RchiOBHm_Chr2g0149421

1-acyl-sn-glycerol-3-phosphate acyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0001488
Physical Location & Seq
Forward (+)
67280480 .. 67286130
5651 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51882

Sequence Viewer

Length: 1185 bp
ATGGTTTTGCCCATGGCGATTGCACTCGGAATCCTCTTTTCAGTGGTCGTGGTCCTCCATCCGCTAATCCTTCATCTCATCCCGGTGGTGCTGCTCTGCGTCTCAGGACTCTTTGCCAATCTGGTTCAGGCGTTTTGCTTTGTTTGTATCTGGCCGATTTCGAAGAACGCATACGCAAGGATAAACGGCGTGGTTAAAGAATTGGATTGGCGGGTTCTGCTAGGCCTCATTGATTGGTGTGCTGGCGTTAAGATCCTAGAGTGCGTAGAGCTCGAAACCAGCCAGTTAAAGGGTGAAGAACATGAACTTGTCATATCCAATGCTAGAAATGGTGCCGATCCTCTTCTTGAACTGGTTCTCGCTCAGTGGTCAGGTTGCCTTGGCAGTTTATTAGCTGTAATAAAGACATCAGCAAGATACATACCGGTCATAGGTTGGTCAATGTGGTTTTCTGGATATGTTTTTTCAGGAAGAAGTTGTGACCAAGATGCCAGAAAACTTAAGTCAGATCTAAAAGACTTCCCTCAACCCTTTTGGTTATCTGTTGTGCTAGAAAGAACTGGTTTTACTCAGGGAGAGCTTCTAGCTGCACAGAGGCTTCCTGTCCCTAGCAAGGTTTTGAGTCCTGATACTAAGGATTTGGTCTATGCAGTAAGACGTGCGTACTCTGTTGTTTCAGCCATTTATGTCATAACAGTGGCCATTCCTGAAACTTCACCTCCACCTACACTTGAAAGTGTAATTAAAGGGGGACCTTCTGTGGTGCATGTGTACATCAAGCAGCATGCGACTAAAAAATGTTCTGAAACTGATGATGCTGTTAAAAAGTGGTGCACAGAAATACTTGCAGCCAAGATAGCAGAACAAACTTTTGGCAATAAAGGATTGCAAGCTATTGGTCGGTCACTTAAGTGTTTCTTGGTTGTTATCTCTCTAATCGTGTTAGGGTCTCTAAAGTTCAACTTCGTCTGCTGTTCCACACTGCTTGTATTGAGTGCTGCCCTGTTTACTGGCCGGGTGCTTACTCTGTTCGGCTGTGGAGTGCTTTCGCTGTTGCAGTGTTTCATGGAGGCCGCTATAGCAAATATTAGTTGGTCAGAGCACCTCAAGCCCATCTGTGGCTGGTTGATTGATATTCTTGGAGAATTGCTTTCGACGCTTCCCTGTGACAGACCTTGGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko00564 ko01100 ko01110 ko04072 map00561 map00564 map01100 map01110 map04072
Pfam Domains
Protein Families
Acyltransf_C Acyltransferase

Protein Analysis

394

Amino Acids

43.15

Weight (kDa)

8.1

Isoelectric Point (pI)

