UPF0481 protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 291 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1082, 1247 |
| AccB1I | GGYRCC | 1 cut(s) | 1228 |
| AccI | GTMKAC | 1 cut(s) | 1008 |
| AccII | CGCG | 1 cut(s) | 1158 |
| AccIII | TCCGGA | 1 cut(s) | 798 |
| AciI | CCGC | 5 cut(s) | 357, 663, 871, 896, 1386 |
| AclWI | GGATC | 3 cut(s) | 145, 895, 908 |
| AcoI | YGGCCR | 2 cut(s) | 358, 856 |
| AcsI | RAATTY | 4 cut(s) | 235, 341, 1036, 1200 |
| AcuI | CTGAAG | 2 cut(s) | 431, 870 |
| AfaI | GTAC | 5 cut(s) | 1161, 1219, 1277, 1403, 1448 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 648, 823 |
| AflII | CTTAAG | 1 cut(s) | 634 |
| AflIII | ACRYGT | 2 cut(s) | 737, 1156 |
| AjiI | CACGTC | 1 cut(s) | 740 |
| AjnI | CCWGG | 4 cut(s) | 745, 1298, 1337, 1347 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 74, 106 |
| Alw26I | GTCTC | 1 cut(s) | 930 |
| AlwI | GGATC | 3 cut(s) | 145, 895, 908 |
| Ama87I | CYCGRG | 1 cut(s) | 788 |
| Aor13HI | TCCGGA | 1 cut(s) | 798 |
| AoxI | GGCC | 6 cut(s) | 358, 456, 660, 814, 856, 1022 |
| ApeKI | GCWGC | 3 cut(s) | 698, 893, 1370 |
| ApoI | RAATTY | 4 cut(s) | 235, 341, 1036, 1200 |
| AspS9I | GGNCC | 5 cut(s) | 275, 441, 457, 815, 927 |
| AsuHPI | GGTGA | 3 cut(s) | 182, 221, 1078 |
| AsuNHI | GCTAGC | 1 cut(s) | 121 |
| AvaI | CYCGRG | 1 cut(s) | 788 |
| AvaII | GGWCC | 3 cut(s) | 275, 441, 927 |
| BamHI | GGATCC | 1 cut(s) | 900 |
| BanI | GGYRCC | 1 cut(s) | 1228 |
| BanII | GRGCYC | 1 cut(s) | 777 |
| BbsI | GAAGAC | 2 cut(s) | 21, 357 |
| BbvI | GCAGC | 3 cut(s) | 710, 905, 1382 |
| BccI | CCATC | 5 cut(s) | 291, 476, 665, 848, 1297 |
| BceAI | ACGGC | 1 cut(s) | 345 |
| BciT130I | CCWGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| BclI | TGATCA | 2 cut(s) | 1120, 1321 |
| BcoDI | GTCTC | 1 cut(s) | 930 |
| BfaI | CTAG | 6 cut(s) | 122, 590, 812, 959, 968, 1367 |
| BfmI | CTRYAG | 1 cut(s) | 1330 |
| BfrI | CTTAAG | 1 cut(s) | 634 |
| BisI | GCNGC | 6 cut(s) | 358, 663, 699, 894, 1371, 1387 |
| BlsI | GCNGC | 6 cut(s) | 359, 664, 700, 895, 1372, 1388 |
| BmcAI | AGTACT | 2 cut(s) | 1277, 1448 |
| Bme1390I | CCNGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| Bme18I | GGWCC | 3 cut(s) | 275, 441, 927 |
| BmeT110I | CYCGRG | 1 cut(s) | 788 |
| BmgBI | CACGTC | 1 cut(s) | 740 |
