pycom14g07350

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
OG0001605
Physical Location & Seq
Reverse (-)
7397752 .. 7398966
1215 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g07350.1

Sequence Viewer

Length: 1215 bp
ATGCTCCGCAATCCCAAAACTTTCGAGAAGTTTTACGAGCCGAGAGCCGTAGCAATAGGCCCTTTCCATCATGGCAATTCAAGGTGCGAGCTGGCAGAGGACTTCAAGCTTATGTTGACAAAAAGATTTCTTGTTTACACTGAGCAAAACGATGAAGATGTGCATTATATGATTGAGAAGAGGATCGAAGATCTAAGGGGCTGTTACACTGAGGAAGCGACACAGCACTATGATGATGAGGCCCTCGCTTGGATGTTGTTCTTAGATGGGTGTTCAACCTTACAATTCATACACTCCTTTGTGGAGGAAAAGTTGGAAGAATTGTCGATCAAAAGGGACCAGATAGCCTTTGCACAACAGGACTTGTTCTTGCTAGAGAACCAAGTCCCTTATCAAGTCCTCGAGCTGTTGATGAGCTCAAGCAACAAACACGGGGAGTTGAAGAACGCAATCGAGACTTACGTTCAGGTGAACATTAGTGCACCTGGAAAGAAGCAACCAAACGTAGCAATACCCATGGAAGAAGAGCCCGCTCATCTTCTTGACCTTCTCCGAACAAGAATGCTAGGTGCACAAAAAAATCCCGATAAGCGACCTAAAGACCACTCTGTACAATCTTTTCGCAATGTACAAGAGCTTGATGCAGTCGGGATCCATTTTACGCTTAGTAACAGTAACTATTTGGGGGACATATCTTTTGTTTCTCATTCCTTTGCAGGATTCCTTAGTCTTCCTGCAATATCAGTAGATGACTCAACAGGGCCTAAGTTCATGAATCTGATAGCATATGAAATGTGTCATGATTTCCAGAATGATTTTGCGGTCACCTCTTACATCAGCTTCCTTGATGCACTCATTGATCATGCAGATGATGTTAAGAAGCTAAGGTCAGCCGGTGTACTTTACAACTTACTGGGGAGTGATAAGGAGGCGGCTCAGCTCTTTAATGAGATTGGCACTGACTTGGTCCCTAACACTGACATATACCTCGATGTCAAAGCCAAAATAGAAAAACACTACAAAACCAAGTGGAAGACCTGGATGTCTCAATTCTATCACGATCATTTCAGTAGCCCCTGGACTTTCCTGGCTTTAGTGGGTGCTCTAGCAGCACTTGGGTTAACCAGCATCCAGACTTGGTTTGCAGTCTATTCTCCACCGTCCCCCTGTGATGTCGTATGCCAGAACTTGAAAATGCGGTGGAAACTTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

405

Amino Acids

46.31

Weight (kDa)

5.46

Isoelectric Point (pI)

