pycom14g07360

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0001605
Physical Location & Seq
Reverse (-)
7430828 .. 7432048
1221 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g07360.1

Sequence Viewer

Length: 1221 bp
ATGTTGACAAAAAGATTTCTTGATTACACTGAGCAAAAAGCTGAAGATGTGCATCATAAGATTGAGGAGAGGATCAAAGAACTAAAGGACTGTTACACTGAGGAAGCGACACAGCGCTATGATGATGAGGCCCTCGCTTGGATGTTGTTCTTAGATGGGTGTTCAACCTTACAATTCATACAGTCCTTTGTGGATGAAAAGTTGGAAGAATTGTCGATCAAAAGGGACCTGATAGCCTTTGCACAGCAGGACTTGTTCTTGCTAGAGAACCAAGTCCCTTGTCAAGTCCTCGAGCTGTTGATGAGCTCAAGCAACAAACGCGGGAGGTTGAAGAAGTCGATCGAGACTTACGTTCAGGCGAACATTGGTGCACCTGGAAAGAAGCACTCAAAAGAGCCGGAACAGAAGCAACCAAACGTAGCAATAACCATGGAAAAAGAGCCCGCTCATCTTCTTGACCTTCTCCGAACAAAAATGATAGGTACAGAAAAAAATTCCGATAATCGAGATAAAGACCACTCCGTACAATCTTTTCTCACTCGTCTTCTTGACCTTCTCCGAATAAGAATGCTACGTCCACCAAAAAATTCCAATAAGCAAGTTACAGAAGACTCCATGCAATCTTTTCGCAATGTACAAGAGCTTAATGCAGCCGGGATCGATTTTACGGTTAGTGACAGTAGCTCTTTGGGGGACATATCTTTTAATTCTCATTGCTTTGCAGGACTACTCTGTCTTCCTGCAATATCAGTAGATGACTCAACAGGGCCTAAGTTCATGAATCTGATAGCATATGAAATGTGTCATGATTTCCAGAATGATTTTGCGGTCACCTCTTACATCAGCTTCCTTGATGCACTCATTGATCATGCAGATGATGTTAAGAAGCTAAGGTCAGCCGGTGTACTTTACAACTTACTGGGGAGTGATAAGGAGGTGGCTCAGCTCTTTAATGAGATTGGCACTGACTTGGTCCCTAACACTGACATATACCGCGATGTCAAAGCCAAAATAGAAAAACACTACAAAACCAAGTGGAAGACCTGGATGTCTCAATTCTGTCACGATCCTTTCAGTAGCCCCTGGACTTTCCTGGTTTTCGTGGGTGTTCTAGCAGCACTTGTGTTAACCGGCATCCAGACTTGGTTTGCAGTCTATTCTCCACCGTCTCCCTGTGATGTCGTATGCCAGAACTTGAAAATGTGGTGGAACCTTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

407

Amino Acids

46.5

Weight (kDa)

5.56

Isoelectric Point (pI)

47.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 3 - 376 2.3e-80 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 732, 1048
AccBSI CCGCTC 1 cut(s) 446
AccII CGCG 2 cut(s) 321, 996
AciI CCGC 4 cut(s) 321, 444, 827, 994
AclWI GGATC 3 cut(s) 80, 665, 1061
AcsI RAATTY 2 cut(s) 493, 586
AcuI CTGAAG 1 cut(s) 63
AfaI GTAC 4 cut(s) 484, 525, 636, 906
AfeI AGCGCT 1 cut(s) 116
AfiI CCNNNNNNNGG 1 cut(s) 138
AflII CTTAAG 1 cut(s) 1214
AgsI TTSAA 3 cut(s) 165, 331, 1198
AjnI CCWGG 4 cut(s) 373, 1043, 1082, 1092
