Prupe.8G050900_v2.0.a1

acetylation-dependent protein binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000736
Physical Location & Seq
Reverse (-)
5536735 .. 5543874
7140 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G050900.2

Sequence Viewer

Length: 1425 bp
ATGGCGTGGTCTGCTATAAAGCGCAGACAATTGGAGGATGGTTTTGGTTCCTTTGAGTTTGAGTTTCAGACCCAGAAGAGGATAAGGTCTTCTAGGGTTTCTGAGACCCAACGGAGTGTAGCCGTTGAGGAAAAGTCGACCGTTGGTCTTCCTCTGCGCAAGGGTTTGGCTTCGTCTGCTACAAAAAATGCCAACCCAGAATCAGAAGATCTGGGTCTTGATGAAATCTGTCAGACCCAGAAGAGGAAGAGGTCTTCTAGGGTTTCTGAGACCCAACGGAATGTAGCCGTTGAGGAAAAGTCGACTGTTGGTCTTCCTCTGTGCATGGGTTTGGCTTCGTCTGCTACAAAAAATGCCAACCCGGAATCAGAAGAGGGTTTTGATGAAATCTGTCAAACCCAGAAGAGGAAGAGGTCTTCTAGGGTTTCTAAGACCCAACGGAAGGAAAAGTCGACTGTTGGTCTTCCTCTGCGCAAAATCAAAGGTTTGGCTTCGTCTGCTTCAAAAGAGACGTTGGATTGTTCTAAGGTCTTGGATTCTCTGATGAATCTCGGCCATGCGAGCTACTTCAACAAGCCCGTTGTTGATCCTGTGGCTGAGAATCTGCCGGGTTATTTCGACGAAATCTGGAGGCCGATGGATTTGGGTACTGTGAAATCGAAATTGGAGAGGGGTGTCTACTCCAGCGCTGCTGACTTTGCTGCTGATATCAGGCTTATCTTCTCAAACGCTTTCAGATATTTCCCCCTTGGGAGTAGAAATCGTGCAGCAGCCAAGCATCTCAGTGGGGTTTTTGAGACCCAATGGAAAGAAGCCGAGGAGAAAATGTCAAATGCTTGTCCTCCTCCTACTCCTCCTCTGCCCGAACGGAGACCAAATGGCAAGAGCTCTTCTGCTTGTACGGTTCTTATGCAAAATCAAGGGGTTGTTGGGGTTTCTGATTCTCACTCAGTTAAGTCAACCAAAGATGACGACTTGGGCACCCTTGTTCATCAAGCCATGTATCAGGCCACAGACAATCTTTCTCCATGTAAGGCTAGGCGAATTCAGTCGCTCAAGATGCGATTTTCAGGTACAATACGGAAAGCAAACAAGATACTAAAGGGTCTACCTGATTCTCCACCAAGGAGAAAATTGATGCATCGGATGGAGCAAAGGGAAACGGCTCGCCTTGCTATTTTGAACATGGAGAAGTCAGTCCAATTTGAGGACCCTTTAAAGGATCTCAAACAACTTGAGATTCTGTGTGGCTGTGGCAGTGAAAAGGTCTACCTTGGATTGCCTCTTAAGCATTTGGGTTTGTACCTCAAGGAAGATGACGAGTTGCAGGGTCAGGACGAGGAGGCGTTTCTGAATGGAGATTGGGAGGAAGGCGAGATCTGCTGGCAGGAAGGCGATTGGGAGGAAGGTGAGATCCGCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BET Bromodomain

Protein Analysis

475

Amino Acids

53.01

Weight (kDa)

8.65

Isoelectric Point (pI)