| BmgT120I | GGNCC | 5 cut(s) | 275, 441, 457, 815, 927 |
| BmiI | GGNNCC | 6 cut(s) | 162, 201, 817, 902, 928, 1230 |
| BmrFI | CCNGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| BmsI | GCATC | 3 cut(s) | 60, 1398, 1423 |
| BmtI | GCTAGC | 1 cut(s) | 125 |
| BpiI | GAAGAC | 2 cut(s) | 21, 357 |
| BpmI | CTGGAG | 1 cut(s) | 24 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1145 |
| BpuEI | CTTGAG | 2 cut(s) | 602, 952 |
| Bsa29I | ATCGAT | 1 cut(s) | 669 |
| BsaJI | CCNNGG | 4 cut(s) | 257, 296, 1337, 1357 |
| BsaWI | WCCGGW | 1 cut(s) | 798 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 74, 104, 512, 542, 741, 771 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 648, 823 |
| Bse1I | ACTGG | 3 cut(s) | 312, 336, 1225 |
| BseAI | TCCGGA | 1 cut(s) | 798 |
| BseBI | CCWGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| BseCI | ATCGAT | 1 cut(s) | 669 |
| BseDI | CCNNGG | 4 cut(s) | 257, 296, 1337, 1357 |
| BseGI | GGATG | 4 cut(s) | 491, 952, 1308, 1389 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 648, 823 |
| BseMII | CTCAG | 1 cut(s) | 140 |
| BseNI | ACTGG | 3 cut(s) | 312, 336, 1225 |
| BseRI | GAGGAG | 1 cut(s) | 98 |
| BseX3I | CGGCCG | 1 cut(s) | 358 |
| BseXI | GCAGC | 3 cut(s) | 710, 905, 1382 |
| Bsh1236I | CGCG | 1 cut(s) | 1158 |
| Bsh1285I | CGRYCG | 1 cut(s) | 361 |
| BshFI | GGCC | 6 cut(s) | 360, 458, 662, 816, 858, 1024 |
| BshNI | GGYRCC | 1 cut(s) | 1228 |
| BshVI | ATCGAT | 1 cut(s) | 669 |
| BsiEI | CGRYCG | 1 cut(s) | 361 |
| BsiHKCI | CYCGRG | 1 cut(s) | 788 |
| BsiSI | CCGG | 1 cut(s) | 799 |
| BslFI | GGGAC | 1 cut(s) | 940 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 648, 823 |
| BsmAI | GTCTC | 1 cut(s) | 930 |
| BsmFI | GGGAC | 1 cut(s) | 940 |
| BsnI | GGCC | 6 cut(s) | 360, 458, 662, 816, 858, 1024 |
| BsoBI | CYCGRG | 1 cut(s) | 788 |
| Bsp1286I | GDGCHC | 1 cut(s) | 777 |
| Bsp13I | TCCGGA | 1 cut(s) | 798 |
| BspACI | CCGC | 5 cut(s) | 357, 663, 871, 896, 1386 |
| BspANI | GGCC | 6 cut(s) | 360, 458, 662, 816, 858, 1024 |
| BspCNI | CTCAG | 1 cut(s) | 139 |
| BspDI | ATCGAT | 1 cut(s) | 669 |
| BspEI | TCCGGA | 1 cut(s) | 798 |
| BspFNI | CGCG | 1 cut(s) | 1158 |
| BspHI | TCATGA | 1 cut(s) | 1318 |
| BspLI | GGNNCC | 6 cut(s) | 162, 201, 817, 902, 928, 1230 |
| BspOI | GCTAGC | 1 cut(s) | 125 |
| BspPI | GGATC | 3 cut(s) | 145, 895, 908 |
