Prupe.4G209900_v2.0.a1

acetylation-dependent protein binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000736
Physical Location & Seq
Reverse (-)
13094733 .. 13095917
1185 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G209900.1

Sequence Viewer

Length: 1185 bp
ATGGCGTTGTCTACTCGAAATCGAAAGCGTAAACAATTGGGGGATGGCGTTGCTCCGTTTGAGTTTCCATTTCAGACCCAGAAGATCAAGAGGGTTTCTGGGGTTTTTGAGACCCAACAGAATTTAGCCGTGGAGAAAAAGCCGACTACTTCTCTTCCTCTGCGCAAGGGTTTGTCGCCCAAACAGATAAAGACCATCCCTTTGGCTTCGTCTCCTAGAAAGCATAGAAAATCGGAGGAGTTAGGTTTTGATGGTCTCTGTCAGACTCAGAAGATCAAGAGGCAAAAACTAGGTTTTGAGTTTGATTGTTCTGAAATTTTGGGGTGTCTGATGAACCTCCGCCATTTGAGTAGGTACTTTGAGAAGCCTGTTGTTGATCCGGTTTATTTCCACGACATCTGGAGGCCGATGGATTTCGGTACTGTGAAATCCAAATTGGAGAGGGGTGTCTACTCCAGTCCTGATGGGTTTGCTGCTGATGTGAGGCTTACCTTGTCAAATGCTTTAAGATATTATCCGCCTGGGAGGATTGAGCGTGCAGCAGCCAAGCATCTCAGTGGTGTTTTTGAGAGCAAGTGGAAGGAAGCCCTGGAGAAAAACCCCAAGTCTGTTTGTCCTTCTCCTCTGCCCGAAGTGAAGGGTTTGGCAGTGTTACCCAAACTGAAACAGGGCAAGAGCTCTTCTCCTTCTAGCGTTCTTCAAAGTCAAGGGCTTGGTGTTTCTGATTCTCAGTCAGTTGATTCAACCAAACACGATGAGTTGGCCACCCTTGTTGATAATGCCATGGATCAGGCCTCAGAGAATCTTTCCCAATGTAAGGCCGTCCGAATTCATGCACTAAAGCTACGATTTTCAGGTACTATATCGAAAGCAAACAAGATACTTAAGGGTATACCTGATTCTCCACCAAGGAGAAAATCGATGCAGCGGATGAAGCAAAGGGAGTCGGCTCGCCATGCCATTTCGAACATGAAGAAGTCAGTGCAATTTGAGGACCCTTTACAGGATCTCAAACAACTTGAGATGCTGTGTGGCTGTGGCAGTGAAGATCCTTTTCTACAGGTCCGCCTCGGAATGCCGCTTAAGAAATTGGGTGTATTCCTCAGGGAAGATGATGAGTTGCAAGGTCAGGACGAGGAAGCCTTTTTGAATGGAGATCGGGAGGAAGGTGAGATCTGCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BET Bromodomain

Protein Analysis

395

Amino Acids

44.17

Weight (kDa)

9.47

Isoelectric Point (pI)

