Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr10

Orthogroup ID

OG0001673

Physical Location & Seq

Genomic Coordinates Reverse (-)

41341032 .. 41343160

Gene Structure 2129 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD10G1337400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGGCTTGTCACTTGTGCTCTTCACCTTCTTTTTTCTTCCGCAACCCCCAAACTCCATCCCGCTCTCTCCCTTCTTCTTCTTCCCCGACTGATTTCCGATTCCAAAGCTCTGCAATTAACACCCACAGACTCAGTTTTCCTTCACTGCAATTTCAGTCAAGTACCTCTCTGCAAATACACCATGTTTCTTTGCAAGACCCAGTTGCAGAAGAAGCCCAGAACTCCAAAGCTCCAGAAATTGGAAATATTCAGAGCCCAGATGGAAATTCCGAGTCTTTGTCGAAAAGCTATATCTGGGTCAATCCCAGCAGCCCCAGAGCTTCACAGCTGCGGCATAAGTCCTACGATTCCAGGTACGCTTCTTTGGTGAAGGTAGCTGAGTATTTGAACTCTTGCACTGCGATTGAAAGTGATGTTTTCGAAGCTTTAAAAGATTTAGGGGATAATTTTCTGGAACAAGACGCTGTGGTGGTTCTGAATAACATGAACAATCCGGAAAATGCTTTGCTTGCGCTTAACTACTTTCAGCAGAGTAAACCGAAGCGGGAGGTGATTTTGTATAATGTGACTTTGAAAGTGTGTAGGAAGGGTAGGGATATGGAGAGAGCAGAGAAGTTGTTCGACAAAATACTCCAGAGAGGTTTTGAGAATATGCCCTGTTTTGGGTGTAATCCAGATGATGTTACCTATTCGGCTATGATCGACGCCTATGGACGTGCTGGTAAGGTTGAAATGGCTTTCAGTTTGTACGACCGGGCCAGGACTGAGAAGTGGCGCATTGATCCAGTGGCGTTTTCTACATTAATCAAAATTCACGGGCAATCGGGGAATTTTGATGGGTGCTTGAATGTTTATGAGGAAATGAAAGCTATAGGGGCTAAGCCAAACTTGGAAGCCTTGGCAGGCCAAGAAAATTTACCGAGAGTGATCAGCAAGGAGCTTTCACCAAATTGGGTAACCTATGCAAGTCTTTTAAGGGCCTATGGTAGAGCTCGCTACAGTGATGATGCTCTTAATGTTTATAAAGAGATGAAGGAAAAGGGACTGGAGTTAAATGTAATTCTCTATAACACCCTTTTAGCTATGTGTGCTGATGTTGGTTACACCAACGAAGCCGTTGAGATTTTTGAAGAAATGAAGACTTCTGAAACACTGAAGCCTGACAGTTGGTCATTTTCGTCCATGATTACCATATATTCCTGTAGTGGGAAAGTTACAGAAGCAGAAGCTACATTGAATGAGATGTTGGAAGCTGGTTTTGAGCAAAATATCTTTATTTTGACATCACTTATCCAATGCTACGGTAAGGCAAAACGCACTGATGACGTTGTCAGGATATTCAATCAACTCCTAGAATTGGGTATAACACCAGATGAGCGTTTCTGTGGTTGTTTCCTGAATGTGATGACTCAAACACCAAAGGAAGAACTTTGCAAGCTTGCGAACTGCATTGAGAGGGCTGATGAAAAACTATGGTATGTGGTAAGACTTTTGGTGGAAAAGCAAGACAGTAGTGAAAAGTTCAAGAACGAAGCATCACAACTTTTTAACTCAATTGGTTTGGATGTAAAGAAGGCTTACTGCAATTGCCTGATTGATCTTTGTGTGAACCTCAATCTCTTGGAGAGAGCCTGTGAGCTACTAGACTTGGGGATCACACTTCGGATATACATAGGCTTACAGTCAAGGTCTCAGACCCAGTGGTCTCTGTATCTCAAGGGCCTCTCTCTTGGGGCAGCTCTGACTGCATTACATATTTGGATCAATGACCTGTCTTGGGTATTGGAATCTAGTGAGGAACTTCCGCCGTTGCTTGGAATTAATACTGGACATGGAAAACATAAGTATTCAGACAAAGGTCTGGCGAGTGTATTTGGGTCGCATTTGAAGGAATTGAATGCTCCATTCCATGAGGCCTCAGACAAGGCTGGATGGTTTTTGACAACAAGGGTTGCAGTCATGTCATGGTTAGAATCTAGAAGTTCATCTGAGTTAGTTACTGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031425 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