| BspQI | GCTCTTC | 1 cut(s) | 765 |
| BspT107I | GGYRCC | 1 cut(s) | 1228 |
| BspTI | CTTAAG | 1 cut(s) | 634 |
| BsrI | ACTGG | 3 cut(s) | 312, 336, 1225 |
| BssECI | CCNNGG | 4 cut(s) | 257, 296, 1337, 1357 |
| BssT1I | CCWWGG | 3 cut(s) | 257, 296, 1357 |
| Bst2UI | CCWGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| Bst4CI | ACNGT | 2 cut(s) | 501, 1238 |
| Bst6I | CTCTTC | 2 cut(s) | 765, 1182 |
| BstAFI | CTTAAG | 1 cut(s) | 634 |
| BstC8I | GCNNGC | 4 cut(s) | 123, 327, 1156, 1429 |
| BstDEI | CTNAG | 6 cut(s) | 126, 173, 212, 478, 1026, 1145 |
| BstF5I | GGATG | 4 cut(s) | 491, 952, 1308, 1389 |
| BstFNI | CGCG | 1 cut(s) | 1158 |
| BstMAI | GTCTC | 1 cut(s) | 930 |
| BstMCI | CGRYCG | 1 cut(s) | 361 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1433 |
| BstNI | CCWGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| BstNSI | RCATGY | 2 cut(s) | 172, 211 |
| BstSCI | CCNGG | 4 cut(s) | 745, 1298, 1337, 1347 |
| BstSFI | CTRYAG | 1 cut(s) | 1330 |
| BstUI | CGCG | 1 cut(s) | 1158 |
| BstV1I | GCAGC | 3 cut(s) | 710, 905, 1382 |
| BstV2I | GAAGAC | 2 cut(s) | 21, 357 |
| BstX2I | RGATCY | 2 cut(s) | 150, 900 |
| BstYI | RGATCY | 2 cut(s) | 150, 900 |
| BstZI | CGGCCG | 1 cut(s) | 358 |
| Bsu15I | ATCGAT | 1 cut(s) | 669 |
| BsuRI | GGCC | 6 cut(s) | 360, 458, 662, 816, 858, 1024 |
| BsuTUI | ATCGAT | 1 cut(s) | 669 |
| BtgZI | GCGATG | 1 cut(s) | 1446 |
| BtrI | CACGTC | 1 cut(s) | 740 |
| BtsCI | GGATG | 4 cut(s) | 491, 952, 1308, 1389 |
| BtsIMutI | CAGTG | 4 cut(s) | 329, 407, 1243, 1258 |
| Cac8I | GCNNGC | 4 cut(s) | 123, 327, 1156, 1429 |
| CciI | TCATGA | 1 cut(s) | 1318 |
| Cfr13I | GGNCC | 5 cut(s) | 275, 441, 457, 815, 927 |
| ClaI | ATCGAT | 1 cut(s) | 669 |
| Csp6I | GTAC | 5 cut(s) | 1160, 1218, 1276, 1402, 1447 |
| CviAII | CATG | 9 cut(s) | 28, 169, 208, 517, 694, 766, 1018, 1124, 1319 |
| CviQI | GTAC | 5 cut(s) | 1160, 1218, 1276, 1402, 1447 |
| DdeI | CTNAG | 6 cut(s) | 126, 173, 212, 478, 1026, 1145 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1082, 1247 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1082, 1247 |
| EaeI | YGGCCR | 2 cut(s) | 358, 856 |
| EagI | CGGCCG | 1 cut(s) | 358 |
| Eam1104I | CTCTTC | 2 cut(s) | 765, 1182 |
| EarI | CTCTTC | 2 cut(s) | 765, 1182 |
| EclXI | CGGCCG | 1 cut(s) | 358 |
| Eco130I | CCWWGG | 3 cut(s) | 257, 296, 1357 |