AluBI AGCT 8 cut(s) 41, 295, 306, 643, 684, 846, 889, 946
AluI AGCT 8 cut(s) 41, 295, 306, 643, 684, 846, 889, 946
Alw21I GWGCWC 2 cut(s) 308, 373
Alw26I GTCTC 3 cut(s) 338, 1056, 1173
Alw44I GTGCAC 1 cut(s) 369
AlwI GGATC 3 cut(s) 80, 665, 1061
Ama87I CYCGRG 1 cut(s) 290
Aor51HI AGCGCT 1 cut(s) 116
AoxI GGCC 2 cut(s) 129, 767
ApaLI GTGCAC 1 cut(s) 369
ApeKI GCWGC 2 cut(s) 650, 1115
ApoI RAATTY 2 cut(s) 493, 586
AspLEI GCGC 1 cut(s) 117
AspS9I GGNCC 4 cut(s) 130, 226, 767, 973
AsuC2I CCSGG 1 cut(s) 655
AsuHPI GGTGA 1 cut(s) 823
AvaI CYCGRG 1 cut(s) 290
AvaII GGWCC 2 cut(s) 226, 973
BaeGI GKGCMC 1 cut(s) 373
BanII GRGCYC 2 cut(s) 308, 444
BbsI GAAGAC 4 cut(s) 536, 615, 728, 1046
Bbv12I GWGCWC 2 cut(s) 308, 373
BbvI GCAGC 2 cut(s) 662, 1127
BccI CCATC 1 cut(s) 149
BcgI CGANNNNNNTGC 2 cut(s) 608, 642
BciT130I CCWGG 4 cut(s) 375, 1045, 1084, 1094
BclI TGATCA 1 cut(s) 865
BcnI CCSGG 1 cut(s) 655
BcoDI GTCTC 3 cut(s) 338, 1056, 1173
BfaI CTAG 2 cut(s) 263, 1112
BfoI RGCGCY 1 cut(s) 118
BfrI CTTAAG 1 cut(s) 1214
BisI GCNGC 2 cut(s) 651, 1116
BlpI GCTNAGC 1 cut(s) 942
BlsI GCNGC 2 cut(s) 652, 1117
Bme1390I CCNGG 5 cut(s) 375, 655, 1045, 1084, 1094
Bme18I GGWCC 2 cut(s) 226, 973
BmeT110I CYCGRG 1 cut(s) 290
BmgT120I GGNCC 4 cut(s) 130, 226, 767, 973
BmiI GGNNCC 3 cut(s) 227, 975, 1211
BmrFI CCNGG 5 cut(s) 375, 655, 1045, 1084, 1094
BmrI ACTGGG 1 cut(s) 929
BmsI GCATC 3 cut(s) 61, 844, 1143
BmuI ACTGGG 1 cut(s) 929
BpiI GAAGAC 4 cut(s) 536, 615, 728, 1046
Bpu10I CCTNAGC 1 cut(s) 890
Bpu1102I GCTNAGC 1 cut(s) 942
BpuEI CTTGAG 1 cut(s) 292
BpuMI CCSGG 1 cut(s) 655
Bsa29I ATCGAT 1 cut(s) 660
BsaBI GATNNNNATC 1 cut(s) 51
BsaJI CCNNGG 2 cut(s) 429, 1082
Bsc4I CCNNNNNNNGG 1 cut(s) 138
Bse118I RCCGGY 2 cut(s) 899, 1130
Bse1I ACTGG 1 cut(s) 924
Bse3DI GCAATG 2 cut(s) 637, 712
Bse8I GATNNNNATC 1 cut(s) 51
BseBI CCWGG 4 cut(s) 375, 1045, 1084, 1094
BseCI ATCGAT 1 cut(s) 660
BseDI CCNNGG 2 cut(s) 429, 1082
BseGI GGATG 4 cut(s) 147, 199, 1053, 1134
BseJI GATNNNNATC 1 cut(s) 51
BseLI CCNNNNNNNGG 1 cut(s) 138
BseMI GCAATG 2 cut(s) 637, 712
BseMII CTCAG 3 cut(s) 21, 90, 956
