Prupe.8G076000_v2.0.a1

UPF0481 protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
11024741 .. 11026575
1835 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G076000.1

Sequence Viewer

Length: 1416 bp
ATGGCCCAAAAAGATGAAAATGTGAGGCAAGTTACCAAAAGAGGAGGTGGACAAGGAAGCAGAGGAGACCAAGACCAACCTGCAGAAATTGAGGTGAGTATTACAATCCATGAGGAGGCAAGTCCCAGGGAGGAGAGACTCAACAAATTAAGGGAAGAAGCACCGCCAATTCAGGCTGAAAAGGTGAAACCAAAGATCCAAAAGGTTCCCTTCATGCTCCGACAAGACAAAAAATTCGACAAGTACTACGAGCCAATTGTTGCAGCACTCGGTCCCTTCCACCATGCTCGGTTGCCACAGTACGAGTATGCAGAGAAAATCAAGCTTAAATTAGCTGCAAACTTTGTCAGAGACAGTAAGCAGAATGATGCAGATCTGCTCAAGAAGGTTGAGGACAATATCAATGAACTAAGGAAGTGCTATGATGAGGAAGCAACAAAGAAATATGATGACGAATTCCTCGCGTGGATGTTGTTCGTTGATGGGTGCTCCACACTGGAATTCATATACAAATATGATGAATTAGAAAATTTTCAGATCAAGAGAGACCAGGTGGCCTTTGTAGAACATGACATATTCTTGCTGGAGAACCAACTTCCTTATCAACTCCTCCAGCTGTTGATGAGCTCGAGCCAAATACATAAGGAATTGAAGAAATCAATCGATGAGTTTGTTGGGAGAAACAGCCCTGCAGCAGCACCAGCAGATCAGAACGGACAAAATCCAGAAGCAGAAGAACAGAGGTCACAACCAGGACAAGAAGTAGAAGCAGAGCCAACTCATCTGCTCGAGCTTCTTCGGACAACAATGCTACCTTACGAAAGTGAGAAAAAAGAAGGTACTCAACGTTCCCACTCTTTTCGCAATGTGCAAGAGCTTCAGGCATCTGGGATCCATTTTAAACCTAGTGAGGGCAACTCATTGAGGAGCATATATTTTGGGTCTTTCCATCTATTCCATGGAATCCTTCATCTTCCTCAAATAAAAGTCGACGACTCGACCAGACCCAAGTTCATGAACTTGATAGCCTACGAAATGTGTCCCGATTTCCACAATGATTTCGGGGTCACATCTTACATATGCTTCCTCGATTCGCTCATCGATCAGCCCGATGATGTAAAGCATCTGAGGAAAAAGCAGATACTTCGAAACTTCCTTGGGAATGACGAGGAGGTGGCTCAGCTCTTCAATGAGATAGGCACTGACTTGGTGCCTAACAATGACATTTACTCCTCTGTTAAAGACCAAATAGAAGATCACTACGACAACTGGGGTAACAGAGTGATGGCTCAATTCTTTCACGAGCATTTCAGCAGCCCCTGGACTGGTATTGCTTTCCTTGGTGCTCTCCTAGCTCTTGGGTCGAGCATCGTTCAGACTGTTTACTCAGTCCTCGGTTATCATAGTAGTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

472

Amino Acids

54.29

Weight (kDa)

5.36

Isoelectric Point (pI)

46.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 88
AccB1I GGYRCC 1 cut(s) 1210
AccI GTMKAC 1 cut(s) 990
AccII CGCG 1 cut(s) 464
AciI CCGC 1 cut(s) 164
AclI AACGTT 1 cut(s) 847
AclWI GGATC 3 cut(s) 190, 886, 899
AcsI RAATTY 4 cut(s) 233, 455, 500, 529
AcuI CTGAAG 1 cut(s) 863
AfaI GTAC 3 cut(s) 245, 302, 841
AfiI CCNNNNNNNGG 3 cut(s) 115, 911, 1325
