Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0001488

Physical Location & Seq

Genomic Coordinates Reverse (-)

7306872 .. 7314218

Gene Structure 7347 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1067300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1161 bp

ATGGCGATTGCAGCAGCAGCTGTCATCGTCCCGCTGGGTCTGCTCTTCTTCGTCTCAGGCCTCATCGTCAATCTCATTCAGGCGATTTGCTTCATTCTTATTCGGCCACTGTCTAAGAATACATACAGAAGGATCAACAGAGTAGTGGCAGAATTGTTGTGGCTGGAACTCGTATGGCTTATTGATTGGTGGGCAGGTGTTAAGATCCAAGTGTACACAGACCCTGAAACGTTTTGTTTAATGGGTAAAGAACATGCACTTGTCATGTGCAATCATAGAAGTGATATTGATTGGCTTGTTGGATGGGTCCTGGCTCAGCGGTCAGGTTGCCTTGGGAGCGCCTTAGCTGTAATGAAGAAATCATCAAAGTTCCTTCCGGTCATAGGGTGGTCAATGTGGTTTTCTGAATATCTCTTTTTGGAAAGAAGCTGGGCCAAAGATGAAAGCACTTTAAAGTTAGGTCTTCAACGGTTGAAGGACTACCCTCAGCCCTTTTGGTTGGCTTTGTTTGTAGAAGGAACTCGTTTTACACAGGCCAAGCTTTTAGCAGCACAAGAATATGCAGCCTCAACAGGGCTGCCTGTACCTAGAAATGTTTTGATTCCTCGTACTAAGGGTTTTGTCTCTGCTGTAAGTAATATGCGCTCATTTGTTCCAGCCATATATGATGTAACGGTGGCTATTCCTAAGGCTTCACCTTCACCAACAATGCTAAGACTCTTTGAGGGGCGACCTTCTGTGGTGCATGTGCACATTAAGCGGCATTTAATGAGGGCATTACCTGAAACTGATGATGCTGTTGCCCAGTGGTGTAAAGATATATTTGTGGCAAAGGATGCATTGTTGGATAAACATACAGCAGAGCAAACTTTTGGCGATCAAGAATTGCAAACTACTGGTCGGCCACTAAAGTCTCTTTTGGTTGTTGCGTCTTGGTCATGTCTACTTATTGTGGGGGCTCTGAAGTTCCTCCATTTGTCTTCACTTCTATCCTCGTGGAAGGGTATTGGGTTCTCAACATTGGGTTTGGGCATTGTTACCGTCCTTATGCAGTTCTTGATTCGGTTTTCTCAGTCAGAGCGTTCAACCCCTGCCCCGGTGTCTCCTGCAAAGAACATTAGCAAAGGAGAGTCTTCAGGCAAAGCAGACAAACAGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003841 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0008374 GO:0012505 GO:0016411 GO:0016740 GO:0016746 GO:0016747 GO:0042171 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071617

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04072 map00561 map00564 map01100 map01110 map04072

Pfam Domains

Protein Families

Acyltransf_C Acyltransferase

Protein Analysis

387

Amino Acids

43.01

Weight (kDa)

9.53

Isoelectric Point (pI)

