Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0001605

Physical Location & Seq

Genomic Coordinates Reverse (-)

6632123 .. 6633712

Gene Structure 1590 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1070100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1590 bp

ATGTCCCAAAAAGATGAAAATGTAGTTTCCATGAAGAAGGAGCTGTCCATGACGAAAGTTGCGAAAAGAGGAGGTGGACAAGCAAGCGGAGGAGACCAAGGCCAACCTGCAGAAATCACCACCACGGAGCAAACTTCAGAGGAGGCGATTACAATCCATGAGGAGGTAATAAGAACCAGTAGGGGGGAGAAACTAAAGAAAATGAGGGATGCATTGGCAGAAGCAGCTCAAAAGCAAAATGCCGAACCAAAGATCCAAAGGGTTCCCTTCATGCTCCGTGATCACAAAAATTTAGACAAGTACTACGAGCCAAGGGTGGTAGCACTCGGTCCTCGCCACCATGGTAAAGAAAAGTACAAGCAGGCAGAGAAAGTCAAGCTTCAATTGACAGAACACTTTATCAAAGATAGTGAGCAGACTAATAACGATGAAACGTTGCTCAAGAACGTTGAGGACAAGATTAAGGAGCTAAGGGAGTGCTATGATGACGAAGCAACAAAGGACCACGATGATGAGGCCCTCGCGTGGATGCTGTTCGTTGATGGGTGTTCGACGTTGGAATTCATGTACAAATATAAGGAGTTGGAAGCTTTTAAGATCAAGAGAGACCAAGTGGCATTTGTAGAACAGGACATGTTCCTGCTAGAAAACCAACTCCCCTATCAACTCCTCGAGTTGCTGATCAGCTCAAGCAACAAACGTGTGGACTTGGAAGCCTCAATCGAGGAATTTGTCAAGATGCATGGTGGAGCACCAGTAGTTCAAGGCCCTGCCGTGGAAAGAAAGCCAACTCATCTTCTTGACCTTCTTCGGACAAGAATGGTAGGACGTCCACCTAGCCTGAGTACAGAACCAGGATGTACTCATCATATTCTTGACCTTCGGCCAATGGTAGGACCTCGACCTAGCCAGAGTACAAAACCAGGATGTACTCATCGTCTTCTTGACCTTCTTCAGACAATGGTAGGACCTCGACCTAGCGCCTTGCTTCATTCTTTTCGCAACGTACAAGAGCTTCAGGCAGCCGGTATCCATTTTAGGCCTAGTGAGAAAAACTCATTGATGGACATATATTTTAAGCCTCTGTTTCTATGCTGTGGATTCCTTTATCTTCCCATAATAAAAGTTGACGACTCGATGGGGCCTAAGTTCATGAACATCATAGCCTACGAAATGTGTCCTGATTTCCAGAACGATTTTGTGGTCACCTCTTACATAGGCTTCCTCGATTCGCTCATTGATCATGCAGACGATGTGAAGCACTTGAGGAAAAAGGGCATAGTTCAAAACTTGCTTGGGAGTGATCAGGAGGTGGCTGAACTCTTCAACGAGATAAGCACTGACTTGGTCCCTAACGATGCGATTTACCGAAATGTTACAGCACAGATAGAATATCACTACAAAACCAAGTGGAAGACATGGATGGCTCAATTCTTTCATGACCATTTCAATAGTCCCTGGACTTTCTTGGGTTTCATTGGCGTTCTACTAGGACTTGGCTTGAGCGGTATGCAGACGTGGTATGCAGCCTTTTCCGATCCCTGTCCATGTGATGCCGTATGCAAGTACCTGAAAACACACCCCGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF247

Protein Analysis

530

Amino Acids

60.34

Weight (kDa)

6.05

Isoelectric Point (pI)

41.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF247	PF03140	85 - 499	2.7e-95	Plant protein of unknown function

