Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0001158

Physical Location & Seq

Genomic Coordinates Reverse (-)

33316036 .. 33318527

Gene Structure 2492 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G362100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1140 bp

ATGGGAGTGGGATTCTTCTTTATGGAGTTTTCATCTTCTTCCTCCTCCCAATCTAAGTCCCAGTTGATAGTATATGTTTGTCTTGTAGTTTTTGGTCTCTTCCATTACCCCACAATTACAGTAGAGGCTGCCGTGAAGCTACCTCCAGGCCAGACAATTCCAGCGGTCATCGTGTTCGGTGATTCTATAATGGACACGGGCAACAACAACAATCTTAAGTCTCTTATTAAGTGCAATTTCTCTCCTTATGGAAGAGATTTCCAGGGACACAAGCCAACAGGCAGATTTGGCAATGGAAAAGTGCCCTCTGACTTCATAGTGGAAGAACTGGGAATCAAAAAGTATTTGCCGGCGTATTTAGATCCTAGTCTACGGCCTGAAGATCTGGCAACGGGAGTCTGCTTTGCTTCAGGTGGCACGGGATACGACCCAATGACACCCCAAATAGCGTCAGTTATATCACTGTCGGATCAGTTGTCAATGTTCAAGGAGTATATAGGGAAGCTTAAAGGCATTGTTGGAGAAGAGAGAACCAACTTCATTCTATCCAACGCTCTGTTTCTGGTGGTGGCTGGCAGCGACGACCTTGCCAACACCTATTTTACCATTCGCGCAAGAAAAGCACAGTATGATGTTCCTGCTTACACCGACCTTATGGTCAACTCCGCGTCTAGTTTCGTCAAGGAATTGTACGGACTTGGCGCGAGAAGGATTGGTCTGTTCAGTGCACCACCAATAGGATGTGTGCCTTCACAAAGAACATTAGGTGGAGGATTAGCAAGAGACTGCGCCGAAGAATACAATGAAGCAGCAAAGTTATTCAACGCTAAACTTTCCCGGTCTCTCAACTCCTTAAACACAGCCCTCCCAAACAGCAGAGTGGTCTACGTGGATGTCTACAATCCTCTACTGGATATCATTCTCAACCCTGCCAAGACTGGGTTTAAAGTTGCGGAGAAAGGATGCTGTGGGACTGGGATCATAGAGGTAGCAGTGTTATGCAACAAGTACGATGCCACGTGCGCAAATGCAAATGATTATGTGTTTTGGGATAGTTACCATCCTACAGAACGGACCTACAGTGTGCTGATTCCTCCACTACTCCGAAGATATGTAAACGATTTCCTTCTTGGCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

380

Amino Acids

41.33

Weight (kDa)

6.82

Isoelectric Point (pI)