43.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Acyltransferase	PF01553	83 - 228	1.7e-14	Acyltransferase
Acyltransf_C	PF16076	239 - 312	1.4e-23	Acyltransferase C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001488)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57650
fragaria_vesca	FvH4_6g23240 FvH4_6g23240 FvH4_6g23240 FvH4_6g36950 FvH4_6g36960 FvH4_6g36962
malus_domestica	MD12G1066700.v1.1 MD14G1067300.v1.1
prunus_persica	Prupe.7G067600_v2.0.a1
pyrus_communis	pycom12g05810 pycom14g05530
rosa_chinensis	RchiOBHm_Chr2g0149391 RchiOBHm_Chr2g0149421 RchiOBHm_Chr2g0149441 RchiOBHm_Chr2g0149461 RchiOBHm_Chr2g0149471 RchiOBHm_Chr3g0481071
rosa_laevigata	RLG00000020324 RLG00000020404 RLG00000020406 RLG00000020407 RLG00000023423
rosa_multiflora	Rmu_co8437371.1_g000001 Rmu_sc0000873.1_g000022 Rmu_sc0000873.1_g000026 Rmu_sc0000873.1_g000027 Rmu_sc0000873.1_g000029 Rmu_sc0001551.1_g000024 Rmu_sc0002187.1_g000054
rosa_roxburghii	Rroxscaffold_2G00098120 Rroxscaffold_2G00098130 Rroxscaffold_6G00400660
rosa_rugosa	Rorug03G0190000 Rorug03G0190100 Rorug04G0357400 Rorug04G0357500 Rorug04G0357600
rosa_samantha	Rh3AG240300 Rh3BG276000 Rh3CG271300 Rh3DG267300 Rh5BG363100
rosa_wichuraiana	Rw2G038400 Rw2G038410 Rw2G038420 Rw2G038430 Rw2G038440 Rw2G038450 Rw3G021460 Rw6G011250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	185
Acc36I	ACCTGC	1 cut(s)	185
AccI	GTMKAC	1 cut(s)	943
AciI	CCGC	3 cut(s)	32, 319, 760
AclI	AACGTT	1 cut(s)	230
AclWI	GGATC	2 cut(s)	140, 199
AcoI	YGGCCR	2 cut(s)	104, 902
AcuI	CTGAAG	2 cut(s)	983, 1119
AfaI	GTAC	3 cut(s)	215, 585, 610
AfiI	CCNNNNNNNGG	3 cut(s)	383, 573, 1096
AgsI	TTSAA	3 cut(s)	467, 475, 1086
AjnI	CCWGG	1 cut(s)	309
AluBI	AGCT	4 cut(s)	20, 347, 429, 541
AluI	AGCT	4 cut(s)	20, 347, 429, 541
Alw21I	GWGCWC	1 cut(s)	753
Alw26I	GTCTC	4 cut(s)	58, 628, 918, 1107
Alw44I	GTGCAC	1 cut(s)	749
AlwI	GGATC	2 cut(s)	140, 199
AlwNI	CAGNNNCTG	2 cut(s)	20, 224
AoxI	GGCC	5 cut(s)	58, 104, 432, 534, 902
ApaLI	GTGCAC	1 cut(s)	749
ApeKI	GCWGC	6 cut(s)	11, 14, 17, 548, 563, 577
ArsI	GACNNNNNNTTYG	2 cut(s)	883, 915
