Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001158

Physical Location & Seq

Genomic Coordinates Reverse (-)

33310739 .. 33312989

Gene Structure 2251 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G362000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1194 bp

ATGAGAGAGATTGCAATTGGAATTGAAAGAGGCGTATTCAGTGATGACGACAATATTATTAATGACGACGTTGTTTGTTTCTTCTATTACGAAGCGGCAGGTGGAGGTGGAGGAGGTGGTGGTTTAGATGTTAAGCTGCTAGCAGCTGCCAATGTTACAATTCCAGCTGTGTTTATGTTTGGAGATTCGATCGTTGATACAGGCAACAATAACGACAATCTCAAAACACCAGCTCGCTGCAATTTCCCTCCATATGGCAGGGATTTCCAGGGAGGCATACCCACTGGCAGATATTCCAATGGAAAGGTTCCCTCTGACTTCATAGCGGAGGAATTGGGTATTAAGGAGCTCTTGCCAGCCTATTTGGATCCAAACCTAGCGCAGAATGATCTGCTTACGGGTGTCAGCTTCGCTGTGGGTGCCACAGGATATGACCCTATGACAGCAAAAGTTGTGGCAGTTACACAACTATCCGATCAATTGCTGCAATTTGAAGAATACATAGGAAGGCTGAAAGGAATAGTGGGAGAAGATAGAGCAAACTCCATCTTGGCTAACAGTCTCTTTTTCGTGGTGGCAAGCAGCAACGATCTTGCCAATACCTACTTTGTTACTGGCATTAGGAAATTGGAGTATGATGTGCCTTCTTACACCGACCTCATGCTCAATCACGCTTCTGATTTCCTTAAGGTCACTTTAAAACATATTAAATCCGATCGATGTCAAAACCATATAATACGAATCTCTGTCAAAGCTTGTAATTTTGATTTGTTTGATTTCTTGCGTTGTGAAAAGGGGTTGTATGCATTGGGGGCACGGAGAATTGGTGTTTTCAGCGCACCCCCTATTGGATGTTTGCCATCCCAGAGGACTTTGGGAGGAGGCATACTAAGAGATTGTGTAGAGAAACCCAACCAAGCAGCCATGTTGTTCAACTCCAAACTCTCGGCAGAGCTGGATAACCTCAACAAAAACCTACCCAACTCAAACCTGGTATATGTTGACATCTACAACCCTCTGCTCGATCTCATCATCAACCCTACTAATTACGGCTTTGAAATTGCGGATAAAGGGTGTTGCGGGAGTGGGAAGCTGGAGGTGTCTATACTTTGCAATGAATTCGAGCCTGAGACTTGTACTGATGACTCTAATTATGTGTTTTGGGACAGTTACCATCCCACTGAAGCCGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

398

Amino Acids

43.29

Weight (kDa)

4.63

Isoelectric Point (pI)

