Prupe.8G049900_v2.0.a1

acetylation-dependent protein binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000736
Physical Location & Seq
Forward (+)
5440937 .. 5442792
1856 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G049900.1

Sequence Viewer

Length: 1428 bp
ATGGCGTCGTCTGTCATAAAGCGCAGACAATTGGAGGATGGCTTTGGTTCCTTTGAGTTTCAGTTTCAGACCCAGAAGAGGATAAGGTCTTCTAGGGTTTCTGAGACCCAACGGAATGTAGCCGTTGAGGAAAAGTCGACTGTTGGTCTTCCTCTGCGCAAGGGTTTGGCTTCGTCTGCTACAAAAAATGCCGACCCAGAATCAGAAGAGTTGGGTTTCGATGAAATCTGTCAGACCCAGAAGAGGAAGAGGTCTTCTAGAGTTTCTGAGACCCAACGAAATGTAGCCGTTGTGGAAAAGTCGACTGTTGGTCTTCCTCTGTGCAAGGGTTTGGCTTCGTCTGCTACAAAAAATGCCAACCCAGAATCAGAAGAGGGTTTTGATGAAATCTGTCAAACCCAGAAGAGGAAGAGGTCTTCTAGGGTTTCTGAGACCCAACGGAAGGAAAAGCCGACTGTTGGTCTTCCTCTGCGCCAAGTCAAAGATTTGGCTTCGTCTGCTTCAAAAGAGACGTTGGATTGTTCTAAAGTCTTGCATTCTCTGATGAACCTCGGCCATGCGAGCTACTTCAACAAGCCTGTTGTTGATCCTGTGGCTGAGAATTTGCCGGGTTATTTCGACGAAATCTGGAGGCCGATGGATTTGGGTACTGTGAAATCGAAATTGGATAGGGGTGTCTACTCCAGCGCTGATGGCTTTGCTGCTGATGTCAGGCTTATCTTCTCAAACGCTTTCAGATATTTCCCCCTTGGTAGTAGAAATCGTGCAGCAGCGAAGCATCTCAGTGGGGTTTTTGAGACCCAATGGAAAGAAGCGGAGGAGAAAATGTCAAAGACCGCTTGTCCTCCTCCTACTCCTCCTCTGCCCAAACGGAGACCAAATGGCAAGAGCTCTTCTGCTTGTAGGGTTCTTATACAAAGTCAAGTGGTTGTTGGGGTTTCTGATTCTCACTCAGTTAAGTCAACCAAAGATGATGACTTGGGCACCCTTGTTCATCATGCCATGTATCAGGCCACAGACAATCTTTCTCCATGTAAGGCTAGGCGAATTCAGTCGCTGAAGATGCGATTTTCAGGTACAATACGAAAAGCAAACAAGATACTTAAGGGTCTACCTGATTCTCCACCAAGGAGAAAATTGATGCATCGGATGGGTCAAAGGGAATTGGCTCGCCGTGCCGTTTTGAACATGGAGAAGTCAGTCCAATTTGAGGACCCTTTAAAGGATCTCAAACAACTTGAGATTCTGTGTGGCTGTGGCAGTGAAAAGGTCTACCTTGGATTGCCCCTTAAGCATTTGGGTTTATACCTCAAAGAAGATGACGAGTTACAGGGTCAGGACGAGGAGGCTTTTCTGAATGGAGATCGGGAGGAAGGCGAGATCTGCTGGCAGGAAAGCGATTGGGAGGAAGGTGAGATCCGCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BET Bromodomain

Protein Analysis

476

Amino Acids

53.16

Weight (kDa)

9.11

Isoelectric Point (pI)