51.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 164
AccI GTMKAC 3 cut(s) 11, 450, 892
AciI CCGC 5 cut(s) 340, 518, 928, 1066, 1079
AclWI GGATC 4 cut(s) 371, 795, 1014, 1043
AcoI YGGCCR 1 cut(s) 762
AcsI RAATTY 3 cut(s) 121, 315, 828
AfaI GTAC 3 cut(s) 356, 421, 859
AfiI CCNNNNNNNGG 2 cut(s) 817, 1003
AflII CTTAAG 2 cut(s) 884, 1082
AgsI TTSAA 3 cut(s) 701, 744, 1150
AjnI CCWGG 2 cut(s) 520, 588
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AluBI AGCT 2 cut(s) 678, 844
AluI AGCT 2 cut(s) 678, 844
Alw21I GWGCWC 1 cut(s) 680
Alw26I GTCTC 3 cut(s) 104, 216, 260
AlwI GGATC 4 cut(s) 371, 795, 1014, 1043
AoxI GGCC 4 cut(s) 404, 762, 792, 819
ApeKI GCWGC 4 cut(s) 473, 539, 542, 925
ApoI RAATTY 3 cut(s) 121, 315, 828
ArsI GACNNNNNNTTYG 2 cut(s) 184, 216
AspLEI GCGC 1 cut(s) 165
AspS9I GGNCC 2 cut(s) 994, 1063
AsuHPI GGTGA 1 cut(s) 1181
AsuII TTCGAA 1 cut(s) 965
AvaII GGWCC 2 cut(s) 994, 1063
AxyI CCTNAGG 1 cut(s) 1103
BalI TGGCCA 1 cut(s) 764
BanII GRGCYC 1 cut(s) 680
Bbv12I GWGCWC 1 cut(s) 680
BbvI GCAGC 4 cut(s) 460, 551, 554, 937
BccI CCATC 5 cut(s) 38, 203, 245, 403, 458
BceAI ACGGC 2 cut(s) 113, 806
BciT130I CCWGG 2 cut(s) 522, 590
BcoDI GTCTC 3 cut(s) 104, 216, 260
BfaI CTAG 3 cut(s) 216, 290, 690
BfmI CTRYAG 1 cut(s) 1058
BfrI CTTAAG 2 cut(s) 884, 1082
BglII AGATCT 1 cut(s) 1173
BisI GCNGC 5 cut(s) 474, 540, 543, 926, 1079
BlsI GCNGC 5 cut(s) 475, 541, 544, 927, 1080
Bme1390I CCNGG 2 cut(s) 522, 590
Bme18I GGWCC 2 cut(s) 994, 1063
BmgT120I GGNCC 2 cut(s) 994, 1063
BmiI GGNNCC 1 cut(s) 996
BmrFI CCNGG 2 cut(s) 522, 590
BmsI GCATC 3 cut(s) 559, 912, 1014
BplI GAGNNNNNCTC 3 cut(s) 667, 699, 1163
BpmI CTGGAG 3 cut(s) 421, 439, 611
Bpu14I TTCGAA 1 cut(s) 965
BpuEI CTTGAG 1 cut(s) 1040
Bsa29I ATCGAT 1 cut(s) 920
BsaI GGTCTC 2 cut(s) 104, 260
BsaJI CCNNGG 6 cut(s) 129, 521, 588, 783, 908, 1069
BsaWI WCCGGW 1 cut(s) 379
Bsc4I CCNNNNNNNGG 2 cut(s) 817, 1003
Bse1I ACTGG 1 cut(s) 456
Bse21I CCTNAGG 1 cut(s) 1103
BseBI CCWGG 2 cut(s) 522, 590
BseCI ATCGAT 1 cut(s) 920
BseDI CCNNGG 6 cut(s) 129, 521, 588, 783, 908, 1069
BseGI GGATG 3 cut(s) 49, 195, 936
BseLI CCNNNNNNNGG 2 cut(s) 817, 1003
BseMII CTCAG 5 cut(s) 281, 568, 743, 810, 1117
BseNI ACTGG 1 cut(s) 456
BseRI GAGGAG 2 cut(s) 251, 612
BseXI GCAGC 4 cut(s) 460, 551, 554, 937
BsgI GTGCAG 1 cut(s) 558
BshFI GGCC 4 cut(s) 406, 764, 794, 821
BshVI ATCGAT 1 cut(s) 920
BsiHKAI GWGCWC 1 cut(s) 680
BsiSI CCGG 1 cut(s) 380
BslI CCNNNNNNNGG 2 cut(s) 817, 1003
