Prupe.8G051100_v2.0.a1

Transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
5571349 .. 5578996
7648 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G051100.2

Sequence Viewer

Length: 1587 bp
ATGGCGTGGTCTGCTATAAAGCGCAGACAATTGGAGGATGGTTTTGGTTCCTTTGAGTTTCAGTTTCAGACCCAGAAGAGGATAAGGTCTTCTAGGGTTTCTGAGACCCAACGGAATGTAGCCGTTGAGGAAAAGTCGACCGTTGGTCTTCCTCTGCGCAAGGGTTTGGCTTCGTCTGCTACAAAAAATGCCAACCCAGAATCAGAAGATCTGGGTTTTGATGAAATCTGTCAGACCCAGAAGAGGAAGAGGTCTTCTAGGGTTTCTGAGACCCAACGGAATGTAGCCGTTGAGGAAAACTCGACTGTTGGTCTTCCTCTGTGCATGGGTTTGGCTTCGTCTGCTACAAAAAATGCCAACCCGGAATCAGAAGAGGGTTTTGATAAAATCTGTCAAACCCAGAAGAGGAAAAGGTCTTCTGGGGTTTCTGAGACCCAACGGAATGTAGCCGTTGAGGAAAAGTCGACCGTTGGTCTTCCTCTGCGCAAGGGTTTGGCTTCGTCTGCTAAAAAAAATGCCAACCCGGAATCAGAAGAGGGTTTTGATGAAATCTGTCAAACCCAGAAGAGGAAGAGGTCTTCTAGGGTTTCTAAGACCCAACGGAAGGAAAAGTCGACTGTTGGTCTTCCTCTGCGCAGAATCAAAGGTTTGGCTTCGTCTGCTTCAAAAGAGACGTTGGATTGTTCTAAGGTCTTGGATTCTCTGATGAACCTCGGCCATGCGAGCTACTTCAACAAGCCTGTTGTTGATCCTGTGGCTGAGAATCTGCCGGGTTATTTCGACGAAATCTGGAGGCCGATGGATTTGGGTACTGTGAAATCGAAATTGGAGAGGGGTGTCTACTCCAGCGCTGCTGACTTTGCTGCTGATATCAGGCTTATCTTCTCAAACGCTTTCAGATATTTCCCCCTTGGGAGTAGAAATCGTGCAGCAGCCAAGCATCTCAGTGGGGTTTTTGAGACCCAATGGAAAGAAGCCGAGGAGAAAATGTCAAATGCTTGTCCTCCTCCTACTCCTCCTCTGCCCGAACGGAGACCAAATGGCAAGAGCTCTTCTGCTTGTACGGTTCTTATGCAAAGTCAAGGGGTTGTTGGGGTTTCTGATTCTCACTCAGTTAAGTCAACCAAAGATGACGACTTGGGCACCCTTGTTCATCAAGCCATGTATCAGGCCACAGACAATCTTTCTCCATGTAAGGCTAGGCGAATTCAGTCGCTCAAGATGCGATTTTCAGGTACAATACGGAAAGCAAACAAGATACTAAAGGGTCTACCTGATTCTCCACCAAGGAGAAAATTGATGCATCGGATGGAGCAAAGGGAAACGGCTCGCCTTGCTATTTTGAACATGGAGAAGTCAGTCCAATTTGAGGACCCTTTAAAGGATCTCAAACAACTTGAGATTCTGTGTGGCTGTGGCAGTGAAAAGGTCTACCTTGGATTGCCTCTTAAGCATTTGGGTTTGTACCTCAAGGAAGATGACGAGTTGCAGGGTCAGGACGAGGAGGCGTTTCTGAATGGAGATTGGGAGGAAGGCGAGATCTGCTGGCAGGAAGGCGATTGGGAGGAAGGTGAGATCCGCTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

529

Amino Acids

58.92

Weight (kDa)

8.93

Isoelectric Point (pI)