AgsI TTSAA 2 cut(s) 652, 1189
AjnI CCWGG 4 cut(s) 125, 549, 751, 1319
AluBI AGCT 8 cut(s) 325, 335, 616, 627, 793, 877, 1183, 1355
AluI AGCT 8 cut(s) 325, 335, 616, 627, 793, 877, 1183, 1355
Alw21I GWGCWC 3 cut(s) 491, 629, 1348
Alw26I GTCTC 4 cut(s) 60, 130, 345, 540
AlwI GGATC 3 cut(s) 190, 886, 899
AlwNI CAGNNNCTG 1 cut(s) 1320
Ama87I CYCGRG 2 cut(s) 628, 788
AoxI GGCC 2 cut(s) 3, 555
ApeKI GCWGC 5 cut(s) 263, 335, 692, 695, 1314
ApoI RAATTY 4 cut(s) 233, 455, 500, 529
ArsI GACNNNNNNTTYG 2 cut(s) 218, 250
Asp700I GAANNNNTTC 1 cut(s) 531
AspS9I GGNCC 2 cut(s) 4, 272
AsuHPI GGTGA 2 cut(s) 106, 196
AsuII TTCGAA 1 cut(s) 1147
AvaI CYCGRG 2 cut(s) 628, 788
AvaII GGWCC 1 cut(s) 272
BamHI GGATCC 1 cut(s) 891
BanI GGYRCC 1 cut(s) 1210
BanII GRGCYC 1 cut(s) 629
BauI CACGAG 1 cut(s) 1301
Bbv12I GWGCWC 3 cut(s) 491, 629, 1348
BbvI GCAGC 5 cut(s) 275, 322, 704, 707, 1326
BccI CCATC 3 cut(s) 476, 957, 1279
BcgI CGANNNNNNTGC 2 cut(s) 1127, 1161
BciT130I CCWGG 4 cut(s) 127, 551, 753, 1321
BcoDI GTCTC 4 cut(s) 60, 130, 345, 540
BfaI CTAG 2 cut(s) 906, 1352
BfmI CTRYAG 2 cut(s) 81, 690
BfuAI ACCTGC 1 cut(s) 88
BglII AGATCT 1 cut(s) 373
BisI GCNGC 5 cut(s) 264, 336, 693, 696, 1315
BlpI GCTNAGC 1 cut(s) 1179
BlsI GCNGC 5 cut(s) 265, 337, 694, 697, 1316
BmcAI AGTACT 1 cut(s) 245
Bme1390I CCNGG 4 cut(s) 127, 551, 753, 1321
Bme18I GGWCC 1 cut(s) 272
BmeT110I CYCGRG 2 cut(s) 628, 788
BmgT120I GGNCC 2 cut(s) 4, 272
BmiI GGNNCC 4 cut(s) 207, 274, 893, 1212
BmrFI CCNGG 4 cut(s) 127, 551, 753, 1321
BmrI ACTGGG 1 cut(s) 1279
BmsI GCATC 4 cut(s) 358, 893, 1132, 1377
BmuI ACTGGG 1 cut(s) 1279
BplI GAGNNNNNCTC 2 cut(s) 902, 934
BpmI CTGGAG 2 cut(s) 596, 605
Bpu1102I GCTNAGC 1 cut(s) 1179
Bpu14I TTCGAA 1 cut(s) 1147
BpuEI CTTGAG 1 cut(s) 365
Bsa29I ATCGAT 2 cut(s) 663, 1101
BsaBI GATNNNNATC 1 cut(s) 372
BsaI GGTCTC 2 cut(s) 60, 540
BsaJI CCNNGG 7 cut(s) 125, 126, 958, 1156, 1319, 1339, 1393
BsaXI ACNNNNNCTCC 2 cut(s) 1214, 1244
Bsc4I CCNNNNNNNGG 3 cut(s) 115, 911, 1325
Bse1I ACTGG 3 cut(s) 501, 1274, 1330
Bse3DI GCAATG 1 cut(s) 871
Bse8I GATNNNNATC 1 cut(s) 372