BsmAI GTCTC 3 cut(s) 104, 216, 260
BsmBI CGTCTC 1 cut(s) 216
BsmI GAATGC 1 cut(s) 1080
BsnI GGCC 4 cut(s) 406, 764, 794, 821
Bso31I GGTCTC 2 cut(s) 104, 260
Bsp119I TTCGAA 1 cut(s) 965
Bsp1286I GDGCHC 1 cut(s) 680
Bsp143I GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
Bsp19I CCATGG 1 cut(s) 783
BspACI CCGC 5 cut(s) 340, 518, 928, 1066, 1079
BspANI GGCC 4 cut(s) 406, 764, 794, 821
BspCNI CTCAG 5 cut(s) 280, 567, 742, 809, 1116
BspDI ATCGAT 1 cut(s) 920
BspLI GGNNCC 1 cut(s) 996
BspPI GGATC 4 cut(s) 371, 795, 1014, 1043
BspQI GCTCTTC 1 cut(s) 685
BspT104I TTCGAA 1 cut(s) 965
BspTI CTTAAG 2 cut(s) 884, 1082
BspTNI GGTCTC 2 cut(s) 104, 260
BsrI ACTGG 1 cut(s) 456
BssECI CCNNGG 6 cut(s) 129, 521, 588, 783, 908, 1069
BssMI GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
BssNAI GTATAC 1 cut(s) 893
BssT1I CCWWGG 2 cut(s) 783, 908
Bst1107I GTATAC 1 cut(s) 893
Bst2UI CCWGG 2 cut(s) 522, 590
Bst4CI ACNGT 1 cut(s) 424
Bst6I CTCTTC 2 cut(s) 159, 685
BstAFI CTTAAG 2 cut(s) 884, 1082
BstBI TTCGAA 1 cut(s) 965
BstC8I GCNNGC 2 cut(s) 537, 952
BstDEI CTNAG 5 cut(s) 267, 554, 729, 796, 1103
BstDSI CCRYGG 2 cut(s) 129, 783
BstF5I GGATG 3 cut(s) 49, 195, 936
BstHHI GCGC 1 cut(s) 165
BstKTI GATC 8 cut(s) 87, 276, 379, 790, 1009, 1051, 1159, 1176
BstMAI GTCTC 3 cut(s) 104, 216, 260
BstMBI GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
BstMWI GCNNNNNNNGC 2 cut(s) 934, 956
BstNI CCWGG 2 cut(s) 522, 590
BstSCI CCNGG 2 cut(s) 520, 588
BstSFI CTRYAG 1 cut(s) 1058
BstV1I GCAGC 4 cut(s) 460, 551, 554, 937
BstX2I RGATCY 3 cut(s) 1006, 1048, 1173
BstXI CCANNNNNNTGG 1 cut(s) 202
BstYI RGATCY 3 cut(s) 1006, 1048, 1173
BstZ17I GTATAC 1 cut(s) 893
Bsu15I ATCGAT 1 cut(s) 920
Bsu36I CCTNAGG 1 cut(s) 1103
BsuRI GGCC 4 cut(s) 406, 764, 794, 821
BsuTUI ATCGAT 1 cut(s) 920
BtgI CCRYGG 2 cut(s) 129, 783
BtsCI GGATG 3 cut(s) 49, 195, 936
BtsI GCAGTG 2 cut(s) 654, 1048
BtsIMutI CAGTG 4 cut(s) 562, 654, 987, 1048
Cac8I GCNNGC 2 cut(s) 537, 952
CfoI GCGC 1 cut(s) 165
Cfr13I GGNCC 2 cut(s) 994, 1063
ClaI ATCGAT 1 cut(s) 920
Csp6I GTAC 3 cut(s) 355, 420, 858
CspCI CAANNNNNGTGG 2 cut(s) 754, 789
CviAII CATG 4 cut(s) 784, 833, 956, 970
CviQI GTAC 3 cut(s) 355, 420, 858
DdeI CTNAG 5 cut(s) 267, 554, 729, 796, 1103
DpnI GATC 8 cut(s) 86, 275, 378, 789, 1008, 1050, 1158, 1175
DpnII GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
EaeI YGGCCR 1 cut(s) 762
Eam1104I CTCTTC 2 cut(s) 159, 685
EarI CTCTTC 2 cut(s) 159, 685
EciI GGCGGA 3 cut(s) 329, 507, 1055