31.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001158)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G58520 AT1G58525 AT1G58725 AT1G59030 AT1G59406 AT1G75880 AT1G75880 AT1G75890 AT1G75890 AT1G75890 AT1G75900 AT3G14820 AT3G43550 AT3G43570 AT5G42170
fragaria_vesca	FvH4_2g38112 FvH4_2g38120
malus_domestica	MD08G1009700.v1.1 MD08G1009800.v1.1 MD15G1008800.v1.1 MD15G1008900.v1.1 MD15G1009000.v1.1 MD15G1009100.v1.1 MD15G1009500.v1.1 MD15G1009600.v1.1
prunus_persica	Prupe.1G361800_v2.0.a1 Prupe.1G361800_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G361900_v2.0.a1 Prupe.1G362000_v2.0.a1 Prupe.1G362100_v2.0.a1
pyrus_communis	pycom08g00820 pycom08g00830 pycom15g00730 pycom15g00740 pycom15g00750 pycom15g00760 pycom15g00770
rosa_chinensis	RchiOBHm_Chr6g0303381 RchiOBHm_Chr6g0303411
rosa_laevigata	RLG00000011087 RLG00000011088
rosa_multiflora	Rmu_sc0002586.1_g000041 Rmu_ssc0000114.1_g000055 Rmu_ssc0000114.1_g000059
rosa_roxburghii	Rroxscaffold_7G00164790 Rroxscaffold_7G00164830
rosa_rugosa	Rorug06G0321000
rosa_samantha	Rh6AG435300 Rh6AG435400 Rh6CG447300 Rh6CG447500 Rh6DG434100 Rh6DG434200
rosa_wichuraiana	Rw6G037690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	656
Acc16I	TGCGCA	1 cut(s)	1024
AccI	GTMKAC	3 cut(s)	370, 885, 897
AccII	CGCG	3 cut(s)	612, 668, 704
AciI	CCGC	3 cut(s)	164, 666, 953
AclWI	GGATC	3 cut(s)	356, 477, 986
AcuI	CTGAAG	2 cut(s)	393, 399
AcvI	CACGTG	1 cut(s)	1020
AfaI	GTAC	2 cut(s)	692, 1010
AfiI	CCNNNNNNNGG	2 cut(s)	737, 939
AflII	CTTAAG	1 cut(s)	215
AgsI	TTSAA	2 cut(s)	487, 823
AjnI	CCWGG	2 cut(s)	145, 261
AluBI	AGCT	2 cut(s)	139, 505
AluI	AGCT	2 cut(s)	139, 505
Alw21I	GWGCWC	1 cut(s)	730
Alw26I	GTCTC	4 cut(s)	101, 225, 777, 846
Alw44I	GTGCAC	1 cut(s)	726
AlwI	GGATC	3 cut(s)	356, 477, 986
AoxI	GGCC	2 cut(s)	148, 374
ApaLI	GTGCAC	1 cut(s)	726
ApeKI	GCWGC	3 cut(s)	128, 576, 809
AspLEI	GCGC	4 cut(s)	614, 704, 791, 1025
AspS9I	GGNCC	1 cut(s)	1074
AsuC2I	CCSGG	1 cut(s)	838
AsuHPI	GGTGA	1 cut(s)	191
AvaII	GGWCC	1 cut(s)	1074
BaeGI	GKGCMC	2 cut(s)	306, 730
BbrPI	CACGTG	1 cut(s)	1020
Bbv12I	GWGCWC	1 cut(s)	730
BbvI	GCAGC	3 cut(s)	115, 588, 821
BccI	CCATC	1 cut(s)	1068
BceAI	ACGGC	2 cut(s)	116, 389
BcgI	CGANNNNNNTGC	2 cut(s)	569, 603
BciT130I	CCWGG	2 cut(s)	147, 263
BciVI	GTATCC	1 cut(s)	416
BcnI	CCSGG	1 cut(s)	838
BcoDI	GTCTC	4 cut(s)	101, 225, 777, 846
BfaI	CTAG	2 cut(s)	366, 672
BfmI	CTRYAG	2 cut(s)	1065, 1078
