Prupe.7G046000_v2.0.a1

Plant protein of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0001605
Physical Location & Seq
Forward (+)
8198775 .. 8201075
2301 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G046000.1

Sequence Viewer

Length: 1542 bp
ATGGGGGAGGTAAGGGAAAGTCGTAAGGAGAAGAGATTCAAAAAATTGAGGGATGCGCCAAAAAGTCCAATACCCAGCTCGCAACCGAAGATCCAAAAGGTTCCCTTCATGCTCCGGGATCACAAAAATTTCGACAAATACTATGTGCCAAGGGCAGTAGCAATTGGCCCTTTCCATCATGGTAATCCAAGGTGCAAGCTGGCACAAAAATACAAGCTTATGTTGACATTAAAGTTTGCCGACTTTGTTGGCCAGAAAGATGAAGATTTGTATAAGAAGATTGAGGAGAAGATCAAAGAACTAAGGGAATGCTACGTCAAGGAAGCAACAGAGCACATTGATGATGGTACCCTCGCCTGGATGTTGTTCTTAGATGGGTGTTCAACCTTACAATTCATATACTCCCTCATGAACGAGCATGAAGAGTTTGAGATCAAAAGAGACCAGGTAGCCTTTGCACAGCAAGACTTATTCTTGCTGGAGAATCAAATCCCATATCAAGTCCTCGAGCTGTTGATGAGCTCAAGCGACAAACGTGAGGTTTTGAAGCACGCAATCGAGAGTTTTGTTCAGATGCACATTATTGTACCCGTAGAGAAGCAATCAAAAGGGCAGGAACAGAAGCACCAACCAGGAATAACAGAAAACAGGGAACAGAAGCAAGAACCAGACACAACATCAAGCACGGAACATAAGGTAGACATAACAGAAAACACAGAAACAAAGCAACAAGATGGCTTAACAACAGACACTGACCAGAAGCAACAACCAGGCGTAACAACAGACGCGAATCATAAGCAACAACCAGGCGTAACAACGGACGCGAATCAGAAGCAACAACCAGAAGAGCCCACTCATCTTCTTGACCTTCTGCGCAAAAGAATTCTAGGTCCACCAAAAAAGGATGTTTCAAAGAAAAAAGTTGGAGAGTCCCCTAAACAAACTTTTCGCAATGTGCAGGAGCTTAGTGCAGCCGGGATACATTTTCAGCCCAGTAAGACTAACTTCTTGGGGGACATATCTTTTAAGTCTCATTGCTTTGCAGGATTCCTTAGTCTTCCTCCAATATCAGTAGACGACTCAACAGGGCCTAAGTTCATGAATTTGATAGCCTATGAAATGTGTCCTGATTTCCAAAATGATTACGGGGTTGCCTCTTACATAGGTTTCCTCGATGCACTCATTGATCATGCTGACGATGTTAAGAAGCTAAGGTCAGCTTCTGTACTGTTCAACTTTCTGGGGAGTGATAAGGAGGTGGCTCAACTCTTCAATGAGATAGGCACTGACTTGGTGCCTAACACTGCCATATACCTCAGAGTTAAAGCCGAATTAGAAAAGCACTACAAAACCAAGTGGAAGACCTGGATGTCTCAGTTCTGTCACGATCATTTCAGTAGCCCCTGGACTATCCTGGCTTTCCTTGGGGTCTTATCAGCACTTGGGTTAAGCGGCATCCAGACTTGGTACACAGTCCCTTCTCAACCCTCTCCCTGTGAGGCTGTATGCCAGTACTTGAAAACATGGCTACACATAACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF247

Protein Analysis

514

Amino Acids

58.75

Weight (kDa)

6.66

Isoelectric Point (pI)