669

Amino Acids

75.04

Weight (kDa)

5.53

Isoelectric Point (pI)

46.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	167 - 295	8e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	222 - 252	3.6e-08	PPR repeat
PPR_2	PF13041	225 - 270	1.4e-07	PPR repeat family
PPR	PF01535	228 - 252	7.9e-07	PPR repeat
PPR_3	PF13812	312 - 363	6e-10	Pentatricopeptide repeat domain
PPR_2	PF13041	316 - 353	6.3e-07	PPR repeat family
PPR	PF01535	319 - 349	1.2e-06	PPR repeat
PPR_long	PF17177	335 - 476	9.4e-11	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	343 - 399	3.3e-09	Pentatricopeptide repeat domain
PPR_2	PF13041	352 - 397	1.5e-08	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Orthologous Genes (Group: OG0001673)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16390
fragaria_vesca	FvH4_3g00440 FvH4_3g00470
malus_domestica	MD00G1221000.v1.1 MD05G1360400.v1.1 MD08G1234300.v1.1 MD10G1337400.v1.1 MD10G1337800.v1.1 MD10G1338000.v1.1
prunus_persica	Prupe.3G138500_v2.0.a1 Prupe.4G005200_v2.0.a1
pyrus_communis	pycom05g32720 pycom10g28680 pycom10g28700 pycom10g28720 pycom10g28750
rosa_chinensis	RchiOBHm_Chr1g0364151 RchiOBHm_Chr2g0155431 RchiOBHm_Chr4g0402181 RchiOBHm_Chr5g0000631 RchiOBHm_Chr6g0271321
rosa_laevigata	RLG00000004254 RLG00000013858 RLG00000028931 RLG00000030883
rosa_multiflora	Rmu_co8004710.1_g000001 Rmu_co8021096.1_g000001 Rmu_co8161794.1_g000001 Rmu_sc0000795.1_g000110 Rmu_sc0001141.1_g000016 Rmu_sc0003662.1_g000007 Rmu_sc0003699.1_g000009 Rmu_sc0006695.1_g000081 Rmu_sc0010255.1_g000007 Rmu_sc0011992.1_g000014 Rmu_sc0016929.1_g000002 Rmu_sc0017523.1_g000008 Rmu_sc0021532.1_g000001 Rmu_sc0029877.1_g000001
rosa_roxburghii	Rroxscaffold_1G00001310 Rroxscaffold_1G00075570 Rroxscaffold_4G00324290
rosa_rugosa	Rorug04G0385500 Rorug07G0309300.1
rosa_samantha	Rh5AG005400 Rh5BG007000 Rh5CG005700 Rh5DG005600
rosa_wichuraiana	Rw5G000530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1023
AasI	GACNNNNNNGTC	1 cut(s)	1702
AccB7I	CCANNNNNTGG	1 cut(s)	239
AccBSI	CCGCTC	1 cut(s)	63
AccIII	TCCGGA	1 cut(s)	493
AciI	CCGC	5 cut(s)	40, 61, 331, 544, 1805
AclWI	GGATC	3 cut(s)	776, 1661, 1769