32.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 332
AciI CCGC 3 cut(s) 62, 211, 1074
AclWI GGATC 2 cut(s) 247, 332
AcoI YGGCCR 3 cut(s) 152, 699, 1012
AfaI GTAC 2 cut(s) 665, 773
AfiI CCNNNNNNNGG 4 cut(s) 289, 431, 613, 1118
AflII CTTAAG 2 cut(s) 500, 908
AgeI ACCGGT 1 cut(s) 424
AgsI TTSAA 3 cut(s) 350, 734, 961
AjiI CACGTC 1 cut(s) 659
AjuI GAANNNNNNNTTGG 2 cut(s) 855, 887
AleI CACNNNNGTG 1 cut(s) 910
AluBI AGCT 5 cut(s) 271, 395, 580, 587, 893
AluI AGCT 5 cut(s) 271, 395, 580, 587, 893
Alw21I GWGCWC 3 cut(s) 273, 836, 1104
Alw26I GTCTC 2 cut(s) 106, 954
Alw44I GTGCAC 1 cut(s) 832
AlwI GGATC 2 cut(s) 247, 332
AoxI GGCC 5 cut(s) 152, 223, 699, 1012, 1071
ApaLI GTGCAC 1 cut(s) 832
ApeKI GCWGC 5 cut(s) 91, 587, 781, 848, 998
AsiGI ACCGGT 1 cut(s) 424
Asp700I GAANNNNTTC 1 cut(s) 354
AspS9I GGNCC 2 cut(s) 52, 752
AsuC2I CCSGG 2 cut(s) 83, 1016
AsuHPI GGTGA 2 cut(s) 305, 708
AsuII TTCGAA 1 cut(s) 161
AvaII GGWCC 2 cut(s) 52, 752
BaeGI GKGCMC 1 cut(s) 836
BalI TGGCCA 1 cut(s) 701
BanI GGYRCC 1 cut(s) 332
BanII GRGCYC 1 cut(s) 273
BarI GAAGNNNNNNTAC 2 cut(s) 155, 187
Bbv12I GWGCWC 3 cut(s) 273, 836, 1104
BbvI GCAGC 5 cut(s) 78, 574, 793, 860, 985
BccI CCATC 2 cut(s) 66, 1121
BceAI ACGGC 1 cut(s) 202
BcnI CCSGG 2 cut(s) 83, 1016
BcoDI GTCTC 2 cut(s) 106, 954
BfaI CTAG 6 cut(s) 221, 257, 324, 551, 584, 609
BfmI CTRYAG 1 cut(s) 1077
BfrI CTTAAG 2 cut(s) 500, 908
BglII AGATCT 1 cut(s) 508
BisI GCNGC 6 cut(s) 92, 588, 782, 849, 999, 1074
BlsI GCNGC 6 cut(s) 93, 589, 783, 850, 1000, 1075
Bme1390I CCNGG 2 cut(s) 83, 1016
Bme18I GGWCC 2 cut(s) 52, 752
BmgBI CACGTC 1 cut(s) 659
BmgT120I GGNCC 2 cut(s) 52, 752
BmiI GGNNCC 2 cut(s) 334, 753
BmrFI CCNGG 2 cut(s) 83, 1016
BmsI GCATC 2 cut(s) 478, 805
Bpu14I TTCGAA 1 cut(s) 161
BpuEI CTTGAG 1 cut(s) 1091
BpuMI CCSGG 2 cut(s) 83, 1016
BsaI GGTCTC 1 cut(s) 954
BsaJI CCNNGG 3 cut(s) 12, 379, 1175
BsaWI WCCGGW 1 cut(s) 424
BsaXI ACNNNNNCTCC 2 cut(s) 703, 733
Bsc4I CCNNNNNNNGG 4 cut(s) 289, 431, 613, 1118
Bse118I RCCGGY 1 cut(s) 424
Bse1I ACTGG 4 cut(s) 283, 357, 565, 1015
BseDI CCNNGG 3 cut(s) 12, 379, 1175
BseGI GGATG 2 cut(s) 58, 78
BseLI CCNNNNNNNGG 4 cut(s) 289, 431, 613, 1118
BseMII CTCAG 3 cut(s) 117, 377, 584
BseNI ACTGG 4 cut(s) 283, 357, 565, 1015
BseSI GKGCMC 1 cut(s) 836
BseXI GCAGC 5 cut(s) 78, 574, 793, 860, 985
BsgI GTGCAG 1 cut(s) 573
BshFI GGCC 5 cut(s) 154, 225, 701, 1014, 1073
BshNI GGYRCC 1 cut(s) 332
BshTI ACCGGT 1 cut(s) 424
