Prupe.3G303200_v2.0.a1

Epidermal growth factor receptor substrate 15-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0001694
Physical Location & Seq
Reverse (-)
26675425 .. 26676502
1078 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G303200.1

Sequence Viewer

Length: 222 bp
ATGGCGCAAAACCAATCGGCGAATGTGGATCTCTTCGATGCATATTTAAGACGAGCCGATTTGGACCGCGATGGCCGGATTAGTGGCAACGAAGCGGTCGCTCTCTTCCAAGCCTCCGGTCTCCCCCAACCGGTCCTTGCGCAGGAGGAGGAGGCTTCAGAGAGAAAATCAGTTGTCGCATTGTACTTGCAGTGTTTGGCAGCCCATAAATTTACAGGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EF-hand_4 EF-hand_5

Protein Analysis

74

Amino Acids

7.97

Weight (kDa)

4.87

Isoelectric Point (pI)

55.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 141
AccII CGCG 1 cut(s) 69
AciI CCGC 2 cut(s) 67, 95
AclWI GGATC 1 cut(s) 36
AcoI YGGCCR 1 cut(s) 73
AcsI RAATTY 1 cut(s) 209
AcuI CTGAAG 1 cut(s) 141
AfaI GTAC 1 cut(s) 185
AfiI CCNNNNNNNGG 2 cut(s) 130, 142
AgeI ACCGGT 1 cut(s) 130
Alw26I GTCTC 1 cut(s) 125
AlwI GGATC 1 cut(s) 36
AoxI GGCC 1 cut(s) 73
ApeKI GCWGC 1 cut(s) 200
ApoI RAATTY 1 cut(s) 209
AsiGI ACCGGT 1 cut(s) 130
AspLEI GCGC 2 cut(s) 7, 142
AspS9I GGNCC 2 cut(s) 64, 133
AvaII GGWCC 2 cut(s) 64, 133
BbvI GCAGC 1 cut(s) 212
BccI CCATC 1 cut(s) 65
BcoDI GTCTC 1 cut(s) 125
BisI GCNGC 1 cut(s) 201
BlsI GCNGC 1 cut(s) 202
Bme18I GGWCC 2 cut(s) 64, 133
BmgT120I GGNCC 2 cut(s) 64, 133
BmsI GCATC 1 cut(s) 28
BsaI GGTCTC 1 cut(s) 125
BsaWI WCCGGW 2 cut(s) 116, 130
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 142
Bse118I RCCGGY 1 cut(s) 130
BseLI CCNNNNNNNGG 2 cut(s) 130, 142
BseRI GAGGAG 2 cut(s) 161, 164
BseXI GCAGC 1 cut(s) 212
Bsh1236I CGCG 1 cut(s) 69
Bsh1285I CGRYCG 1 cut(s) 99
BshFI GGCC 1 cut(s) 75
BshTI ACCGGT 1 cut(s) 130
BsiEI CGRYCG 1 cut(s) 99
BsiSI CCGG 3 cut(s) 76, 117, 131
BslI CCNNNNNNNGG 2 cut(s) 130, 142
BsmAI GTCTC 1 cut(s) 125
BsnI GGCC 1 cut(s) 75
Bso31I GGTCTC 1 cut(s) 125
Bsp143I GATC 1 cut(s) 28
BspACI CCGC 2 cut(s) 67, 95
BspANI GGCC 1 cut(s) 75
BspFNI CGCG 1 cut(s) 69
BspPI GGATC 1 cut(s) 36
BspTNI GGTCTC 1 cut(s) 125
BsrFI RCCGGY 1 cut(s) 130
BssAI RCCGGY 1 cut(s) 130
BssMI GATC 1 cut(s) 28
Bst6I CTCTTC 2 cut(s) 38, 110
BstENI CCTNNNNNAGG 1 cut(s) 140
BstFNI CGCG 1 cut(s) 69
BstHHI GCGC 2 cut(s) 7, 142
BstKTI GATC 1 cut(s) 31
BstMAI GTCTC 1 cut(s) 125
BstMBI GATC 1 cut(s) 28
BstMCI CGRYCG 1 cut(s) 99