Ecl136II GAGCTC 1 cut(s) 678
Eco130I CCWWGG 2 cut(s) 783, 908
Eco147I AGGCCT 1 cut(s) 794
Eco24I GRGCYC 1 cut(s) 680
Eco31I GGTCTC 2 cut(s) 104, 260
Eco47I GGWCC 2 cut(s) 994, 1063
Eco53kI GAGCTC 1 cut(s) 678
Eco81I CCTNAGG 1 cut(s) 1103
EcoICRI GAGCTC 1 cut(s) 678
EcoO109I RGGNCCY 1 cut(s) 994
EcoRI GAATTC 1 cut(s) 828
EcoRII CCWGG 2 cut(s) 520, 588
EcoT14I CCWWGG 2 cut(s) 783, 908
EcoT38I GRGCYC 1 cut(s) 680
ErhI CCWWGG 2 cut(s) 783, 908
Esp3I CGTCTC 1 cut(s) 216
FaeI CATG 4 cut(s) 787, 836, 959, 973
FaiI YATR 7 cut(s) 225, 785, 834, 863, 893, 957, 971
FatI CATG 4 cut(s) 783, 832, 955, 969
FblI GTMKAC 3 cut(s) 11, 450, 892
Fnu4HI GCNGC 5 cut(s) 474, 540, 543, 926, 1079
FokI GGATG 3 cut(s) 56, 182, 943
FriOI GRGCYC 1 cut(s) 680
Fsp4HI GCNGC 5 cut(s) 474, 540, 543, 926, 1079
FspBI CTAG 3 cut(s) 216, 290, 690
FspI TGCGCA 1 cut(s) 164
GlaI GCGC 1 cut(s) 164
GluI GCNGC 5 cut(s) 474, 540, 543, 926, 1079
GsuI CTGGAG 3 cut(s) 421, 439, 611
HaeIII GGCC 4 cut(s) 406, 764, 794, 821
HapII CCGG 1 cut(s) 380
HhaI GCGC 1 cut(s) 165
Hin1II CATG 4 cut(s) 787, 836, 959, 973
Hin6I GCGC 1 cut(s) 163
HinP1I GCGC 1 cut(s) 163
HinfI GANTC 6 cut(s) 265, 725, 740, 802, 899, 944
HpaII CCGG 1 cut(s) 380
HphI GGTGA 1 cut(s) 1181
Hpy166II GTNNAC 4 cut(s) 12, 32, 451, 893
Hpy188III TCNNGA 7 cut(s) 88, 277, 400, 461, 1130, 1160, 1182
Hpy8I GTNNAC 4 cut(s) 12, 32, 451, 893
HpyAV CCTTC 5 cut(s) 574, 627, 631, 696, 1160
HpyCH4III ACNGT 1 cut(s) 424
HpyCH4V TGCA 5 cut(s) 539, 836, 925, 985, 1123
HpyF10VI GCNNNNNNNGC 2 cut(s) 934, 956
HpyF3I CTNAG 5 cut(s) 267, 554, 729, 796, 1103
Hsp92II CATG 4 cut(s) 787, 836, 959, 973
HspAI GCGC 1 cut(s) 163
Kzo9I GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
LguI GCTCTTC 1 cut(s) 685
LmnI GCTCC 1 cut(s) 58
Lsp1109I GCAGC 4 cut(s) 460, 551, 554, 937
LweI GCATC 3 cut(s) 559, 912, 1014
MaeI CTAG 3 cut(s) 216, 290, 690
MaeIII GTNAC 1 cut(s) 651
MalI GATC 8 cut(s) 86, 275, 378, 789, 1008, 1050, 1158, 1175
MboI GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
MboII GAAGA 8 cut(s) 94, 146, 283, 672, 689, 985, 1058, 1121
MfeI CAATTG 1 cut(s) 35
MflI RGATCY 3 cut(s) 1006, 1048, 1173
MhlI GDGCHC 1 cut(s) 680
MlsI TGGCCA 1 cut(s) 764
MluCI AATT 7 cut(s) 35, 121, 315, 434, 828, 986, 1088
MluNI TGGCCA 1 cut(s) 764
MlyI GAGTC 2 cut(s) 259, 953
Mox20I TGGCCA 1 cut(s) 764
MscI TGGCCA 1 cut(s) 764
MseI TTAA 3 cut(s) 506, 885, 1083
MslI CAYNNNNRTG 1 cut(s) 555
Msp20I TGGCCA 1 cut(s) 764
MspA1I CMGCKG 1 cut(s) 928