47.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1369
Acc16I TGCGCA 1 cut(s) 875
Acc65I GGTACC 1 cut(s) 347
AccB1I GGYRCC 2 cut(s) 347, 1294
AccI GTMKAC 2 cut(s) 699, 1074
AccII CGCG 2 cut(s) 788, 824
AciI CCGC 1 cut(s) 1452
AclWI GGATC 2 cut(s) 85, 126
AcoI YGGCCR 1 cut(s) 250
AcsI RAATTY 3 cut(s) 127, 882, 1102
AfaI GTAC 5 cut(s) 349, 588, 1227, 1469, 1514
AfiI CCNNNNNNNGG 1 cut(s) 357
AgsI TTSAA 7 cut(s) 40, 384, 547, 912, 1234, 1273, 1519
AjnI CCWGG 8 cut(s) 356, 444, 631, 769, 805, 1364, 1403, 1413
AluBI AGCT 8 cut(s) 78, 199, 217, 511, 522, 964, 1210, 1220
AluI AGCT 8 cut(s) 78, 199, 217, 511, 522, 964, 1210, 1220
Alw21I GWGCWC 2 cut(s) 336, 524
Alw26I GTCTC 3 cut(s) 435, 1035, 1377
AlwI GGATC 2 cut(s) 85, 126
AlwNI CAGNNNCTG 2 cut(s) 752, 1223
Ama87I CYCGRG 1 cut(s) 506
AoxI GGCC 3 cut(s) 166, 250, 1088
ApeKI GCWGC 1 cut(s) 971
ApoI RAATTY 3 cut(s) 127, 882, 1102
Asp700I GAANNNNTTC 1 cut(s) 35
Asp718I GGTACC 1 cut(s) 347
AspLEI GCGC 2 cut(s) 58, 876
AspS9I GGNCC 3 cut(s) 167, 890, 1088
AsuC2I CCSGG 2 cut(s) 116, 976
AvaI CYCGRG 1 cut(s) 506
AvaII GGWCC 1 cut(s) 890
BalI TGGCCA 1 cut(s) 252
BanI GGYRCC 2 cut(s) 347, 1294
BanII GRGCYC 2 cut(s) 524, 852
BbsI GAAGAC 2 cut(s) 1049, 1367
Bbv12I GWGCWC 2 cut(s) 336, 524
BbvI GCAGC 1 cut(s) 983
BccI CCATC 4 cut(s) 183, 338, 368, 728
BciT130I CCWGG 8 cut(s) 358, 446, 633, 771, 807, 1366, 1405, 1415
BciVI GTATCC 1 cut(s) 972
BclI TGATCA 1 cut(s) 1186
BcnI CCSGG 2 cut(s) 116, 976
BcoDI GTCTC 3 cut(s) 435, 1035, 1377
BfaI CTAG 1 cut(s) 887
BfuI GTATCC 1 cut(s) 972
BisI GCNGC 2 cut(s) 972, 1453
BlsI GCNGC 2 cut(s) 973, 1454
BmcAI AGTACT 1 cut(s) 1514
Bme18I GGWCC 1 cut(s) 890
BmeT110I CYCGRG 1 cut(s) 506
BmgT120I GGNCC 3 cut(s) 167, 890, 1088
BmiI GGNNCC 3 cut(s) 102, 349, 1296
BmrI ACTGGG 1 cut(s) 987
BmsI GCATC 4 cut(s) 43, 564, 1165, 1464
BmuI ACTGGG 1 cut(s) 987
BpiI GAAGAC 2 cut(s) 1049, 1367
BpmI CTGGAG 1 cut(s) 500
Bpu10I CCTNAGC 1 cut(s) 1211
BpuEI CTTGAG 1 cut(s) 508
BpuMI CCSGG 2 cut(s) 116, 976
BsaI GGTCTC 1 cut(s) 435
BsaJI CCNNGG 4 cut(s) 149, 188, 1403, 1423
Bsc4I CCNNNNNNNGG 1 cut(s) 357
Bse1I ACTGG 2 cut(s) 993, 1510
Bse3DI GCAATG 2 cut(s) 958, 1033