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 212
BstX2I RGATCY 1 cut(s) 28
BstYI RGATCY 1 cut(s) 28
BsuRI GGCC 1 cut(s) 75
BtgZI GCGATG 1 cut(s) 84
BtsI GCAGTG 1 cut(s) 197
BtsIMutI CAGTG 1 cut(s) 197
CfoI GCGC 2 cut(s) 7, 142
Cfr10I RCCGGY 1 cut(s) 130
Cfr13I GGNCC 2 cut(s) 64, 133
Csp6I GTAC 1 cut(s) 184
CspAI ACCGGT 1 cut(s) 130
CviJI RGCY 5 cut(s) 56, 75, 113, 155, 203
CviKI_1 RGCY 5 cut(s) 56, 75, 113, 155, 203
CviQI GTAC 1 cut(s) 184
DpnI GATC 1 cut(s) 30
DpnII GATC 1 cut(s) 28
EaeI YGGCCR 1 cut(s) 73
Eam1104I CTCTTC 2 cut(s) 38, 110
EarI CTCTTC 2 cut(s) 38, 110
Eco31I GGTCTC 1 cut(s) 125
Eco47I GGWCC 2 cut(s) 64, 133
Eco57I CTGAAG 1 cut(s) 141
EcoNI CCTNNNNNAGG 1 cut(s) 140
EcoT22I ATGCAT 1 cut(s) 43
FaiI YATR 2 cut(s) 43, 207
Fnu4HI GCNGC 1 cut(s) 201
Fsp4HI GCNGC 1 cut(s) 201
FspI TGCGCA 1 cut(s) 141
GlaI GCGC 2 cut(s) 6, 141
GluI GCNGC 1 cut(s) 201
HaeIII GGCC 1 cut(s) 75
HapII CCGG 3 cut(s) 76, 117, 131
HhaI GCGC 2 cut(s) 7, 142
Hin6I GCGC 2 cut(s) 5, 140
HinP1I GCGC 2 cut(s) 5, 140
HpaII CCGG 3 cut(s) 76, 117, 131
Hpy188I TCNGA 1 cut(s) 160
HpyCH4V TGCA 2 cut(s) 41, 190
HspAI GCGC 2 cut(s) 5, 140
Kzo9I GATC 1 cut(s) 28
LpnPI CCDG 5 cut(s) 89, 128, 130, 144, 201
Lsp1109I GCAGC 1 cut(s) 212
LweI GCATC 1 cut(s) 28
MalI GATC 1 cut(s) 30
MboI GATC 1 cut(s) 28
MboII GAAGA 2 cut(s) 25, 97
MflI RGATCY 1 cut(s) 28
MluCI AATT 1 cut(s) 209
MnlI CCTC 4 cut(s) 124, 139, 142, 145
Mph1103I ATGCAT 1 cut(s) 43
MseI TTAA 1 cut(s) 47
MspI CCGG 3 cut(s) 76, 117, 131
MvnI CGCG 1 cut(s) 69
NdeII GATC 1 cut(s) 28
NsbI TGCGCA 1 cut(s) 141
NsiI ATGCAT 1 cut(s) 43
PinAI ACCGGT 1 cut(s) 130
PkrI GCNGC 1 cut(s) 202
PspPI GGNCC 2 cut(s) 64, 133
PsuI RGATCY 1 cut(s) 28
RsaI GTAC 1 cut(s) 185
RsaNI GTAC 1 cut(s) 184
SaqAI TTAA 1 cut(s) 47
SatI GCNGC 1 cut(s) 201
Sau3AI GATC 1 cut(s) 28
Sau96I GGNCC 2 cut(s) 64, 133
SetI ASST 1 cut(s) 220
SfaNI GCATC 1 cut(s) 28
SgeI CNNG 9 cut(s) 65, 80, 88, 122, 129, 143, 149, 155, 199
SinI GGWCC 2 cut(s) 64, 133
Sse9I AATT 1 cut(s) 209
SsiI CCGC 2 cut(s) 67, 95
TaqI TCGA 1 cut(s) 36
TasI AATT 1 cut(s) 209
TatI WGTACW 1 cut(s) 183
Tru1I TTAA 1 cut(s) 47
Tru9I TTAA 1 cut(s) 47
TscAI CASTG 1 cut(s) 197
TseI GCWGC 1 cut(s) 200
TspRI CASTG 1 cut(s) 197
VpaK11BI GGWCC 2 cut(s) 64, 133
XagI CCTNNNNNAGG 1 cut(s) 140
XapI RAATTY 1 cut(s) 209
Zsp2I ATGCAT 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.