UPF0481 protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 88 |
| AccB1I | GGYRCC | 1 cut(s) | 1156 |
| AccI | GTMKAC | 1 cut(s) | 936 |
| AciI | CCGC | 1 cut(s) | 164 |
| AclWI | GGATC | 3 cut(s) | 190, 835, 848 |
| AcsI | RAATTY | 4 cut(s) | 233, 455, 500, 529 |
| AcuI | CTGAAG | 1 cut(s) | 812 |
| AdeI | CACNNNGTG | 1 cut(s) | 773 |
| AfaI | GTAC | 3 cut(s) | 124, 302, 790 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 115 |
| AgsI | TTSAA | 4 cut(s) | 392, 652, 1094, 1135 |
| AjnI | CCWGG | 2 cut(s) | 125, 549 |
| AluBI | AGCT | 9 cut(s) | 325, 335, 616, 627, 739, 826, 1084, 1129, 1301 |
| AluI | AGCT | 9 cut(s) | 325, 335, 616, 627, 739, 826, 1084, 1129, 1301 |
| Alw21I | GWGCWC | 3 cut(s) | 491, 629, 1294 |
| Alw26I | GTCTC | 3 cut(s) | 60, 130, 540 |
| AlwI | GGATC | 3 cut(s) | 190, 835, 848 |
| Ama87I | CYCGRG | 1 cut(s) | 628 |
| AoxI | GGCC | 2 cut(s) | 3, 851 |
| ApeKI | GCWGC | 3 cut(s) | 263, 335, 833 |
| ApoI | RAATTY | 4 cut(s) | 233, 455, 500, 529 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 218, 250 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 531 |
| AspS9I | GGNCC | 2 cut(s) | 4, 272 |
| AsuC2I | CCSGG | 1 cut(s) | 838 |
| AsuHPI | GGTGA | 5 cut(s) | 106, 196, 565, 759, 1006 |
| AvaI | CYCGRG | 1 cut(s) | 628 |
| AvaII | GGWCC | 1 cut(s) | 272 |
| BamHI | GGATCC | 1 cut(s) | 840 |
| BanI | GGYRCC | 1 cut(s) | 1156 |
| BanII | GRGCYC | 1 cut(s) | 629 |
| BbsI | GAAGAC | 2 cut(s) | 399, 456 |
| Bbv12I | GWGCWC | 3 cut(s) | 491, 629, 1294 |
| BbvI | GCAGC | 3 cut(s) | 275, 322, 845 |
| BccI | CCATC | 2 cut(s) | 476, 1225 |
| BciT130I | CCWGG | 2 cut(s) | 127, 551 |
| BcnI | CCSGG | 1 cut(s) | 838 |
| BcoDI | GTCTC | 3 cut(s) | 60, 130, 540 |
| BfaI | CTAG | 4 cut(s) | 758, 771, 855, 1298 |
| BfmI | CTRYAG | 1 cut(s) | 81 |
| BfuAI | ACCTGC | 1 cut(s) | 88 |
| BglII | AGATCT | 1 cut(s) | 373 |
| BisI | GCNGC | 3 cut(s) | 264, 336, 834 |
| BlpI | GCTNAGC | 1 cut(s) | 1125 |
| BlsI | GCNGC | 3 cut(s) | 265, 337, 835 |
| Bme1390I | CCNGG | 3 cut(s) | 127, 551, 838 |
| Bme18I | GGWCC | 1 cut(s) | 272 |
| BmeT110I | CYCGRG | 1 cut(s) | 628 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 272 |
| BmiI | GGNNCC | 3 cut(s) | 207, 842, 1158 |
| BmrFI | CCNGG | 3 cut(s) | 127, 551, 838 |
| BmrI | ACTGGG | 1 cut(s) | 1225 |
| BmsI | GCATC | 3 cut(s) | 358, 1078, 1323 |
| BmuI | ACTGGG | 1 cut(s) | 1225 |
| BpiI | GAAGAC | 2 cut(s) | 399, 456 |
| BpmI | CTGGAG | 2 cut(s) | 596, 605 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1125 |
| BpuEI | CTTGAG | 2 cut(s) | 365, 755 |
| BpuMI | CCSGG | 1 cut(s) | 838 |
| Bsa29I | ATCGAT | 2 cut(s) | 663, 1047 |
| BsaBI | GATNNNNATC | 1 cut(s) | 372 |