| Eco147I | AGGCCT | 1 cut(s) | 1024 |
| Eco24I | GRGCYC | 1 cut(s) | 777 |
| Eco47I | GGWCC | 3 cut(s) | 275, 441, 927 |
| Eco52I | CGGCCG | 1 cut(s) | 358 |
| Eco57I | CTGAAG | 2 cut(s) | 431, 870 |
| Eco88I | CYCGRG | 1 cut(s) | 788 |
| EcoO109I | RGGNCCY | 4 cut(s) | 441, 457, 815, 927 |
| EcoRII | CCWGG | 4 cut(s) | 745, 1298, 1337, 1347 |
| EcoT14I | CCWWGG | 3 cut(s) | 257, 296, 1357 |
| EcoT38I | GRGCYC | 1 cut(s) | 777 |
| ErhI | CCWWGG | 3 cut(s) | 257, 296, 1357 |
| FaeI | CATG | 9 cut(s) | 31, 172, 211, 520, 697, 769, 1021, 1127, 1322 |
| FaqI | GGGAC | 1 cut(s) | 940 |
| FatI | CATG | 9 cut(s) | 27, 168, 207, 516, 693, 765, 1017, 1123, 1318 |
| FauI | CCCGC | 1 cut(s) | 889 |
| FauNDI | CATATG | 1 cut(s) | 1097 |
| FbaI | TGATCA | 2 cut(s) | 1120, 1321 |
| FblI | GTMKAC | 1 cut(s) | 1008 |
| Fnu4HI | GCNGC | 6 cut(s) | 358, 663, 699, 894, 1371, 1387 |
| FokI | GGATG | 4 cut(s) | 498, 939, 1315, 1376 |
| FriOI | GRGCYC | 1 cut(s) | 777 |
| Fsp4HI | GCNGC | 6 cut(s) | 358, 663, 699, 894, 1371, 1387 |
| FspBI | CTAG | 6 cut(s) | 122, 590, 812, 959, 968, 1367 |
| GluI | GCNGC | 6 cut(s) | 358, 663, 699, 894, 1371, 1387 |
| GsuI | CTGGAG | 1 cut(s) | 24 |
| HaeIII | GGCC | 6 cut(s) | 360, 458, 662, 816, 858, 1024 |
| HapII | CCGG | 1 cut(s) | 799 |
| Hin1II | CATG | 9 cut(s) | 31, 172, 211, 520, 697, 769, 1021, 1127, 1322 |
| HincII | GTYRAC | 2 cut(s) | 305, 743 |
| HindII | GTYRAC | 2 cut(s) | 305, 743 |
| HindIII | AAGCTT | 1 cut(s) | 323 |
| HinfI | GANTC | 3 cut(s) | 981, 1013, 1109 |
| HpaII | CCGG | 1 cut(s) | 799 |
| HphI | GGTGA | 3 cut(s) | 182, 221, 1078 |
| Hpy166II | GTNNAC | 4 cut(s) | 305, 743, 1009, 1404 |
| Hpy188I | TCNGA | 4 cut(s) | 187, 226, 826, 850 |
| Hpy8I | GTNNAC | 4 cut(s) | 305, 743, 1009, 1404 |
| HpyAV | CCTTC | 4 cut(s) | 406, 523, 652, 678 |
| HpyCH4III | ACNGT | 2 cut(s) | 501, 1238 |
| HpyCH4IV | ACGT | 2 cut(s) | 739, 1248 |
| HpyCH4V | TGCA | 4 cut(s) | 329, 379, 569, 1127 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1433 |
| HpyF3I | CTNAG | 6 cut(s) | 126, 173, 212, 478, 1026, 1145 |
| HpySE526I | ACGT | 2 cut(s) | 739, 1248 |
| Hsp92II | CATG | 9 cut(s) | 31, 172, 211, 520, 697, 769, 1021, 1127, 1322 |
| Kpn2I | TCCGGA | 1 cut(s) | 798 |
| Ksp22I | TGATCA | 2 cut(s) | 1120, 1321 |
| LguI | GCTCTTC | 1 cut(s) | 765 |