AcsI	RAATTY	4 cut(s)	265, 810, 829, 913
AcuI	CTGAAG	1 cut(s)	1175
AcyI	GRCGYC	1 cut(s)	705
AfaI	GTAC	3 cut(s)	163, 356, 749
AfiI	CCNNNNNNNGG	7 cut(s)	239, 662, 663, 1206, 1357, 1777, 1814
AhdI	GACNNNNNGTC	1 cut(s)	1168
AjiI	CACGTC	1 cut(s)	716
AjnI	CCWGG	2 cut(s)	350, 758
AjuI	GAANNNNNNNTTGG	2 cut(s)	1229, 1261
Alw21I	GWGCWC	2 cut(s)	20, 994
Alw26I	GTCTC	2 cut(s)	1695, 1710
AlwI	GGATC	3 cut(s)	776, 1661, 1769
Aor13HI	TCCGGA	1 cut(s)	493
AoxI	GGCC	5 cut(s)	756, 904, 978, 1720, 1914
ApeKI	GCWGC	3 cut(s)	309, 328, 1736
ApoI	RAATTY	4 cut(s)	265, 810, 829, 913
AseI	ATTAAT	2 cut(s)	803, 1821
Asp700I	GAANNNNTTC	1 cut(s)	617
AspLEI	GCGC	2 cut(s)	514, 777
AspS9I	GGNCC	3 cut(s)	756, 978, 1720
AsuC2I	CCSGG	1 cut(s)	755
AsuHPI	GGTGA	4 cut(s)	15, 379, 562, 936
AsuII	TTCGAA	1 cut(s)	420
BanII	GRGCYC	2 cut(s)	257, 994
BbsI	GAAGAC	1 cut(s)	1145
Bbv12I	GWGCWC	2 cut(s)	20, 994
BbvI	GCAGC	3 cut(s)	315, 321, 1748
BccI	CCATC	4 cut(s)	64, 254, 830, 1926
BceAI	ACGGC	2 cut(s)	1100, 1792
BciT130I	CCWGG	2 cut(s)	352, 760
BclI	TGATCA	1 cut(s)	927
BcnI	CCSGG	1 cut(s)	755
BcoDI	GTCTC	2 cut(s)	1695, 1710
BfaI	CTAG	4 cut(s)	1352, 1643, 1791, 1977
BfmI	CTRYAG	3 cut(s)	870, 997, 1201
BisI	GCNGC	4 cut(s)	310, 329, 332, 1737
BlpI	GCTNAGC	1 cut(s)	879
BlsI	GCNGC	4 cut(s)	311, 330, 333, 1738
Bme1390I	CCNGG	3 cut(s)	352, 755, 760
BmeRI	GACNNNNNGTC	1 cut(s)	1168
BmgBI	CACGTC	1 cut(s)	716
BmgT120I	GGNCC	3 cut(s)	756, 978, 1720
BmrFI	CCNGG	3 cut(s)	352, 755, 760
BmrI	ACTGGG	2 cut(s)	194, 1693
BmsI	GCATC	2 cut(s)	997, 1544
BmuI	ACTGGG	2 cut(s)	194, 1693
BoxI	GACNNNNGTC	1 cut(s)	1857
BpiI	GAAGAC	1 cut(s)	1145
BpmI	CTGGAG	3 cut(s)	216, 617, 1067
Bpu1102I	GCTNAGC	1 cut(s)	879
Bpu14I	TTCGAA	1 cut(s)	420
BpuEI	CTTGAG	1 cut(s)	1700
BpuMI	CCSGG	1 cut(s)	755
BsaHI	GRCGYC	1 cut(s)	705
BsaI	GGTCTC	2 cut(s)	1695, 1710
BsaJI	CCNNGG	1 cut(s)	897
BsaWI	WCCGGW	1 cut(s)	493
Bsc4I	CCNNNNNNNGG	7 cut(s)	239, 662, 663, 1206, 1357, 1777, 1814
Bse1I	ACTGG	5 cut(s)	200, 785, 1050, 1699, 1831
BseAI	TCCGGA	1 cut(s)	493
BseBI	CCWGG	2 cut(s)	352, 760
BseDI	CCNNGG	1 cut(s)	897
BseGI	GGATG	3 cut(s)	56, 1570, 1937
BseLI	CCNNNNNNNGG	7 cut(s)	239, 662, 663, 1206, 1357, 1777, 1814