MspCI CTTAAG 2 cut(s) 884, 1082
MspI CCGG 1 cut(s) 380
MspR9I CCNGG 2 cut(s) 522, 590
MunI CAATTG 1 cut(s) 35
Mva1269I GAATGC 1 cut(s) 1080
MvaI CCWGG 2 cut(s) 522, 590
MwoI GCNNNNNNNGC 2 cut(s) 934, 956
NcoI CCATGG 1 cut(s) 783
NdeII GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
NlaIII CATG 4 cut(s) 787, 836, 959, 973
NlaIV GGNNCC 1 cut(s) 996
NsbI TGCGCA 1 cut(s) 164
NspV TTCGAA 1 cut(s) 965
PceI AGGCCT 1 cut(s) 794
PciSI GCTCTTC 1 cut(s) 685
PctI GAATGC 1 cut(s) 1080
PfeI GAWTC 4 cut(s) 725, 740, 802, 899
PkrI GCNGC 5 cut(s) 475, 541, 544, 927, 1080
PleI GAGTC 2 cut(s) 259, 952
PpsI GAGTC 2 cut(s) 259, 952
PpuMI RGGWCCY 1 cut(s) 994
Psp124BI GAGCTC 1 cut(s) 680
Psp5II RGGWCCY 1 cut(s) 994
Psp6I CCWGG 2 cut(s) 520, 588
PspGI CCWGG 2 cut(s) 520, 588
PspN4I GGNNCC 1 cut(s) 996
PspPI GGNCC 2 cut(s) 994, 1063
PspPPI RGGWCCY 1 cut(s) 994
PsuI RGATCY 3 cut(s) 1006, 1048, 1173
RsaI GTAC 3 cut(s) 356, 421, 859
RsaNI GTAC 3 cut(s) 355, 420, 858
RseI CAYNNNNRTG 1 cut(s) 555
SacI GAGCTC 1 cut(s) 680
SapI GCTCTTC 1 cut(s) 685
SaqAI TTAA 3 cut(s) 506, 885, 1083
SatI GCNGC 5 cut(s) 474, 540, 543, 926, 1079
Sau3AI GATC 8 cut(s) 84, 273, 376, 787, 1006, 1048, 1156, 1173
Sau96I GGNCC 2 cut(s) 994, 1063
SchI GAGTC 2 cut(s) 259, 953
ScrFI CCNGG 2 cut(s) 522, 590
SduI GDGCHC 1 cut(s) 680
SfaNI GCATC 3 cut(s) 559, 912, 1014
SfcI CTRYAG 1 cut(s) 1058
SfuI TTCGAA 1 cut(s) 965
SinI GGWCC 2 cut(s) 994, 1063
SmiMI CAYNNNNRTG 1 cut(s) 555
SmlI CTYRAG 3 cut(s) 884, 1019, 1082
SmoI CTYRAG 3 cut(s) 884, 1019, 1082
Sse9I AATT 7 cut(s) 35, 121, 315, 434, 828, 986, 1088
SseBI AGGCCT 1 cut(s) 794
SsiI CCGC 5 cut(s) 340, 518, 928, 1066, 1079
SspMI CTAG 3 cut(s) 216, 290, 690
SstI GAGCTC 1 cut(s) 680
StuI AGGCCT 1 cut(s) 794
StyD4I CCNGG 2 cut(s) 520, 588
StyI CCWWGG 2 cut(s) 783, 908
TaaI ACNGT 1 cut(s) 424
TaqI TCGA 5 cut(s) 16, 22, 866, 920, 965
TasI AATT 7 cut(s) 35, 121, 315, 434, 828, 986, 1088
TauI GCSGC 1 cut(s) 1081
TfiI GAWTC 4 cut(s) 725, 740, 802, 899
Tru1I TTAA 3 cut(s) 506, 885, 1083
Tru9I TTAA 3 cut(s) 506, 885, 1083
TscAI CASTG 4 cut(s) 562, 654, 987, 1048
TseI GCWGC 4 cut(s) 473, 539, 542, 925
TspDTI ATGAA 4 cut(s) 347, 821, 947, 986
TspGWI ACGGA 1 cut(s) 45
TspRI CASTG 4 cut(s) 562, 654, 987, 1048
Vha464I CTTAAG 2 cut(s) 884, 1082
VpaK11BI GGWCC 2 cut(s) 994, 1063
XapI RAATTY 3 cut(s) 121, 315, 828
XmiI GTMKAC 3 cut(s) 11, 450, 892
XspI CTAG 3 cut(s) 216, 290, 690
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.