BseBI CCWGG 8 cut(s) 358, 446, 633, 771, 807, 1366, 1405, 1415
BseDI CCNNGG 4 cut(s) 149, 188, 1403, 1423
BseGI GGATG 5 cut(s) 58, 366, 910, 1374, 1455
BseLI CCNNNNNNNGG 1 cut(s) 357
BseMI GCAATG 2 cut(s) 958, 1033
BseMII CTCAG 2 cut(s) 1330, 1388
BseNI ACTGG 2 cut(s) 993, 1510
BseRI GAGGAG 1 cut(s) 299
BseXI GCAGC 1 cut(s) 983
BseYI CCCAGC 1 cut(s) 74
BsgI GTGCAG 2 cut(s) 977, 990
Bsh1236I CGCG 2 cut(s) 788, 824
BshFI GGCC 3 cut(s) 168, 252, 1090
BshNI GGYRCC 2 cut(s) 347, 1294
BsiHKAI GWGCWC 2 cut(s) 336, 524
BsiHKCI CYCGRG 1 cut(s) 506
BsiSI CCGG 2 cut(s) 115, 975
BslFI GGGAC 3 cut(s) 916, 1028, 1460
BslI CCNNNNNNNGG 1 cut(s) 357
BsmAI GTCTC 3 cut(s) 435, 1035, 1377
BsmFI GGGAC 3 cut(s) 916, 1028, 1460
BsmI GAATGC 1 cut(s) 314
BsnI GGCC 3 cut(s) 168, 252, 1090
Bso31I GGTCTC 1 cut(s) 435
BsoBI CYCGRG 1 cut(s) 506
Bsp1286I GDGCHC 3 cut(s) 336, 524, 852
Bsp143I GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
BspACI CCGC 1 cut(s) 1452
BspANI GGCC 3 cut(s) 168, 252, 1090
BspCNI CTCAG 2 cut(s) 1329, 1387
BspFNI CGCG 2 cut(s) 788, 824
BspHI TCATGA 2 cut(s) 408, 1098
BspLI GGNNCC 3 cut(s) 102, 349, 1296
BspPI GGATC 2 cut(s) 85, 126
BspQI GCTCTTC 1 cut(s) 840
BspT107I GGYRCC 2 cut(s) 347, 1294
BspTNI GGTCTC 1 cut(s) 435
BsrDI GCAATG 2 cut(s) 958, 1033
BsrI ACTGG 2 cut(s) 993, 1510
BssECI CCNNGG 4 cut(s) 149, 188, 1403, 1423
BssMI GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
BssT1I CCWWGG 3 cut(s) 149, 188, 1423
Bst2UI CCWGG 8 cut(s) 358, 446, 633, 771, 807, 1366, 1405, 1415
Bst4CI ACNGT 2 cut(s) 1230, 1474
Bst6I CTCTTC 4 cut(s) 26, 417, 840, 1274
BstC8I GCNNGC 4 cut(s) 80, 197, 201, 552
BstDEI CTNAG 8 cut(s) 302, 370, 965, 1052, 1092, 1211, 1316, 1374
BstF5I GGATG 5 cut(s) 58, 366, 910, 1374, 1455
BstFNI CGCG 2 cut(s) 788, 824
BstHHI GCGC 2 cut(s) 58, 876
BstKTI GATC 6 cut(s) 93, 121, 294, 435, 1189, 1390
BstMAI GTCTC 3 cut(s) 435, 1035, 1377
BstMBI GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
BstNI CCWGG 8 cut(s) 358, 446, 633, 771, 807, 1366, 1405, 1415
BstUI CGCG 2 cut(s) 788, 824
BstV1I GCAGC 1 cut(s) 983
BstV2I GAAGAC 2 cut(s) 1049, 1367
BstX2I RGATCY 1 cut(s) 90
BstYI RGATCY 1 cut(s) 90
BsuI GTATCC 1 cut(s) 972