BseMII	CTCAG	6 cut(s)	145, 369, 756, 1706, 1932, 1980
BseNI	ACTGG	5 cut(s)	200, 785, 1050, 1699, 1831
BseXI	GCAGC	3 cut(s)	315, 321, 1748
BseYI	CCCAGC	1 cut(s)	305
Bsh1285I	CGRYCG	1 cut(s)	754
BshFI	GGCC	5 cut(s)	758, 906, 980, 1722, 1916
BsiEI	CGRYCG	1 cut(s)	754
BsiHKAI	GWGCWC	2 cut(s)	20, 994
BsiSI	CCGG	2 cut(s)	494, 754
BslFI	GGGAC	1 cut(s)	1056
BslI	CCNNNNNNNGG	7 cut(s)	239, 662, 663, 1206, 1357, 1777, 1814
BsmAI	GTCTC	2 cut(s)	1695, 1710
BsmFI	GGGAC	1 cut(s)	1056
BsmI	GAATGC	1 cut(s)	1903
BsnI	GGCC	5 cut(s)	758, 906, 980, 1722, 1916
Bso31I	GGTCTC	2 cut(s)	1695, 1710
Bsp119I	TTCGAA	1 cut(s)	420
Bsp1286I	GDGCHC	3 cut(s)	20, 257, 994
Bsp13I	TCCGGA	1 cut(s)	493
Bsp143I	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
Bsp1720I	GCTNAGC	1 cut(s)	879
BspACI	CCGC	5 cut(s)	40, 61, 331, 544, 1805
BspANI	GGCC	5 cut(s)	758, 906, 980, 1722, 1916
BspCNI	CTCAG	6 cut(s)	144, 370, 757, 1705, 1931, 1981
BspEI	TCCGGA	1 cut(s)	493
BspPI	GGATC	3 cut(s)	776, 1661, 1769
BspQI	GCTCTTC	1 cut(s)	25
BspT104I	TTCGAA	1 cut(s)	420
BspTNI	GGTCTC	2 cut(s)	1695, 1710
BsrBI	CCGCTC	1 cut(s)	63
BsrI	ACTGG	5 cut(s)	200, 785, 1050, 1699, 1831
BssECI	CCNNGG	1 cut(s)	897
BssMI	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
BssNI	GRCGYC	1 cut(s)	705
BssT1I	CCWWGG	1 cut(s)	897
Bst2UI	CCWGG	2 cut(s)	352, 760
Bst4CI	ACNGT	5 cut(s)	1001, 1166, 1304, 1511, 1683
Bst6I	CTCTTC	1 cut(s)	25
BstACI	GRCGYC	1 cut(s)	705
BstBI	TTCGAA	1 cut(s)	420
BstC8I	GCNNGC	5 cut(s)	510, 904, 994, 1436, 1440
BstDEI	CTNAG	8 cut(s)	131, 378, 765, 879, 1692, 1918, 1989, 2004
BstEII	GGTNACC	1 cut(s)	955
BstF5I	GGATG	3 cut(s)	56, 1570, 1937
BstHHI	GCGC	2 cut(s)	514, 777
BstKTI	GATC	6 cut(s)	702, 784, 930, 1600, 1656, 1764
BstMAI	GTCTC	2 cut(s)	1695, 1710
BstMBI	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
BstMCI	CGRYCG	1 cut(s)	754
BstMWI	GCNNNNNNNGC	5 cut(s)	212, 509, 875, 1088, 1745
BstNI	CCWGG	2 cut(s)	352, 760
BstPAI	GACNNNNGTC	1 cut(s)	1857
BstPI	GGTNACC	1 cut(s)	955
BstSCI	CCNGG	3 cut(s)	350, 753, 758
BstSFI	CTRYAG	3 cut(s)	870, 997, 1201
BstV1I	GCAGC	3 cut(s)	315, 321, 1748
BstV2I	GAAGAC	1 cut(s)	1145
BsuRI	GGCC	5 cut(s)	758, 906, 980, 1722, 1916