26.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58520 AT1G58525 AT1G58725 AT1G59030 AT1G59406 AT1G75880 AT1G75880 AT1G75890 AT1G75890 AT1G75890 AT1G75900 AT3G14820 AT3G43550 AT3G43570 AT5G42170
fragaria_vesca	FvH4_2g38112 FvH4_2g38120
malus_domestica	MD08G1009700.v1.1 MD08G1009800.v1.1 MD15G1008800.v1.1 MD15G1008900.v1.1 MD15G1009000.v1.1 MD15G1009100.v1.1 MD15G1009500.v1.1 MD15G1009600.v1.1
prunus_persica	Prupe.1G361800_v2.0.a1 Prupe.1G361800_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G362000_v2.0.a1 Prupe.1G362100_v2.0.a1
pyrus_communis	pycom08g00820 pycom08g00830 pycom15g00730 pycom15g00740 pycom15g00750 pycom15g00760 pycom15g00770
rosa_chinensis	RchiOBHm_Chr6g0303381 RchiOBHm_Chr6g0303411
rosa_laevigata	RLG00000011087 RLG00000011088
rosa_multiflora	Rmu_sc0002586.1_g000041 Rmu_ssc0000114.1_g000055 Rmu_ssc0000114.1_g000059
rosa_roxburghii	Rroxscaffold_7G00164790 Rroxscaffold_7G00164830
rosa_rugosa	Rorug06G0321000
rosa_samantha	Rh6AG435300 Rh6AG435400 Rh6CG447300 Rh6CG447500 Rh6DG434100 Rh6DG434200
rosa_wichuraiana	Rw6G037690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	89
Acc36I	ACCTGC	1 cut(s)	89
AccB1I	GGYRCC	1 cut(s)	419
AciI	CCGC	5 cut(s)	95, 326, 1064, 1080, 1188
AclWI	GGATC	2 cut(s)	362, 375
AcsI	RAATTY	1 cut(s)	1118
AfaI	GTAC	1 cut(s)	1138
AfiI	CCNNNNNNNGG	2 cut(s)	254, 848
AflII	CTTAAG	1 cut(s)	686
AgsI	TTSAA	4 cut(s)	26, 494, 934, 1058
AjnI	CCWGG	2 cut(s)	267, 990
AluBI	AGCT	9 cut(s)	136, 146, 167, 233, 349, 408, 755, 955, 1093
AluI	AGCT	9 cut(s)	136, 146, 167, 233, 349, 408, 755, 955, 1093
Alw21I	GWGCWC	1 cut(s)	351
Alw26I	GTCTC	2 cut(s)	566, 1124
AlwI	GGATC	2 cut(s)	362, 375
ApeKI	GCWGC	7 cut(s)	136, 143, 146, 237, 484, 582, 920
ApoI	RAATTY	1 cut(s)	1118
AseI	ATTAAT	1 cut(s)	60
AspLEI	GCGC	2 cut(s)	382, 839
AsuNHI	GCTAGC	1 cut(s)	139
BaeGI	GKGCMC	1 cut(s)	817
BamHI	GGATCC	1 cut(s)	367
BanI	GGYRCC	1 cut(s)	419
BanII	GRGCYC	1 cut(s)	351
Bbv12I	GWGCWC	1 cut(s)	351
BbvI	GCAGC	7 cut(s)	123, 133, 155, 224, 471, 594, 932
BccI	CCATC	3 cut(s)	554, 868, 1182
BceAI	ACGGC	1 cut(s)	1066
BcgI	CGANNNNNNTGC	2 cut(s)	1102, 1136
BciT130I	CCWGG	2 cut(s)	269, 992
BcoDI	GTCTC	2 cut(s)	566, 1124
BfaI	CTAG	2 cut(s)	140, 377
BfrI	CTTAAG	1 cut(s)	686
BfuAI	ACCTGC	1 cut(s)	89
BisI	GCNGC	9 cut(s)	96, 137, 144, 147, 238, 485, 583, 921, 1188