57.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 158, 473
AccB1I GGYRCC 1 cut(s) 980
AccBSI CCGCTC 1 cut(s) 1419
AccI GTMKAC 6 cut(s) 137, 302, 452, 678, 1108, 1269
AciI CCGC 1 cut(s) 1417
AclWI GGATC 3 cut(s) 581, 1230, 1408
AcoI YGGCCR 1 cut(s) 553
AcsI RAATTY 1 cut(s) 1044
AfaI GTAC 4 cut(s) 649, 901, 1075, 1304
AfeI AGCGCT 1 cut(s) 688
AfiI CCNNNNNNNGG 6 cut(s) 78, 243, 405, 442, 1207, 1219
AflII CTTAAG 1 cut(s) 1286
AgsI TTSAA 3 cut(s) 504, 571, 1183
AhdI GACNNNNNGTC 3 cut(s) 144, 309, 459
AjuI GAANNNNNNNTTGG 2 cut(s) 647, 679
AluBI AGCT 2 cut(s) 564, 888
AluI AGCT 2 cut(s) 564, 888
Alw21I GWGCWC 1 cut(s) 890
Alw26I GTCTC 5 cut(s) 98, 263, 503, 791, 865
AlwI GGATC 3 cut(s) 581, 1230, 1408
Aor51HI AGCGCT 1 cut(s) 688
AoxI GGCC 3 cut(s) 553, 632, 1008
ApeKI GCWGC 4 cut(s) 689, 701, 767, 770
ApoI RAATTY 1 cut(s) 1044
AspLEI GCGC 4 cut(s) 24, 159, 474, 689
AspS9I GGNCC 1 cut(s) 1210
AsuC2I CCSGG 2 cut(s) 362, 609
AsuHPI GGTGA 1 cut(s) 1421
AvaII GGWCC 1 cut(s) 1210
BaeGI GKGCMC 1 cut(s) 983
BanI GGYRCC 1 cut(s) 980
BanII GRGCYC 1 cut(s) 890
BbsI GAAGAC 6 cut(s) 81, 140, 246, 305, 408, 455
Bbv12I GWGCWC 1 cut(s) 890
BbvI GCAGC 4 cut(s) 676, 688, 779, 782
BccI CCATC 3 cut(s) 32, 631, 1141
BceAI ACGGC 3 cut(s) 107, 272, 1179
BcnI CCSGG 2 cut(s) 362, 609
BcoDI GTCTC 5 cut(s) 98, 263, 503, 791, 865
BfaI CTAG 4 cut(s) 93, 258, 420, 1038
BfoI RGCGCY 1 cut(s) 690
BfrI CTTAAG 1 cut(s) 1286
BglII AGATCT 2 cut(s) 208, 1377
BisI GCNGC 4 cut(s) 690, 702, 768, 771
BlsI GCNGC 4 cut(s) 691, 703, 769, 772
Bme1390I CCNGG 2 cut(s) 362, 609
Bme18I GGWCC 1 cut(s) 1210
BmeRI GACNNNNNGTC 3 cut(s) 144, 309, 459
BmgT120I GGNCC 1 cut(s) 1210
BmiI GGNNCC 3 cut(s) 49, 982, 1212
BmrFI CCNGG 2 cut(s) 362, 609
BmsI GCATC 4 cut(s) 787, 1050, 1128, 1150
BpiI GAAGAC 6 cut(s) 81, 140, 246, 305, 408, 455
BplI GAGNNNNNCTC 1 cut(s) 1403
BpmI CTGGAG 2 cut(s) 649, 667
BpuEI CTTGAG 3 cut(s) 1040, 1256, 1292
BpuMI CCSGG 2 cut(s) 362, 609
BsaI GGTCTC 4 cut(s) 98, 263, 791, 865
BsaJI CCNNGG 4 cut(s) 748, 816, 1124, 1273
BsaXI ACNNNNNCTCC 2 cut(s) 812, 842
Bsc4I CCNNNNNNNGG 6 cut(s) 78, 243, 405, 442, 1207, 1219
BseDI CCNNGG 4 cut(s) 748, 816, 1124, 1273
BseGI GGATG 2 cut(s) 43, 1152
BseLI CCNNNNNNNGG 6 cut(s) 78, 243, 405, 442, 1207, 1219
BseMII CTCAG 5 cut(s) 93, 258, 588, 796, 963
BseRI GAGGAG 5 cut(s) 833, 834, 843, 846, 1355
BseSI GKGCMC 1 cut(s) 983
BseXI GCAGC 4 cut(s) 676, 688, 779, 782
BsgI GTGCAG 1 cut(s) 786
Bsh1285I CGRYCG 1 cut(s) 141