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001605)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g02910 FvH4_6g25140
malus_domestica	MD00G1049100.v1.1 MD02G1233700.v1.1 MD07G1070100.v1.1 MD12G1022100.v1.1
prunus_persica	Prupe.7G045600_v2.0.a1 Prupe.7G045700_v2.0.a1 Prupe.7G045800_v2.0.a1 Prupe.7G046000_v2.0.a1 Prupe.8G075900_v2.0.a1 Prupe.8G076000_v2.0.a1
pyrus_communis	pycom12g02050 pycom12g07700 pycom12g07720 pycom14g07350 pycom14g07360
rosa_chinensis	RchiOBHm_Chr2g0125011
rosa_laevigata	RLG00000009906 RLG00000018842
rosa_multiflora	Rmu_sc0000796.1_g000003 Rmu_sc0000796.1_g000022 Rmu_sc0000796.1_g000026 Rmu_sc0001251.1_g000010 Rmu_sc0001251.1_g000012 Rmu_sc0010311.1_g000001 Rmu_sc0010311.1_g000003 Rmu_sc0010311.1_g000008 Rmu_sc0010311.1_g000010
rosa_roxburghii	Rroxscaffold_2G00118310 Rroxscaffold_2G00118330 Rroxscaffold_2G00118420 Rroxscaffold_2G00118460 Rroxscaffold_2G00118760
rosa_rugosa	Rorug02G0254900
rosa_samantha	Rh2AG313200 Rh2AG313500 Rh2BG321400 Rh2BG321800 Rh2CG303200 Rh2CG303500 Rh2CG303900 Rh2CG304000 Rh2DG339200 Rh2DG339500 Rh2DG340000 Rh2DG340100
rosa_wichuraiana	Rw2G025320 Rw2G025330 Rw2G025360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	832
Acc36I	ACCTGC	1 cut(s)	115
AccBSI	CCGCTC	1 cut(s)	1506
AccII	CGCG	1 cut(s)	524
AciI	CCGC	2 cut(s)	87, 1506
AclI	AACGTT	2 cut(s)	434, 447
AclWI	GGATC	2 cut(s)	247, 1532
AcoI	YGGCCR	1 cut(s)	884
AcsI	RAATTY	3 cut(s)	289, 560, 728
AcuI	CTGAAG	3 cut(s)	120, 938, 1001
AcyI	GRCGYC	1 cut(s)	829
AfaI	GTAC	9 cut(s)	302, 356, 569, 847, 862, 916, 931, 1008, 1568
AfiI	CCNNNNNNNGG	5 cut(s)	163, 183, 525, 775, 893
AflIII	ACRYGT	2 cut(s)	633, 700
AgsI	TTSAA	5 cut(s)	383, 764, 1286, 1327, 1450
AjiI	CACGTC	1 cut(s)	1518
AjnI	CCWGG	3 cut(s)	853, 922, 1457
AloI	GAACNNNNNNTCC	2 cut(s)	237, 269
AluBI	AGCT	7 cut(s)	43, 227, 379, 469, 590, 687, 1015
AluI	AGCT	7 cut(s)	43, 227, 379, 469, 590, 687, 1015
Alw21I	GWGCWC	1 cut(s)	754
Alw26I	GTCTC	2 cut(s)	87, 600
AlwI	GGATC	2 cut(s)	247, 1532
Ama87I	CYCGRG	1 cut(s)	671
AoxI	GGCC	6 cut(s)	100, 516, 766, 884, 1040, 1142
ApeKI	GCWGC	3 cut(s)	224, 1022, 1526
