Prupe.7G045700_v2.0.a1

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001605
Physical Location & Seq
Forward (+)
8160002 .. 8161391
1390 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G045700.1

Sequence Viewer

Length: 1206 bp
ATGGCTGATTTCACTTCAGTTAATGAACTGAGCATTAAAATGCTTGATTCTGTGGAGCAGGGAGTTGATAAACTGAGGGACGCAGAAAGAAGACTTCCAACTCCCGATGGCAATGACAATTCAGCTACAAGCAACAGCTCAAAATCAAAGATCCAAAGTGTTCCTAGAATTCTCCGAAGTCACAGTAATTTGGTGAAATGCTTTGAGCCAAGGGTACTAGCAATGGGTCAGATCCATCATGGTGAGTGCAAGGAAGCAGAGGAACTCAAATACACTTTGGCAGCAGACTTTATCAAGGATTGCGGCTGCACATATAACCATTTGTACGAGACGATTCAGAAAAACATCCTTAAAATTAAGGACTGCTACGATAGTGAAACAACAAAGTGCTACGATGATGATGAGGCACTCGCCTGGATGTTGTTTATAGATGGATGTTCAACCTTGCAATTCATACACAAATATGATTGCTTGGAAGATTTTGGGATGAAAGCAACCCAAGTGGCCTTTGCACGGCTGGACTTGTTCTTGCTAGAGAACCAACTCCCTTATCGAGTCCTCAAGCTGTTGAAGAGCACAAACTTTAAGTCATTGATGGATTTCGTTGACCAAAAAGAGAAGGAAATCAAGAATATGCTACGAAGGCGTCGTGGGGAGCTGAAATACAGTACTCATCTTCTTGATTTTCTTCGGAAAGAAATGCTAGGTCCATCAGAAGAGCTTAGCTATCGTGGTGGCAAAGAAGACTGTTCACCTTCGTTTCGCAATGTGCAGGAGCTTAAGGCAGCCGGGGTCCATTTTAGGCGCTTTCTTAGTCTTCCTCCCATAAACGAAGACGCAATGTCTTCGTTCTTGAATTTGATAGCCTACGAAATGTGTCCTGATTTCCGAAATGATTTCGCGGTCACCTCTTACTTCGGCTTCCTCAGTTCACTCATTGCTCATCCCGAAGATGCTAAGCAGCTAAGGTCAGCCCGCATACTTAGCAACTTGCGTGGGAGCGACGAAGCCCTCGCTGACTTCTTTCACGAGATAGGCCCTGATTTGCAACACTACAAAACCAAGTGGAAGGCATGGTTCGCTCAATTCTTGGAAGATCATTTCAGTAGCCCCTGGGCCATGCTTGCTTTCATTGGAGCTCTAATAGCGCTCATCTTAAGCGGCATCCAAACTTGGTACGCAGTCCTCAGTTTTTATCAGAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

402

Amino Acids

46.15

Weight (kDa)

6.04

Isoelectric Point (pI)