BfrI	CTTAAG	1 cut(s)	215
BfuI	GTATCC	1 cut(s)	416
BglII	AGATCT	1 cut(s)	382
BisI	GCNGC	3 cut(s)	129, 577, 810
BlsI	GCNGC	3 cut(s)	130, 578, 811
Bme1390I	CCNGG	3 cut(s)	147, 263, 838
Bme18I	GGWCC	1 cut(s)	1074
BmgT120I	GGNCC	1 cut(s)	1074
BmrFI	CCNGG	3 cut(s)	147, 263, 838
BmrI	ACTGGG	4 cut(s)	55, 338, 948, 984
BmsI	GCATC	2 cut(s)	953, 1003
BmuI	ACTGGG	4 cut(s)	55, 338, 948, 984
BpmI	CTGGAG	1 cut(s)	129
BpuMI	CCSGG	1 cut(s)	838
BsaAI	YACGTR	2 cut(s)	889, 1020
BsaI	GGTCTC	2 cut(s)	101, 846
BsaJI	CCNNGG	1 cut(s)	262
Bsc4I	CCNNNNNNNGG	2 cut(s)	737, 939
Bse118I	RCCGGY	1 cut(s)	349
Bse1I	ACTGG	5 cut(s)	61, 333, 915, 943, 979
Bse3DI	GCAATG	1 cut(s)	298
BseBI	CCWGG	2 cut(s)	147, 263
BseDI	CCNNGG	1 cut(s)	262
BseGI	GGATG	4 cut(s)	746, 898, 968, 1060
BseLI	CCNNNNNNNGG	2 cut(s)	737, 939
BseMI	GCAATG	1 cut(s)	298
BseNI	ACTGG	5 cut(s)	61, 333, 915, 943, 979
BseRI	GAGGAG	1 cut(s)	34
BseSI	GKGCMC	2 cut(s)	306, 730
BseXI	GCAGC	3 cut(s)	115, 588, 821
Bsh1236I	CGCG	3 cut(s)	612, 668, 704
BshFI	GGCC	2 cut(s)	150, 376
BsiHKAI	GWGCWC	1 cut(s)	730
BsiSI	CCGG	2 cut(s)	350, 838
BslFI	GGGAC	3 cut(s)	43, 279, 985
BslI	CCNNNNNNNGG	2 cut(s)	737, 939
BsmAI	GTCTC	4 cut(s)	101, 225, 777, 846
BsmFI	GGGAC	3 cut(s)	43, 279, 985
BsnI	GGCC	2 cut(s)	150, 376
Bso31I	GGTCTC	2 cut(s)	101, 846
Bsp1286I	GDGCHC	2 cut(s)	306, 730
Bsp143I	GATC	4 cut(s)	361, 382, 469, 978
BspACI	CCGC	3 cut(s)	164, 666, 953
BspANI	GGCC	2 cut(s)	150, 376
BspFNI	CGCG	3 cut(s)	612, 668, 704
BspPI	GGATC	3 cut(s)	356, 477, 986
BspTI	CTTAAG	1 cut(s)	215
BspTNI	GGTCTC	2 cut(s)	101, 846
BsrDI	GCAATG	1 cut(s)	298
BsrFI	RCCGGY	1 cut(s)	349
BsrI	ACTGG	5 cut(s)	61, 333, 915, 943, 979
BssAI	RCCGGY	1 cut(s)	349
BssECI	CCNNGG	1 cut(s)	262
BssMI	GATC	4 cut(s)	361, 382, 469, 978
Bst2UI	CCWGG	2 cut(s)	147, 263
Bst4CI	ACNGT	4 cut(s)	121, 465, 627, 1082
Bst6I	CTCTTC	3 cut(s)	104, 247, 519
BstAFI	CTTAAG	1 cut(s)	215
BstBAI	YACGTR	2 cut(s)	889, 1020
BstC8I	GCNNGC	2 cut(s)	351, 574
BstDEI	CTNAG	1 cut(s)	54
BstF5I	GGATG	4 cut(s)	746, 898, 968, 1060
BstFNI	CGCG	3 cut(s)	612, 668, 704
BstHHI	GCGC	4 cut(s)	614, 704, 791, 1025
BstKTI	GATC	4 cut(s)	364, 385, 472, 981
BstMAI	GTCTC	4 cut(s)	101, 225, 777, 846
BstMBI	GATC	4 cut(s)	361, 382, 469, 978
BstMWI	GCNNNNNNNGC	3 cut(s)	288, 620, 1022
BstNI	CCWGG	2 cut(s)	147, 263
BstSCI	CCNGG	3 cut(s)	145, 261, 836
BstSFI	CTRYAG	2 cut(s)	1065, 1078
BstSLI	GKGCMC	2 cut(s)	306, 730