BshFI GGCC 3 cut(s) 555, 634, 1010
BshNI GGYRCC 1 cut(s) 980
BsiEI CGRYCG 1 cut(s) 141
BsiHKAI GWGCWC 1 cut(s) 890
BsiSI CCGG 2 cut(s) 362, 608
BslI CCNNNNNNNGG 6 cut(s) 78, 243, 405, 442, 1207, 1219
BsmAI GTCTC 5 cut(s) 98, 263, 503, 791, 865
BsmBI CGTCTC 1 cut(s) 503
BsnI GGCC 3 cut(s) 555, 634, 1010
Bso31I GGTCTC 4 cut(s) 98, 263, 791, 865
Bsp1286I GDGCHC 2 cut(s) 890, 983
Bsp143I GATC 5 cut(s) 208, 586, 1222, 1377, 1413
BspACI CCGC 1 cut(s) 1417
BspANI GGCC 3 cut(s) 555, 634, 1010
BspCNI CTCAG 5 cut(s) 94, 259, 589, 795, 962
BspHI TCATGA 1 cut(s) 1421
BspLI GGNNCC 3 cut(s) 49, 982, 1212
BspPI GGATC 3 cut(s) 581, 1230, 1408
BspQI GCTCTTC 1 cut(s) 895
BspT107I GGYRCC 1 cut(s) 980
BspTI CTTAAG 1 cut(s) 1286
BspTNI GGTCTC 4 cut(s) 98, 263, 791, 865
BsrBI CCGCTC 1 cut(s) 1419
BssECI CCNNGG 4 cut(s) 748, 816, 1124, 1273
BssMI GATC 5 cut(s) 208, 586, 1222, 1377, 1413
BssT1I CCWWGG 3 cut(s) 748, 1124, 1273
Bst4CI ACNGT 5 cut(s) 142, 307, 457, 652, 904
Bst6I CTCTTC 7 cut(s) 71, 236, 242, 366, 398, 404, 895
BstAFI CTTAAG 1 cut(s) 1286
BstC8I GCNNGC 3 cut(s) 562, 1168, 1385
BstDEI CTNAG 7 cut(s) 102, 267, 429, 525, 597, 782, 949
BstF5I GGATG 2 cut(s) 43, 1152
BstH2I RGCGCY 1 cut(s) 690
BstHHI GCGC 4 cut(s) 24, 159, 474, 689
BstKTI GATC 5 cut(s) 211, 589, 1225, 1380, 1416
BstMAI GTCTC 5 cut(s) 98, 263, 503, 791, 865
BstMBI GATC 5 cut(s) 208, 586, 1222, 1377, 1413
BstMCI CGRYCG 1 cut(s) 141
BstSCI CCNGG 2 cut(s) 360, 607
BstSLI GKGCMC 1 cut(s) 983
BstV1I GCAGC 4 cut(s) 676, 688, 779, 782
BstV2I GAAGAC 6 cut(s) 81, 140, 246, 305, 408, 455
BstX2I RGATCY 4 cut(s) 208, 1222, 1377, 1413
BstYI RGATCY 4 cut(s) 208, 1222, 1377, 1413
BsuRI GGCC 3 cut(s) 555, 634, 1010
BtsCI GGATG 2 cut(s) 43, 1152
BtsI GCAGTG 1 cut(s) 1264
BtsIMutI CAGTG 2 cut(s) 790, 1264
Cac8I GCNNGC 3 cut(s) 562, 1168, 1385
CciI TCATGA 1 cut(s) 1421
CfoI GCGC 4 cut(s) 24, 159, 474, 689
Cfr13I GGNCC 1 cut(s) 1210
Csp6I GTAC 4 cut(s) 648, 900, 1074, 1303
CviAII CATG 6 cut(s) 325, 557, 1000, 1029, 1186, 1422
CviQI GTAC 4 cut(s) 648, 900, 1074, 1303
DdeI CTNAG 7 cut(s) 102, 267, 429, 525, 597, 782, 949
DpnI GATC 5 cut(s) 210, 588, 1224, 1379, 1415
DpnII GATC 5 cut(s) 208, 586, 1222, 1377, 1413
DraI TTTAAA 1 cut(s) 1218
DriI GACNNNNNGTC 3 cut(s) 144, 309, 459
EaeI YGGCCR 1 cut(s) 553
Eam1104I CTCTTC 7 cut(s) 71, 236, 242, 366, 398, 404, 895
Eam1105I GACNNNNNGTC 3 cut(s) 144, 309, 459
EarI CTCTTC 7 cut(s) 71, 236, 242, 366, 398, 404, 895
Ecl136II GAGCTC 1 cut(s) 888