ApoI	RAATTY	3 cut(s)	289, 560, 728
AspLEI	GCGC	1 cut(s)	983
AspS9I	GGNCC	8 cut(s)	329, 502, 517, 767, 896, 968, 1142, 1348
AsuC2I	CCSGG	1 cut(s)	1584
AsuHPI	GGTGA	2 cut(s)	109, 1198
AvaI	CYCGRG	1 cut(s)	671
AvaII	GGWCC	5 cut(s)	329, 502, 896, 968, 1348
BarI	GAAGNNNNNNTAC	2 cut(s)	999, 1031
BbsI	GAAGAC	2 cut(s)	932, 1421
Bbv12I	GWGCWC	1 cut(s)	754
BbvI	GCAGC	3 cut(s)	236, 1034, 1538
BccI	CCATC	4 cut(s)	536, 1057, 1132, 1417
BceAI	ACGGC	2 cut(s)	758, 1541
BciT130I	CCWGG	3 cut(s)	855, 924, 1459
BciVI	GTATCC	1 cut(s)	1040
BclI	TGATCA	4 cut(s)	280, 681, 1240, 1303
BcnI	CCSGG	1 cut(s)	1584
BcoDI	GTCTC	2 cut(s)	87, 600
BfaI	CTAG	6 cut(s)	644, 837, 906, 978, 1044, 1490
BfmI	CTRYAG	1 cut(s)	108
BfoI	RGCGCY	1 cut(s)	984
BfuAI	ACCTGC	1 cut(s)	115
BfuI	GTATCC	1 cut(s)	1040
BisI	GCNGC	3 cut(s)	225, 1023, 1527
BlsI	GCNGC	3 cut(s)	226, 1024, 1528
BmcAI	AGTACT	1 cut(s)	302
Bme1390I	CCNGG	4 cut(s)	855, 924, 1459, 1584
Bme18I	GGWCC	5 cut(s)	329, 502, 896, 968, 1348
BmeT110I	CYCGRG	1 cut(s)	671
BmgBI	CACGTC	1 cut(s)	1518
BmgT120I	GGNCC	8 cut(s)	329, 502, 517, 767, 896, 968, 1142, 1348
BmiI	GGNNCC	3 cut(s)	264, 1143, 1350
BmrFI	CCNGG	4 cut(s)	855, 924, 1459, 1584
BmsI	GCATC	5 cut(s)	199, 519, 729, 1348, 1543
BpiI	GAAGAC	2 cut(s)	932, 1421
BplI	GAGNNNNNCTC	2 cut(s)	1040, 1072
Bpu10I	CCTNAGC	1 cut(s)	470
BpuEI	CTTGAG	4 cut(s)	425, 673, 1285, 1522
BpuMI	CCSGG	1 cut(s)	1584
BsaBI	GATNNNNATC	1 cut(s)	152
BsaHI	GRCGYC	1 cut(s)	829
BsaI	GGTCTC	2 cut(s)	87, 600
BsaJI	CCNNGG	7 cut(s)	97, 123, 311, 340, 774, 1457, 1582
BsaXI	ACNNNNNCTCC	2 cut(s)	741, 771
Bsc4I	CCNNNNNNNGG	5 cut(s)	163, 183, 525, 775, 893
Bse118I	RCCGGY	1 cut(s)	1025
Bse1I	ACTGG	2 cut(s)	177, 755
Bse8I	GATNNNNATC	1 cut(s)	152
BseBI	CCWGG	3 cut(s)	855, 924, 1459
BseDI	CCNNGG	7 cut(s)	97, 123, 311, 340, 774, 1457, 1582
BseGI	GGATG	5 cut(s)	214, 534, 863, 932, 1428
BseJI	GATNNNNATC	1 cut(s)	152
BseLI	CCNNNNNNNGG	5 cut(s)	163, 183, 525, 775, 893
BseMII	CTCAG	1 cut(s)	833
BseNI	ACTGG	2 cut(s)	177, 755
BseRI	GAGGAG	5 cut(s)	84, 105, 155, 176, 659
BseXI	GCAGC	3 cut(s)	236, 1034, 1538
Bsh1236I	CGCG	1 cut(s)	524
BshFI	GGCC	6 cut(s)	102, 518, 768, 886, 1042, 1144