AspLEI	GCGC	2 cut(s)	341, 645
AspS9I	GGNCC	2 cut(s)	307, 432
AsuC2I	CCSGG	1 cut(s)	1097
AsuHPI	GGTGA	2 cut(s)	687, 693
AvaII	GGWCC	1 cut(s)	307
AxyI	CCTNAGG	1 cut(s)	687
BaeGI	GKGCMC	1 cut(s)	753
BanII	GRGCYC	1 cut(s)	961
BauI	CACGAG	1 cut(s)	994
BbsI	GAAGAC	3 cut(s)	455, 972, 1125
Bbv12I	GWGCWC	1 cut(s)	753
BbvCI	CCTCAGC	1 cut(s)	486
BbvI	GCAGC	6 cut(s)	23, 26, 29, 560, 564, 575
BccI	CCATC	1 cut(s)	297
BciT130I	CCWGG	1 cut(s)	311
BcnI	CCSGG	1 cut(s)	1097
BcoDI	GTCTC	4 cut(s)	58, 628, 918, 1107
BfaI	CTAG	1 cut(s)	588
BfoI	RGCGCY	1 cut(s)	342
BfuAI	ACCTGC	1 cut(s)	185
BisI	GCNGC	7 cut(s)	12, 15, 18, 549, 564, 578, 761
BlpI	GCTNAGC	1 cut(s)	315
BlsI	GCNGC	7 cut(s)	13, 16, 19, 550, 565, 579, 762
Bme1390I	CCNGG	2 cut(s)	311, 1097
Bme18I	GGWCC	1 cut(s)	307
BmgT120I	GGNCC	2 cut(s)	307, 432
BmiI	GGNNCC	1 cut(s)	308
BmrFI	CCNGG	2 cut(s)	311, 1097
BmrI	ACTGGG	1 cut(s)	799
BmsI	GCATC	2 cut(s)	784, 826
BmuI	ACTGGG	1 cut(s)	799
BpiI	GAAGAC	3 cut(s)	455, 972, 1125
Bpu10I	CCTNAGC	2 cut(s)	343, 486
Bpu1102I	GCTNAGC	1 cut(s)	315
BpuMI	CCSGG	1 cut(s)	1097
BsaJI	CCNNGG	2 cut(s)	331, 1095
BsaWI	WCCGGW	1 cut(s)	376
Bsc4I	CCNNNNNNNGG	3 cut(s)	383, 573, 1096
Bse1I	ACTGG	2 cut(s)	805, 901
Bse21I	CCTNAGG	1 cut(s)	687
BseBI	CCWGG	1 cut(s)	311
BseDI	CCNNGG	2 cut(s)	331, 1095
BseGI	GGATG	2 cut(s)	308, 841
BseLI	CCNNNNNNNGG	3 cut(s)	383, 573, 1096
BseMII	CTCAG	4 cut(s)	69, 329, 500, 1085
BseNI	ACTGG	2 cut(s)	805, 901
BseSI	GKGCMC	1 cut(s)	753
BseXI	GCAGC	6 cut(s)	23, 26, 29, 560, 564, 575
BseYI	CCCAGC	2 cut(s)	34, 429
BshFI	GGCC	5 cut(s)	60, 106, 434, 536, 904
BsiHKAI	GWGCWC	1 cut(s)	753
BsiSI	CCGG	2 cut(s)	377, 1097
BslFI	GGGAC	1 cut(s)	14
BslI	CCNNNNNNNGG	3 cut(s)	383, 573, 1096
BsmAI	GTCTC	4 cut(s)	58, 628, 918, 1107
BsmBI	CGTCTC	1 cut(s)	58
BsmFI	GGGAC	1 cut(s)	14
BsnI	GGCC	5 cut(s)	60, 106, 434, 536, 904
Bsp1286I	GDGCHC	2 cut(s)	753, 961
Bsp1407I	TGTACA	1 cut(s)	213
Bsp143I	GATC	3 cut(s)	132, 204, 877
Bsp1720I	GCTNAGC	1 cut(s)	315
BspACI	CCGC	3 cut(s)	32, 319, 760
BspANI	GGCC	5 cut(s)	60, 106, 434, 536, 904
BspCNI	CTCAG	4 cut(s)	68, 328, 499, 1084