BlsI	GCNGC	9 cut(s)	97, 138, 145, 148, 239, 486, 584, 922, 1189
Bme1390I	CCNGG	2 cut(s)	269, 992
BmiI	GGNNCC	3 cut(s)	309, 369, 421
BmrFI	CCNGG	2 cut(s)	269, 992
BmtI	GCTAGC	1 cut(s)	143
BpmI	CTGGAG	1 cut(s)	1115
Bsa29I	ATCGAT	1 cut(s)	718
BsaJI	CCNNGG	1 cut(s)	268
BsaXI	ACNNNNNCTCC	2 cut(s)	811, 841
Bsc4I	CCNNNNNNNGG	2 cut(s)	254, 848
Bse1I	ACTGG	2 cut(s)	289, 619
Bse3DI	GCAATG	1 cut(s)	1120
BseBI	CCWGG	2 cut(s)	269, 992
BseCI	ATCGAT	1 cut(s)	718
BseDI	CCNNGG	1 cut(s)	268
BseGI	GGATG	3 cut(s)	857, 860, 1174
BseLI	CCNNNNNNNGG	2 cut(s)	254, 848
BseMI	GCAATG	1 cut(s)	1120
BseMII	CTCAG	1 cut(s)	1119
BseNI	ACTGG	2 cut(s)	289, 619
BseRI	GAGGAG	2 cut(s)	126, 894
BseSI	GKGCMC	1 cut(s)	817
BseXI	GCAGC	7 cut(s)	123, 133, 155, 224, 471, 594, 932
Bsh1285I	CGRYCG	2 cut(s)	192, 718
BshNI	GGYRCC	1 cut(s)	419
BshVI	ATCGAT	1 cut(s)	718
BsiEI	CGRYCG	2 cut(s)	192, 718
BsiHKAI	GWGCWC	1 cut(s)	351
BslFI	GGGAC	1 cut(s)	1178
BslI	CCNNNNNNNGG	2 cut(s)	254, 848
BsmAI	GTCTC	2 cut(s)	566, 1124
BsmFI	GGGAC	1 cut(s)	1178
Bsp1286I	GDGCHC	2 cut(s)	351, 817
Bsp143I	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
BspACI	CCGC	5 cut(s)	95, 326, 1064, 1080, 1188
BspCNI	CTCAG	1 cut(s)	1120
BspDI	ATCGAT	1 cut(s)	718
BspLI	GGNNCC	3 cut(s)	309, 369, 421
BspMI	ACCTGC	1 cut(s)	89
BspOI	GCTAGC	1 cut(s)	143
BspPI	GGATC	2 cut(s)	362, 375
BspT107I	GGYRCC	1 cut(s)	419
BspTI	CTTAAG	1 cut(s)	686
BsrDI	GCAATG	1 cut(s)	1120
BsrI	ACTGG	2 cut(s)	289, 619
BssECI	CCNNGG	1 cut(s)	268
BssMI	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
Bst2UI	CCWGG	2 cut(s)	269, 992
Bst4CI	ACNGT	2 cut(s)	560, 1169
BstAFI	CTTAAG	1 cut(s)	686
BstC8I	GCNNGC	4 cut(s)	141, 235, 357, 580
BstDEI	CTNAG	2 cut(s)	890, 1128
BstF5I	GGATG	3 cut(s)	857, 860, 1174
BstHHI	GCGC	2 cut(s)	382, 839
BstKTI	GATC	7 cut(s)	192, 370, 391, 478, 592, 718, 1027
BstMAI	GTCTC	2 cut(s)	566, 1124
BstMBI	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
BstMCI	CGRYCG	2 cut(s)	192, 718
BstMWI	GCNNNNNNNGC	2 cut(s)	419, 812
BstNI	CCWGG	2 cut(s)	269, 992
BstSCI	CCNGG	2 cut(s)	267, 990
BstSLI	GKGCMC	1 cut(s)	817
BstV1I	GCAGC	7 cut(s)	123, 133, 155, 224, 471, 594, 932
BstX2I	RGATCY	1 cut(s)	367
BstYI	RGATCY	1 cut(s)	367
Bsu15I	ATCGAT	1 cut(s)	718
BsuTUI	ATCGAT	1 cut(s)	718
BtsCI	GGATG	3 cut(s)	857, 860, 1174
BtsIMutI	CAGTG	3 cut(s)	46, 282, 1179