BsiHKAI	GWGCWC	1 cut(s)	754
BsiHKCI	CYCGRG	1 cut(s)	671
BsiSI	CCGG	2 cut(s)	1026, 1584
BslFI	GGGAC	2 cut(s)	1334, 1440
BslI	CCNNNNNNNGG	5 cut(s)	163, 183, 525, 775, 893
BsmAI	GTCTC	2 cut(s)	87, 600
BsmFI	GGGAC	2 cut(s)	1334, 1440
BsnI	GGCC	6 cut(s)	102, 518, 768, 886, 1042, 1144
Bso31I	GGTCTC	2 cut(s)	87, 600
BsoBI	CYCGRG	1 cut(s)	671
Bsp1286I	GDGCHC	1 cut(s)	754
Bsp1407I	TGTACA	1 cut(s)	567
Bsp143I	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
Bsp19I	CCATGG	1 cut(s)	340
BspACI	CCGC	2 cut(s)	87, 1506
BspANI	GGCC	6 cut(s)	102, 518, 768, 886, 1042, 1144
BspCNI	CTCAG	1 cut(s)	834
BspFNI	CGCG	1 cut(s)	524
BspHI	TCATGA	2 cut(s)	1152, 1438
BspLI	GGNNCC	3 cut(s)	264, 1143, 1350
BspMAI	CTGCAG	1 cut(s)	112
BspMI	ACCTGC	1 cut(s)	115
BspPI	GGATC	2 cut(s)	247, 1532
BspTNI	GGTCTC	2 cut(s)	87, 600
BsrBI	CCGCTC	1 cut(s)	1506
BsrFI	RCCGGY	1 cut(s)	1025
BsrGI	TGTACA	1 cut(s)	567
BsrI	ACTGG	2 cut(s)	177, 755
BssAI	RCCGGY	1 cut(s)	1025
BssECI	CCNNGG	7 cut(s)	97, 123, 311, 340, 774, 1457, 1582
BssMI	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
BssNI	GRCGYC	1 cut(s)	829
BssT1I	CCWWGG	3 cut(s)	97, 311, 340
Bst2UI	CCWGG	3 cut(s)	855, 924, 1459
Bst6I	CTCTTC	1 cut(s)	1328
BstACI	GRCGYC	1 cut(s)	829
BstAUI	TGTACA	1 cut(s)	567
BstC8I	GCNNGC	2 cut(s)	85, 363
BstDEI	CTNAG	3 cut(s)	470, 842, 1146
BstDSI	CCRYGG	3 cut(s)	123, 340, 774
BstEII	GGTNACC	1 cut(s)	1204
BstF5I	GGATG	5 cut(s)	214, 534, 863, 932, 1428
BstFNI	CGCG	1 cut(s)	524
BstH2I	RGCGCY	1 cut(s)	984
BstHHI	GCGC	1 cut(s)	983
BstKTI	GATC	7 cut(s)	255, 283, 600, 684, 1243, 1306, 1540
BstMAI	GTCTC	2 cut(s)	87, 600
BstMBI	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
BstMWI	GCNNNNNNNGC	1 cut(s)	224
BstNI	CCWGG	3 cut(s)	855, 924, 1459
BstNSI	RCATGY	1 cut(s)	637
BstPI	GGTNACC	1 cut(s)	1204
BstSCI	CCNGG	4 cut(s)	853, 922, 1457, 1582
BstSFI	CTRYAG	1 cut(s)	108
BstUI	CGCG	1 cut(s)	524
BstV1I	GCAGC	3 cut(s)	236, 1034, 1538
BstV2I	GAAGAC	2 cut(s)	932, 1421
BstX2I	RGATCY	1 cut(s)	252
BstYI	RGATCY	1 cut(s)	252
BsuI	GTATCC	1 cut(s)	1040
BsuRI	GGCC	6 cut(s)	102, 518, 768, 886, 1042, 1144