BspLI	GGNNCC	1 cut(s)	308
BspMI	ACCTGC	1 cut(s)	185
BspPI	GGATC	2 cut(s)	140, 199
BspQI	GCTCTTC	1 cut(s)	50
BsrGI	TGTACA	1 cut(s)	213
BsrI	ACTGG	2 cut(s)	805, 901
BssECI	CCNNGG	2 cut(s)	331, 1095
BssMI	GATC	3 cut(s)	132, 204, 877
BssSI	CACGAG	1 cut(s)	994
BssT1I	CCWWGG	1 cut(s)	331
Bst2BI	CACGAG	1 cut(s)	994
Bst2UI	CCWGG	1 cut(s)	311
Bst4CI	ACNGT	4 cut(s)	111, 471, 676, 1042
Bst6I	CTCTTC	1 cut(s)	50
BstAPI	GCANNNNNTGC	1 cut(s)	836
BstAUI	TGTACA	1 cut(s)	213
BstDEI	CTNAG	9 cut(s)	55, 114, 315, 343, 486, 612, 687, 713, 1071
BstF5I	GGATG	2 cut(s)	308, 841
BstH2I	RGCGCY	1 cut(s)	342
BstHHI	GCGC	2 cut(s)	341, 645
BstKTI	GATC	3 cut(s)	135, 207, 880
BstMAI	GTCTC	4 cut(s)	58, 628, 918, 1107
BstMBI	GATC	3 cut(s)	132, 204, 877
BstMWI	GCNNNNNNNGC	6 cut(s)	11, 17, 40, 336, 757, 836
BstNI	CCWGG	1 cut(s)	311
BstNSI	RCATGY	2 cut(s)	257, 749
BstSCI	CCNGG	2 cut(s)	309, 1095
BstSLI	GKGCMC	1 cut(s)	753
BstV1I	GCAGC	6 cut(s)	23, 26, 29, 560, 564, 575
BstV2I	GAAGAC	3 cut(s)	455, 972, 1125
BstX2I	RGATCY	1 cut(s)	204
BstYI	RGATCY	1 cut(s)	204
Bsu36I	CCTNAGG	1 cut(s)	687
BsuRI	GGCC	5 cut(s)	60, 106, 434, 536, 904
BtsCI	GGATG	2 cut(s)	308, 841
BtsIMutI	CAGTG	2 cut(s)	107, 812
BveI	ACCTGC	1 cut(s)	185
CaiI	CAGNNNCTG	2 cut(s)	20, 224
CfoI	GCGC	2 cut(s)	341, 645
Cfr13I	GGNCC	2 cut(s)	307, 432
CseI	GACGC	1 cut(s)	918
Csp6I	GTAC	3 cut(s)	214, 584, 609
CviAII	CATG	4 cut(s)	254, 265, 746, 939
CviQI	GTAC	3 cut(s)	214, 584, 609
DdeI	CTNAG	9 cut(s)	55, 114, 315, 343, 486, 612, 687, 713, 1071
DpnI	GATC	3 cut(s)	134, 206, 879
DpnII	GATC	3 cut(s)	132, 204, 877
DraI	TTTAAA	1 cut(s)	453
EaeI	YGGCCR	2 cut(s)	104, 902
Eam1104I	CTCTTC	1 cut(s)	50
EarI	CTCTTC	1 cut(s)	50
Eco130I	CCWWGG	1 cut(s)	331
Eco147I	AGGCCT	1 cut(s)	60
Eco24I	GRGCYC	1 cut(s)	961
Eco47I	GGWCC	1 cut(s)	307
Eco57I	CTGAAG	2 cut(s)	983, 1119
Eco81I	CCTNAGG	1 cut(s)	687
EcoO109I	RGGNCCY	1 cut(s)	307
EcoRII	CCWGG	1 cut(s)	309
EcoT14I	CCWWGG	1 cut(s)	331
EcoT22I	ATGCAT	1 cut(s)	841
EcoT38I	GRGCYC	1 cut(s)	961
ErhI	CCWWGG	1 cut(s)	331
Esp3I	CGTCTC	1 cut(s)	58
FaeI	CATG	4 cut(s)	257, 268, 749, 942
FaqI	GGGAC	1 cut(s)	14