BstUI	CGCG	3 cut(s)	612, 668, 704
BstV1I	GCAGC	3 cut(s)	115, 588, 821
BstX2I	RGATCY	2 cut(s)	361, 382
BstYI	RGATCY	2 cut(s)	361, 382
BsuI	GTATCC	1 cut(s)	416
BsuRI	GGCC	2 cut(s)	150, 376
BtsCI	GGATG	4 cut(s)	746, 898, 968, 1060
BtsI	GCAGTG	1 cut(s)	999
BtsIMutI	CAGTG	4 cut(s)	461, 730, 999, 1087
Cac8I	GCNNGC	2 cut(s)	351, 574
CfoI	GCGC	4 cut(s)	614, 704, 791, 1025
Cfr10I	RCCGGY	1 cut(s)	349
Cfr13I	GGNCC	1 cut(s)	1074
CseI	GACGC	2 cut(s)	438, 657
Csp6I	GTAC	2 cut(s)	691, 1009
CviJI	RGCY	8 cut(s)	128, 139, 150, 274, 376, 505, 572, 863
CviKI_1	RGCY	8 cut(s)	128, 139, 150, 274, 376, 505, 572, 863
CviQI	GTAC	2 cut(s)	691, 1009
DdeI	CTNAG	1 cut(s)	54
DpnI	GATC	4 cut(s)	363, 384, 471, 980
DpnII	GATC	4 cut(s)	361, 382, 469, 978
DraI	TTTAAA	1 cut(s)	946
DrdI	GACNNNNNNGTC	1 cut(s)	656
DseDI	GACNNNNNNGTC	1 cut(s)	656
Eam1104I	CTCTTC	3 cut(s)	104, 247, 519
EarI	CTCTTC	3 cut(s)	104, 247, 519
Eco31I	GGTCTC	2 cut(s)	101, 846
Eco32I	GATATC	1 cut(s)	916
Eco47I	GGWCC	1 cut(s)	1074
Eco57I	CTGAAG	2 cut(s)	393, 399
Eco72I	CACGTG	1 cut(s)	1020
EcoRII	CCWGG	2 cut(s)	145, 261
EcoRV	GATATC	1 cut(s)	916
FaqI	GGGAC	3 cut(s)	43, 279, 985
FblI	GTMKAC	3 cut(s)	370, 885, 897
Fnu4HI	GCNGC	3 cut(s)	129, 577, 810
FokI	GGATG	4 cut(s)	753, 905, 975, 1047
Fsp4HI	GCNGC	3 cut(s)	129, 577, 810
FspBI	CTAG	2 cut(s)	366, 672
FspI	TGCGCA	1 cut(s)	1024
GlaI	GCGC	4 cut(s)	613, 703, 790, 1024
GluI	GCNGC	3 cut(s)	129, 577, 810
GsuI	CTGGAG	1 cut(s)	129
HaeIII	GGCC	2 cut(s)	150, 376
HapII	CCGG	2 cut(s)	350, 838
HgaI	GACGC	2 cut(s)	438, 657
HhaI	GCGC	4 cut(s)	614, 704, 791, 1025
Hin6I	GCGC	4 cut(s)	612, 702, 789, 1023
HinP1I	GCGC	4 cut(s)	612, 702, 789, 1023
HincII	GTYRAC	1 cut(s)	661
HindII	GTYRAC	1 cut(s)	661
HindIII	AAGCTT	1 cut(s)	503
HinfI	GANTC	5 cut(s)	12, 182, 333, 396, 1090
HpaII	CCGG	2 cut(s)	350, 838
HphI	GGTGA	1 cut(s)	191
Hpy166II	GTNNAC	6 cut(s)	371, 661, 728, 886, 898, 1117
Hpy188I	TCNGA	3 cut(s)	310, 469, 1106
Hpy8I	GTNNAC	6 cut(s)	371, 661, 728, 886, 898, 1117
Hpy99I	CGWCG	1 cut(s)	584
HpyAV	CCTTC	3 cut(s)	702, 759, 1136
HpyCH4III	ACNGT	4 cut(s)	121, 465, 627, 1082
HpyCH4IV	ACGT	2 cut(s)	888, 1019
HpyCH4V	TGCA	4 cut(s)	234, 728, 1002, 1031
HpyF10VI	GCNNNNNNNGC	3 cut(s)	288, 620, 1022
HpyF3I	CTNAG	1 cut(s)	54
HpySE526I	ACGT	2 cut(s)	888, 1019
HspAI	GCGC	4 cut(s)	612, 702, 789, 1023
KroI	GCCGGC	1 cut(s)	349
KroNI	GCCGGC	1 cut(s)	351
Kzo9I	GATC	4 cut(s)	361, 382, 469, 978