BveI	ACCTGC	1 cut(s)	89
Cac8I	GCNNGC	4 cut(s)	141, 235, 357, 580
CfoI	GCGC	2 cut(s)	382, 839
ClaI	ATCGAT	1 cut(s)	718
CsiI	ACCWGGT	1 cut(s)	990
Csp6I	GTAC	1 cut(s)	1137
CspCI	CAANNNNNGTGG	2 cut(s)	435, 470
CviAII	CATG	2 cut(s)	661, 925
CviQI	GTAC	1 cut(s)	1137
DdeI	CTNAG	2 cut(s)	890, 1128
DpnI	GATC	7 cut(s)	191, 369, 390, 477, 591, 717, 1026
DpnII	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
DraI	TTTAAA	1 cut(s)	699
Ecl136II	GAGCTC	1 cut(s)	349
Eco24I	GRGCYC	1 cut(s)	351
Eco53kI	GAGCTC	1 cut(s)	349
EcoICRI	GAGCTC	1 cut(s)	349
EcoRI	GAATTC	1 cut(s)	1118
EcoRII	CCWGG	2 cut(s)	267, 990
EcoT22I	ATGCAT	1 cut(s)	808
EcoT38I	GRGCYC	1 cut(s)	351
FaeI	CATG	2 cut(s)	664, 928
FalI	AAGNNNNNCTT	2 cut(s)	335, 367
FaqI	GGGAC	1 cut(s)	1178
FatI	CATG	2 cut(s)	660, 924
FauI	CCCGC	1 cut(s)	1073
FauNDI	CATATG	1 cut(s)	253
Fnu4HI	GCNGC	9 cut(s)	96, 137, 144, 147, 238, 485, 583, 921, 1188
FokI	GGATG	3 cut(s)	847, 864, 1161
FriOI	GRGCYC	1 cut(s)	351
Fsp4HI	GCNGC	9 cut(s)	96, 137, 144, 147, 238, 485, 583, 921, 1188
FspBI	CTAG	2 cut(s)	140, 377
GlaI	GCGC	2 cut(s)	381, 838
GluI	GCNGC	9 cut(s)	96, 137, 144, 147, 238, 485, 583, 921, 1188
GsuI	CTGGAG	1 cut(s)	1115
HhaI	GCGC	2 cut(s)	382, 839
Hin1II	CATG	2 cut(s)	664, 928
Hin6I	GCGC	2 cut(s)	380, 837
HinP1I	GCGC	2 cut(s)	380, 837
HincII	GTYRAC	1 cut(s)	1003
HindII	GTYRAC	1 cut(s)	1003
HindIII	AAGCTT	1 cut(s)	753
HinfI	GANTC	3 cut(s)	185, 741, 1145
Hpy166II	GTNNAC	1 cut(s)	1003
Hpy188I	TCNGA	4 cut(s)	316, 475, 679, 715
Hpy8I	GTNNAC	1 cut(s)	1003
Hpy99I	CGWCG	1 cut(s)	71
HpyAV	CCTTC	2 cut(s)	501, 654
HpyCH4III	ACNGT	2 cut(s)	560, 1169
HpyCH4IV	ACGT	1 cut(s)	69
HpyCH4V	TGCA	5 cut(s)	14, 240, 487, 806, 1113
HpyF10VI	GCNNNNNNNGC	2 cut(s)	419, 812
HpyF3I	CTNAG	2 cut(s)	890, 1128
HpySE526I	ACGT	1 cut(s)	69
Hsp92II	CATG	2 cut(s)	664, 928
HspAI	GCGC	2 cut(s)	380, 837
Kzo9I	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
LmnI	GCTCC	1 cut(s)	346
Lsp1109I	GCAGC	7 cut(s)	123, 133, 155, 224, 471, 594, 932
MabI	ACCWGGT	1 cut(s)	990
MaeI	CTAG	2 cut(s)	140, 377
MaeII	ACGT	1 cut(s)	69
MaeIII	GTNAC	5 cut(s)	154, 460, 610, 691, 1169
MalI	GATC	7 cut(s)	191, 369, 390, 477, 591, 717, 1026
MboI	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
MboII	GAAGA	3 cut(s)	73, 506, 542
MfeI	CAATTG	2 cut(s)	15, 479
MflI	RGATCY	1 cut(s)	367
