1110, 1780, 1836, 1944
Sau96I	GGNCC	4 cut(s)	897, 1161, 1353, 1903
SchI	GAGTC	4 cut(s)	150, 180, 1585, 2069
ScrFI	CCNGG	5 cut(s)	328, 409, 798, 896, 901
SduI	GDGCHC	3 cut(s)	71, 314, 1177
SfaNI	GCATC	4 cut(s)	783, 1045, 1180, 1727
SfcI	CTRYAG	3 cut(s)	1011, 1180, 1384
SfuI	TTCGAA	1 cut(s)	477
SinI	GGWCC	1 cut(s)	1353
SmlI	CTYRAG	1 cut(s)	1898
SmoI	CTYRAG	1 cut(s)	1898
SseBI	AGGCCT	2 cut(s)	1078, 2099
SsiI	CCGC	8 cut(s)	91, 112, 388, 604, 668, 957, 1389, 1988
SspI	AATATT	2 cut(s)	304, 505
SspMI	CTAG	6 cut(s)	747, 1071, 1535, 1655, 1826, 2160
SstI	GAGCTC	1 cut(s)	1177
StuI	AGGCCT	2 cut(s)	1078, 2099
StyD4I	CCNGG	5 cut(s)	326, 407, 796, 894, 899
StyI	CCWWGG	1 cut(s)	1079
TaaI	ACNGT	5 cut(s)	1184, 1349, 1487, 1694, 1866
TaiI	ACGT	2 cut(s)	859, 1512
TaqI	TCGA	6 cut(s)	338, 477, 681, 728, 925, 1736
TauI	GCSGC	1 cut(s)	391
TfiI	GAWTC	2 cut(s)	1970, 2156
Tru1I	TTAA	9 cut(s)	174, 485, 573, 705, 1157, 1197, 1235, 1731, 2004
Tru9I	TTAA	9 cut(s)	174, 485, 573, 705, 1157, 1197, 1235, 1731, 2004
TscAI	CASTG	5 cut(s)	207, 1189, 1294, 1341, 1507
TseFI	GTSAC	2 cut(s)	625, 1396
TseI	GCWGC	3 cut(s)	366, 385, 1919
Tsp45I	GTSAC	2 cut(s)	625, 1396
TspDTI	ATGAA	7 cut(s)	16, 1019, 1229, 1308, 1334, 1662, 2157
TspRI	CASTG	5 cut(s)	207, 1189, 1294, 1341, 1507
Tth111I	GACNNNGTC	1 cut(s)	1511
Van91I	CCANNNNNTGG	1 cut(s)	296
VpaK11BI	GGWCC	1 cut(s)	1353
VspI	ATTAAT	1 cut(s)	2004
XapI	RAATTY	4 cut(s)	322, 951, 970, 1095
XbaI	TCTAGA	1 cut(s)	2159
XmnI	GAANNNNTTC	1 cut(s)	677
XspI	CTAG	6 cut(s)	747, 1071, 1535, 1655, 1826, 2160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.