BseBI CCWGG 4 cut(s) 127, 551, 753, 1321
BseCI ATCGAT 2 cut(s) 663, 1101
BseDI CCNNGG 7 cut(s) 125, 126, 958, 1156, 1319, 1339, 1393
BseGI GGATG 1 cut(s) 474
BseJI GATNNNNATC 1 cut(s) 372
BseLI CCNNNNNNNGG 3 cut(s) 115, 911, 1325
BseMI GCAATG 1 cut(s) 871
BseMII CTCAG 3 cut(s) 1118, 1193, 1401
BseNI ACTGG 3 cut(s) 501, 1274, 1330
BseRI GAGGAG 8 cut(s) 57, 78, 128, 146, 599, 940, 1184, 1222
BseXI GCAGC 5 cut(s) 275, 322, 704, 707, 1326
Bsh1236I CGCG 1 cut(s) 464
BshFI GGCC 2 cut(s) 5, 557
BshNI GGYRCC 1 cut(s) 1210
BshVI ATCGAT 2 cut(s) 663, 1101
BsiHKAI GWGCWC 3 cut(s) 491, 629, 1348
BsiHKCI CYCGRG 2 cut(s) 628, 788
BslFI GGGAC 3 cut(s) 108, 258, 1026
BslI CCNNNNNNNGG 3 cut(s) 115, 911, 1325
BsmAI GTCTC 4 cut(s) 60, 130, 345, 540
BsmFI GGGAC 3 cut(s) 108, 258, 1026
BsnI GGCC 2 cut(s) 5, 557
Bso31I GGTCTC 2 cut(s) 60, 540
BsoBI CYCGRG 2 cut(s) 628, 788
Bsp119I TTCGAA 1 cut(s) 1147
Bsp1286I GDGCHC 3 cut(s) 491, 629, 1348
Bsp143I GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
Bsp1720I GCTNAGC 1 cut(s) 1179
Bsp19I CCATGG 1 cut(s) 958
BspACI CCGC 1 cut(s) 164
BspANI GGCC 2 cut(s) 5, 557
BspCNI CTCAG 3 cut(s) 1119, 1192, 1400
BspDI ATCGAT 2 cut(s) 663, 1101
BspFNI CGCG 1 cut(s) 464
BspHI TCATGA 1 cut(s) 1014
BspLI GGNNCC 4 cut(s) 207, 274, 893, 1212
BspMAI CTGCAG 2 cut(s) 85, 694
BspMI ACCTGC 1 cut(s) 88
BspPI GGATC 3 cut(s) 190, 886, 899
BspQI GCTCTTC 1 cut(s) 1190
BspT104I TTCGAA 1 cut(s) 1147
BspT107I GGYRCC 1 cut(s) 1210
BspTNI GGTCTC 2 cut(s) 60, 540
BsrDI GCAATG 1 cut(s) 871
BsrI ACTGG 3 cut(s) 501, 1274, 1330
BssECI CCNNGG 7 cut(s) 125, 126, 958, 1156, 1319, 1339, 1393
BssMI GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
BssSI CACGAG 1 cut(s) 1301
BssT1I CCWWGG 3 cut(s) 958, 1156, 1339
Bst2BI CACGAG 1 cut(s) 1301
Bst2UI CCWGG 4 cut(s) 127, 551, 753, 1321
Bst4CI ACNGT 3 cut(s) 300, 356, 1381
Bst6I CTCTTC 1 cut(s) 1190
BstBI TTCGAA 1 cut(s) 1147
BstDEI CTNAG 4 cut(s) 410, 1127, 1179, 1387
BstDSI CCRYGG 1 cut(s) 958
BstF5I GGATG 1 cut(s) 474
BstFNI CGCG 1 cut(s) 464
BstKTI GATC 7 cut(s) 198, 376, 540, 709, 894, 1105, 1258
BstMAI GTCTC 4 cut(s) 60, 130, 345, 540