BseNI ACTGG 1 cut(s) 924
BseRI GAGGAG 1 cut(s) 80
BseSI GKGCMC 1 cut(s) 373
BseXI GCAGC 2 cut(s) 662, 1127
Bsh1236I CGCG 2 cut(s) 321, 996
Bsh1285I CGRYCG 1 cut(s) 342
BshFI GGCC 2 cut(s) 131, 769
BshVI ATCGAT 1 cut(s) 660
BsiEI CGRYCG 1 cut(s) 342
BsiHKAI GWGCWC 2 cut(s) 308, 373
BsiHKCI CYCGRG 1 cut(s) 290
BsiSI CCGG 4 cut(s) 398, 654, 900, 1131
BslFI GGGAC 4 cut(s) 239, 260, 707, 959
BslI CCNNNNNNNGG 1 cut(s) 138
BsmAI GTCTC 3 cut(s) 338, 1056, 1173
BsmBI CGTCTC 1 cut(s) 1173
BsmFI GGGAC 4 cut(s) 239, 260, 707, 959
BsmI GAATGC 1 cut(s) 573
BsnI GGCC 2 cut(s) 131, 769
BsoBI CYCGRG 1 cut(s) 290
Bsp1286I GDGCHC 3 cut(s) 308, 373, 444
Bsp1407I TGTACA 1 cut(s) 634
Bsp143I GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
Bsp1720I GCTNAGC 1 cut(s) 942
Bsp19I CCATGG 1 cut(s) 429
BspACI CCGC 4 cut(s) 321, 444, 827, 994
BspANI GGCC 2 cut(s) 131, 769
BspCNI CTCAG 3 cut(s) 22, 91, 955
BspDI ATCGAT 1 cut(s) 660
BspFNI CGCG 2 cut(s) 321, 996
BspHI TCATGA 2 cut(s) 777, 805
BspLI GGNNCC 3 cut(s) 227, 975, 1211
BspPI GGATC 3 cut(s) 80, 665, 1061
BspTI CTTAAG 1 cut(s) 1214
BsrBI CCGCTC 1 cut(s) 446
BsrDI GCAATG 2 cut(s) 637, 712
BsrFI RCCGGY 2 cut(s) 899, 1130
BsrGI TGTACA 1 cut(s) 634
BsrI ACTGG 1 cut(s) 924
BssAI RCCGGY 2 cut(s) 899, 1130
BssECI CCNNGG 2 cut(s) 429, 1082
BssMI GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
BssT1I CCWWGG 1 cut(s) 429
Bst2UI CCWGG 4 cut(s) 375, 1045, 1084, 1094
Bst4CI ACNGT 5 cut(s) 92, 183, 670, 680, 1167
BstAFI CTTAAG 1 cut(s) 1214
BstAUI TGTACA 1 cut(s) 634
BstC8I GCNNGC 1 cut(s) 444
BstDEI CTNAG 6 cut(s) 30, 99, 151, 771, 890, 942
BstDSI CCRYGG 1 cut(s) 429
BstEII GGTNACC 1 cut(s) 829
BstF5I GGATG 4 cut(s) 147, 199, 1053, 1134
BstFNI CGCG 2 cut(s) 321, 996
BstH2I RGCGCY 1 cut(s) 118
BstHHI GCGC 1 cut(s) 117
BstKTI GATC 6 cut(s) 75, 219, 342, 660, 868, 1069
BstMAI GTCTC 3 cut(s) 338, 1056, 1173
BstMBI GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
BstMCI CGRYCG 1 cut(s) 342
BstMWI GCNNNNNNNGC 1 cut(s) 318
BstNI CCWGG 4 cut(s) 375, 1045, 1084, 1094
BstPI GGTNACC 1 cut(s) 829
BstSCI CCNGG 5 cut(s) 373, 653, 1043, 1082, 1092