57.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 158
AccB1I GGYRCC 1 cut(s) 983
AccBSI CCGCTC 1 cut(s) 1422
AccI GTMKAC 5 cut(s) 137, 302, 678, 1111, 1272
AciI CCGC 3 cut(s) 815, 837, 1420
AclWI GGATC 3 cut(s) 581, 1233, 1411
AcoI YGGCCR 1 cut(s) 553
AcsI RAATTY 2 cut(s) 601, 1047
AcuI CTGAAG 1 cut(s) 1079
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 2 cut(s) 649, 1078
AfeI AGCGCT 1 cut(s) 688
AfiI CCNNNNNNNGG 7 cut(s) 78, 243, 405, 442, 458, 1210, 1222
AflII CTTAAG 2 cut(s) 1103, 1289
AgsI TTSAA 3 cut(s) 504, 571, 1186
AhdI GACNNNNNGTC 4 cut(s) 144, 309, 459, 840
AjuI GAANNNNNNNTTGG 2 cut(s) 647, 679
AluBI AGCT 2 cut(s) 564, 891
AluI AGCT 2 cut(s) 564, 891
Alw21I GWGCWC 1 cut(s) 893
Alw26I GTCTC 6 cut(s) 98, 263, 425, 503, 791, 868
AlwI GGATC 3 cut(s) 581, 1233, 1411
AlwNI CAGNNNCTG 1 cut(s) 1057
Aor51HI AGCGCT 1 cut(s) 688
AoxI GGCC 3 cut(s) 553, 632, 1011
ApeKI GCWGC 3 cut(s) 701, 767, 770
ApoI RAATTY 2 cut(s) 601, 1047
AspLEI GCGC 4 cut(s) 24, 159, 474, 689
AspS9I GGNCC 1 cut(s) 1213
AsuC2I CCSGG 1 cut(s) 609
AsuHPI GGTGA 1 cut(s) 1424
AvaII GGWCC 1 cut(s) 1213
BaeGI GKGCMC 1 cut(s) 986
BanI GGYRCC 1 cut(s) 983
BanII GRGCYC 1 cut(s) 893
BbsI GAAGAC 6 cut(s) 81, 140, 246, 305, 408, 455
Bbv12I GWGCWC 1 cut(s) 893
BbvI GCAGC 3 cut(s) 688, 779, 782
BccI CCATC 4 cut(s) 32, 631, 686, 1144
BceAI ACGGC 4 cut(s) 107, 272, 1158, 1163
BcnI CCSGG 1 cut(s) 609
BcoDI GTCTC 6 cut(s) 98, 263, 425, 503, 791, 868
BfaI CTAG 4 cut(s) 93, 258, 420, 1041
BfoI RGCGCY 1 cut(s) 690
BfrI CTTAAG 2 cut(s) 1103, 1289
BglII AGATCT 1 cut(s) 1380
BisI GCNGC 3 cut(s) 702, 768, 771
BlsI GCNGC 3 cut(s) 703, 769, 772
Bme1390I CCNGG 1 cut(s) 609
Bme18I GGWCC 1 cut(s) 1213
BmeRI GACNNNNNGTC 4 cut(s) 144, 309, 459, 840
BmgT120I GGNCC 1 cut(s) 1213
BmiI GGNNCC 3 cut(s) 49, 985, 1215
BmrFI CCNGG 1 cut(s) 609
BmsI GCATC 4 cut(s) 787, 1053, 1131, 1153
BpiI GAAGAC 6 cut(s) 81, 140, 246, 305, 408, 455
BplI GAGNNNNNCTC 1 cut(s) 1406
BpmI CTGGAG 2 cut(s) 649, 667
BpuEI CTTGAG 1 cut(s) 1259
BpuMI CCSGG 1 cut(s) 609
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 5 cut(s) 98, 263, 425, 791, 868
BsaJI CCNNGG 4 cut(s) 550, 748, 1127, 1276
BsaXI ACNNNNNCTCC 2 cut(s) 812, 842
Bsc4I CCNNNNNNNGG 7 cut(s) 78, 243, 405, 442, 458, 1210, 1222
BseDI CCNNGG 4 cut(s) 550, 748, 1127, 1276
BseGI GGATG 2 cut(s) 43, 1155
BseLI CCNNNNNNNGG 7 cut(s) 78, 243, 405, 442, 458, 1210, 1222
BseMII CTCAG 6 cut(s) 93, 258, 420, 588, 796, 966
BseRI GAGGAG 5 cut(s) 833, 837, 846, 849, 1358
BseSI GKGCMC 1 cut(s) 986
BseXI GCAGC 3 cut(s) 688, 779, 782
BsgI GTGCAG 1 cut(s) 786