BsiHKAI GWGCWC 3 cut(s) 273, 836, 1104
BsiSI CCGG 3 cut(s) 83, 425, 1015
BslFI GGGAC 2 cut(s) 590, 765
BslI CCNNNNNNNGG 4 cut(s) 289, 431, 613, 1118
BsmAI GTCTC 2 cut(s) 106, 954
BsmBI CGTCTC 1 cut(s) 106
BsmFI GGGAC 2 cut(s) 590, 765
BsnI GGCC 5 cut(s) 154, 225, 701, 1014, 1073
Bso31I GGTCTC 1 cut(s) 954
Bsp119I TTCGAA 1 cut(s) 161
Bsp1286I GDGCHC 3 cut(s) 273, 836, 1104
Bsp1407I TGTACA 1 cut(s) 771
Bsp143I GATC 3 cut(s) 252, 337, 508
Bsp19I CCATGG 1 cut(s) 12
BspACI CCGC 3 cut(s) 62, 211, 1074
BspANI GGCC 5 cut(s) 154, 225, 701, 1014, 1073
BspCNI CTCAG 3 cut(s) 116, 376, 583
BspLI GGNNCC 2 cut(s) 334, 753
BspPI GGATC 2 cut(s) 247, 332
BspT104I TTCGAA 1 cut(s) 161
BspT107I GGYRCC 1 cut(s) 332
BspTI CTTAAG 2 cut(s) 500, 908
BspTNI GGTCTC 1 cut(s) 954
BsrFI RCCGGY 1 cut(s) 424
BsrGI TGTACA 1 cut(s) 771
BsrI ACTGG 4 cut(s) 283, 357, 565, 1015
BssAI RCCGGY 1 cut(s) 424
BssECI CCNNGG 3 cut(s) 12, 379, 1175
BssMI GATC 3 cut(s) 252, 337, 508
BssT1I CCWWGG 3 cut(s) 12, 379, 1175
Bst4CI ACNGT 1 cut(s) 697
Bst6I CTCTTC 1 cut(s) 348
BstAFI CTTAAG 2 cut(s) 500, 908
BstAUI TGTACA 1 cut(s) 771
BstBI TTCGAA 1 cut(s) 161
BstC8I GCNNGC 3 cut(s) 244, 786, 891
BstDEI CTNAG 4 cut(s) 103, 363, 570, 633
BstDSI CCRYGG 1 cut(s) 12
BstF5I GGATG 2 cut(s) 58, 78
BstKTI GATC 3 cut(s) 255, 340, 511
BstMAI GTCTC 2 cut(s) 106, 954
BstMBI GATC 3 cut(s) 252, 337, 508
BstMWI GCNNNNNNNGC 5 cut(s) 217, 857, 1079, 1108, 1156
BstNSI RCATGY 2 cut(s) 770, 788
BstSCI CCNGG 2 cut(s) 81, 1014
BstSFI CTRYAG 1 cut(s) 1077
BstSLI GKGCMC 1 cut(s) 836
BstV1I GCAGC 5 cut(s) 78, 574, 793, 860, 985
BstX2I RGATCY 2 cut(s) 252, 508
BstYI RGATCY 2 cut(s) 252, 508
BsuRI GGCC 5 cut(s) 154, 225, 701, 1014, 1073
BtgI CCRYGG 1 cut(s) 12
BtrI CACGTC 1 cut(s) 659
BtsCI GGATG 2 cut(s) 58, 78
BtsI GCAGTG 2 cut(s) 980, 1064
BtsIMutI CAGTG 5 cut(s) 48, 371, 702, 980, 1064
Cac8I GCNNGC 3 cut(s) 244, 786, 891
Cfr10I RCCGGY 1 cut(s) 424
Cfr13I GGNCC 2 cut(s) 52, 752
CseI GACGC 2 cut(s) 88, 1165
Csp6I GTAC 2 cut(s) 664, 772
CspAI ACCGGT 1 cut(s) 424
CspCI CAANNNNNGTGG 2 cut(s) 967, 1002
CviAII CATG 5 cut(s) 13, 302, 767, 785, 1066
CviQI GTAC 2 cut(s) 664, 772
DdeI CTNAG 4 cut(s) 103, 363, 570, 633
DpnI GATC 3 cut(s) 254, 339, 510
DpnII GATC 3 cut(s) 252, 337, 508
EaeI YGGCCR 3 cut(s) 152, 699, 1012
Eam1104I CTCTTC 1 cut(s) 348
EarI CTCTTC 1 cut(s) 348
Ecl136II GAGCTC 1 cut(s) 271
Eco130I CCWWGG 3 cut(s) 12, 379, 1175
Eco147I AGGCCT 1 cut(s) 225
Eco24I GRGCYC 1 cut(s) 273