BstSLI GKGCMC 1 cut(s) 373
BstUI CGCG 2 cut(s) 321, 996
BstV1I GCAGC 2 cut(s) 662, 1127
BstV2I GAAGAC 4 cut(s) 536, 615, 728, 1046
Bsu15I ATCGAT 1 cut(s) 660
BsuRI GGCC 2 cut(s) 131, 769
BsuTUI ATCGAT 1 cut(s) 660
BtgI CCRYGG 1 cut(s) 429
BtgZI GCGATG 1 cut(s) 1011
BtsCI GGATG 4 cut(s) 147, 199, 1053, 1134
BtsIMutI CAGTG 4 cut(s) 27, 96, 963, 981
Cac8I GCNNGC 1 cut(s) 444
CciI TCATGA 2 cut(s) 777, 805
CfoI GCGC 1 cut(s) 117
Cfr10I RCCGGY 2 cut(s) 899, 1130
Cfr13I GGNCC 4 cut(s) 130, 226, 767, 973
ClaI ATCGAT 1 cut(s) 660
Csp6I GTAC 4 cut(s) 483, 524, 635, 905
CviAII CATG 5 cut(s) 430, 616, 778, 806, 869
CviQI GTAC 4 cut(s) 483, 524, 635, 905
DdeI CTNAG 6 cut(s) 30, 99, 151, 771, 890, 942
DpnI GATC 6 cut(s) 74, 218, 341, 659, 867, 1068
DpnII GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
DrdI GACNNNNNNGTC 2 cut(s) 732, 1048
DseDI GACNNNNNNGTC 2 cut(s) 732, 1048
Ecl136II GAGCTC 1 cut(s) 306
Eco130I CCWWGG 1 cut(s) 429
Eco24I GRGCYC 2 cut(s) 308, 444
Eco47I GGWCC 2 cut(s) 226, 973
Eco47III AGCGCT 1 cut(s) 116
Eco53kI GAGCTC 1 cut(s) 306
Eco57I CTGAAG 1 cut(s) 63
Eco88I CYCGRG 1 cut(s) 290
Eco91I GGTNACC 1 cut(s) 829
EcoICRI GAGCTC 1 cut(s) 306
EcoO109I RGGNCCY 3 cut(s) 130, 226, 767
EcoO65I GGTNACC 1 cut(s) 829
EcoRII CCWGG 4 cut(s) 373, 1043, 1082, 1092
EcoT14I CCWWGG 1 cut(s) 429
EcoT38I GRGCYC 2 cut(s) 308, 444
ErhI CCWWGG 1 cut(s) 429
Esp3I CGTCTC 1 cut(s) 1173
FaeI CATG 5 cut(s) 433, 619, 781, 809, 872
FaqI GGGAC 4 cut(s) 239, 260, 707, 959
FatI CATG 5 cut(s) 429, 615, 777, 805, 868
FauI CCCGC 2 cut(s) 314, 451
FauNDI CATATG 1 cut(s) 793
FbaI TGATCA 1 cut(s) 865
Fnu4HI GCNGC 2 cut(s) 651, 1116
FokI GGATG 4 cut(s) 154, 206, 1060, 1121
FriOI GRGCYC 2 cut(s) 308, 444
Fsp4HI GCNGC 2 cut(s) 651, 1116
FspBI CTAG 2 cut(s) 263, 1112
GlaI GCGC 1 cut(s) 116
GluI GCNGC 2 cut(s) 651, 1116
HaeII RGCGCY 1 cut(s) 118
HaeIII GGCC 2 cut(s) 131, 769
HapII CCGG 4 cut(s) 398, 654, 900, 1131
HhaI GCGC 1 cut(s) 117
Hin1II CATG 5 cut(s) 433, 619, 781, 809, 872
Hin6I GCGC 1 cut(s) 115
HinP1I GCGC 1 cut(s) 115
HincII GTYRAC 2 cut(s) 6, 1128
HindII GTYRAC 2 cut(s) 6, 1128