BshFI GGCC 3 cut(s) 555, 634, 1013
BshNI GGYRCC 1 cut(s) 983
BsiHKAI GWGCWC 1 cut(s) 893
BsiSI CCGG 1 cut(s) 608
BslI CCNNNNNNNGG 7 cut(s) 78, 243, 405, 442, 458, 1210, 1222
BsmAI GTCTC 6 cut(s) 98, 263, 425, 503, 791, 868
BsmBI CGTCTC 1 cut(s) 503
BsmI GAATGC 1 cut(s) 535
BsnI GGCC 3 cut(s) 555, 634, 1013
Bso31I GGTCTC 5 cut(s) 98, 263, 425, 791, 868
Bsp1286I GDGCHC 2 cut(s) 893, 986
Bsp143I GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
BspACI CCGC 3 cut(s) 815, 837, 1420
BspANI GGCC 3 cut(s) 555, 634, 1013
BspCNI CTCAG 6 cut(s) 94, 259, 421, 589, 795, 965
BspHI TCATGA 1 cut(s) 1424
BspLI GGNNCC 3 cut(s) 49, 985, 1215
BspPI GGATC 3 cut(s) 581, 1233, 1411
BspQI GCTCTTC 1 cut(s) 898
BspT107I GGYRCC 1 cut(s) 983
BspTI CTTAAG 2 cut(s) 1103, 1289
BspTNI GGTCTC 5 cut(s) 98, 263, 425, 791, 868
BsrBI CCGCTC 1 cut(s) 1422
BssECI CCNNGG 4 cut(s) 550, 748, 1127, 1276
BssMI GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 3 cut(s) 748, 1127, 1276
Bst4CI ACNGT 4 cut(s) 142, 307, 457, 652
Bst6I CTCTTC 8 cut(s) 71, 201, 236, 242, 366, 398, 404, 898
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 2 cut(s) 1103, 1289
BstC8I GCNNGC 3 cut(s) 562, 1171, 1388
BstDEI CTNAG 6 cut(s) 102, 267, 429, 597, 782, 952
BstF5I GGATG 2 cut(s) 43, 1155
BstH2I RGCGCY 1 cut(s) 690
BstHHI GCGC 4 cut(s) 24, 159, 474, 689
BstKTI GATC 5 cut(s) 589, 1228, 1366, 1383, 1419
BstMAI GTCTC 6 cut(s) 98, 263, 425, 503, 791, 868
BstMBI GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
BstMWI GCNNNNNNNGC 9 cut(s) 176, 341, 497, 561, 693, 1063, 1175, 1291, 1383
BstSCI CCNGG 1 cut(s) 607
BstSLI GKGCMC 1 cut(s) 986
BstV1I GCAGC 3 cut(s) 688, 779, 782
BstV2I GAAGAC 6 cut(s) 81, 140, 246, 305, 408, 455
BstX2I RGATCY 3 cut(s) 1225, 1380, 1416
BstYI RGATCY 3 cut(s) 1225, 1380, 1416
BsuRI GGCC 3 cut(s) 555, 634, 1013
BtsCI GGATG 2 cut(s) 43, 1155
BtsI GCAGTG 1 cut(s) 1267
BtsIMutI CAGTG 2 cut(s) 790, 1267
Cac8I GCNNGC 3 cut(s) 562, 1171, 1388
CaiI CAGNNNCTG 1 cut(s) 1057
CciI TCATGA 1 cut(s) 1424
CfoI GCGC 4 cut(s) 24, 159, 474, 689
Cfr13I GGNCC 1 cut(s) 1213
Csp6I GTAC 2 cut(s) 648, 1077
CviAII CATG 6 cut(s) 557, 998, 1003, 1032, 1189, 1425
CviQI GTAC 2 cut(s) 648, 1077
DdeI CTNAG 6 cut(s) 102, 267, 429, 597, 782, 952
DpnI GATC 5 cut(s) 588, 1227, 1365, 1382, 1418
DpnII GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
DraI TTTAAA 1 cut(s) 1221
DriI GACNNNNNGTC 4 cut(s) 144, 309, 459, 840
EaeI YGGCCR 1 cut(s) 553
Eam1104I CTCTTC 8 cut(s) 71, 201, 236, 242, 366, 398, 404, 898
Eam1105I GACNNNNNGTC 4 cut(s) 144, 309, 459, 840
EarI CTCTTC 8 cut(s) 71, 201, 236, 242, 366, 398, 404, 898