48.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF247 PF03140 7 - 372 5.4e-92 Plant protein of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1042
AccBSI CCGCTC 1 cut(s) 533
AciI CCGC 5 cut(s) 7, 531, 821, 932, 1198
AclWI GGATC 3 cut(s) 191, 646, 659
AfaI GTAC 3 cut(s) 612, 630, 900
AfiI CCNNNNNNNGG 1 cut(s) 249
AflII CTTAAG 1 cut(s) 1208
AgsI TTSAA 5 cut(s) 81, 106, 276, 442, 1192
AjnI CCWGG 4 cut(s) 484, 1037, 1076, 1086
AluBI AGCT 8 cut(s) 91, 109, 406, 417, 637, 840, 883, 940
AluI AGCT 8 cut(s) 91, 109, 406, 417, 637, 840, 883, 940
Alw21I GWGCWC 4 cut(s) 419, 484, 574, 1105
Alw26I GTCTC 2 cut(s) 449, 1050
Alw44I GTGCAC 2 cut(s) 480, 570
AlwI GGATC 3 cut(s) 191, 646, 659
Ama87I CYCGRG 1 cut(s) 401
AoxI GGCC 3 cut(s) 58, 240, 761
ApaLI GTGCAC 2 cut(s) 480, 570
ApeKI GCWGC 1 cut(s) 1109
ArsI GACNNNNNNTTYG 2 cut(s) 680, 712
AspS9I GGNCC 5 cut(s) 59, 241, 337, 761, 967
AsuHPI GGTGA 2 cut(s) 481, 817
AvaI CYCGRG 1 cut(s) 401
AvaII GGWCC 2 cut(s) 337, 967
BaeGI GKGCMC 2 cut(s) 484, 574
BamHI GGATCC 1 cut(s) 651
BanII GRGCYC 2 cut(s) 419, 531
BbsI GAAGAC 2 cut(s) 722, 1040
Bbv12I GWGCWC 4 cut(s) 419, 484, 574, 1105
BbvI GCAGC 1 cut(s) 1121
BccI CCATC 2 cut(s) 75, 260
BceAI ACGGC 1 cut(s) 32
BciT130I CCWGG 4 cut(s) 486, 1039, 1078, 1088
BclI TGATCA 1 cut(s) 859
BcoDI GTCTC 2 cut(s) 449, 1050
BfaI CTAG 3 cut(s) 374, 566, 1106
BfrI CTTAAG 1 cut(s) 1208
BglII AGATCT 1 cut(s) 190
BisI GCNGC 2 cut(s) 933, 1110
BlpI GCTNAGC 1 cut(s) 936
BlsI GCNGC 2 cut(s) 934, 1111
Bme1390I CCNGG 4 cut(s) 486, 1039, 1078, 1088
Bme18I GGWCC 2 cut(s) 337, 967
BmeT110I CYCGRG 1 cut(s) 401
BmgT120I GGNCC 5 cut(s) 59, 241, 337, 761, 967
BmiI GGNNCC 3 cut(s) 338, 653, 969
BmrFI CCNGG 4 cut(s) 486, 1039, 1078, 1088
BmrI ACTGGG 1 cut(s) 923
BmsI GCATC 3 cut(s) 631, 838, 1137
BmuI ACTGGG 1 cut(s) 923
BpiI GAAGAC 2 cut(s) 722, 1040
Bpu10I CCTNAGC 1 cut(s) 884
Bpu1102I GCTNAGC 1 cut(s) 936
BpuEI CTTGAG 1 cut(s) 403
BsaJI CCNNGG 2 cut(s) 516, 1076
BsaXI ACNNNNNCTCC 2 cut(s) 296, 326
Bsc4I CCNNNNNNNGG 1 cut(s) 249
Bse118I RCCGGY 1 cut(s) 893
Bse1I ACTGG 1 cut(s) 918
Bse3DI GCAATG 1 cut(s) 631
BseBI CCWGG 4 cut(s) 486, 1039, 1078, 1088
BseDI CCNNGG 2 cut(s) 516, 1076
BseGI GGATG 3 cut(s) 258, 1047, 1128
BseLI CCNNNNNNNGG 1 cut(s) 249
BseMI GCAATG 1 cut(s) 631
BseMII CTCAG 3 cut(s) 132, 201, 950
BseNI ACTGG 1 cut(s) 918
BseSI GKGCMC 2 cut(s) 484, 574
BseXI GCAGC 1 cut(s) 1121
BshFI GGCC 3 cut(s) 60, 242, 763
BsiHKAI GWGCWC 4 cut(s) 419, 484, 574, 1105