| BsaI | GGTCTC | 2 cut(s) | 60, 540 |
| BsaJI | CCNNGG | 6 cut(s) | 126, 904, 1102, 1265, 1285, 1339 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 115 |
| Bse1I | ACTGG | 2 cut(s) | 501, 1220 |
| Bse8I | GATNNNNATC | 1 cut(s) | 372 |
| BseBI | CCWGG | 2 cut(s) | 127, 551 |
| BseCI | ATCGAT | 2 cut(s) | 663, 1047 |
| BseDI | CCNNGG | 6 cut(s) | 126, 904, 1102, 1265, 1285, 1339 |
| BseGI | GGATG | 2 cut(s) | 474, 1051 |
| BseJI | GATNNNNATC | 1 cut(s) | 372 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BseMII | CTCAG | 4 cut(s) | 707, 1064, 1139, 1347 |
| BseNI | ACTGG | 2 cut(s) | 501, 1220 |
| BseRI | GAGGAG | 7 cut(s) | 57, 78, 128, 146, 599, 889, 1130 |
| BseXI | GCAGC | 3 cut(s) | 275, 322, 845 |
| BshFI | GGCC | 2 cut(s) | 5, 853 |
| BshNI | GGYRCC | 1 cut(s) | 1156 |
| BshVI | ATCGAT | 2 cut(s) | 663, 1047 |
| BsiHKAI | GWGCWC | 3 cut(s) | 491, 629, 1294 |
| BsiHKCI | CYCGRG | 1 cut(s) | 628 |
| BsiSI | CCGG | 1 cut(s) | 837 |
| BslFI | GGGAC | 1 cut(s) | 972 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 115 |
| BsmAI | GTCTC | 3 cut(s) | 60, 130, 540 |
| BsmFI | GGGAC | 1 cut(s) | 972 |
| BsnI | GGCC | 2 cut(s) | 5, 853 |
| Bso31I | GGTCTC | 2 cut(s) | 60, 540 |
| BsoBI | CYCGRG | 1 cut(s) | 628 |
| Bsp1286I | GDGCHC | 3 cut(s) | 491, 629, 1294 |
| Bsp143I | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1125 |
| Bsp19I | CCATGG | 2 cut(s) | 904, 1265 |
| BspACI | CCGC | 1 cut(s) | 164 |
| BspANI | GGCC | 2 cut(s) | 5, 853 |
| BspCNI | CTCAG | 4 cut(s) | 706, 1065, 1138, 1346 |
| BspDI | ATCGAT | 2 cut(s) | 663, 1047 |
| BspHI | TCATGA | 2 cut(s) | 960, 1246 |
| BspLI | GGNNCC | 3 cut(s) | 207, 842, 1158 |
| BspMAI | CTGCAG | 1 cut(s) | 85 |
| BspMI | ACCTGC | 1 cut(s) | 88 |
| BspPI | GGATC | 3 cut(s) | 190, 835, 848 |
| BspQI | GCTCTTC | 1 cut(s) | 1136 |
| BspT107I | GGYRCC | 1 cut(s) | 1156 |
| BspTNI | GGTCTC | 2 cut(s) | 60, 540 |
| BsrI | ACTGG | 2 cut(s) | 501, 1220 |
| BssECI | CCNNGG | 6 cut(s) | 126, 904, 1102, 1265, 1285, 1339 |
| BssMI | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| BssT1I | CCWWGG | 4 cut(s) | 904, 1102, 1265, 1285 |
| Bst2UI | CCWGG | 2 cut(s) | 127, 551 |
| Bst4CI | ACNGT | 4 cut(s) | 356, 1211, 1273, 1327 |
| Bst6I | CTCTTC | 1 cut(s) | 1136 |
| BstC8I | GCNNGC | 1 cut(s) | 309 |
| BstDEI | CTNAG | 5 cut(s) | 410, 693, 1073, 1125, 1333 |
| BstDSI | CCRYGG | 2 cut(s) | 904, 1265 |
| BstEII | GGTNACC | 2 cut(s) | 553, 1012 |
| BstF5I | GGATG | 2 cut(s) | 474, 1051 |
| BstKTI | GATC | 5 cut(s) | 198, 376, 540, 843, 1051 |
| BstMAI | GTCTC | 3 cut(s) | 60, 130, 540 |
| BstMBI | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1298 |
| BstNI | CCWGG | 2 cut(s) | 127, 551 |