| LmnI | GCTCC | 4 cut(s) | 43, 48, 107, 883 |
| Lsp1109I | GCAGC | 3 cut(s) | 710, 905, 1382 |
| LweI | GCATC | 3 cut(s) | 60, 1398, 1423 |
| MaeI | CTAG | 6 cut(s) | 122, 590, 812, 959, 968, 1367 |
| MaeII | ACGT | 2 cut(s) | 739, 1248 |
| MaeIII | GTNAC | 2 cut(s) | 1084, 1238 |
| MboII | GAAGA | 9 cut(s) | 26, 362, 383, 776, 782, 863, 983, 1199, 1465 |
| MfeI | CAATTG | 2 cut(s) | 57, 270 |
| MflI | RGATCY | 2 cut(s) | 150, 900 |
| MhlI | GDGCHC | 1 cut(s) | 777 |
| MluCI | AATT | 9 cut(s) | 57, 235, 270, 341, 1036, 1116, 1200, 1265, 1310 |
| MluI | ACGCGT | 1 cut(s) | 1156 |
| MlyI | GAGTC | 1 cut(s) | 1007 |
| MmeI | TCCRAC | 2 cut(s) | 99, 661 |
| MroI | TCCGGA | 1 cut(s) | 798 |
| MseI | TTAA | 7 cut(s) | 626, 635, 888, 908, 1137, 1263, 1382 |
| MslI | CAYNNNNRTG | 2 cut(s) | 764, 1128 |
| MspA1I | CMGCKG | 3 cut(s) | 357, 896, 1462 |
| MspCI | CTTAAG | 1 cut(s) | 634 |
| MspI | CCGG | 1 cut(s) | 799 |
| MspR9I | CCNGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| MunI | CAATTG | 2 cut(s) | 57, 270 |
| MvaI | CCWGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| MvnI | CGCG | 1 cut(s) | 1158 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1433 |
| NdeI | CATATG | 1 cut(s) | 1097 |
| NheI | GCTAGC | 1 cut(s) | 121 |
| NlaIII | CATG | 9 cut(s) | 31, 172, 211, 520, 697, 769, 1021, 1127, 1322 |
| NlaIV | GGNNCC | 6 cut(s) | 162, 201, 817, 902, 928, 1230 |
| NmuCI | GTSAC | 2 cut(s) | 1084, 1238 |
| NspI | RCATGY | 2 cut(s) | 172, 211 |
| PaeR7I | CTCGAG | 1 cut(s) | 788 |
| PagI | TCATGA | 1 cut(s) | 1318 |
| PceI | AGGCCT | 1 cut(s) | 1024 |
| PciSI | GCTCTTC | 1 cut(s) | 765 |
| PfeI | GAWTC | 2 cut(s) | 981, 1109 |
| PkrI | GCNGC | 6 cut(s) | 359, 664, 700, 895, 1372, 1388 |
| PleI | GAGTC | 1 cut(s) | 1007 |
| PpsI | GAGTC | 1 cut(s) | 1007 |
| PpuMI | RGGWCCY | 2 cut(s) | 441, 927 |
| PsiI | TTATAA | 1 cut(s) | 291 |
| Psp5II | RGGWCCY | 2 cut(s) | 441, 927 |
| Psp6I | CCWGG | 4 cut(s) | 745, 1298, 1337, 1347 |
| PspGI | CCWGG | 4 cut(s) | 745, 1298, 1337, 1347 |
| PspN4I | GGNNCC | 6 cut(s) | 162, 201, 817, 902, 928, 1230 |
| PspPI | GGNCC | 5 cut(s) | 275, 441, 457, 815, 927 |
| PspPPI | RGGWCCY | 2 cut(s) | 441, 927 |
| PsuI | RGATCY | 2 cut(s) | 150, 900 |
| PvuII | CAGCTG | 1 cut(s) | 1462 |
| RsaI | GTAC | 5 cut(s) | 1161, 1219, 1277, 1403, 1448 |