BsiHKCI CYCGRG 1 cut(s) 401
BsiSI CCGG 1 cut(s) 894
BslFI GGGAC 5 cut(s) 350, 371, 701, 953, 1147
BslI CCNNNNNNNGG 1 cut(s) 249
BsmAI GTCTC 2 cut(s) 449, 1050
BsmFI GGGAC 5 cut(s) 350, 371, 701, 953, 1147
BsmI GAATGC 1 cut(s) 567
BsnI GGCC 3 cut(s) 60, 242, 763
BsoBI CYCGRG 1 cut(s) 401
Bsp1286I GDGCHC 5 cut(s) 419, 484, 531, 574, 1105
Bsp1407I TGTACA 2 cut(s) 610, 628
Bsp143I GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
Bsp1720I GCTNAGC 1 cut(s) 936
Bsp19I CCATGG 1 cut(s) 516
BspACI CCGC 5 cut(s) 7, 531, 821, 932, 1198
BspANI GGCC 3 cut(s) 60, 242, 763
BspCNI CTCAG 3 cut(s) 133, 202, 949
BspHI TCATGA 2 cut(s) 771, 799
BspLI GGNNCC 3 cut(s) 338, 653, 969
BspPI GGATC 3 cut(s) 191, 646, 659
BspQI GCTCTTC 1 cut(s) 519
BspTI CTTAAG 1 cut(s) 1208
BsrBI CCGCTC 1 cut(s) 533
BsrDI GCAATG 1 cut(s) 631
BsrFI RCCGGY 1 cut(s) 893
BsrGI TGTACA 2 cut(s) 610, 628
BsrI ACTGG 1 cut(s) 918
BssAI RCCGGY 1 cut(s) 893
BssECI CCNNGG 2 cut(s) 516, 1076
BssMI GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
BssT1I CCWWGG 1 cut(s) 516
Bst2UI CCWGG 4 cut(s) 486, 1039, 1078, 1088
Bst4CI ACNGT 2 cut(s) 674, 1161
Bst6I CTCTTC 2 cut(s) 173, 519
BstAFI CTTAAG 1 cut(s) 1208
BstAUI TGTACA 2 cut(s) 610, 628
BstC8I GCNNGC 3 cut(s) 89, 93, 531
BstDEI CTNAG 9 cut(s) 141, 194, 210, 262, 665, 725, 765, 884, 936
BstDSI CCRYGG 1 cut(s) 516
BstEII GGTNACC 1 cut(s) 823
BstF5I GGATG 3 cut(s) 258, 1047, 1128
BstKTI GATC 6 cut(s) 186, 193, 330, 654, 862, 1063
BstMAI GTCTC 2 cut(s) 449, 1050
BstMBI GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
BstMWI GCNNNNNNNGC 1 cut(s) 1109
BstNI CCWGG 4 cut(s) 486, 1039, 1078, 1088
BstPI GGTNACC 1 cut(s) 823
BstSCI CCNGG 4 cut(s) 484, 1037, 1076, 1086
BstSLI GKGCMC 2 cut(s) 484, 574
BstV1I GCAGC 1 cut(s) 1121
BstV2I GAAGAC 2 cut(s) 722, 1040
BstX2I RGATCY 2 cut(s) 190, 651
BstYI RGATCY 2 cut(s) 190, 651
BsuRI GGCC 3 cut(s) 60, 242, 763
BtgI CCRYGG 1 cut(s) 516
BtsCI GGATG 3 cut(s) 258, 1047, 1128
BtsIMutI CAGTG 4 cut(s) 138, 207, 957, 975
Cac8I GCNNGC 3 cut(s) 89, 93, 531
CciI TCATGA 2 cut(s) 771, 799
Cfr10I RCCGGY 1 cut(s) 893
Cfr13I GGNCC 5 cut(s) 59, 241, 337, 761, 967
Csp6I GTAC 3 cut(s) 611, 629, 899
CviAII CATG 5 cut(s) 71, 517, 772, 800, 863
CviQI GTAC 3 cut(s) 611, 629, 899
DdeI CTNAG 9 cut(s) 141, 194, 210, 262, 665, 725, 765, 884, 936
DpnI GATC 6 cut(s) 185, 192, 329, 653, 861, 1062
DpnII GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
DrdI GACNNNNNNGTC 1 cut(s) 1042
DseDI GACNNNNNNGTC 1 cut(s) 1042