BtrI	CACGTC	1 cut(s)	716
BtsCI	GGATG	3 cut(s)	56, 1570, 1937
BtsI	GCAGTG	2 cut(s)	143, 396
BtsIMutI	CAGTG	7 cut(s)	143, 396, 792, 1006, 1151, 1317, 1706
Cac8I	GCNNGC	5 cut(s)	510, 904, 994, 1436, 1440
CfoI	GCGC	2 cut(s)	514, 777
Cfr13I	GGNCC	3 cut(s)	756, 978, 1720
CseI	GACGC	2 cut(s)	470, 713
Csp6I	GTAC	3 cut(s)	162, 355, 748
CviAII	CATG	7 cut(s)	182, 484, 1183, 1832, 1910, 1960, 1965
CviQI	GTAC	3 cut(s)	162, 355, 748
DdeI	CTNAG	8 cut(s)	131, 378, 765, 879, 1692, 1918, 1989, 2004
DpnI	GATC	6 cut(s)	701, 783, 929, 1599, 1655, 1763
DpnII	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
DraI	TTTAAA	1 cut(s)	429
DrdI	GACNNNNNNGTC	1 cut(s)	1702
DriI	GACNNNNNGTC	1 cut(s)	1168
DseDI	GACNNNNNNGTC	1 cut(s)	1702
Eam1104I	CTCTTC	1 cut(s)	25
Eam1105I	GACNNNNNGTC	1 cut(s)	1168
EarI	CTCTTC	1 cut(s)	25
EciI	GGCGGA	1 cut(s)	1794
Ecl136II	GAGCTC	1 cut(s)	992
Eco130I	CCWWGG	1 cut(s)	897
Eco147I	AGGCCT	1 cut(s)	1916
Eco24I	GRGCYC	2 cut(s)	257, 994
Eco31I	GGTCTC	2 cut(s)	1695, 1710
Eco53kI	GAGCTC	1 cut(s)	992
Eco57I	CTGAAG	1 cut(s)	1175
Eco91I	GGTNACC	1 cut(s)	955
EcoICRI	GAGCTC	1 cut(s)	992
EcoO109I	RGGNCCY	2 cut(s)	978, 1720
EcoO65I	GGTNACC	1 cut(s)	955
EcoRII	CCWGG	2 cut(s)	350, 758
EcoT14I	CCWWGG	1 cut(s)	897
EcoT38I	GRGCYC	2 cut(s)	257, 994
ErhI	CCWWGG	1 cut(s)	897
FaeI	CATG	7 cut(s)	185, 487, 1186, 1835, 1913, 1963, 1968
FalI	AAGNNNNNCTT	2 cut(s)	872, 904
FaqI	GGGAC	1 cut(s)	1056
FatI	CATG	7 cut(s)	181, 483, 1182, 1831, 1909, 1959, 1964
FauI	CCCGC	2 cut(s)	68, 537
FbaI	TGATCA	1 cut(s)	927
Fnu4HI	GCNGC	4 cut(s)	310, 329, 332, 1737
FokI	GGATG	3 cut(s)	43, 1577, 1944
FriOI	GRGCYC	2 cut(s)	257, 994
Fsp4HI	GCNGC	4 cut(s)	310, 329, 332, 1737
FspBI	CTAG	4 cut(s)	1352, 1643, 1791, 1977
GlaI	GCGC	2 cut(s)	513, 776
GluI	GCNGC	4 cut(s)	310, 329, 332, 1737
GsaI	CCCAGC	1 cut(s)	309
GsuI	CTGGAG	3 cut(s)	216, 617, 1067
HaeIII	GGCC	5 cut(s)	758, 906, 980, 1722, 1916
HapII	CCGG	2 cut(s)	494, 754
HgaI	GACGC	2 cut(s)	470, 713
HhaI	GCGC	2 cut(s)	514, 777
Hin1I	GRCGYC	1 cut(s)	705
Hin1II	CATG	7 cut(s)	185, 487, 1186, 1835, 1913, 1963, 1968
Hin6I	GCGC	2 cut(s)	512, 775
HinP1I	GCGC	2 cut(s)	512, 775
HindIII	AAGCTT	2 cut(s)	423, 1436