Eco130I CCWWGG 3 cut(s) 748, 1124, 1273
Eco24I GRGCYC 1 cut(s) 890
Eco31I GGTCTC 4 cut(s) 98, 263, 791, 865
Eco32I GATATC 1 cut(s) 709
Eco47I GGWCC 1 cut(s) 1210
Eco47III AGCGCT 1 cut(s) 688
Eco53kI GAGCTC 1 cut(s) 888
EcoICRI GAGCTC 1 cut(s) 888
EcoO109I RGGNCCY 1 cut(s) 1210
EcoRI GAATTC 1 cut(s) 1044
EcoRV GATATC 1 cut(s) 709
EcoT14I CCWWGG 3 cut(s) 748, 1124, 1273
EcoT22I ATGCAT 1 cut(s) 1143
EcoT38I GRGCYC 1 cut(s) 890
ErhI CCWWGG 3 cut(s) 748, 1124, 1273
Esp3I CGTCTC 1 cut(s) 503
FaeI CATG 6 cut(s) 328, 560, 1003, 1032, 1189, 1425
FaiI YATR 8 cut(s) 17, 326, 558, 911, 1001, 1030, 1187, 1423
FatI CATG 6 cut(s) 324, 556, 999, 1028, 1185, 1421
FblI GTMKAC 6 cut(s) 137, 302, 452, 678, 1108, 1269
Fnu4HI GCNGC 4 cut(s) 690, 702, 768, 771
FokI GGATG 2 cut(s) 50, 1159
FriOI GRGCYC 1 cut(s) 890
Fsp4HI GCNGC 4 cut(s) 690, 702, 768, 771
FspBI CTAG 4 cut(s) 93, 258, 420, 1038
FspI TGCGCA 2 cut(s) 158, 473
GlaI GCGC 4 cut(s) 23, 158, 473, 688
GluI GCNGC 4 cut(s) 690, 702, 768, 771
GsuI CTGGAG 2 cut(s) 649, 667
HaeII RGCGCY 1 cut(s) 690
HaeIII GGCC 3 cut(s) 555, 634, 1010
HapII CCGG 2 cut(s) 362, 608
HhaI GCGC 4 cut(s) 24, 159, 474, 689
Hin1II CATG 6 cut(s) 328, 560, 1003, 1032, 1189, 1425
Hin6I GCGC 4 cut(s) 22, 157, 472, 687
HinP1I GCGC 4 cut(s) 22, 157, 472, 687
HincII GTYRAC 4 cut(s) 138, 303, 453, 960
HindII GTYRAC 4 cut(s) 138, 303, 453, 960
HinfI GANTC 8 cut(s) 200, 365, 536, 547, 601, 941, 1115, 1240
HpaII CCGG 2 cut(s) 362, 608
HphI GGTGA 1 cut(s) 1421
Hpy166II GTNNAC 7 cut(s) 138, 303, 453, 679, 960, 1109, 1270
Hpy188III TCNNGA 5 cut(s) 218, 628, 1057, 1334, 1422
Hpy8I GTNNAC 7 cut(s) 138, 303, 453, 679, 960, 1109, 1270
Hpy99I CGWCG 1 cut(s) 623
HpyAV CCTTC 4 cut(s) 436, 1364, 1385, 1400
HpyCH4III ACNGT 5 cut(s) 142, 307, 457, 652, 904
HpyCH4IV ACGT 1 cut(s) 512
HpyCH4V TGCA 5 cut(s) 324, 767, 913, 1141, 1327
HpyF3I CTNAG 7 cut(s) 102, 267, 429, 525, 597, 782, 949
HpySE526I ACGT 1 cut(s) 512
Hsp92II CATG 6 cut(s) 328, 560, 1003, 1032, 1189, 1425
HspAI GCGC 4 cut(s) 22, 157, 472, 687
Kzo9I GATC 5 cut(s) 208, 586, 1222, 1377, 1413
LguI GCTCTTC 1 cut(s) 895
LmnI GCTCC 1 cut(s) 1150
Lsp1109I GCAGC 4 cut(s) 676, 688, 779, 782
LweI GCATC 4 cut(s) 787, 1050, 1128, 1150
MaeI CTAG 4 cut(s) 93, 258, 420, 1038
MaeII ACGT 1 cut(s) 512
MalI GATC 5 cut(s) 210, 588, 1224, 1379, 1415
MbiI CCGCTC 1 cut(s) 1419
MboI GATC 5 cut(s) 208, 586, 1222, 1377, 1413
MfeI CAATTG 1 cut(s) 29
MflI RGATCY 4 cut(s) 208, 1222, 1377, 1413