BsuRI GGCC 3 cut(s) 168, 252, 1090
BtsCI GGATG 5 cut(s) 58, 366, 910, 1374, 1455
BtsI GCAGTG 1 cut(s) 1302
BtsIMutI CAGTG 3 cut(s) 750, 1284, 1302
Cac8I GCNNGC 4 cut(s) 80, 197, 201, 552
CaiI CAGNNNCTG 2 cut(s) 752, 1223
CciI TCATGA 2 cut(s) 408, 1098
CfoI GCGC 2 cut(s) 58, 876
Cfr13I GGNCC 3 cut(s) 167, 890, 1088
CseI GACGC 2 cut(s) 794, 830
CsiI ACCWGGT 1 cut(s) 444
Csp6I GTAC 5 cut(s) 348, 587, 1226, 1468, 1513
CviAII CATG 7 cut(s) 109, 179, 409, 419, 1099, 1190, 1524
CviQI GTAC 5 cut(s) 348, 587, 1226, 1468, 1513
DdeI CTNAG 8 cut(s) 302, 370, 965, 1052, 1092, 1211, 1316, 1374
DpnI GATC 6 cut(s) 92, 120, 293, 434, 1188, 1389
DpnII GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
DrdI GACNNNNNNGTC 1 cut(s) 1369
DseDI GACNNNNNNGTC 1 cut(s) 1369
EaeI YGGCCR 1 cut(s) 250
Eam1104I CTCTTC 4 cut(s) 26, 417, 840, 1274
EarI CTCTTC 4 cut(s) 26, 417, 840, 1274
Ecl136II GAGCTC 1 cut(s) 522
Eco130I CCWWGG 3 cut(s) 149, 188, 1423
Eco24I GRGCYC 2 cut(s) 524, 852
Eco31I GGTCTC 1 cut(s) 435
Eco47I GGWCC 1 cut(s) 890
Eco53kI GAGCTC 1 cut(s) 522
Eco88I CYCGRG 1 cut(s) 506
EcoICRI GAGCTC 1 cut(s) 522
EcoO109I RGGNCCY 1 cut(s) 1088
EcoRI GAATTC 1 cut(s) 882
EcoRII CCWGG 8 cut(s) 356, 444, 631, 769, 805, 1364, 1403, 1413
EcoT14I CCWWGG 3 cut(s) 149, 188, 1423
EcoT38I GRGCYC 2 cut(s) 524, 852
ErhI CCWWGG 3 cut(s) 149, 188, 1423
FaeI CATG 7 cut(s) 112, 182, 412, 422, 1102, 1193, 1527
FalI AAGNNNNNCTT 6 cut(s) 89, 121, 989, 1021, 1204, 1236
FaqI GGGAC 3 cut(s) 916, 1028, 1460
FatI CATG 7 cut(s) 108, 178, 408, 418, 1098, 1189, 1523
FbaI TGATCA 1 cut(s) 1186
FblI GTMKAC 2 cut(s) 699, 1074
Fnu4HI GCNGC 2 cut(s) 972, 1453
FokI GGATG 5 cut(s) 65, 373, 917, 1381, 1442
FriOI GRGCYC 2 cut(s) 524, 852
Fsp4HI GCNGC 2 cut(s) 972, 1453
FspBI CTAG 1 cut(s) 887
FspI TGCGCA 1 cut(s) 875
GlaI GCGC 2 cut(s) 57, 875
GluI GCNGC 2 cut(s) 972, 1453
GsaI CCCAGC 1 cut(s) 78
GsuI CTGGAG 1 cut(s) 500
HaeIII GGCC 3 cut(s) 168, 252, 1090
HapII CCGG 2 cut(s) 115, 975
HgaI GACGC 2 cut(s) 794, 830
HhaI GCGC 2 cut(s) 58, 876
Hin1II CATG 7 cut(s) 112, 182, 412, 422, 1102, 1193, 1527
Hin6I GCGC 2 cut(s) 56, 874
HinP1I GCGC 2 cut(s) 56, 874
HincII GTYRAC 1 cut(s) 225