BtgI	CCRYGG	3 cut(s)	123, 340, 774
BtrI	CACGTC	1 cut(s)	1518
BtsCI	GGATG	5 cut(s)	214, 534, 863, 932, 1428
BtsIMutI	CAGTG	1 cut(s)	1338
BveI	ACCTGC	1 cut(s)	115
Cac8I	GCNNGC	2 cut(s)	85, 363
CciI	TCATGA	2 cut(s)	1152, 1438
CfoI	GCGC	1 cut(s)	983
Cfr10I	RCCGGY	1 cut(s)	1025
Cfr13I	GGNCC	8 cut(s)	329, 502, 517, 767, 896, 968, 1142, 1348
Csp6I	GTAC	9 cut(s)	301, 355, 568, 846, 861, 915, 930, 1007, 1567
CviQI	GTAC	9 cut(s)	301, 355, 568, 846, 861, 915, 930, 1007, 1567
DdeI	CTNAG	3 cut(s)	470, 842, 1146
DpnI	GATC	7 cut(s)	254, 282, 599, 683, 1242, 1305, 1539
DpnII	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
EaeI	YGGCCR	1 cut(s)	884
Eam1104I	CTCTTC	1 cut(s)	1328
EarI	CTCTTC	1 cut(s)	1328
Eco130I	CCWWGG	3 cut(s)	97, 311, 340
Eco147I	AGGCCT	1 cut(s)	1042
Eco31I	GGTCTC	2 cut(s)	87, 600
Eco47I	GGWCC	5 cut(s)	329, 502, 896, 968, 1348
Eco57I	CTGAAG	3 cut(s)	120, 938, 1001
Eco88I	CYCGRG	1 cut(s)	671
Eco91I	GGTNACC	1 cut(s)	1204
EcoO109I	RGGNCCY	5 cut(s)	517, 767, 896, 968, 1142
EcoO65I	GGTNACC	1 cut(s)	1204
EcoRI	GAATTC	1 cut(s)	560
EcoRII	CCWGG	3 cut(s)	853, 922, 1457
EcoT14I	CCWWGG	3 cut(s)	97, 311, 340
EcoT22I	ATGCAT	2 cut(s)	214, 744
ErhI	CCWWGG	3 cut(s)	97, 311, 340
FalI	AAGNNNNNCTT	2 cut(s)	363, 395
FaqI	GGGAC	2 cut(s)	1334, 1440
FbaI	TGATCA	4 cut(s)	280, 681, 1240, 1303
Fnu4HI	GCNGC	3 cut(s)	225, 1023, 1527
FokI	GGATG	5 cut(s)	221, 541, 870, 939, 1435
Fsp4HI	GCNGC	3 cut(s)	225, 1023, 1527
FspBI	CTAG	6 cut(s)	644, 837, 906, 978, 1044, 1490
GlaI	GCGC	1 cut(s)	982
GluI	GCNGC	3 cut(s)	225, 1023, 1527
HaeII	RGCGCY	1 cut(s)	984
HaeIII	GGCC	6 cut(s)	102, 518, 768, 886, 1042, 1144
HapII	CCGG	2 cut(s)	1026, 1584
HhaI	GCGC	1 cut(s)	983
Hin1I	GRCGYC	1 cut(s)	829
Hin6I	GCGC	1 cut(s)	981
HinP1I	GCGC	1 cut(s)	981
HincII	GTYRAC	1 cut(s)	1129
HindII	GTYRAC	1 cut(s)	1129
HindIII	AAGCTT	2 cut(s)	377, 588
HinfI	GANTC	3 cut(s)	1101, 1133, 1229
HpaII	CCGG	2 cut(s)	1026, 1584
HphI	GGTGA	2 cut(s)	109, 1198
Hpy166II	GTNNAC	4 cut(s)	77, 706, 833, 1129
Hpy188I	TCNGA	4 cut(s)	139, 813, 957, 1537
Hpy8I	GTNNAC	4 cut(s)	77, 706, 833, 1129
Hpy99I	CGWCG	1 cut(s)	556
HpyAV	CCTTC	5 cut(s)	31, 277, 815, 890, 959