MhlI	GDGCHC	2 cut(s)	351, 817
MlyI	GAGTC	1 cut(s)	1139
Mph1103I	ATGCAT	1 cut(s)	808
MseI	TTAA	6 cut(s)	60, 132, 342, 687, 698, 708
MspA1I	CMGCKG	2 cut(s)	146, 167
MspCI	CTTAAG	1 cut(s)	686
MspR9I	CCNGG	2 cut(s)	269, 992
MunI	CAATTG	2 cut(s)	15, 479
MvaI	CCWGG	2 cut(s)	269, 992
MwoI	GCNNNNNNNGC	2 cut(s)	419, 812
NdeI	CATATG	1 cut(s)	253
NdeII	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
NheI	GCTAGC	1 cut(s)	139
NlaIII	CATG	2 cut(s)	664, 928
NlaIV	GGNNCC	3 cut(s)	309, 369, 421
NmeAIII	GCCGAG	1 cut(s)	926
NmuCI	GTSAC	1 cut(s)	691
NsiI	ATGCAT	1 cut(s)	808
PaqCI	CACCTGC	1 cut(s)	89
PfeI	GAWTC	2 cut(s)	185, 741
PkrI	GCNGC	9 cut(s)	97, 138, 145, 148, 239, 486, 584, 922, 1189
Ple19I	CGATCG	2 cut(s)	192, 718
PleI	GAGTC	1 cut(s)	1139
PpsI	GAGTC	1 cut(s)	1139
PshBI	ATTAAT	1 cut(s)	60
Psp124BI	GAGCTC	1 cut(s)	351
Psp6I	CCWGG	2 cut(s)	267, 990
PspGI	CCWGG	2 cut(s)	267, 990
PspN4I	GGNNCC	3 cut(s)	309, 369, 421
PsuI	RGATCY	1 cut(s)	367
PvuI	CGATCG	2 cut(s)	192, 718
PvuII	CAGCTG	2 cut(s)	146, 167
RsaI	GTAC	1 cut(s)	1138
RsaNI	GTAC	1 cut(s)	1137
SacI	GAGCTC	1 cut(s)	351
SaqAI	TTAA	6 cut(s)	60, 132, 342, 687, 698, 708
SatI	GCNGC	9 cut(s)	96, 137, 144, 147, 238, 485, 583, 921, 1188
Sau3AI	GATC	7 cut(s)	189, 367, 388, 475, 589, 715, 1024
SchI	GAGTC	1 cut(s)	1139
ScrFI	CCNGG	2 cut(s)	269, 992
SduI	GDGCHC	2 cut(s)	351, 817
SexAI	ACCWGGT	1 cut(s)	990
SmlI	CTYRAG	1 cut(s)	686
SmoI	CTYRAG	1 cut(s)	686
SsiI	CCGC	5 cut(s)	95, 326, 1064, 1080, 1188
SspI	AATATT	1 cut(s)	55
SspMI	CTAG	2 cut(s)	140, 377
SstI	GAGCTC	1 cut(s)	351
StyD4I	CCNGG	2 cut(s)	267, 990
TaaI	ACNGT	2 cut(s)	560, 1169
TaiI	ACGT	1 cut(s)	72
TaqI	TCGA	4 cut(s)	188, 718, 1023, 1122
TatI	WGTACW	1 cut(s)	1136
TauI	GCSGC	2 cut(s)	98, 1190
TfiI	GAWTC	2 cut(s)	185, 741
Tru1I	TTAA	6 cut(s)	60, 132, 342, 687, 698, 708
Tru9I	TTAA	6 cut(s)	60, 132, 342, 687, 698, 708
TscAI	CASTG	3 cut(s)	46, 289, 1186
TseFI	GTSAC	1 cut(s)	691
TseI	GCWGC	7 cut(s)	136, 143, 146, 237, 484, 582, 920
Tsp45I	GTSAC	1 cut(s)	691
TspDTI	ATGAA	2 cut(s)	310, 1131
TspGWI	ACGGA	1 cut(s)	832
TspRI	CASTG	3 cut(s)	46, 289, 1186
Vha464I	CTTAAG	1 cut(s)	686
VspI	ATTAAT	1 cut(s)	60
XapI	RAATTY	1 cut(s)	1118
XcmI	CCANNNNNNNNNTGG	1 cut(s)	988
XspI	CTAG	2 cut(s)	140, 377
Zsp2I	ATGCAT	1 cut(s)	808

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.