Lsp1109I	GCAGC	3 cut(s)	115, 588, 821
LweI	GCATC	2 cut(s)	953, 1003
MaeI	CTAG	2 cut(s)	366, 672
MaeII	ACGT	2 cut(s)	888, 1019
MaeIII	GTNAC	1 cut(s)	1055
MalI	GATC	4 cut(s)	363, 384, 471, 980
MboI	GATC	4 cut(s)	361, 382, 469, 978
MflI	RGATCY	2 cut(s)	361, 382
MhlI	GDGCHC	2 cut(s)	306, 730
MluCI	AATT	4 cut(s)	114, 156, 235, 686
MlyI	GAGTC	1 cut(s)	405
MmeI	TCCRAC	3 cut(s)	447, 499, 573
MroNI	GCCGGC	1 cut(s)	349
MseI	TTAA	5 cut(s)	216, 228, 507, 854, 945
MspA1I	CMGCKG	1 cut(s)	164
MspCI	CTTAAG	1 cut(s)	215
MspI	CCGG	2 cut(s)	350, 838
MspR9I	CCNGG	3 cut(s)	147, 263, 838
MvaI	CCWGG	2 cut(s)	147, 263
MvnI	CGCG	3 cut(s)	612, 668, 704
MwoI	GCNNNNNNNGC	3 cut(s)	288, 620, 1022
NaeI	GCCGGC	1 cut(s)	351
NciI	CCSGG	1 cut(s)	838
NdeII	GATC	4 cut(s)	361, 382, 469, 978
NgoMIV	GCCGGC	1 cut(s)	349
NsbI	TGCGCA	1 cut(s)	1024
PdiI	GCCGGC	1 cut(s)	351
PfeI	GAWTC	4 cut(s)	12, 182, 333, 1090
PkrI	GCNGC	3 cut(s)	130, 578, 811
PleI	GAGTC	1 cut(s)	404
PmaCI	CACGTG	1 cut(s)	1020
PmlI	CACGTG	1 cut(s)	1020
PpsI	GAGTC	1 cut(s)	404
Ppu21I	YACGTR	2 cut(s)	889, 1020
Psp6I	CCWGG	2 cut(s)	145, 261
PspCI	CACGTG	1 cut(s)	1020
PspGI	CCWGG	2 cut(s)	145, 261
PspPI	GGNCC	1 cut(s)	1074
PsuI	RGATCY	2 cut(s)	361, 382
RsaI	GTAC	2 cut(s)	692, 1010
RsaNI	GTAC	2 cut(s)	691, 1009
SaqAI	TTAA	5 cut(s)	216, 228, 507, 854, 945
SatI	GCNGC	3 cut(s)	129, 577, 810
Sau3AI	GATC	4 cut(s)	361, 382, 469, 978
Sau96I	GGNCC	1 cut(s)	1074
SchI	GAGTC	1 cut(s)	405
ScrFI	CCNGG	3 cut(s)	147, 263, 838
SduI	GDGCHC	2 cut(s)	306, 730
SfaNI	GCATC	2 cut(s)	953, 1003
SfcI	CTRYAG	2 cut(s)	1065, 1078
SinI	GGWCC	1 cut(s)	1074
SmlI	CTYRAG	1 cut(s)	215
SmoI	CTYRAG	1 cut(s)	215
Sse9I	AATT	4 cut(s)	114, 156, 235, 686
SsiI	CCGC	3 cut(s)	164, 666, 953
SspMI	CTAG	2 cut(s)	366, 672
StyD4I	CCNGG	3 cut(s)	145, 261, 836
TaaI	ACNGT	4 cut(s)	121, 465, 627, 1082
TaiI	ACGT	2 cut(s)	891, 1022
TasI	AATT	4 cut(s)	114, 156, 235, 686
TfiI	GAWTC	4 cut(s)	12, 182, 333, 1090
Tru1I	TTAA	5 cut(s)	216, 228, 507, 854, 945
Tru9I	TTAA	5 cut(s)	216, 228, 507, 854, 945
TscAI	CASTG	4 cut(s)	468, 730, 999, 1087
TseI	GCWGC	3 cut(s)	128, 576, 809
TspDTI	ATGAA	4 cut(s)	21, 304, 529, 819
TspGWI	ACGGA	2 cut(s)	708, 1087
TspRI	CASTG	4 cut(s)	468, 730, 999, 1087
Vha464I	CTTAAG	1 cut(s)	215
VneI	GTGCAC	1 cut(s)	726
VpaK11BI	GGWCC	1 cut(s)	1074
XmiI	GTMKAC	3 cut(s)	370, 885, 897
XspI	CTAG	2 cut(s)	366, 672

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.