HpyCH4IV	ACGT	7 cut(s)	434, 447, 554, 700, 829, 1005, 1517
HpyCH4V	TGCA	7 cut(s)	110, 212, 742, 1247, 1513, 1526, 1563
HpyF10VI	GCNNNNNNNGC	1 cut(s)	224
HpyF3I	CTNAG	3 cut(s)	470, 842, 1146
HpySE526I	ACGT	7 cut(s)	434, 447, 554, 700, 829, 1005, 1517
Hsp92I	GRCGYC	1 cut(s)	829
HspAI	GCGC	1 cut(s)	981
Ksp22I	TGATCA	4 cut(s)	280, 681, 1240, 1303
Kzo9I	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
LmnI	GCTCC	5 cut(s)	40, 127, 279, 466, 749
Lsp1109I	GCAGC	3 cut(s)	236, 1034, 1538
LweI	GCATC	5 cut(s)	199, 519, 729, 1348, 1543
MaeI	CTAG	6 cut(s)	644, 837, 906, 978, 1044, 1490
MaeII	ACGT	7 cut(s)	434, 447, 554, 700, 829, 1005, 1517
MaeIII	GTNAC	2 cut(s)	1204, 1375
MalI	GATC	7 cut(s)	254, 282, 599, 683, 1242, 1305, 1539
MbiI	CCGCTC	1 cut(s)	1506
MboI	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
MboII	GAAGA	8 cut(s)	46, 788, 800, 932, 944, 1103, 1315, 1426
MfeI	CAATTG	1 cut(s)	383
MflI	RGATCY	1 cut(s)	252
MhlI	GDGCHC	1 cut(s)	754
MluCI	AATT	5 cut(s)	289, 383, 560, 728, 1430
MlyI	GAGTC	1 cut(s)	1127
MmeI	TCCRAC	2 cut(s)	537, 564
Mph1103I	ATGCAT	2 cut(s)	214, 744
MseI	TTAA	3 cut(s)	462, 594, 1077
MslI	CAYNNNNRTG	1 cut(s)	510
MspI	CCGG	2 cut(s)	1026, 1584
MspR9I	CCNGG	4 cut(s)	855, 924, 1459, 1584
MunI	CAATTG	1 cut(s)	383
MvaI	CCWGG	3 cut(s)	855, 924, 1459
MvnI	CGCG	1 cut(s)	524
MwoI	GCNNNNNNNGC	1 cut(s)	224
NciI	CCSGG	1 cut(s)	1584
NcoI	CCATGG	1 cut(s)	340
NdeII	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
NlaIV	GGNNCC	3 cut(s)	264, 1143, 1350
NmuCI	GTSAC	1 cut(s)	1204
NsiI	ATGCAT	2 cut(s)	214, 744
NspI	RCATGY	1 cut(s)	637
PaeR7I	CTCGAG	1 cut(s)	671
PagI	TCATGA	2 cut(s)	1152, 1438
PceI	AGGCCT	1 cut(s)	1042
PciI	ACATGT	1 cut(s)	633
PcsI	WCGNNNNNNNCGW	1 cut(s)	59
PfeI	GAWTC	2 cut(s)	1101, 1229
PflFI	GACNNNGTC	1 cut(s)	1346
PkrI	GCNGC	3 cut(s)	226, 1024, 1528
PleI	GAGTC	1 cut(s)	1127
PpsI	GAGTC	1 cut(s)	1127
PpuMI	RGGWCCY	2 cut(s)	896, 968
PscI	ACATGT	1 cut(s)	633
Psp1406I	AACGTT	2 cut(s)	434, 447
Psp5II	RGGWCCY	2 cut(s)	896, 968
Psp6I	CCWGG	3 cut(s)	853, 922, 1457
PspEI	GGTNACC	1 cut(s)	1204
PspGI	CCWGG	3 cut(s)	853, 922, 1457