| BstNSI | RCATGY | 1 cut(s) | 311 |
| BstPI | GGTNACC | 2 cut(s) | 553, 1012 |
| BstSCI | CCNGG | 3 cut(s) | 125, 549, 836 |
| BstSFI | CTRYAG | 1 cut(s) | 81 |
| BstV1I | GCAGC | 3 cut(s) | 275, 322, 845 |
| BstV2I | GAAGAC | 2 cut(s) | 399, 456 |
| BstX2I | RGATCY | 3 cut(s) | 195, 373, 840 |
| BstYI | RGATCY | 3 cut(s) | 195, 373, 840 |
| Bsu15I | ATCGAT | 2 cut(s) | 663, 1047 |
| BsuRI | GGCC | 2 cut(s) | 5, 853 |
| BsuTUI | ATCGAT | 2 cut(s) | 663, 1047 |
| BtgI | CCRYGG | 2 cut(s) | 904, 1265 |
| BtsCI | GGATG | 2 cut(s) | 474, 1051 |
| BtsIMutI | CAGTG | 2 cut(s) | 494, 1146 |
| BveI | ACCTGC | 1 cut(s) | 88 |
| Cac8I | GCNNGC | 1 cut(s) | 309 |
| CciI | TCATGA | 2 cut(s) | 960, 1246 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 272 |
| ClaI | ATCGAT | 2 cut(s) | 663, 1047 |
| CsiI | ACCWGGT | 1 cut(s) | 549 |
| Csp6I | GTAC | 3 cut(s) | 123, 301, 789 |
| CviAII | CATG | 9 cut(s) | 110, 214, 308, 465, 569, 905, 961, 1247, 1266 |
| CviQI | GTAC | 3 cut(s) | 123, 301, 789 |
| DdeI | CTNAG | 5 cut(s) | 410, 693, 1073, 1125, 1333 |
| DpnI | GATC | 5 cut(s) | 197, 375, 539, 842, 1050 |
| DpnII | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| DraIII | CACNNNGTG | 1 cut(s) | 773 |
| Eam1104I | CTCTTC | 1 cut(s) | 1136 |
| EarI | CTCTTC | 1 cut(s) | 1136 |
| Ecl136II | GAGCTC | 1 cut(s) | 627 |
| Eco130I | CCWWGG | 4 cut(s) | 904, 1102, 1265, 1285 |
| Eco147I | AGGCCT | 1 cut(s) | 853 |
| Eco24I | GRGCYC | 1 cut(s) | 629 |
| Eco31I | GGTCTC | 2 cut(s) | 60, 540 |
| Eco47I | GGWCC | 1 cut(s) | 272 |
| Eco53kI | GAGCTC | 1 cut(s) | 627 |
| Eco57I | CTGAAG | 1 cut(s) | 812 |
| Eco88I | CYCGRG | 1 cut(s) | 628 |
| Eco91I | GGTNACC | 2 cut(s) | 553, 1012 |
| EcoICRI | GAGCTC | 1 cut(s) | 627 |
| EcoO65I | GGTNACC | 2 cut(s) | 553, 1012 |
| EcoRI | GAATTC | 2 cut(s) | 455, 500 |
| EcoRII | CCWGG | 2 cut(s) | 125, 549 |
| EcoT14I | CCWWGG | 4 cut(s) | 904, 1102, 1265, 1285 |
| EcoT38I | GRGCYC | 1 cut(s) | 629 |
| ErhI | CCWWGG | 4 cut(s) | 904, 1102, 1265, 1285 |
| FaeI | CATG | 9 cut(s) | 113, 217, 311, 468, 572, 908, 964, 1250, 1269 |
| FaqI | GGGAC | 1 cut(s) | 972 |
| FatI | CATG | 9 cut(s) | 109, 213, 307, 464, 568, 904, 960, 1246, 1265 |
| FauNDI | CATATG | 1 cut(s) | 1025 |
| FblI | GTMKAC | 1 cut(s) | 936 |
| Fnu4HI | GCNGC | 3 cut(s) | 264, 336, 834 |
| FokI | GGATG | 2 cut(s) | 481, 1038 |
| FriOI | GRGCYC | 1 cut(s) | 629 |
| Fsp4HI | GCNGC | 3 cut(s) | 264, 336, 834 |
| FspBI | CTAG | 4 cut(s) | 758, 771, 855, 1298 |
| GluI | GCNGC | 3 cut(s) | 264, 336, 834 |
| GsuI | CTGGAG | 2 cut(s) | 596, 605 |
| HaeIII | GGCC | 2 cut(s) | 5, 853 |
| HapII | CCGG | 1 cut(s) | 837 |
| Hin1II | CATG | 9 cut(s) | 113, 217, 311, 468, 572, 908, 964, 1250, 1269 |