BstMBI GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
BstMWI GCNNNNNNNGC 2 cut(s) 701, 1352
BstNI CCWGG 4 cut(s) 127, 551, 753, 1321
BstSCI CCNGG 4 cut(s) 125, 549, 751, 1319
BstSFI CTRYAG 2 cut(s) 81, 690
BstUI CGCG 1 cut(s) 464
BstV1I GCAGC 5 cut(s) 275, 322, 704, 707, 1326
BstX2I RGATCY 3 cut(s) 195, 373, 891
BstYI RGATCY 3 cut(s) 195, 373, 891
Bsu15I ATCGAT 2 cut(s) 663, 1101
BsuRI GGCC 2 cut(s) 5, 557
BsuTUI ATCGAT 2 cut(s) 663, 1101
BtgI CCRYGG 1 cut(s) 958
BtsCI GGATG 1 cut(s) 474
BtsIMutI CAGTG 2 cut(s) 494, 1200
BveI ACCTGC 1 cut(s) 88
CaiI CAGNNNCTG 1 cut(s) 1320
CciI TCATGA 1 cut(s) 1014
Cfr13I GGNCC 2 cut(s) 4, 272
ClaI ATCGAT 2 cut(s) 663, 1101
CsiI ACCWGGT 1 cut(s) 549
Csp6I GTAC 3 cut(s) 244, 301, 840
CviAII CATG 6 cut(s) 110, 214, 284, 569, 959, 1015
CviQI GTAC 3 cut(s) 244, 301, 840
DdeI CTNAG 4 cut(s) 410, 1127, 1179, 1387
DpnI GATC 7 cut(s) 197, 375, 539, 708, 893, 1104, 1257
DpnII GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
DraI TTTAAA 1 cut(s) 901
Eam1104I CTCTTC 1 cut(s) 1190
EarI CTCTTC 1 cut(s) 1190
Ecl136II GAGCTC 1 cut(s) 627
Eco130I CCWWGG 3 cut(s) 958, 1156, 1339
Eco24I GRGCYC 1 cut(s) 629
Eco31I GGTCTC 2 cut(s) 60, 540
Eco47I GGWCC 1 cut(s) 272
Eco53kI GAGCTC 1 cut(s) 627
Eco57I CTGAAG 1 cut(s) 863
Eco88I CYCGRG 2 cut(s) 628, 788
EcoICRI GAGCTC 1 cut(s) 627
EcoRI GAATTC 2 cut(s) 455, 500
EcoRII CCWGG 4 cut(s) 125, 549, 751, 1319
EcoT14I CCWWGG 3 cut(s) 958, 1156, 1339
EcoT38I GRGCYC 1 cut(s) 629
ErhI CCWWGG 3 cut(s) 958, 1156, 1339
FaeI CATG 6 cut(s) 113, 217, 287, 572, 962, 1018
FalI AAGNNNNNCTT 2 cut(s) 194, 226
FaqI GGGAC 3 cut(s) 108, 258, 1026
FatI CATG 6 cut(s) 109, 213, 283, 568, 958, 1014
FauNDI CATATG 1 cut(s) 1079
FblI GTMKAC 1 cut(s) 990
Fnu4HI GCNGC 5 cut(s) 264, 336, 693, 696, 1315
FokI GGATG 1 cut(s) 481
FriOI GRGCYC 1 cut(s) 629
Fsp4HI GCNGC 5 cut(s) 264, 336, 693, 696, 1315
FspBI CTAG 2 cut(s) 906, 1352
GluI GCNGC 5 cut(s) 264, 336, 693, 696, 1315
GsuI CTGGAG 2 cut(s) 596, 605
HaeIII GGCC 2 cut(s) 5, 557
Hin1II CATG 6 cut(s) 113, 217, 287, 572, 962, 1018
HincII GTYRAC 1 cut(s) 991