Eco31I GGTCTC 1 cut(s) 954
Eco47I GGWCC 2 cut(s) 52, 752
Eco53kI GAGCTC 1 cut(s) 271
EcoICRI GAGCTC 1 cut(s) 271
EcoO109I RGGNCCY 1 cut(s) 752
EcoT14I CCWWGG 3 cut(s) 12, 379, 1175
EcoT38I GRGCYC 1 cut(s) 273
ErhI CCWWGG 3 cut(s) 12, 379, 1175
Esp3I CGTCTC 1 cut(s) 106
FaeI CATG 5 cut(s) 16, 305, 770, 788, 1069
FalI AAGNNNNNCTT 4 cut(s) 902, 934, 947, 979
FaqI GGGAC 2 cut(s) 590, 765
FatI CATG 5 cut(s) 12, 301, 766, 784, 1065
FauI CCCGC 1 cut(s) 204
Fnu4HI GCNGC 6 cut(s) 92, 588, 782, 849, 999, 1074
FokI GGATG 2 cut(s) 45, 65
FriOI GRGCYC 1 cut(s) 273
Fsp4HI GCNGC 6 cut(s) 92, 588, 782, 849, 999, 1074
FspBI CTAG 6 cut(s) 221, 257, 324, 551, 584, 609
GluI GCNGC 6 cut(s) 92, 588, 782, 849, 999, 1074
HaeIII GGCC 5 cut(s) 154, 225, 701, 1014, 1073
HapII CCGG 3 cut(s) 83, 425, 1015
HgaI GACGC 2 cut(s) 88, 1165
Hin1II CATG 5 cut(s) 16, 305, 770, 788, 1069
HinfI GANTC 3 cut(s) 30, 108, 622
HpaII CCGG 3 cut(s) 83, 425, 1015
HphI GGTGA 2 cut(s) 305, 708
Hpy166II GTNNAC 3 cut(s) 772, 834, 1008
Hpy188I TCNGA 4 cut(s) 29, 508, 805, 1099
Hpy188III TCNNGA 6 cut(s) 105, 347, 453, 468, 626, 707
Hpy8I GTNNAC 3 cut(s) 772, 834, 1008
Hpy99I CGWCG 1 cut(s) 1159
HpyAV CCTTC 2 cut(s) 80, 765
HpyCH4III ACNGT 1 cut(s) 697
HpyCH4IV ACGT 1 cut(s) 658
HpyCH4V TGCA 8 cut(s) 23, 590, 650, 766, 834, 848, 889, 1057
HpyF10VI GCNNNNNNNGC 5 cut(s) 217, 857, 1079, 1108, 1156
HpyF3I CTNAG 4 cut(s) 103, 363, 570, 633
HpySE526I ACGT 1 cut(s) 658
Hsp92II CATG 5 cut(s) 16, 305, 770, 788, 1069
Kzo9I GATC 3 cut(s) 252, 337, 508
Lsp1109I GCAGC 5 cut(s) 78, 574, 793, 860, 985
LweI GCATC 2 cut(s) 478, 805
MaeI CTAG 6 cut(s) 221, 257, 324, 551, 584, 609
MaeII ACGT 1 cut(s) 658
MaeIII GTNAC 3 cut(s) 479, 903, 1166
MalI GATC 3 cut(s) 254, 339, 510
MboI GATC 3 cut(s) 252, 337, 508
MboII GAAGA 4 cut(s) 175, 308, 335, 483
MflI RGATCY 2 cut(s) 252, 508
MhlI GDGCHC 3 cut(s) 273, 836, 1104
MlsI TGGCCA 1 cut(s) 701
MluCI AATT 3 cut(s) 200, 741, 1145
MluNI TGGCCA 1 cut(s) 701
MlyI GAGTC 2 cut(s) 102, 631
MnlI CCTC 9 cut(s) 44, 65, 236, 351, 534, 588, 729, 1063, 1115
Mox20I TGGCCA 1 cut(s) 701
MroXI GAANNNNTTC 1 cut(s) 354
MscI TGGCCA 1 cut(s) 701
MseI TTAA 7 cut(s) 195, 249, 287, 501, 744, 822, 909
MslI CAYNNNNRTG 3 cut(s) 83, 695, 910
Msp20I TGGCCA 1 cut(s) 701
MspCI CTTAAG 2 cut(s) 500, 908
MspI CCGG 3 cut(s) 83, 425, 1015
MspR9I CCNGG 2 cut(s) 83, 1016
MwoI GCNNNNNNNGC 5 cut(s) 217, 857, 1079, 1108, 1156
NciI CCSGG 2 cut(s) 83, 1016
NcoI CCATGG 1 cut(s) 12