42.33

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 902
AciI CCGC 4 cut(s) 303, 902, 976, 1161
AclWI GGATC 2 cut(s) 145, 226
AcsI RAATTY 2 cut(s) 168, 856
AcyI GRCGYC 1 cut(s) 646
AfaI GTAC 4 cut(s) 216, 326, 670, 1178
AfeI AGCGCT 1 cut(s) 1149
AfiI CCNNNNNNNGG 1 cut(s) 513
AflII CTTAAG 2 cut(s) 779, 1156
AgsI TTSAA 3 cut(s) 441, 571, 856
AhdI GACNNNNNGTC 1 cut(s) 841
AjnI CCWGG 2 cut(s) 413, 1112
AluBI AGCT 9 cut(s) 125, 138, 565, 658, 721, 726, 778, 964, 1139
AluI AGCT 9 cut(s) 125, 138, 565, 658, 721, 726, 778, 964, 1139
Alw21I GWGCWC 2 cut(s) 578, 1141
Alw26I GTCTC 1 cut(s) 323
AlwI GGATC 2 cut(s) 145, 226
Aor51HI AGCGCT 1 cut(s) 1149
AoxI GGCC 3 cut(s) 504, 1036, 1116
ApeKI GCWGC 4 cut(s) 281, 306, 785, 961
ApoI RAATTY 2 cut(s) 168, 856
ArsI GACNNNNNNTTYG 2 cut(s) 572, 604
AspLEI GCGC 2 cut(s) 807, 1150
AspS9I GGNCC 4 cut(s) 707, 793, 1037, 1116
AsuC2I CCSGG 1 cut(s) 790
AsuHPI GGTGA 4 cut(s) 205, 254, 744, 898
AvaII GGWCC 2 cut(s) 707, 793
BanII GRGCYC 1 cut(s) 1141
BauI CACGAG 1 cut(s) 1028
BbsI GAAGAC 5 cut(s) 97, 750, 809, 837, 840
Bbv12I GWGCWC 2 cut(s) 578, 1141
BbvI GCAGC 4 cut(s) 293, 293, 797, 973
BccI CCATC 5 cut(s) 101, 243, 425, 589, 718
BceAI ACGGC 1 cut(s) 530
BcgI CGANNNNNNTGC 2 cut(s) 828, 862
BciT130I CCWGG 2 cut(s) 415, 1114
BcnI CCSGG 1 cut(s) 790
BcoDI GTCTC 1 cut(s) 323
BfaI CTAG 4 cut(s) 165, 218, 533, 704
BfoI RGCGCY 2 cut(s) 808, 1151
BfrI CTTAAG 2 cut(s) 779, 1156
BisI GCNGC 6 cut(s) 282, 304, 307, 786, 962, 1162
BlpI GCTNAGC 2 cut(s) 722, 957
BlsI GCNGC 6 cut(s) 283, 305, 308, 787, 963, 1163
BmcAI AGTACT 1 cut(s) 670
Bme1390I CCNGG 3 cut(s) 415, 790, 1114
Bme18I GGWCC 2 cut(s) 707, 793
BmeRI GACNNNNNGTC 1 cut(s) 841
BmgT120I GGNCC 4 cut(s) 707, 793, 1037, 1116
BmiI GGNNCC 1 cut(s) 794
BmrFI CCNGG 3 cut(s) 415, 790, 1114
BmsI GCATC 2 cut(s) 943, 1173
BpiI GAAGAC 5 cut(s) 97, 750, 809, 837, 840
Bpu10I CCTNAGC 1 cut(s) 965
Bpu1102I GCTNAGC 2 cut(s) 722, 957
BpuEI CTTGAG 1 cut(s) 545
BpuMI CCSGG 1 cut(s) 790
BsaHI GRCGYC 1 cut(s) 646
BsaJI CCNNGG 4 cut(s) 209, 789, 1112, 1113
Bsc4I CCNNNNNNNGG 1 cut(s) 513
Bse3DI GCAATG 5 cut(s) 118, 228, 772, 846, 936
BseBI CCWGG 2 cut(s) 415, 1114
BseDI CCNNGG 4 cut(s) 209, 789, 1112, 1113
BseGI GGATG 6 cut(s) 345, 423, 440, 492, 943, 1164
BseLI CCNNNNNNNGG 1 cut(s) 513
BseMI GCAATG 5 cut(s) 118, 228, 772, 846, 936
BseMII CTCAG 4 cut(s) 20, 65, 940, 1201
BseXI GCAGC 4 cut(s) 293, 293, 797, 973