60.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 3 cut(s) 158, 485, 635
AccB1I GGYRCC 1 cut(s) 1142
AccBSI CCGCTC 1 cut(s) 1581
AccI GTMKAC 6 cut(s) 137, 464, 614, 840, 1270, 1431
AciI CCGC 1 cut(s) 1579
AclWI GGATC 3 cut(s) 743, 1392, 1570
AcoI YGGCCR 1 cut(s) 715
AcsI RAATTY 1 cut(s) 1206
AfaI GTAC 4 cut(s) 811, 1063, 1237, 1466
AfeI AGCGCT 1 cut(s) 850
AfiI CCNNNNNNNGG 7 cut(s) 78, 243, 405, 567, 604, 1369, 1381
AflII CTTAAG 1 cut(s) 1448
AgsI TTSAA 3 cut(s) 666, 733, 1345
AhdI GACNNNNNGTC 4 cut(s) 144, 309, 471, 621
AjuI GAANNNNNNNTTGG 2 cut(s) 809, 841
AluBI AGCT 2 cut(s) 726, 1050
AluI AGCT 2 cut(s) 726, 1050
Alw21I GWGCWC 1 cut(s) 1052
Alw26I GTCTC 6 cut(s) 98, 263, 425, 665, 953, 1027
AlwI GGATC 3 cut(s) 743, 1392, 1570
Aor51HI AGCGCT 1 cut(s) 850
AoxI GGCC 3 cut(s) 715, 794, 1170
ApeKI GCWGC 4 cut(s) 851, 863, 929, 932
ApoI RAATTY 1 cut(s) 1206
AspLEI GCGC 5 cut(s) 24, 159, 486, 636, 851
AspS9I GGNCC 1 cut(s) 1372
AsuC2I CCSGG 3 cut(s) 362, 524, 771
AsuHPI GGTGA 1 cut(s) 1583
AvaII GGWCC 1 cut(s) 1372
BaeGI GKGCMC 1 cut(s) 1145
BanI GGYRCC 1 cut(s) 1142
BanII GRGCYC 1 cut(s) 1052
BbsI GAAGAC 8 cut(s) 81, 140, 246, 305, 408, 467, 570, 617
Bbv12I GWGCWC 1 cut(s) 1052
BbvI GCAGC 4 cut(s) 838, 850, 941, 944
BccI CCATC 3 cut(s) 32, 793, 1303
BceAI ACGGC 4 cut(s) 107, 272, 434, 1341
BcnI CCSGG 3 cut(s) 362, 524, 771
BcoDI GTCTC 6 cut(s) 98, 263, 425, 665, 953, 1027
BfaI CTAG 4 cut(s) 93, 258, 582, 1200
BfoI RGCGCY 1 cut(s) 852
BfrI CTTAAG 1 cut(s) 1448
BglII AGATCT 2 cut(s) 208, 1539
BisI GCNGC 4 cut(s) 852, 864, 930, 933
BlsI GCNGC 4 cut(s) 853, 865, 931, 934
Bme1390I CCNGG 3 cut(s) 362, 524, 771
Bme18I GGWCC 1 cut(s) 1372
BmeRI GACNNNNNGTC 4 cut(s) 144, 309, 471, 621
BmgT120I GGNCC 1 cut(s) 1372
BmiI GGNNCC 3 cut(s) 49, 1144, 1374
BmrFI CCNGG 3 cut(s) 362, 524, 771
BmsI GCATC 4 cut(s) 949, 1212, 1290, 1312
BpiI GAAGAC 8 cut(s) 81, 140, 246, 305, 408, 467, 570, 617
BplI GAGNNNNNCTC 3 cut(s) 284, 316, 1565
BpmI CTGGAG 2 cut(s) 811, 829
BpuEI CTTGAG 3 cut(s) 1202, 1418, 1454
BpuMI CCSGG 3 cut(s) 362, 524, 771
BsaI GGTCTC 5 cut(s) 98, 263, 425, 953, 1027
BsaJI CCNNGG 5 cut(s) 712, 910, 978, 1286, 1435
BsaXI ACNNNNNCTCC 2 cut(s) 974, 1004
Bsc4I CCNNNNNNNGG 7 cut(s) 78, 243, 405, 567, 604, 1369, 1381
BseDI CCNNGG 5 cut(s) 712, 910, 978, 1286, 1435
BseGI GGATG 2 cut(s) 43, 1314
BseLI CCNNNNNNNGG 7 cut(s) 78, 243, 405, 567, 604, 1369, 1381
BseMII CTCAG 6 cut(s) 93, 258, 420, 750, 958, 1125
BseRI GAGGAG 5 cut(s) 995, 996, 1005, 1008, 1517
BseSI GKGCMC 1 cut(s) 1145
BseXI GCAGC 4 cut(s) 838, 850, 941, 944
BsgI GTGCAG 1 cut(s) 948
Bsh1285I CGRYCG 2 cut(s) 141, 468
BshFI GGCC 3 cut(s) 717, 796, 1172
BshNI GGYRCC 1 cut(s) 1142
BsiEI CGRYCG 2 cut(s) 141, 468
BsiHKAI GWGCWC 1 cut(s) 1052
BsiSI CCGG 3 cut(s) 362, 524, 770
BslI CCNNNNNNNGG 7 cut(s) 78, 243, 405, 567, 604, 1369, 1381
BsmAI GTCTC 6 cut(s) 98, 263, 425, 665, 953, 1027