HinfI GANTC 3 cut(s) 611, 758, 781
HpaI GTTAAC 1 cut(s) 1128
HpaII CCGG 4 cut(s) 398, 654, 900, 1131
HphI GGTGA 1 cut(s) 823
Hpy166II GTNNAC 5 cut(s) 6, 371, 578, 905, 1128
Hpy188I TCNGA 4 cut(s) 467, 499, 560, 786
Hpy8I GTNNAC 5 cut(s) 6, 371, 578, 905, 1128
HpyAV CCTTC 2 cut(s) 470, 563
HpyCH4III ACNGT 5 cut(s) 92, 183, 670, 680, 1167
HpyCH4IV ACGT 3 cut(s) 351, 417, 574
HpyF10VI GCNNNNNNNGC 1 cut(s) 318
HpyF3I CTNAG 6 cut(s) 30, 99, 151, 771, 890, 942
HpySE526I ACGT 3 cut(s) 351, 417, 574
Hsp92II CATG 5 cut(s) 433, 619, 781, 809, 872
HspAI GCGC 1 cut(s) 115
Ksp22I TGATCA 1 cut(s) 865
KspAI GTTAAC 1 cut(s) 1128
Kzo9I GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
Lsp1109I GCAGC 2 cut(s) 662, 1127
LweI GCATC 3 cut(s) 61, 844, 1143
MaeI CTAG 2 cut(s) 263, 1112
MaeII ACGT 3 cut(s) 351, 417, 574
MaeIII GTNAC 5 cut(s) 92, 601, 674, 829, 1061
MalI GATC 6 cut(s) 74, 218, 341, 659, 867, 1068
MbiI CCGCTC 1 cut(s) 446
MboI GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
MboII GAAGA 8 cut(s) 56, 218, 343, 443, 536, 620, 728, 1051
MhlI GDGCHC 3 cut(s) 308, 373, 444
MluCI AATT 6 cut(s) 173, 209, 493, 586, 706, 1055
MlyI GAGTC 2 cut(s) 605, 752
MmeI TCCRAC 1 cut(s) 183
MnlI CCTC 9 cut(s) 58, 63, 94, 121, 143, 299, 318, 844, 928
MseI TTAA 6 cut(s) 645, 705, 882, 951, 1127, 1215
MslI CAYNNNNRTG 1 cut(s) 873
MspCI CTTAAG 1 cut(s) 1214
MspI CCGG 4 cut(s) 398, 654, 900, 1131
MspR9I CCNGG 5 cut(s) 375, 655, 1045, 1084, 1094
Mva1269I GAATGC 1 cut(s) 573
MvaI CCWGG 4 cut(s) 375, 1045, 1084, 1094
MvnI CGCG 2 cut(s) 321, 996
MwoI GCNNNNNNNGC 1 cut(s) 318
NciI CCSGG 1 cut(s) 655
NcoI CCATGG 1 cut(s) 429
NdeI CATATG 1 cut(s) 793
NdeII GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
NlaIII CATG 5 cut(s) 433, 619, 781, 809, 872
NlaIV GGNNCC 3 cut(s) 227, 975, 1211
NmuCI GTSAC 3 cut(s) 674, 829, 1061
PaeR7I CTCGAG 1 cut(s) 290
PagI TCATGA 2 cut(s) 777, 805
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 1 cut(s) 573
PfeI GAWTC 1 cut(s) 781
PflFI GACNNNGTC 1 cut(s) 971
PkrI GCNGC 2 cut(s) 652, 1117
Ple19I CGATCG 1 cut(s) 342
PleI GAGTC 2 cut(s) 605, 752