BsgI GTGCAG 2 cut(s) 292, 791
Bsh1236I CGCG 1 cut(s) 902
BshFI GGCC 3 cut(s) 506, 1038, 1118
BsiHKAI GWGCWC 2 cut(s) 578, 1141
BsiSI CCGG 1 cut(s) 789
BslFI GGGAC 1 cut(s) 92
BslI CCNNNNNNNGG 1 cut(s) 513
BsmAI GTCTC 1 cut(s) 323
BsmBI CGTCTC 1 cut(s) 323
BsmFI GGGAC 1 cut(s) 92
BsnI GGCC 3 cut(s) 506, 1038, 1118
Bsp1286I GDGCHC 2 cut(s) 578, 1141
Bsp143I GATC 3 cut(s) 150, 231, 1096
Bsp1720I GCTNAGC 2 cut(s) 722, 957
BspACI CCGC 4 cut(s) 303, 902, 976, 1161
BspANI GGCC 3 cut(s) 506, 1038, 1118
BspCNI CTCAG 4 cut(s) 21, 66, 939, 1200
BspFNI CGCG 1 cut(s) 902
BspLI GGNNCC 1 cut(s) 794
BspPI GGATC 2 cut(s) 145, 226
BspQI GCTCTTC 2 cut(s) 566, 711
BspTI CTTAAG 2 cut(s) 779, 1156
BsrDI GCAATG 5 cut(s) 118, 228, 772, 846, 936
BssECI CCNNGG 4 cut(s) 209, 789, 1112, 1113
BssMI GATC 3 cut(s) 150, 231, 1096
BssNI GRCGYC 1 cut(s) 646
BssSI CACGAG 1 cut(s) 1028
BssT1I CCWWGG 1 cut(s) 209
Bst2BI CACGAG 1 cut(s) 1028
Bst2UI CCWGG 2 cut(s) 415, 1114
Bst4CI ACNGT 3 cut(s) 185, 668, 749
Bst6I CTCTTC 2 cut(s) 566, 711
BstACI GRCGYC 1 cut(s) 646
BstAFI CTTAAG 2 cut(s) 779, 1156
BstC8I GCNNGC 2 cut(s) 976, 1125
BstDEI CTNAG 9 cut(s) 29, 74, 722, 812, 926, 957, 965, 983, 1187
BstEII GGTNACC 1 cut(s) 904
BstF5I GGATG 6 cut(s) 345, 423, 440, 492, 943, 1164
BstFNI CGCG 1 cut(s) 902
BstH2I RGCGCY 2 cut(s) 808, 1151
BstHHI GCGC 2 cut(s) 807, 1150
BstKTI GATC 3 cut(s) 153, 234, 1099
BstMAI GTCTC 1 cut(s) 323
BstMBI GATC 3 cut(s) 150, 231, 1096
BstMWI GCNNNNNNNGC 5 cut(s) 643, 984, 1079, 1124, 1145
BstNI CCWGG 2 cut(s) 415, 1114
BstPI GGTNACC 1 cut(s) 904
BstSCI CCNGG 3 cut(s) 413, 788, 1112
BstUI CGCG 1 cut(s) 902
BstV1I GCAGC 4 cut(s) 293, 293, 797, 973
BstV2I GAAGAC 5 cut(s) 97, 750, 809, 837, 840
BstX2I RGATCY 2 cut(s) 150, 231
BstYI RGATCY 2 cut(s) 150, 231
BsuRI GGCC 3 cut(s) 506, 1038, 1118
BtsCI GGATG 6 cut(s) 345, 423, 440, 492, 943, 1164
Cac8I GCNNGC 2 cut(s) 976, 1125
CfoI GCGC 2 cut(s) 807, 1150
Cfr13I GGNCC 4 cut(s) 707, 793, 1037, 1116
CseI GACGC 3 cut(s) 89, 635, 845
Csp6I GTAC 4 cut(s) 215, 325, 669, 1177
CspCI CAANNNNNGTGG 4 cut(s) 483, 518, 976, 1011
CviAII CATG 3 cut(s) 239, 1074, 1120
CviQI GTAC 4 cut(s) 215, 325, 669, 1177
DdeI CTNAG 9 cut(s) 29, 74, 722, 812, 926, 957, 965, 983, 1187
DpnI GATC 3 cut(s) 152, 233, 1098
DpnII GATC 3 cut(s) 150, 231, 1096
DriI GACNNNNNGTC 1 cut(s) 841
Eam1104I CTCTTC 2 cut(s) 566, 711
Eam1105I GACNNNNNGTC 1 cut(s) 841
EarI CTCTTC 2 cut(s) 566, 711