HindII GTYRAC 1 cut(s) 991
HindIII AAGCTT 1 cut(s) 323
HinfI GANTC 4 cut(s) 138, 963, 995, 1091
HphI GGTGA 2 cut(s) 106, 196
Hpy166II GTNNAC 3 cut(s) 50, 991, 1384
Hpy188I TCNGA 7 cut(s) 221, 350, 537, 711, 801, 1128, 1377
Hpy188III TCNNGA 6 cut(s) 382, 541, 725, 1015, 1043, 1301
Hpy8I GTNNAC 3 cut(s) 50, 991, 1384
Hpy99I CGWCG 1 cut(s) 995
HpyAV CCTTC 5 cut(s) 220, 286, 379, 830, 977
HpyCH4III ACNGT 3 cut(s) 300, 356, 1381
HpyCH4IV ACGT 1 cut(s) 847
HpyCH4V TGCA 7 cut(s) 83, 263, 311, 338, 371, 692, 871
HpyF10VI GCNNNNNNNGC 2 cut(s) 701, 1352
HpyF3I CTNAG 4 cut(s) 410, 1127, 1179, 1387
HpySE526I ACGT 1 cut(s) 847
Hsp92II CATG 6 cut(s) 113, 217, 287, 572, 962, 1018
Kzo9I GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
LguI GCTCTTC 1 cut(s) 1190
LmnI GCTCC 3 cut(s) 222, 494, 927
Lsp1109I GCAGC 5 cut(s) 275, 322, 704, 707, 1326
LweI GCATC 4 cut(s) 358, 893, 1132, 1377
MabI ACCWGGT 1 cut(s) 549
MaeI CTAG 2 cut(s) 906, 1352
MaeII ACGT 1 cut(s) 847
MaeIII GTNAC 4 cut(s) 31, 744, 1066, 1274
MalI GATC 7 cut(s) 197, 375, 539, 708, 893, 1104, 1257
MboI GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
MboII GAAGA 7 cut(s) 167, 664, 746, 788, 965, 1177, 1265
MfeI CAATTG 1 cut(s) 255
MflI RGATCY 3 cut(s) 195, 373, 891
MhlI GDGCHC 3 cut(s) 491, 629, 1348
MlyI GAGTC 2 cut(s) 132, 989
MmeI TCCRAC 1 cut(s) 244
MroXI GAANNNNTTC 1 cut(s) 531
MseI TTAA 4 cut(s) 149, 327, 900, 1239
MspA1I CMGCKG 1 cut(s) 616
MspR9I CCNGG 4 cut(s) 127, 551, 753, 1321
MunI CAATTG 1 cut(s) 255
MvaI CCWGG 4 cut(s) 127, 551, 753, 1321
MvnI CGCG 1 cut(s) 464
MwoI GCNNNNNNNGC 2 cut(s) 701, 1352
NcoI CCATGG 1 cut(s) 958
NdeI CATATG 1 cut(s) 1079
NdeII GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
NlaIII CATG 6 cut(s) 113, 217, 287, 572, 962, 1018
NlaIV GGNNCC 4 cut(s) 207, 274, 893, 1212
NmuCI GTSAC 2 cut(s) 744, 1066
NspV TTCGAA 1 cut(s) 1147
PaeR7I CTCGAG 2 cut(s) 628, 788
PagI TCATGA 1 cut(s) 1014
PasI CCCWGGG 1 cut(s) 126
PciSI GCTCTTC 1 cut(s) 1190
PcsI WCGNNNNNNNCGW 1 cut(s) 1107
PdmI GAANNNNTTC 1 cut(s) 531
PfeI GAWTC 2 cut(s) 963, 1091
PkrI GCNGC 5 cut(s) 265, 337, 694, 697, 1316