HindII GTYRAC 1 cut(s) 225
HindIII AAGCTT 1 cut(s) 215
HinfI GANTC 7 cut(s) 36, 484, 790, 826, 929, 1047, 1079
HpaII CCGG 2 cut(s) 115, 975
Hpy166II GTNNAC 5 cut(s) 225, 700, 893, 1075, 1470
Hpy188I TCNGA 3 cut(s) 573, 831, 1319
Hpy188III TCNNGA 7 cut(s) 409, 559, 863, 1099, 1127, 1385, 1459
Hpy8I GTNNAC 5 cut(s) 225, 700, 893, 1075, 1470
HpyAV CCTTC 3 cut(s) 115, 878, 1488
HpyCH4III ACNGT 2 cut(s) 1230, 1474
HpyCH4IV ACGT 2 cut(s) 315, 535
HpyCH4V TGCA 7 cut(s) 195, 458, 577, 958, 971, 1043, 1178
HpyF3I CTNAG 8 cut(s) 302, 370, 965, 1052, 1092, 1211, 1316, 1374
HpySE526I ACGT 2 cut(s) 315, 535
Hsp92II CATG 7 cut(s) 112, 182, 412, 422, 1102, 1193, 1527
HspAI GCGC 2 cut(s) 56, 874
KpnI GGTACC 1 cut(s) 351
Ksp22I TGATCA 1 cut(s) 1186
Kzo9I GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
LguI GCTCTTC 1 cut(s) 840
LmnI GCTCC 2 cut(s) 117, 961
Lsp1109I GCAGC 1 cut(s) 983
LweI GCATC 4 cut(s) 43, 564, 1165, 1464
MabI ACCWGGT 1 cut(s) 444
MaeI CTAG 1 cut(s) 887
MaeII ACGT 2 cut(s) 315, 535
MaeIII GTNAC 3 cut(s) 775, 811, 1382
MalI GATC 6 cut(s) 92, 120, 293, 434, 1188, 1389
MboI GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
MfeI CAATTG 1 cut(s) 162
MflI RGATCY 1 cut(s) 90
MhlI GDGCHC 3 cut(s) 336, 524, 852
MlsI TGGCCA 1 cut(s) 252
MluCI AATT 7 cut(s) 44, 127, 162, 392, 882, 1102, 1331
MluNI TGGCCA 1 cut(s) 252
MlyI GAGTC 2 cut(s) 938, 1073
MmeI TCCRAC 1 cut(s) 904
Mox20I TGGCCA 1 cut(s) 252
MroXI GAANNNNTTC 1 cut(s) 35
MscI TGGCCA 1 cut(s) 252
MseI TTAA 6 cut(s) 230, 740, 1026, 1203, 1323, 1448
MslI CAYNNNNRTG 1 cut(s) 339
Msp20I TGGCCA 1 cut(s) 252
MspI CCGG 2 cut(s) 115, 975
MunI CAATTG 1 cut(s) 162
Mva1269I GAATGC 1 cut(s) 314
MvaI CCWGG 8 cut(s) 358, 446, 633, 771, 807, 1366, 1405, 1415
MvnI CGCG 2 cut(s) 788, 824
NciI CCSGG 2 cut(s) 116, 976
NdeII GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
NlaIII CATG 7 cut(s) 112, 182, 412, 422, 1102, 1193, 1527
NlaIV GGNNCC 3 cut(s) 102, 349, 1296
NmuCI GTSAC 1 cut(s) 1382
NsbI TGCGCA 1 cut(s) 875
PaeR7I CTCGAG 1 cut(s) 506
PagI TCATGA 2 cut(s) 408, 1098
PciSI GCTCTTC 1 cut(s) 840
PctI GAATGC 1 cut(s) 314
PdmI GAANNNNTTC 1 cut(s) 35
PfeI GAWTC 5 cut(s) 36, 484, 790, 826, 1047