Ecl136II GAGCTC 1 cut(s) 1139
Eco130I CCWWGG 1 cut(s) 209
Eco24I GRGCYC 1 cut(s) 1141
Eco47I GGWCC 2 cut(s) 707, 793
Eco47III AGCGCT 1 cut(s) 1149
Eco53kI GAGCTC 1 cut(s) 1139
Eco91I GGTNACC 1 cut(s) 904
EcoICRI GAGCTC 1 cut(s) 1139
EcoO109I RGGNCCY 1 cut(s) 1037
EcoO65I GGTNACC 1 cut(s) 904
EcoRI GAATTC 1 cut(s) 168
EcoRII CCWGG 2 cut(s) 413, 1112
EcoT14I CCWWGG 1 cut(s) 209
EcoT38I GRGCYC 1 cut(s) 1141
ErhI CCWWGG 1 cut(s) 209
Esp3I CGTCTC 1 cut(s) 323
FaeI CATG 3 cut(s) 242, 1077, 1123
FaqI GGGAC 1 cut(s) 92
FatI CATG 3 cut(s) 238, 1073, 1119
FauI CCCGC 1 cut(s) 983
Fnu4HI GCNGC 6 cut(s) 282, 304, 307, 786, 962, 1162
FokI GGATG 6 cut(s) 332, 430, 447, 499, 930, 1151
FriOI GRGCYC 1 cut(s) 1141
Fsp4HI GCNGC 6 cut(s) 282, 304, 307, 786, 962, 1162
FspBI CTAG 4 cut(s) 165, 218, 533, 704
GlaI GCGC 2 cut(s) 806, 1149
GluI GCNGC 6 cut(s) 282, 304, 307, 786, 962, 1162
HaeII RGCGCY 2 cut(s) 808, 1151
HaeIII GGCC 3 cut(s) 506, 1038, 1118
HapII CCGG 1 cut(s) 789
HgaI GACGC 3 cut(s) 89, 635, 845
HhaI GCGC 2 cut(s) 807, 1150
Hin1I GRCGYC 1 cut(s) 646
Hin1II CATG 3 cut(s) 242, 1077, 1123
Hin6I GCGC 2 cut(s) 805, 1148
HinP1I GCGC 2 cut(s) 805, 1148
HincII GTYRAC 1 cut(s) 607
HindII GTYRAC 1 cut(s) 607
HinfI GANTC 3 cut(s) 47, 334, 555
HpaII CCGG 1 cut(s) 789
HphI GGTGA 4 cut(s) 205, 254, 744, 898
Hpy166II GTNNAC 3 cut(s) 607, 752, 932
Hpy188I TCNGA 7 cut(s) 176, 231, 339, 693, 715, 890, 1200
Hpy188III TCNNGA 7 cut(s) 104, 628, 680, 853, 881, 947, 1028
Hpy8I GTNNAC 3 cut(s) 607, 752, 932
Hpy99I CGWCG 2 cut(s) 651, 1007
HpyAV CCTTC 4 cut(s) 613, 636, 765, 1063
HpyCH4III ACNGT 3 cut(s) 185, 668, 749
HpyCH4V TGCA 6 cut(s) 249, 309, 448, 512, 772, 1048
HpyF10VI GCNNNNNNNGC 5 cut(s) 643, 984, 1079, 1124, 1145
HpyF3I CTNAG 9 cut(s) 29, 74, 722, 812, 926, 957, 965, 983, 1187
Hsp92I GRCGYC 1 cut(s) 646
Hsp92II CATG 3 cut(s) 242, 1077, 1123
HspAI GCGC 2 cut(s) 805, 1148
Kzo9I GATC 3 cut(s) 150, 231, 1096
LguI GCTCTTC 2 cut(s) 566, 711
LmnI GCTCC 5 cut(s) 55, 655, 775, 999, 1136
Lsp1109I GCAGC 4 cut(s) 293, 293, 797, 973
LweI GCATC 2 cut(s) 943, 1173
MaeI CTAG 4 cut(s) 165, 218, 533, 704
MaeIII GTNAC 2 cut(s) 179, 904
MalI GATC 3 cut(s) 152, 233, 1098
MboI GATC 3 cut(s) 150, 231, 1096
MflI RGATCY 2 cut(s) 150, 231
MhlI GDGCHC 2 cut(s) 578, 1141
MluCI AATT 7 cut(s) 118, 168, 187, 354, 449, 856, 1085
MlyI GAGTC 1 cut(s) 564
MmeI TCCRAC 1 cut(s) 122
MnlI CCTC 9 cut(s) 69, 253, 397, 569, 831, 919, 935, 1022, 1196