PpsI GAGTC 2 cut(s) 605, 752
PpuMI RGGWCCY 1 cut(s) 226
Psp124BI GAGCTC 1 cut(s) 308
Psp5II RGGWCCY 1 cut(s) 226
Psp6I CCWGG 4 cut(s) 373, 1043, 1082, 1092
PspEI GGTNACC 1 cut(s) 829
PspGI CCWGG 4 cut(s) 373, 1043, 1082, 1092
PspN4I GGNNCC 3 cut(s) 227, 975, 1211
PspPI GGNCC 4 cut(s) 130, 226, 767, 973
PspPPI RGGWCCY 1 cut(s) 226
PspXI VCTCGAGB 1 cut(s) 290
PsyI GACNNNGTC 1 cut(s) 971
PvuI CGATCG 1 cut(s) 342
RsaI GTAC 4 cut(s) 484, 525, 636, 906
RsaNI GTAC 4 cut(s) 483, 524, 635, 905
RseI CAYNNNNRTG 1 cut(s) 873
SacI GAGCTC 1 cut(s) 308
SaqAI TTAA 6 cut(s) 645, 705, 882, 951, 1127, 1215
SatI GCNGC 2 cut(s) 651, 1116
Sau3AI GATC 6 cut(s) 72, 216, 339, 657, 865, 1066
Sau96I GGNCC 4 cut(s) 130, 226, 767, 973
SchI GAGTC 2 cut(s) 605, 752
ScrFI CCNGG 5 cut(s) 375, 655, 1045, 1084, 1094
SduI GDGCHC 3 cut(s) 308, 373, 444
SfaNI GCATC 3 cut(s) 61, 844, 1143
Sfr274I CTCGAG 1 cut(s) 290
SinI GGWCC 2 cut(s) 226, 973
SlaI CTCGAG 1 cut(s) 290
SmiMI CAYNNNNRTG 1 cut(s) 873
SmlI CTYRAG 3 cut(s) 290, 307, 1214
SmoI CTYRAG 3 cut(s) 290, 307, 1214
Sse9I AATT 6 cut(s) 173, 209, 493, 586, 706, 1055
SsiI CCGC 4 cut(s) 321, 444, 827, 994
SspMI CTAG 2 cut(s) 263, 1112
SstI GAGCTC 1 cut(s) 308
StyD4I CCNGG 5 cut(s) 373, 653, 1043, 1082, 1092
StyI CCWWGG 1 cut(s) 429
TaaI ACNGT 5 cut(s) 92, 183, 670, 680, 1167
TaiI ACGT 3 cut(s) 354, 420, 577
TaqI TCGA 6 cut(s) 215, 291, 338, 342, 505, 660
TasI AATT 6 cut(s) 173, 209, 493, 586, 706, 1055
TatI WGTACW 2 cut(s) 634, 904
TfiI GAWTC 1 cut(s) 781
Tru1I TTAA 6 cut(s) 645, 705, 882, 951, 1127, 1215
Tru9I TTAA 6 cut(s) 645, 705, 882, 951, 1127, 1215
TscAI CASTG 4 cut(s) 34, 103, 970, 988
TseFI GTSAC 3 cut(s) 674, 829, 1061
TseI GCWGC 2 cut(s) 650, 1115
Tsp45I GTSAC 3 cut(s) 674, 829, 1061
TspDTI ATGAA 5 cut(s) 166, 210, 766, 794, 810
TspGWI ACGGA 1 cut(s) 511
TspRI CASTG 4 cut(s) 34, 103, 970, 988
Tth111I GACNNNGTC 1 cut(s) 971
Vha464I CTTAAG 1 cut(s) 1214
VneI GTGCAC 1 cut(s) 369
VpaK11BI GGWCC 2 cut(s) 226, 973
XapI RAATTY 2 cut(s) 493, 586
XhoI CTCGAG 1 cut(s) 290
XspI CTAG 2 cut(s) 263, 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.