| HincII | GTYRAC | 1 cut(s) | 34 |
| HindII | GTYRAC | 1 cut(s) | 34 |
| HindIII | AAGCTT | 1 cut(s) | 323 |
| HinfI | GANTC | 4 cut(s) | 138, 909, 941, 1037 |
| HpaI | GTTAAC | 1 cut(s) | 34 |
| HpaII | CCGG | 1 cut(s) | 837 |
| HphI | GGTGA | 5 cut(s) | 106, 196, 565, 759, 1006 |
| Hpy166II | GTNNAC | 4 cut(s) | 34, 50, 937, 1330 |
| Hpy188I | TCNGA | 6 cut(s) | 221, 537, 696, 747, 1074, 1323 |
| Hpy188III | TCNNGA | 7 cut(s) | 382, 541, 710, 961, 989, 1055, 1247 |
| Hpy8I | GTNNAC | 4 cut(s) | 34, 50, 937, 1330 |
| HpyAV | CCTTC | 2 cut(s) | 220, 379 |
| HpyCH4III | ACNGT | 4 cut(s) | 356, 1211, 1273, 1327 |
| HpyCH4IV | ACGT | 1 cut(s) | 816 |
| HpyCH4V | TGCA | 6 cut(s) | 83, 263, 311, 338, 371, 820 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1298 |
| HpyF3I | CTNAG | 5 cut(s) | 410, 693, 1073, 1125, 1333 |
| HpySE526I | ACGT | 1 cut(s) | 816 |
| Hsp92II | CATG | 9 cut(s) | 113, 217, 311, 468, 572, 908, 964, 1250, 1269 |
| KspAI | GTTAAC | 1 cut(s) | 34 |
| Kzo9I | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| LguI | GCTCTTC | 1 cut(s) | 1136 |
| LmnI | GCTCC | 3 cut(s) | 222, 494, 876 |
| Lsp1109I | GCAGC | 3 cut(s) | 275, 322, 845 |
| LweI | GCATC | 3 cut(s) | 358, 1078, 1323 |
| MabI | ACCWGGT | 1 cut(s) | 549 |
| MaeI | CTAG | 4 cut(s) | 758, 771, 855, 1298 |
| MaeII | ACGT | 1 cut(s) | 816 |
| MaeIII | GTNAC | 4 cut(s) | 553, 1012, 1211, 1220 |
| MalI | GATC | 5 cut(s) | 197, 375, 539, 842, 1050 |
| MboI | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| MboII | GAAGA | 8 cut(s) | 167, 404, 461, 664, 734, 885, 911, 1123 |
| MfeI | CAATTG | 1 cut(s) | 255 |
| MflI | RGATCY | 3 cut(s) | 195, 373, 840 |
| MhlI | GDGCHC | 3 cut(s) | 491, 629, 1294 |
| MlyI | GAGTC | 2 cut(s) | 132, 935 |
| MmeI | TCCRAC | 1 cut(s) | 244 |
| MroXI | GAANNNNTTC | 1 cut(s) | 531 |
| MseI | TTAA | 4 cut(s) | 33, 149, 327, 1185 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1056 |
| MspA1I | CMGCKG | 1 cut(s) | 616 |
| MspI | CCGG | 1 cut(s) | 837 |
| MspR9I | CCNGG | 3 cut(s) | 127, 551, 838 |
| MunI | CAATTG | 1 cut(s) | 255 |
| MvaI | CCWGG | 2 cut(s) | 127, 551 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1298 |
| NciI | CCSGG | 1 cut(s) | 838 |
| NcoI | CCATGG | 2 cut(s) | 904, 1265 |
| NdeI | CATATG | 1 cut(s) | 1025 |
| NdeII | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| NlaIII | CATG | 9 cut(s) | 113, 217, 311, 468, 572, 908, 964, 1250, 1269 |
| NlaIV | GGNNCC | 3 cut(s) | 207, 842, 1158 |
| NmuCI | GTSAC | 2 cut(s) | 553, 1012 |
| NspI | RCATGY | 1 cut(s) | 311 |
| PaeI | GCATGC | 1 cut(s) | 311 |
| PaeR7I | CTCGAG | 1 cut(s) | 628 |
| PagI | TCATGA | 2 cut(s) | 960, 1246 |
| PceI | AGGCCT | 1 cut(s) | 853 |