PfoI TCCNGGA 1 cut(s) 114
PkrI GCNGC 2 cut(s) 973, 1454
PleI GAGTC 2 cut(s) 937, 1073
PpsI GAGTC 2 cut(s) 937, 1073
Psp124BI GAGCTC 1 cut(s) 524
Psp6I CCWGG 8 cut(s) 356, 444, 631, 769, 805, 1364, 1403, 1413
PspFI CCCAGC 1 cut(s) 74
PspGI CCWGG 8 cut(s) 356, 444, 631, 769, 805, 1364, 1403, 1413
PspN4I GGNNCC 3 cut(s) 102, 349, 1296
PspPI GGNCC 3 cut(s) 167, 890, 1088
PspXI VCTCGAGB 1 cut(s) 506
PstNI CAGNNNCTG 2 cut(s) 752, 1223
PsuI RGATCY 1 cut(s) 90
RsaI GTAC 5 cut(s) 349, 588, 1227, 1469, 1514
RsaNI GTAC 5 cut(s) 348, 587, 1226, 1468, 1513
RseI CAYNNNNRTG 1 cut(s) 339
SacI GAGCTC 1 cut(s) 524
SapI GCTCTTC 1 cut(s) 840
SaqAI TTAA 6 cut(s) 230, 740, 1026, 1203, 1323, 1448
SatI GCNGC 2 cut(s) 972, 1453
Sau3AI GATC 6 cut(s) 90, 118, 291, 432, 1186, 1387
Sau96I GGNCC 3 cut(s) 167, 890, 1088
ScaI AGTACT 1 cut(s) 1514
SchI GAGTC 2 cut(s) 938, 1073
SduI GDGCHC 3 cut(s) 336, 524, 852
SexAI ACCWGGT 1 cut(s) 444
SfaNI GCATC 4 cut(s) 43, 564, 1165, 1464
Sfr274I CTCGAG 1 cut(s) 506
SinI GGWCC 1 cut(s) 890
SlaI CTCGAG 1 cut(s) 506
SmiMI CAYNNNNRTG 1 cut(s) 339
SmlI CTYRAG 2 cut(s) 506, 523
SmoI CTYRAG 2 cut(s) 506, 523
Sse9I AATT 7 cut(s) 44, 127, 162, 392, 882, 1102, 1331
SsiI CCGC 1 cut(s) 1452
SspMI CTAG 1 cut(s) 887
SstI GAGCTC 1 cut(s) 524
StyI CCWWGG 3 cut(s) 149, 188, 1423
TaaI ACNGT 2 cut(s) 1230, 1474
TaiI ACGT 2 cut(s) 318, 538
TaqI TCGA 4 cut(s) 132, 507, 558, 1173
TasI AATT 7 cut(s) 44, 127, 162, 392, 882, 1102, 1331
TatI WGTACW 2 cut(s) 1225, 1512
TauI GCSGC 1 cut(s) 1455
TfiI GAWTC 5 cut(s) 36, 484, 790, 826, 1047
Tru1I TTAA 6 cut(s) 230, 740, 1026, 1203, 1323, 1448
Tru9I TTAA 6 cut(s) 230, 740, 1026, 1203, 1323, 1448
TscAI CASTG 3 cut(s) 757, 1291, 1309
TseFI GTSAC 1 cut(s) 1382
TseI GCWGC 1 cut(s) 971
Tsp45I GTSAC 1 cut(s) 1382
TspDTI ATGAA 8 cut(s) 97, 276, 385, 425, 435, 1087, 1115, 1131
TspGWI ACGGA 2 cut(s) 701, 833
TspRI CASTG 3 cut(s) 757, 1291, 1309
VpaK11BI GGWCC 1 cut(s) 890
XapI RAATTY 3 cut(s) 127, 882, 1102
XhoI CTCGAG 1 cut(s) 506
XmiI GTMKAC 2 cut(s) 699, 1074
XmnI GAANNNNTTC 1 cut(s) 35
XspI CTAG 1 cut(s) 887
ZrmI AGTACT 1 cut(s) 1514
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.