Ecl136II GAGCTC 1 cut(s) 891
Eco130I CCWWGG 3 cut(s) 748, 1127, 1276
Eco24I GRGCYC 1 cut(s) 893
Eco31I GGTCTC 5 cut(s) 98, 263, 425, 791, 868
Eco47I GGWCC 1 cut(s) 1213
Eco47III AGCGCT 1 cut(s) 688
Eco53kI GAGCTC 1 cut(s) 891
Eco57I CTGAAG 1 cut(s) 1079
EcoICRI GAGCTC 1 cut(s) 891
EcoO109I RGGNCCY 1 cut(s) 1213
EcoRI GAATTC 1 cut(s) 1047
EcoT14I CCWWGG 3 cut(s) 748, 1127, 1276
EcoT22I ATGCAT 1 cut(s) 1146
EcoT38I GRGCYC 1 cut(s) 893
ErhI CCWWGG 3 cut(s) 748, 1127, 1276
Esp3I CGTCTC 1 cut(s) 503
FaeI CATG 6 cut(s) 560, 1001, 1006, 1035, 1192, 1428
FaiI YATR 9 cut(s) 17, 558, 914, 999, 1004, 1033, 1190, 1306, 1426
FatI CATG 6 cut(s) 556, 997, 1002, 1031, 1188, 1424
FblI GTMKAC 5 cut(s) 137, 302, 678, 1111, 1272
Fnu4HI GCNGC 3 cut(s) 702, 768, 771
FokI GGATG 2 cut(s) 50, 1162
FriOI GRGCYC 1 cut(s) 893
Fsp4HI GCNGC 3 cut(s) 702, 768, 771
FspBI CTAG 4 cut(s) 93, 258, 420, 1041
FspI TGCGCA 1 cut(s) 158
GlaI GCGC 4 cut(s) 23, 158, 473, 688
GluI GCNGC 3 cut(s) 702, 768, 771
GsuI CTGGAG 2 cut(s) 649, 667
HaeII RGCGCY 1 cut(s) 690
HaeIII GGCC 3 cut(s) 555, 634, 1013
HapII CCGG 1 cut(s) 608
HhaI GCGC 4 cut(s) 24, 159, 474, 689
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 6 cut(s) 560, 1001, 1006, 1035, 1192, 1428
Hin6I GCGC 4 cut(s) 22, 157, 472, 687
HinP1I GCGC 4 cut(s) 22, 157, 472, 687
HincII GTYRAC 3 cut(s) 138, 303, 963
HindII GTYRAC 3 cut(s) 138, 303, 963
HinfI GANTC 5 cut(s) 200, 365, 944, 1118, 1243
HpaII CCGG 1 cut(s) 608
HphI GGTGA 1 cut(s) 1424
Hpy166II GTNNAC 6 cut(s) 138, 303, 679, 963, 1112, 1273
Hpy188III TCNNGA 5 cut(s) 258, 628, 1337, 1367, 1425
Hpy8I GTNNAC 6 cut(s) 138, 303, 679, 963, 1112, 1273
Hpy99I CGWCG 2 cut(s) 10, 623
HpyAV CCTTC 3 cut(s) 436, 1367, 1403
HpyCH4III ACNGT 4 cut(s) 142, 307, 457, 652
HpyCH4IV ACGT 1 cut(s) 512
HpyCH4V TGCA 4 cut(s) 324, 535, 767, 1144
HpyF10VI GCNNNNNNNGC 9 cut(s) 176, 341, 497, 561, 693, 1063, 1175, 1291, 1383
HpyF3I CTNAG 6 cut(s) 102, 267, 429, 597, 782, 952
HpySE526I ACGT 1 cut(s) 512
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 6 cut(s) 560, 1001, 1006, 1035, 1192, 1428
HspAI GCGC 4 cut(s) 22, 157, 472, 687
Kzo9I GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
LguI GCTCTTC 1 cut(s) 898
Lsp1109I GCAGC 3 cut(s) 688, 779, 782
LweI GCATC 4 cut(s) 787, 1053, 1131, 1153
MaeI CTAG 4 cut(s) 93, 258, 420, 1041
MaeII ACGT 1 cut(s) 512
MaeIII GTNAC 1 cut(s) 1326
MalI GATC 5 cut(s) 588, 1227, 1365, 1382, 1418
MbiI CCGCTC 1 cut(s) 1422
MboI GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
MfeI CAATTG 1 cut(s) 29
MflI RGATCY 3 cut(s) 1225, 1380, 1416