| PciSI | GCTCTTC | 1 cut(s) | 1136 |
| PdmI | GAANNNNTTC | 1 cut(s) | 531 |
| PfeI | GAWTC | 2 cut(s) | 909, 1037 |
| PkrI | GCNGC | 3 cut(s) | 265, 337, 835 |
| PleI | GAGTC | 2 cut(s) | 132, 935 |
| PpsI | GAGTC | 2 cut(s) | 132, 935 |
| Psp124BI | GAGCTC | 1 cut(s) | 629 |
| Psp6I | CCWGG | 2 cut(s) | 125, 549 |
| PspEI | GGTNACC | 2 cut(s) | 553, 1012 |
| PspGI | CCWGG | 2 cut(s) | 125, 549 |
| PspN4I | GGNNCC | 3 cut(s) | 207, 842, 1158 |
| PspPI | GGNCC | 2 cut(s) | 4, 272 |
| PspXI | VCTCGAGB | 1 cut(s) | 628 |
| PstI | CTGCAG | 1 cut(s) | 85 |
| PsuI | RGATCY | 3 cut(s) | 195, 373, 840 |
| PvuII | CAGCTG | 1 cut(s) | 616 |
| RsaI | GTAC | 3 cut(s) | 124, 302, 790 |
| RsaNI | GTAC | 3 cut(s) | 123, 301, 789 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1056 |
| SacI | GAGCTC | 1 cut(s) | 629 |
| SapI | GCTCTTC | 1 cut(s) | 1136 |
| SaqAI | TTAA | 4 cut(s) | 33, 149, 327, 1185 |
| SatI | GCNGC | 3 cut(s) | 264, 336, 834 |
| Sau3AI | GATC | 5 cut(s) | 195, 373, 537, 840, 1048 |
| Sau96I | GGNCC | 2 cut(s) | 4, 272 |
| SchI | GAGTC | 2 cut(s) | 132, 935 |
| ScrFI | CCNGG | 3 cut(s) | 127, 551, 838 |
| SduI | GDGCHC | 3 cut(s) | 491, 629, 1294 |
| SexAI | ACCWGGT | 1 cut(s) | 549 |
| SfaNI | GCATC | 3 cut(s) | 358, 1078, 1323 |
| SfcI | CTRYAG | 1 cut(s) | 81 |
| Sfr274I | CTCGAG | 1 cut(s) | 628 |
| SinI | GGWCC | 1 cut(s) | 272 |
| SlaI | CTCGAG | 1 cut(s) | 628 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1056 |
| SmlI | CTYRAG | 3 cut(s) | 380, 628, 734 |
| SmoI | CTYRAG | 3 cut(s) | 380, 628, 734 |
| SphI | GCATGC | 1 cut(s) | 311 |
| SseBI | AGGCCT | 1 cut(s) | 853 |
| SsiI | CCGC | 1 cut(s) | 164 |
| SspMI | CTAG | 4 cut(s) | 758, 771, 855, 1298 |
| SstI | GAGCTC | 1 cut(s) | 629 |
| StuI | AGGCCT | 1 cut(s) | 853 |
| StyD4I | CCNGG | 3 cut(s) | 125, 549, 836 |
| StyI | CCWWGG | 4 cut(s) | 904, 1102, 1265, 1285 |
| TaaI | ACNGT | 4 cut(s) | 356, 1211, 1273, 1327 |
| TaiI | ACGT | 1 cut(s) | 819 |
| TaqI | TCGA | 7 cut(s) | 237, 629, 663, 944, 1035, 1047, 1310 |
| TaqII | GACCGA | 1 cut(s) | 260 |
| TfiI | GAWTC | 2 cut(s) | 909, 1037 |
| Tru1I | TTAA | 4 cut(s) | 33, 149, 327, 1185 |
| Tru9I | TTAA | 4 cut(s) | 33, 149, 327, 1185 |
| TscAI | CASTG | 2 cut(s) | 501, 1153 |
| TseFI | GTSAC | 2 cut(s) | 553, 1012 |
| TseI | GCWGC | 3 cut(s) | 263, 335, 833 |
| Tsp45I | GTSAC | 2 cut(s) | 553, 1012 |
| TspRI | CASTG | 2 cut(s) | 501, 1153 |
| VpaK11BI | GGWCC | 1 cut(s) | 272 |
| XapI | RAATTY | 4 cut(s) | 233, 455, 500, 529 |
| XceI | RCATGY | 1 cut(s) | 311 |
| XhoI | CTCGAG | 1 cut(s) | 628 |
| XmiI | GTMKAC | 1 cut(s) | 936 |
| XmnI | GAANNNNTTC | 1 cut(s) | 531 |
| XspI | CTAG | 4 cut(s) | 758, 771, 855, 1298 |