FatI	CATG	4 cut(s)	253, 264, 745, 938
FauI	CCCGC	1 cut(s)	39
FblI	GTMKAC	1 cut(s)	943
Fnu4HI	GCNGC	7 cut(s)	12, 15, 18, 549, 564, 578, 761
FokI	GGATG	2 cut(s)	315, 848
FriOI	GRGCYC	1 cut(s)	961
Fsp4HI	GCNGC	7 cut(s)	12, 15, 18, 549, 564, 578, 761
FspBI	CTAG	1 cut(s)	588
GlaI	GCGC	2 cut(s)	340, 644
GluI	GCNGC	7 cut(s)	12, 15, 18, 549, 564, 578, 761
GsaI	CCCAGC	2 cut(s)	38, 433
HaeII	RGCGCY	1 cut(s)	342
HaeIII	GGCC	5 cut(s)	60, 106, 434, 536, 904
HapII	CCGG	2 cut(s)	377, 1097
HgaI	GACGC	1 cut(s)	918
HhaI	GCGC	2 cut(s)	341, 645
Hin1II	CATG	4 cut(s)	257, 268, 749, 942
Hin6I	GCGC	2 cut(s)	339, 643
HinP1I	GCGC	2 cut(s)	339, 643
HindIII	AAGCTT	1 cut(s)	539
HinfI	GANTC	4 cut(s)	601, 717, 1060, 1130
HpaII	CCGG	2 cut(s)	377, 1097
HphI	GGTGA	2 cut(s)	687, 693
Hpy166II	GTNNAC	4 cut(s)	214, 216, 751, 944
Hpy188I	TCNGA	3 cut(s)	406, 963, 1078
Hpy188III	TCNNGA	2 cut(s)	881, 1057
Hpy8I	GTNNAC	4 cut(s)	214, 216, 751, 944
HpyAV	CCTTC	7 cut(s)	123, 383, 469, 509, 708, 744, 994
HpyCH4III	ACNGT	4 cut(s)	111, 471, 676, 1042
HpyCH4IV	ACGT	1 cut(s)	230
HpyF10VI	GCNNNNNNNGC	6 cut(s)	11, 17, 40, 336, 757, 836
HpyF3I	CTNAG	9 cut(s)	55, 114, 315, 343, 486, 612, 687, 713, 1071
HpySE526I	ACGT	1 cut(s)	230
Hsp92II	CATG	4 cut(s)	257, 268, 749, 942
HspAI	GCGC	2 cut(s)	339, 643
Kzo9I	GATC	3 cut(s)	132, 204, 877
LguI	GCTCTTC	1 cut(s)	50
LmnI	GCTCC	1 cut(s)	336
Lsp1109I	GCAGC	6 cut(s)	23, 26, 29, 560, 564, 575
LweI	GCATC	2 cut(s)	784, 826
MaeI	CTAG	1 cut(s)	588
MaeII	ACGT	1 cut(s)	230
MaeIII	GTNAC	2 cut(s)	670, 1036
MalI	GATC	3 cut(s)	134, 206, 879
MboI	GATC	3 cut(s)	132, 204, 877
MboII	GAAGA	6 cut(s)	37, 40, 367, 455, 972, 1125
MflI	RGATCY	1 cut(s)	204
MhlI	GDGCHC	2 cut(s)	753, 961
MluCI	AATT	2 cut(s)	152, 884
MlyI	GAGTC	2 cut(s)	711, 1139
MmeI	TCCRAC	2 cut(s)	280, 825
MnlI	CCTC	8 cut(s)	71, 495, 577, 615, 718, 765, 980, 1003
Mph1103I	ATGCAT	1 cut(s)	841
MseI	TTAA	5 cut(s)	201, 239, 452, 756, 767
MslI	CAYNNNNRTG	1 cut(s)	279
MspA1I	CMGCKG	3 cut(s)	20, 34, 319
MspI	CCGG	2 cut(s)	377, 1097
MspR9I	CCNGG	2 cut(s)	311, 1097
MvaI	CCWGG	1 cut(s)	311