MhlI GDGCHC 2 cut(s) 890, 983
MluCI AATT 5 cut(s) 29, 662, 1044, 1133, 1202
MmeI TCCRAC 1 cut(s) 495
Mph1103I ATGCAT 1 cut(s) 1143
MseI TTAA 3 cut(s) 954, 1217, 1287
MslI CAYNNNNRTG 1 cut(s) 783
MspCI CTTAAG 1 cut(s) 1286
MspI CCGG 2 cut(s) 362, 608
MspR9I CCNGG 2 cut(s) 362, 609
MunI CAATTG 1 cut(s) 29
NciI CCSGG 2 cut(s) 362, 609
NdeII GATC 5 cut(s) 208, 586, 1222, 1377, 1413
NlaIII CATG 6 cut(s) 328, 560, 1003, 1032, 1189, 1425
NlaIV GGNNCC 3 cut(s) 49, 982, 1212
NmeAIII GCCGAG 2 cut(s) 531, 841
NsbI TGCGCA 2 cut(s) 158, 473
NsiI ATGCAT 1 cut(s) 1143
PagI TCATGA 1 cut(s) 1421
PciSI GCTCTTC 1 cut(s) 895
PfeI GAWTC 8 cut(s) 200, 365, 536, 547, 601, 941, 1115, 1240
PkrI GCNGC 4 cut(s) 691, 703, 769, 772
PpuMI RGGWCCY 1 cut(s) 1210
Psp124BI GAGCTC 1 cut(s) 890
Psp5II RGGWCCY 1 cut(s) 1210
PspN4I GGNNCC 3 cut(s) 49, 982, 1212
PspPI GGNCC 1 cut(s) 1210
PspPPI RGGWCCY 1 cut(s) 1210
PsuI RGATCY 4 cut(s) 208, 1222, 1377, 1413
RsaI GTAC 4 cut(s) 649, 901, 1075, 1304
RsaNI GTAC 4 cut(s) 648, 900, 1074, 1303
RseI CAYNNNNRTG 1 cut(s) 783
SacI GAGCTC 1 cut(s) 890
SalI GTCGAC 3 cut(s) 136, 301, 451
SapI GCTCTTC 1 cut(s) 895
SaqAI TTAA 3 cut(s) 954, 1217, 1287
SatI GCNGC 4 cut(s) 690, 702, 768, 771
Sau3AI GATC 5 cut(s) 208, 586, 1222, 1377, 1413
Sau96I GGNCC 1 cut(s) 1210
ScrFI CCNGG 2 cut(s) 362, 609
SduI GDGCHC 2 cut(s) 890, 983
SfaNI GCATC 4 cut(s) 787, 1050, 1128, 1150
SinI GGWCC 1 cut(s) 1210
SmiMI CAYNNNNRTG 1 cut(s) 783
SmlI CTYRAG 4 cut(s) 1055, 1235, 1286, 1307
SmoI CTYRAG 4 cut(s) 1055, 1235, 1286, 1307
Sse9I AATT 5 cut(s) 29, 662, 1044, 1133, 1202
SsiI CCGC 1 cut(s) 1417
SspMI CTAG 4 cut(s) 93, 258, 420, 1038
SstI GAGCTC 1 cut(s) 890
StyD4I CCNGG 2 cut(s) 360, 607
StyI CCWWGG 3 cut(s) 748, 1124, 1273
TaaI ACNGT 5 cut(s) 142, 307, 457, 652, 904
TaiI ACGT 1 cut(s) 515
TaqI TCGA 5 cut(s) 137, 302, 452, 618, 659
TasI AATT 5 cut(s) 29, 662, 1044, 1133, 1202
TfiI GAWTC 8 cut(s) 200, 365, 536, 547, 601, 941, 1115, 1240
Tru1I TTAA 3 cut(s) 954, 1217, 1287
Tru9I TTAA 3 cut(s) 954, 1217, 1287
TscAI CASTG 2 cut(s) 790, 1264
TseI GCWGC 4 cut(s) 689, 701, 767, 770
TspDTI ATGAA 4 cut(s) 237, 399, 560, 980
TspGWI ACGGA 5 cut(s) 127, 292, 454, 883, 1096
TspRI CASTG 2 cut(s) 790, 1264
Vha464I CTTAAG 1 cut(s) 1286
VpaK11BI GGWCC 1 cut(s) 1210
XapI RAATTY 1 cut(s) 1044
XmiI GTMKAC 6 cut(s) 137, 302, 452, 678, 1108, 1269
XspI CTAG 4 cut(s) 93, 258, 420, 1038
Zsp2I ATGCAT 1 cut(s) 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.