MseI TTAA 7 cut(s) 21, 36, 351, 357, 585, 780, 1157
MslI CAYNNNNRTG 3 cut(s) 38, 240, 462
MspCI CTTAAG 2 cut(s) 779, 1156
MspI CCGG 1 cut(s) 789
MspR9I CCNGG 3 cut(s) 415, 790, 1114
MvaI CCWGG 2 cut(s) 415, 1114
MvnI CGCG 1 cut(s) 902
MwoI GCNNNNNNNGC 5 cut(s) 643, 984, 1079, 1124, 1145
NciI CCSGG 1 cut(s) 790
NdeII GATC 3 cut(s) 150, 231, 1096
NlaIII CATG 3 cut(s) 242, 1077, 1123
NlaIV GGNNCC 1 cut(s) 794
NmuCI GTSAC 2 cut(s) 179, 904
PasI CCCWGGG 1 cut(s) 1113
PciSI GCTCTTC 2 cut(s) 566, 711
PcsI WCGNNNNNNNCGW 1 cut(s) 646
PfeI GAWTC 2 cut(s) 47, 334
PkrI GCNGC 6 cut(s) 283, 305, 308, 787, 963, 1163
PleI GAGTC 1 cut(s) 563
PpsI GAGTC 1 cut(s) 563
Psp124BI GAGCTC 1 cut(s) 1141
Psp6I CCWGG 2 cut(s) 413, 1112
PspEI GGTNACC 1 cut(s) 904
PspGI CCWGG 2 cut(s) 413, 1112
PspN4I GGNNCC 1 cut(s) 794
PspPI GGNCC 4 cut(s) 707, 793, 1037, 1116
PsuI RGATCY 2 cut(s) 150, 231
RsaI GTAC 4 cut(s) 216, 326, 670, 1178
RsaNI GTAC 4 cut(s) 215, 325, 669, 1177
RseI CAYNNNNRTG 3 cut(s) 38, 240, 462
SacI GAGCTC 1 cut(s) 1141
SapI GCTCTTC 2 cut(s) 566, 711
SaqAI TTAA 7 cut(s) 21, 36, 351, 357, 585, 780, 1157
SatI GCNGC 6 cut(s) 282, 304, 307, 786, 962, 1162
Sau3AI GATC 3 cut(s) 150, 231, 1096
Sau96I GGNCC 4 cut(s) 707, 793, 1037, 1116
ScaI AGTACT 1 cut(s) 670
SchI GAGTC 1 cut(s) 564
ScrFI CCNGG 3 cut(s) 415, 790, 1114
SduI GDGCHC 2 cut(s) 578, 1141
SfaNI GCATC 2 cut(s) 943, 1173
SinI GGWCC 2 cut(s) 707, 793
SmiMI CAYNNNNRTG 3 cut(s) 38, 240, 462
SmlI CTYRAG 3 cut(s) 560, 779, 1156
SmoI CTYRAG 3 cut(s) 560, 779, 1156
Sse9I AATT 7 cut(s) 118, 168, 187, 354, 449, 856, 1085
SsiI CCGC 4 cut(s) 303, 902, 976, 1161
SspMI CTAG 4 cut(s) 165, 218, 533, 704
SstI GAGCTC 1 cut(s) 1141
StyD4I CCNGG 3 cut(s) 413, 788, 1112
StyI CCWWGG 1 cut(s) 209
TaaI ACNGT 3 cut(s) 185, 668, 749
TaqI TCGA 1 cut(s) 553
TasI AATT 7 cut(s) 118, 168, 187, 354, 449, 856, 1085
TatI WGTACW 1 cut(s) 668
TauI GCSGC 2 cut(s) 306, 1164
TfiI GAWTC 2 cut(s) 47, 334
Tru1I TTAA 7 cut(s) 21, 36, 351, 357, 585, 780, 1157
Tru9I TTAA 7 cut(s) 21, 36, 351, 357, 585, 780, 1157
TseFI GTSAC 2 cut(s) 179, 904
TseI GCWGC 4 cut(s) 281, 306, 785, 961
Tsp45I GTSAC 2 cut(s) 179, 904
TspDTI ATGAA 4 cut(s) 39, 442, 503, 1120
Vha464I CTTAAG 2 cut(s) 779, 1156
VpaK11BI GGWCC 2 cut(s) 707, 793
XapI RAATTY 2 cut(s) 168, 856
XspI CTAG 4 cut(s) 165, 218, 533, 704
ZrmI AGTACT 1 cut(s) 670
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.