Eam1104I CTCTTC 2 cut(s) 173, 519
EarI CTCTTC 2 cut(s) 173, 519
Ecl136II GAGCTC 1 cut(s) 417
Eco130I CCWWGG 1 cut(s) 516
Eco24I GRGCYC 2 cut(s) 419, 531
Eco47I GGWCC 2 cut(s) 337, 967
Eco53kI GAGCTC 1 cut(s) 417
Eco88I CYCGRG 1 cut(s) 401
Eco91I GGTNACC 1 cut(s) 823
EcoICRI GAGCTC 1 cut(s) 417
EcoO109I RGGNCCY 3 cut(s) 59, 241, 761
EcoO65I GGTNACC 1 cut(s) 823
EcoRII CCWGG 4 cut(s) 484, 1037, 1076, 1086
EcoT14I CCWWGG 1 cut(s) 516
EcoT38I GRGCYC 2 cut(s) 419, 531
ErhI CCWWGG 1 cut(s) 516
FaeI CATG 5 cut(s) 74, 520, 775, 803, 866
FaqI GGGAC 5 cut(s) 350, 371, 701, 953, 1147
FatI CATG 5 cut(s) 70, 516, 771, 799, 862
FauI CCCGC 1 cut(s) 538
FauNDI CATATG 1 cut(s) 787
FbaI TGATCA 1 cut(s) 859
Fnu4HI GCNGC 2 cut(s) 933, 1110
FokI GGATG 3 cut(s) 265, 1054, 1115
FriOI GRGCYC 2 cut(s) 419, 531
Fsp4HI GCNGC 2 cut(s) 933, 1110
FspBI CTAG 3 cut(s) 374, 566, 1106
GluI GCNGC 2 cut(s) 933, 1110
HaeIII GGCC 3 cut(s) 60, 242, 763
HapII CCGG 1 cut(s) 894
Hin1II CATG 5 cut(s) 74, 520, 775, 803, 866
HincII GTYRAC 2 cut(s) 117, 1122
HindII GTYRAC 2 cut(s) 117, 1122
HindIII AAGCTT 1 cut(s) 107
HinfI GANTC 3 cut(s) 720, 752, 775
HpaI GTTAAC 1 cut(s) 1122
HpaII CCGG 1 cut(s) 894
HphI GGTGA 2 cut(s) 481, 817
Hpy166II GTNNAC 7 cut(s) 117, 136, 472, 482, 572, 899, 1122
Hpy188I TCNGA 2 cut(s) 554, 780
Hpy8I GTNNAC 7 cut(s) 117, 136, 472, 482, 572, 899, 1122
HpyAV CCTTC 1 cut(s) 557
HpyCH4III ACNGT 2 cut(s) 674, 1161
HpyCH4IV ACGT 2 cut(s) 462, 504
HpyF10VI GCNNNNNNNGC 1 cut(s) 1109
HpyF3I CTNAG 9 cut(s) 141, 194, 210, 262, 665, 725, 765, 884, 936
HpySE526I ACGT 2 cut(s) 462, 504
Hsp92II CATG 5 cut(s) 74, 520, 775, 803, 866
Ksp22I TGATCA 1 cut(s) 859
KspAI GTTAAC 1 cut(s) 1122
Kzo9I GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
LguI GCTCTTC 1 cut(s) 519
LmnI GCTCC 1 cut(s) 9
Lsp1109I GCAGC 1 cut(s) 1121
LweI GCATC 3 cut(s) 631, 838, 1137
MaeI CTAG 3 cut(s) 374, 566, 1106
MaeII ACGT 2 cut(s) 462, 504
MaeIII GTNAC 4 cut(s) 203, 668, 674, 823
MalI GATC 6 cut(s) 185, 192, 329, 653, 861, 1062
MbiI CCGCTC 1 cut(s) 533
MboI GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
MflI RGATCY 2 cut(s) 190, 651
MhlI GDGCHC 5 cut(s) 419, 484, 531, 574, 1105
MluCI AATT 4 cut(s) 76, 284, 320, 1049
MlyI GAGTC 1 cut(s) 746
MmeI TCCRAC 1 cut(s) 294
MseI TTAA 4 cut(s) 876, 945, 1121, 1209
MslI CAYNNNNRTG 2 cut(s) 231, 867
MspCI CTTAAG 1 cut(s) 1208
MspI CCGG 1 cut(s) 894
MspR9I CCNGG 4 cut(s) 486, 1039, 1078, 1088
Mva1269I GAATGC 1 cut(s) 567
MvaI CCWGG 4 cut(s) 486, 1039, 1078, 1088