MhlI GDGCHC 2 cut(s) 893, 986
MluCI AATT 7 cut(s) 29, 601, 662, 1047, 1136, 1163, 1205
MmeI TCCRAC 1 cut(s) 495
Mph1103I ATGCAT 1 cut(s) 1146
MseI TTAA 4 cut(s) 957, 1104, 1220, 1290
MslI CAYNNNNRTG 1 cut(s) 783
MspCI CTTAAG 2 cut(s) 1103, 1289
MspI CCGG 1 cut(s) 608
MspR9I CCNGG 1 cut(s) 609
MunI CAATTG 1 cut(s) 29
Mva1269I GAATGC 1 cut(s) 535
MwoI GCNNNNNNNGC 9 cut(s) 176, 341, 497, 561, 693, 1063, 1175, 1291, 1383
NciI CCSGG 1 cut(s) 609
NdeII GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
NlaIII CATG 6 cut(s) 560, 1001, 1006, 1035, 1192, 1428
NlaIV GGNNCC 3 cut(s) 49, 985, 1215
NmeAIII GCCGAG 1 cut(s) 531
NsbI TGCGCA 1 cut(s) 158
NsiI ATGCAT 1 cut(s) 1146
PagI TCATGA 1 cut(s) 1424
PciSI GCTCTTC 1 cut(s) 898
PctI GAATGC 1 cut(s) 535
PfeI GAWTC 5 cut(s) 200, 365, 944, 1118, 1243
PkrI GCNGC 3 cut(s) 703, 769, 772
PpuMI RGGWCCY 1 cut(s) 1213
Psp124BI GAGCTC 1 cut(s) 893
Psp5II RGGWCCY 1 cut(s) 1213
PspN4I GGNNCC 3 cut(s) 49, 985, 1215
PspPI GGNCC 1 cut(s) 1213
PspPPI RGGWCCY 1 cut(s) 1213
PstNI CAGNNNCTG 1 cut(s) 1057
PsuI RGATCY 3 cut(s) 1225, 1380, 1416
RsaI GTAC 2 cut(s) 649, 1078
RsaNI GTAC 2 cut(s) 648, 1077
RseI CAYNNNNRTG 1 cut(s) 783
SacI GAGCTC 1 cut(s) 893
SalI GTCGAC 2 cut(s) 136, 301
SapI GCTCTTC 1 cut(s) 898
SaqAI TTAA 4 cut(s) 957, 1104, 1220, 1290
SatI GCNGC 3 cut(s) 702, 768, 771
Sau3AI GATC 5 cut(s) 586, 1225, 1363, 1380, 1416
Sau96I GGNCC 1 cut(s) 1213
ScrFI CCNGG 1 cut(s) 609
SduI GDGCHC 2 cut(s) 893, 986
SfaNI GCATC 4 cut(s) 787, 1053, 1131, 1153
SinI GGWCC 1 cut(s) 1213
SmiMI CAYNNNNRTG 1 cut(s) 783
SmlI CTYRAG 3 cut(s) 1103, 1238, 1289
SmoI CTYRAG 3 cut(s) 1103, 1238, 1289
Sse9I AATT 7 cut(s) 29, 601, 662, 1047, 1136, 1163, 1205
SsiI CCGC 3 cut(s) 815, 837, 1420
SspMI CTAG 4 cut(s) 93, 258, 420, 1041
SstI GAGCTC 1 cut(s) 893
StyD4I CCNGG 1 cut(s) 607
StyI CCWWGG 3 cut(s) 748, 1127, 1276
TaaI ACNGT 4 cut(s) 142, 307, 457, 652
TaiI ACGT 1 cut(s) 515
TaqI TCGA 5 cut(s) 137, 219, 302, 618, 659
TasI AATT 7 cut(s) 29, 601, 662, 1047, 1136, 1163, 1205
TfiI GAWTC 5 cut(s) 200, 365, 944, 1118, 1243
Tru1I TTAA 4 cut(s) 957, 1104, 1220, 1290
Tru9I TTAA 4 cut(s) 957, 1104, 1220, 1290
TscAI CASTG 2 cut(s) 790, 1267
TseI GCWGC 3 cut(s) 701, 767, 770
TspDTI ATGAA 4 cut(s) 237, 399, 560, 983
TspGWI ACGGA 3 cut(s) 127, 454, 886
TspRI CASTG 2 cut(s) 790, 1267
Vha464I CTTAAG 2 cut(s) 1103, 1289
VpaK11BI GGWCC 1 cut(s) 1213
XapI RAATTY 2 cut(s) 601, 1047
XbaI TCTAGA 1 cut(s) 257
XmiI GTMKAC 5 cut(s) 137, 302, 678, 1111, 1272
XspI CTAG 4 cut(s) 93, 258, 420, 1041
Zsp2I ATGCAT 1 cut(s) 1146
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.