| RsaNI | GTAC | 5 cut(s) | 1160, 1218, 1276, 1402, 1447 |
| RseI | CAYNNNNRTG | 2 cut(s) | 764, 1128 |
| SapI | GCTCTTC | 1 cut(s) | 765 |
| SaqAI | TTAA | 7 cut(s) | 626, 635, 888, 908, 1137, 1263, 1382 |
| SatI | GCNGC | 6 cut(s) | 358, 663, 699, 894, 1371, 1387 |
| Sau96I | GGNCC | 5 cut(s) | 275, 441, 457, 815, 927 |
| ScaI | AGTACT | 2 cut(s) | 1277, 1448 |
| SchI | GAGTC | 1 cut(s) | 1007 |
| ScrFI | CCNGG | 4 cut(s) | 747, 1300, 1339, 1349 |
| SduI | GDGCHC | 1 cut(s) | 777 |
| SfaNI | GCATC | 3 cut(s) | 60, 1398, 1423 |
| SfcI | CTRYAG | 1 cut(s) | 1330 |
| Sfr274I | CTCGAG | 1 cut(s) | 788 |
| SinI | GGWCC | 3 cut(s) | 275, 441, 927 |
| SlaI | CTCGAG | 1 cut(s) | 788 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 764, 1128 |
| SmlI | CTYRAG | 4 cut(s) | 617, 634, 788, 931 |
| SmoI | CTYRAG | 4 cut(s) | 617, 634, 788, 931 |
| Sse9I | AATT | 9 cut(s) | 57, 235, 270, 341, 1036, 1116, 1200, 1265, 1310 |
| SseBI | AGGCCT | 1 cut(s) | 1024 |
| SsiI | CCGC | 5 cut(s) | 357, 663, 871, 896, 1386 |
| SspMI | CTAG | 6 cut(s) | 122, 590, 812, 959, 968, 1367 |
| StuI | AGGCCT | 1 cut(s) | 1024 |
| StyD4I | CCNGG | 4 cut(s) | 745, 1298, 1337, 1347 |
| StyI | CCWWGG | 3 cut(s) | 257, 296, 1357 |
| TaaI | ACNGT | 2 cut(s) | 501, 1238 |
| TaiI | ACGT | 2 cut(s) | 742, 1251 |
| TaqI | TCGA | 4 cut(s) | 240, 669, 789, 1107 |
| TasI | AATT | 9 cut(s) | 57, 235, 270, 341, 1036, 1116, 1200, 1265, 1310 |
| TatI | WGTACW | 2 cut(s) | 1275, 1446 |
| TauI | GCSGC | 3 cut(s) | 360, 665, 1389 |
| TfiI | GAWTC | 2 cut(s) | 981, 1109 |
| Tru1I | TTAA | 7 cut(s) | 626, 635, 888, 908, 1137, 1263, 1382 |
| Tru9I | TTAA | 7 cut(s) | 626, 635, 888, 908, 1137, 1263, 1382 |
| TscAI | CASTG | 4 cut(s) | 336, 414, 1243, 1258 |
| TseFI | GTSAC | 2 cut(s) | 1084, 1238 |
| TseI | GCWGC | 3 cut(s) | 698, 893, 1370 |
| Tsp45I | GTSAC | 2 cut(s) | 1084, 1238 |
| TspDTI | ATGAA | 7 cut(s) | 27, 44, 48, 493, 505, 1065, 1200 |
| TspGWI | ACGGA | 1 cut(s) | 61 |
| TspRI | CASTG | 4 cut(s) | 336, 414, 1243, 1258 |
| Vha464I | CTTAAG | 1 cut(s) | 634 |
| VpaK11BI | GGWCC | 3 cut(s) | 275, 441, 927 |
| XapI | RAATTY | 4 cut(s) | 235, 341, 1036, 1200 |
| XceI | RCATGY | 2 cut(s) | 172, 211 |
| XhoI | CTCGAG | 1 cut(s) | 788 |
| XmiI | GTMKAC | 1 cut(s) | 1008 |
| XspI | CTAG | 6 cut(s) | 122, 590, 812, 959, 968, 1367 |
| ZrmI | AGTACT | 2 cut(s) | 1277, 1448 |