NdeII GATC 3 cut(s) 252, 337, 508
NlaIII CATG 5 cut(s) 16, 305, 770, 788, 1069
NlaIV GGNNCC 2 cut(s) 334, 753
NmuCI GTSAC 3 cut(s) 479, 903, 1166
NspI RCATGY 2 cut(s) 770, 788
NspV TTCGAA 1 cut(s) 161
OliI CACNNNNGTG 1 cut(s) 910
PaeI GCATGC 1 cut(s) 788
PceI AGGCCT 1 cut(s) 225
PdmI GAANNNNTTC 1 cut(s) 354
PfeI GAWTC 1 cut(s) 30
PinAI ACCGGT 1 cut(s) 424
PkrI GCNGC 6 cut(s) 93, 589, 783, 850, 1000, 1075
PleI GAGTC 2 cut(s) 102, 630
PpsI GAGTC 2 cut(s) 102, 630
PpuMI RGGWCCY 1 cut(s) 752
Psp124BI GAGCTC 1 cut(s) 273
Psp5II RGGWCCY 1 cut(s) 752
PspN4I GGNNCC 2 cut(s) 334, 753
PspPI GGNCC 2 cut(s) 52, 752
PspPPI RGGWCCY 1 cut(s) 752
PsrI GAACNNNNNNTAC 2 cut(s) 550, 582
PsuI RGATCY 2 cut(s) 252, 508
RsaI GTAC 2 cut(s) 665, 773
RsaNI GTAC 2 cut(s) 664, 772
RseI CAYNNNNRTG 3 cut(s) 83, 695, 910
SacI GAGCTC 1 cut(s) 273
SaqAI TTAA 7 cut(s) 195, 249, 287, 501, 744, 822, 909
SatI GCNGC 6 cut(s) 92, 588, 782, 849, 999, 1074
Sau3AI GATC 3 cut(s) 252, 337, 508
Sau96I GGNCC 2 cut(s) 52, 752
SchI GAGTC 2 cut(s) 102, 631
ScrFI CCNGG 2 cut(s) 83, 1016
SduI GDGCHC 3 cut(s) 273, 836, 1104
SfaNI GCATC 2 cut(s) 478, 805
SfcI CTRYAG 1 cut(s) 1077
SfuI TTCGAA 1 cut(s) 161
SinI GGWCC 2 cut(s) 52, 752
SmiMI CAYNNNNRTG 3 cut(s) 83, 695, 910
SmlI CTYRAG 3 cut(s) 500, 908, 1106
SmoI CTYRAG 3 cut(s) 500, 908, 1106
SphI GCATGC 1 cut(s) 788
Sse9I AATT 3 cut(s) 200, 741, 1145
SseBI AGGCCT 1 cut(s) 225
SsiI CCGC 3 cut(s) 62, 211, 1074
SspI AATATT 1 cut(s) 1087
SspMI CTAG 6 cut(s) 221, 257, 324, 551, 584, 609
SstI GAGCTC 1 cut(s) 273
StuI AGGCCT 1 cut(s) 225
StyD4I CCNGG 2 cut(s) 81, 1014
StyI CCWWGG 3 cut(s) 12, 379, 1175
TaaI ACNGT 1 cut(s) 697
TaiI ACGT 1 cut(s) 661
TaqI TCGA 3 cut(s) 161, 273, 1154
TaqII GACCGA 1 cut(s) 891
TasI AATT 3 cut(s) 200, 741, 1145
TatI WGTACW 1 cut(s) 771
TauI GCSGC 1 cut(s) 1076
TfiI GAWTC 1 cut(s) 30
Tru1I TTAA 7 cut(s) 195, 249, 287, 501, 744, 822, 909
Tru9I TTAA 7 cut(s) 195, 249, 287, 501, 744, 822, 909
TscAI CASTG 5 cut(s) 48, 371, 702, 987, 1064
TseFI GTSAC 3 cut(s) 479, 903, 1166
TseI GCWGC 5 cut(s) 91, 587, 781, 848, 998
Tsp45I GTSAC 3 cut(s) 479, 903, 1166
TspDTI ATGAA 3 cut(s) 62, 318, 1054
TspRI CASTG 5 cut(s) 48, 371, 702, 987, 1064
Vha464I CTTAAG 2 cut(s) 500, 908
VneI GTGCAC 1 cut(s) 832
VpaK11BI GGWCC 2 cut(s) 52, 752
XceI RCATGY 2 cut(s) 770, 788
XmnI GAANNNNTTC 1 cut(s) 354
XspI CTAG 6 cut(s) 221, 257, 324, 551, 584, 609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.