MwoI	GCNNNNNNNGC	6 cut(s)	11, 17, 40, 336, 757, 836
NciI	CCSGG	1 cut(s)	1097
NdeII	GATC	3 cut(s)	132, 204, 877
NlaIII	CATG	4 cut(s)	257, 268, 749, 942
NlaIV	GGNNCC	1 cut(s)	308
NsiI	ATGCAT	1 cut(s)	841
NspI	RCATGY	2 cut(s)	257, 749
PaqCI	CACCTGC	1 cut(s)	185
PceI	AGGCCT	1 cut(s)	60
PciSI	GCTCTTC	1 cut(s)	50
PfeI	GAWTC	2 cut(s)	601, 1060
PkrI	GCNGC	7 cut(s)	13, 16, 19, 550, 565, 579, 762
PleI	GAGTC	2 cut(s)	711, 1138
PpsI	GAGTC	2 cut(s)	711, 1138
PpuMI	RGGWCCY	1 cut(s)	307
Psp1406I	AACGTT	1 cut(s)	230
Psp5II	RGGWCCY	1 cut(s)	307
Psp6I	CCWGG	1 cut(s)	309
PspFI	CCCAGC	2 cut(s)	34, 429
PspGI	CCWGG	1 cut(s)	309
PspN4I	GGNNCC	1 cut(s)	308
PspPI	GGNCC	2 cut(s)	307, 432
PspPPI	RGGWCCY	1 cut(s)	307
PsrI	GAACNNNNNNTAC	2 cut(s)	511, 543
PstNI	CAGNNNCTG	2 cut(s)	20, 224
PsuI	RGATCY	1 cut(s)	204
PvuII	CAGCTG	1 cut(s)	20
RsaI	GTAC	3 cut(s)	215, 585, 610
RsaNI	GTAC	3 cut(s)	214, 584, 609
RseI	CAYNNNNRTG	1 cut(s)	279
SapI	GCTCTTC	1 cut(s)	50
SaqAI	TTAA	5 cut(s)	201, 239, 452, 756, 767
SatI	GCNGC	7 cut(s)	12, 15, 18, 549, 564, 578, 761
Sau3AI	GATC	3 cut(s)	132, 204, 877
Sau96I	GGNCC	2 cut(s)	307, 432
SchI	GAGTC	2 cut(s)	711, 1139
ScrFI	CCNGG	2 cut(s)	311, 1097
SduI	GDGCHC	2 cut(s)	753, 961
SfaNI	GCATC	2 cut(s)	784, 826
SinI	GGWCC	1 cut(s)	307
SmiMI	CAYNNNNRTG	1 cut(s)	279
Sse9I	AATT	2 cut(s)	152, 884
SseBI	AGGCCT	1 cut(s)	60
SsiI	CCGC	3 cut(s)	32, 319, 760
SspMI	CTAG	1 cut(s)	588
StuI	AGGCCT	1 cut(s)	60
StyD4I	CCNGG	2 cut(s)	309, 1095
StyI	CCWWGG	1 cut(s)	331
TaaI	ACNGT	4 cut(s)	111, 471, 676, 1042
TaiI	ACGT	1 cut(s)	233
TasI	AATT	2 cut(s)	152, 884
TatI	WGTACW	1 cut(s)	213
TauI	GCSGC	1 cut(s)	763
TfiI	GAWTC	2 cut(s)	601, 1060
Tru1I	TTAA	5 cut(s)	201, 239, 452, 756, 767
Tru9I	TTAA	5 cut(s)	201, 239, 452, 756, 767
TscAI	CASTG	2 cut(s)	114, 812
TseI	GCWGC	6 cut(s)	11, 14, 17, 548, 563, 577
TspDTI	ATGAA	3 cut(s)	82, 368, 456
TspRI	CASTG	2 cut(s)	114, 812
VneI	GTGCAC	1 cut(s)	749
VpaK11BI	GGWCC	1 cut(s)	307
XceI	RCATGY	2 cut(s)	257, 749
XmiI	GTMKAC	1 cut(s)	943
XspI	CTAG	1 cut(s)	588
Zsp2I	ATGCAT	1 cut(s)	841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.