PleI GAGTC 2 cut(s) 132, 989
PpsI GAGTC 2 cut(s) 132, 989
Psp124BI GAGCTC 1 cut(s) 629
Psp1406I AACGTT 1 cut(s) 847
Psp6I CCWGG 4 cut(s) 125, 549, 751, 1319
PspGI CCWGG 4 cut(s) 125, 549, 751, 1319
PspN4I GGNNCC 4 cut(s) 207, 274, 893, 1212
PspPI GGNCC 2 cut(s) 4, 272
PspXI VCTCGAGB 2 cut(s) 628, 788
PsrI GAACNNNNNNTAC 2 cut(s) 832, 864
PstI CTGCAG 2 cut(s) 85, 694
PstNI CAGNNNCTG 1 cut(s) 1320
PsuI RGATCY 3 cut(s) 195, 373, 891
PvuII CAGCTG 1 cut(s) 616
RsaI GTAC 3 cut(s) 245, 302, 841
RsaNI GTAC 3 cut(s) 244, 301, 840
SacI GAGCTC 1 cut(s) 629
SalI GTCGAC 1 cut(s) 989
SapI GCTCTTC 1 cut(s) 1190
SaqAI TTAA 4 cut(s) 149, 327, 900, 1239
SatI GCNGC 5 cut(s) 264, 336, 693, 696, 1315
Sau3AI GATC 7 cut(s) 195, 373, 537, 706, 891, 1102, 1255
Sau96I GGNCC 2 cut(s) 4, 272
ScaI AGTACT 1 cut(s) 245
SchI GAGTC 2 cut(s) 132, 989
ScrFI CCNGG 4 cut(s) 127, 551, 753, 1321
SduI GDGCHC 3 cut(s) 491, 629, 1348
SexAI ACCWGGT 1 cut(s) 549
SfaNI GCATC 4 cut(s) 358, 893, 1132, 1377
SfcI CTRYAG 2 cut(s) 81, 690
Sfr274I CTCGAG 2 cut(s) 628, 788
SfuI TTCGAA 1 cut(s) 1147
SinI GGWCC 1 cut(s) 272
SlaI CTCGAG 2 cut(s) 628, 788
SmlI CTYRAG 3 cut(s) 380, 628, 788
SmoI CTYRAG 3 cut(s) 380, 628, 788
SsiI CCGC 1 cut(s) 164
SspMI CTAG 2 cut(s) 906, 1352
SstI GAGCTC 1 cut(s) 629
StyD4I CCNGG 4 cut(s) 125, 549, 751, 1319
StyI CCWWGG 3 cut(s) 958, 1156, 1339
TaaI ACNGT 3 cut(s) 300, 356, 1381
TaiI ACGT 1 cut(s) 850
TaqII GACCGA 1 cut(s) 260
TatI WGTACW 1 cut(s) 243
TfiI GAWTC 2 cut(s) 963, 1091
Tru1I TTAA 4 cut(s) 149, 327, 900, 1239
Tru9I TTAA 4 cut(s) 149, 327, 900, 1239
TscAI CASTG 2 cut(s) 501, 1207
TseFI GTSAC 2 cut(s) 744, 1066
TseI GCWGC 5 cut(s) 263, 335, 692, 695, 1314
Tsp45I GTSAC 2 cut(s) 744, 1066
TspDTI ATGAA 8 cut(s) 30, 202, 420, 493, 534, 959, 1003, 1031
TspGWI ACGGA 1 cut(s) 729
TspRI CASTG 2 cut(s) 501, 1207
VpaK11BI GGWCC 1 cut(s) 272
XapI RAATTY 4 cut(s) 233, 455, 500, 529
XcmI CCANNNNNNNNNTGG 1 cut(s) 956
XhoI CTCGAG 2 cut(s) 628, 788
XmiI GTMKAC 1 cut(s) 990
XmnI GAANNNNTTC 1 cut(s) 531
XspI CTAG 2 cut(s) 906, 1352
ZrmI AGTACT 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.