MwoI GCNNNNNNNGC 1 cut(s) 1109
NcoI CCATGG 1 cut(s) 516
NdeI CATATG 1 cut(s) 787
NdeII GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
NlaIII CATG 5 cut(s) 74, 520, 775, 803, 866
NlaIV GGNNCC 3 cut(s) 338, 653, 969
NmeAIII GCCGAG 1 cut(s) 66
NmuCI GTSAC 1 cut(s) 823
PaeR7I CTCGAG 1 cut(s) 401
PagI TCATGA 2 cut(s) 771, 799
PciSI GCTCTTC 1 cut(s) 519
PcsI WCGNNNNNNNCGW 1 cut(s) 459
PctI GAATGC 1 cut(s) 567
PfeI GAWTC 2 cut(s) 720, 775
PflFI GACNNNGTC 1 cut(s) 965
PkrI GCNGC 2 cut(s) 934, 1111
PleI GAGTC 1 cut(s) 746
PpsI GAGTC 1 cut(s) 746
Psp124BI GAGCTC 1 cut(s) 419
Psp6I CCWGG 4 cut(s) 484, 1037, 1076, 1086
PspEI GGTNACC 1 cut(s) 823
PspGI CCWGG 4 cut(s) 484, 1037, 1076, 1086
PspN4I GGNNCC 3 cut(s) 338, 653, 969
PspPI GGNCC 5 cut(s) 59, 241, 337, 761, 967
PspXI VCTCGAGB 1 cut(s) 401
PsuI RGATCY 2 cut(s) 190, 651
PsyI GACNNNGTC 1 cut(s) 965
RsaI GTAC 3 cut(s) 612, 630, 900
RsaNI GTAC 3 cut(s) 611, 629, 899
RseI CAYNNNNRTG 2 cut(s) 231, 867
SacI GAGCTC 1 cut(s) 419
SapI GCTCTTC 1 cut(s) 519
SaqAI TTAA 4 cut(s) 876, 945, 1121, 1209
SatI GCNGC 2 cut(s) 933, 1110
Sau3AI GATC 6 cut(s) 183, 190, 327, 651, 859, 1060
Sau96I GGNCC 5 cut(s) 59, 241, 337, 761, 967
SchI GAGTC 1 cut(s) 746
ScrFI CCNGG 4 cut(s) 486, 1039, 1078, 1088
SduI GDGCHC 5 cut(s) 419, 484, 531, 574, 1105
SfaNI GCATC 3 cut(s) 631, 838, 1137
Sfr274I CTCGAG 1 cut(s) 401
SinI GGWCC 2 cut(s) 337, 967
SlaI CTCGAG 1 cut(s) 401
SmiMI CAYNNNNRTG 2 cut(s) 231, 867
SmlI CTYRAG 3 cut(s) 401, 418, 1208
SmoI CTYRAG 3 cut(s) 401, 418, 1208
Sse9I AATT 4 cut(s) 76, 284, 320, 1049
SsiI CCGC 5 cut(s) 7, 531, 821, 932, 1198
SspMI CTAG 3 cut(s) 374, 566, 1106
SstI GAGCTC 1 cut(s) 419
StyD4I CCNGG 4 cut(s) 484, 1037, 1076, 1086
StyI CCWWGG 1 cut(s) 516
TaaI ACNGT 2 cut(s) 674, 1161
TaiI ACGT 2 cut(s) 465, 507
TaqI TCGA 6 cut(s) 24, 186, 326, 402, 453, 990
TasI AATT 4 cut(s) 76, 284, 320, 1049
TatI WGTACW 3 cut(s) 610, 628, 898
TauI GCSGC 1 cut(s) 935
TfiI GAWTC 2 cut(s) 720, 775
Tru1I TTAA 4 cut(s) 876, 945, 1121, 1209
Tru9I TTAA 4 cut(s) 876, 945, 1121, 1209
TscAI CASTG 4 cut(s) 145, 214, 964, 982
TseFI GTSAC 1 cut(s) 823
TseI GCWGC 1 cut(s) 1109
Tsp45I GTSAC 1 cut(s) 823
TspDTI ATGAA 5 cut(s) 168, 277, 760, 788, 804
TspRI CASTG 4 cut(s) 145, 214, 964, 982
Tth111I GACNNNGTC 1 cut(s) 965
Vha464I CTTAAG 1 cut(s) 1208
VneI GTGCAC 2 cut(s) 480, 570
VpaK11BI GGWCC 2 cut(s) 337, 967
XhoI CTCGAG 1 cut(s) 401
XspI CTAG 3 cut(s) 374, 566, 1106
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.