PspN4I	GGNNCC	3 cut(s)	264, 1143, 1350
PspPI	GGNCC	8 cut(s)	329, 502, 517, 767, 896, 968, 1142, 1348
PspPPI	RGGWCCY	2 cut(s)	896, 968
PspXI	VCTCGAGB	1 cut(s)	671
PstI	CTGCAG	1 cut(s)	112
PsuI	RGATCY	1 cut(s)	252
PsyI	GACNNNGTC	1 cut(s)	1346
RsaI	GTAC	9 cut(s)	302, 356, 569, 847, 862, 916, 931, 1008, 1568
RsaNI	GTAC	9 cut(s)	301, 355, 568, 846, 861, 915, 930, 1007, 1567
RseI	CAYNNNNRTG	1 cut(s)	510
SaqAI	TTAA	3 cut(s)	462, 594, 1077
SatI	GCNGC	3 cut(s)	225, 1023, 1527
Sau3AI	GATC	7 cut(s)	252, 280, 597, 681, 1240, 1303, 1537
Sau96I	GGNCC	8 cut(s)	329, 502, 517, 767, 896, 968, 1142, 1348
ScaI	AGTACT	1 cut(s)	302
SchI	GAGTC	1 cut(s)	1127
ScrFI	CCNGG	4 cut(s)	855, 924, 1459, 1584
SduI	GDGCHC	1 cut(s)	754
SfaNI	GCATC	5 cut(s)	199, 519, 729, 1348, 1543
SfcI	CTRYAG	1 cut(s)	108
Sfr274I	CTCGAG	1 cut(s)	671
SinI	GGWCC	5 cut(s)	329, 502, 896, 968, 1348
SlaI	CTCGAG	1 cut(s)	671
SmiMI	CAYNNNNRTG	1 cut(s)	510
SmlI	CTYRAG	5 cut(s)	440, 671, 688, 1264, 1501
SmoI	CTYRAG	5 cut(s)	440, 671, 688, 1264, 1501
Sse9I	AATT	5 cut(s)	289, 383, 560, 728, 1430
SseBI	AGGCCT	1 cut(s)	1042
SsiI	CCGC	2 cut(s)	87, 1506
SspMI	CTAG	6 cut(s)	644, 837, 906, 978, 1044, 1490
StuI	AGGCCT	1 cut(s)	1042
StyD4I	CCNGG	4 cut(s)	853, 922, 1457, 1582
StyI	CCWWGG	3 cut(s)	97, 311, 340
TaiI	ACGT	7 cut(s)	437, 450, 557, 703, 832, 1008, 1520
TaqI	TCGA	7 cut(s)	551, 672, 723, 901, 973, 1136, 1227
TaqII	GACCGA	1 cut(s)	317
TasI	AATT	5 cut(s)	289, 383, 560, 728, 1430
TatI	WGTACW	7 cut(s)	300, 354, 567, 845, 860, 914, 929
TfiI	GAWTC	2 cut(s)	1101, 1229
Tru1I	TTAA	3 cut(s)	462, 594, 1077
Tru9I	TTAA	3 cut(s)	462, 594, 1077
TscAI	CASTG	1 cut(s)	1345
TseFI	GTSAC	1 cut(s)	1204
TseI	GCWGC	3 cut(s)	224, 1022, 1526
Tsp45I	GTSAC	1 cut(s)	1204
TspGWI	ACGGA	2 cut(s)	140, 266
TspRI	CASTG	1 cut(s)	1345
Tth111I	GACNNNGTC	1 cut(s)	1346
VpaK11BI	GGWCC	5 cut(s)	329, 502, 896, 968, 1348
XapI	RAATTY	3 cut(s)	289, 560, 728
XceI	RCATGY	1 cut(s)	637
XhoI	CTCGAG	1 cut(s)	671
XspI	CTAG	6 cut(s)	644, 837, 906, 978, 1044, 1490
ZraI	GACGTC	1 cut(s)	830
ZrmI	AGTACT	1 cut(s)	302
Zsp2I	ATGCAT	2 cut(s)	214, 744

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.