HinfI	GANTC	7 cut(s)	99, 129, 272, 347, 1408, 1787, 1973
HpaII	CCGG	2 cut(s)	494, 754
HphI	GGTGA	4 cut(s)	15, 379, 562, 936
Hpy166II	GTNNAC	2 cut(s)	536, 1609
Hpy188III	TCNNGA	9 cut(s)	233, 452, 494, 634, 674, 1333, 1396, 1525, 1977
Hpy8I	GTNNAC	2 cut(s)	536, 1609
Hpy99I	CGWCG	1 cut(s)	707
HpyAV	CCTTC	8 cut(s)	36, 81, 150, 364, 580, 1027, 1567, 1882
HpyCH4III	ACNGT	5 cut(s)	1001, 1166, 1304, 1511, 1683
HpyCH4IV	ACGT	2 cut(s)	715, 1326
HpyF10VI	GCNNNNNNNGC	5 cut(s)	212, 509, 875, 1088, 1745
HpyF3I	CTNAG	8 cut(s)	131, 378, 765, 879, 1692, 1918, 1989, 2004
HpySE526I	ACGT	2 cut(s)	715, 1326
Hsp92I	GRCGYC	1 cut(s)	705
Hsp92II	CATG	7 cut(s)	185, 487, 1186, 1835, 1913, 1963, 1968
HspAI	GCGC	2 cut(s)	512, 775
Kpn2I	TCCGGA	1 cut(s)	493
Ksp22I	TGATCA	1 cut(s)	927
Kzo9I	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
LguI	GCTCTTC	1 cut(s)	25
LmnI	GCTCC	3 cut(s)	235, 937, 1906
Lsp1109I	GCAGC	3 cut(s)	315, 321, 1748
LweI	GCATC	2 cut(s)	997, 1544
MaeI	CTAG	4 cut(s)	1352, 1643, 1791, 1977
MaeII	ACGT	2 cut(s)	715, 1326
MaeIII	GTNAC	7 cut(s)	8, 565, 682, 955, 1100, 1213, 1996
MalI	GATC	6 cut(s)	701, 783, 929, 1599, 1655, 1763
MbiI	CCGCTC	1 cut(s)	63
MboI	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
MboII	GAAGA	9 cut(s)	12, 28, 66, 69, 72, 221, 1142, 1150, 1436
MfeI	CAATTG	2 cut(s)	1554, 1585
MhlI	GDGCHC	3 cut(s)	20, 257, 994
MlyI	GAGTC	3 cut(s)	123, 281, 1402
MmeI	TCCRAC	1 cut(s)	1227
MroI	TCCGGA	1 cut(s)	493
MroXI	GAANNNNTTC	1 cut(s)	617
MseI	TTAA	9 cut(s)	117, 428, 516, 803, 974, 1014, 1052, 1548, 1821
MspA1I	CMGCKG	1 cut(s)	328
MspI	CCGG	2 cut(s)	494, 754
MspR9I	CCNGG	3 cut(s)	352, 755, 760
MunI	CAATTG	2 cut(s)	1554, 1585
Mva1269I	GAATGC	1 cut(s)	1903
MvaI	CCWGG	2 cut(s)	352, 760
MwoI	GCNNNNNNNGC	5 cut(s)	212, 509, 875, 1088, 1745
NciI	CCSGG	1 cut(s)	755
NdeII	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
NlaIII	CATG	7 cut(s)	185, 487, 1186, 1835, 1913, 1963, 1968
NmuCI	GTSAC	2 cut(s)	8, 565
NspV	TTCGAA	1 cut(s)	420
PceI	AGGCCT	1 cut(s)	1916
PciSI	GCTCTTC	1 cut(s)	25
PctI	GAATGC	1 cut(s)	1903
PdmI	GAANNNNTTC	1 cut(s)	617
PfeI	GAWTC	4 cut(s)	99, 347, 1787, 1973
PflFI	GACNNNGTC	1 cut(s)	1328
PflMI	CCANNNNNTGG	1 cut(s)	239
PkrI	GCNGC	4 cut(s)	311, 330, 333, 1738
PleI	GAGTC	3 cut(s)	123, 280, 1402
PpsI	GAGTC	3 cut(s)	123, 280, 1402
PshAI	GACNNNNGTC	1 cut(s)	1857
PshBI	ATTAAT	2 cut(s)	803, 1821
PsiI	TTATAA	1 cut(s)	1023
Psp124BI	GAGCTC	1 cut(s)	994
Psp6I	CCWGG	2 cut(s)	350, 758
PspEI	GGTNACC	1 cut(s)	955
PspFI	CCCAGC	1 cut(s)	305
PspGI	CCWGG	2 cut(s)	350, 758
PspPI	GGNCC	3 cut(s)	756, 978, 1720
PsyI	GACNNNGTC	1 cut(s)	1328
PvuII	CAGCTG	1 cut(s)	328
RsaI	GTAC	3 cut(s)	163, 356, 749
RsaNI	GTAC	3 cut(s)	162, 355, 748
SacI	GAGCTC	1 cut(s)	994
SapI	GCTCTTC	1 cut(s)	25
SaqAI	TTAA	9 cut(s)	117, 428, 516, 803, 974, 1014, 1052, 1548, 1821
SatI	GCNGC	4 cut(s)	310, 329, 332, 1737
Sau3AI	GATC	6 cut(s)	699, 781, 927, 1597, 1653, 1761
Sau96I	GGNCC	3 cut(s)	756, 978, 1720
SchI	GAGTC	3 cut(s)	123, 281, 1402
ScrFI	CCNGG	3 cut(s)	352, 755, 760
SduI	GDGCHC	3 cut(s)	20, 257, 994
SfaNI	GCATC	2 cut(s)	997, 1544
SfcI	CTRYAG	3 cut(s)	870, 997, 1201
SfuI	TTCGAA	1 cut(s)	420
SmlI	CTYRAG	1 cut(s)	1715
SmoI	CTYRAG	1 cut(s)	1715
SseBI	AGGCCT	1 cut(s)	1916
SsiI	CCGC	5 cut(s)	40, 61, 331, 544, 1805
SspI	AATATT	1 cut(s)	247
SspMI	CTAG	4 cut(s)	1352, 1643, 1791, 1977
SstI	GAGCTC	1 cut(s)	994
StuI	AGGCCT	1 cut(s)	1916
StyD4I	CCNGG	3 cut(s)	350, 753, 758
StyI	CCWWGG	1 cut(s)	897
TaaI	ACNGT	5 cut(s)	1001, 1166, 1304, 1511, 1683
TaiI	ACGT	2 cut(s)	718, 1329
TaqI	TCGA	4 cut(s)	281, 420, 621, 702
TauI	GCSGC	1 cut(s)	334
TfiI	GAWTC	4 cut(s)	99, 347, 1787, 1973
Tru1I	TTAA	9 cut(s)	117, 428, 516, 803, 974, 1014, 1052, 1548, 1821
Tru9I	TTAA	9 cut(s)	117, 428, 516, 803, 974, 1014, 1052, 1548, 1821
TscAI	CASTG	7 cut(s)	150, 403, 792, 1006, 1158, 1324, 1706
TseFI	GTSAC	2 cut(s)	8, 565
TseI	GCWGC	3 cut(s)	309, 328, 1736
Tsp45I	GTSAC	2 cut(s)	8, 565
TspDTI	ATGAA	6 cut(s)	500, 878, 1046, 1151, 1479, 1974
TspRI	CASTG	7 cut(s)	150, 403, 792, 1006, 1158, 1324, 1706
Tth111I	GACNNNGTC	1 cut(s)	1328
Van91I	CCANNNNNTGG	1 cut(s)	239
VspI	ATTAAT	2 cut(s)	803, 1821
XapI	RAATTY	4 cut(s)	265, 810, 829, 913
XbaI	TCTAGA	1 cut(s)	1976
XmnI	GAANNNNTTC	1 cut(s)	617
XspI	CTAG	4 cut(s)	1352, 1643, 1791, 1977

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.