BsmBI CGTCTC 1 cut(s) 665
BsnI GGCC 3 cut(s) 717, 796, 1172
Bso31I GGTCTC 5 cut(s) 98, 263, 425, 953, 1027
Bsp1286I GDGCHC 2 cut(s) 1052, 1145
Bsp143I GATC 5 cut(s) 208, 748, 1384, 1539, 1575
BspACI CCGC 1 cut(s) 1579
BspANI GGCC 3 cut(s) 717, 796, 1172
BspCNI CTCAG 6 cut(s) 94, 259, 421, 751, 957, 1124
BspHI TCATGA 1 cut(s) 1583
BspLI GGNNCC 3 cut(s) 49, 1144, 1374
BspPI GGATC 3 cut(s) 743, 1392, 1570
BspQI GCTCTTC 1 cut(s) 1057
BspT107I GGYRCC 1 cut(s) 1142
BspTI CTTAAG 1 cut(s) 1448
BspTNI GGTCTC 5 cut(s) 98, 263, 425, 953, 1027
BsrBI CCGCTC 1 cut(s) 1581
BssECI CCNNGG 5 cut(s) 712, 910, 978, 1286, 1435
BssMI GATC 5 cut(s) 208, 748, 1384, 1539, 1575
BssT1I CCWWGG 3 cut(s) 910, 1286, 1435
Bst4CI ACNGT 6 cut(s) 142, 307, 469, 619, 814, 1066
Bst6I CTCTTC 9 cut(s) 71, 236, 242, 366, 398, 528, 560, 566, 1057
BstAFI CTTAAG 1 cut(s) 1448
BstC8I GCNNGC 3 cut(s) 724, 1330, 1547
BstDEI CTNAG 8 cut(s) 102, 267, 429, 591, 687, 759, 944, 1111
BstF5I GGATG 2 cut(s) 43, 1314
BstH2I RGCGCY 1 cut(s) 852
BstHHI GCGC 5 cut(s) 24, 159, 486, 636, 851
BstKTI GATC 5 cut(s) 211, 751, 1387, 1542, 1578
BstMAI GTCTC 6 cut(s) 98, 263, 425, 665, 953, 1027
BstMBI GATC 5 cut(s) 208, 748, 1384, 1539, 1575
BstMCI CGRYCG 2 cut(s) 141, 468
BstSCI CCNGG 3 cut(s) 360, 522, 769
BstSLI GKGCMC 1 cut(s) 1145
BstV1I GCAGC 4 cut(s) 838, 850, 941, 944
BstV2I GAAGAC 8 cut(s) 81, 140, 246, 305, 408, 467, 570, 617
BstX2I RGATCY 4 cut(s) 208, 1384, 1539, 1575
BstYI RGATCY 4 cut(s) 208, 1384, 1539, 1575
BsuRI GGCC 3 cut(s) 717, 796, 1172
BtsCI GGATG 2 cut(s) 43, 1314
BtsI GCAGTG 1 cut(s) 1426
BtsIMutI CAGTG 2 cut(s) 952, 1426
Cac8I GCNNGC 3 cut(s) 724, 1330, 1547
CciI TCATGA 1 cut(s) 1583
CfoI GCGC 5 cut(s) 24, 159, 486, 636, 851
Cfr13I GGNCC 1 cut(s) 1372
Csp6I GTAC 4 cut(s) 810, 1062, 1236, 1465
CviAII CATG 6 cut(s) 325, 719, 1162, 1191, 1348, 1584
CviQI GTAC 4 cut(s) 810, 1062, 1236, 1465
DdeI CTNAG 8 cut(s) 102, 267, 429, 591, 687, 759, 944, 1111
DpnI GATC 5 cut(s) 210, 750, 1386, 1541, 1577
DpnII GATC 5 cut(s) 208, 748, 1384, 1539, 1575
DraI TTTAAA 1 cut(s) 1380
DriI GACNNNNNGTC 4 cut(s) 144, 309, 471, 621
EaeI YGGCCR 1 cut(s) 715
Eam1104I CTCTTC 9 cut(s) 71, 236, 242, 366, 398, 528, 560, 566, 1057
Eam1105I GACNNNNNGTC 4 cut(s) 144, 309, 471, 621
EarI CTCTTC 9 cut(s) 71, 236, 242, 366, 398, 528, 560, 566, 1057
Ecl136II GAGCTC 1 cut(s) 1050
Eco130I CCWWGG 3 cut(s) 910, 1286, 1435
Eco24I GRGCYC 1 cut(s) 1052
Eco31I GGTCTC 5 cut(s) 98, 263, 425, 953, 1027
Eco32I GATATC 1 cut(s) 871
Eco47I GGWCC 1 cut(s) 1372
Eco47III AGCGCT 1 cut(s) 850
Eco53kI GAGCTC 1 cut(s) 1050
EcoICRI GAGCTC 1 cut(s) 1050
EcoO109I RGGNCCY 1 cut(s) 1372
EcoRI GAATTC 1 cut(s) 1206
EcoRV GATATC 1 cut(s) 871
EcoT14I CCWWGG 3 cut(s) 910, 1286, 1435
EcoT22I ATGCAT 1 cut(s) 1305
EcoT38I GRGCYC 1 cut(s) 1052
ErhI CCWWGG 3 cut(s) 910, 1286, 1435
Esp3I CGTCTC 1 cut(s) 665
FaeI CATG 6 cut(s) 328, 722, 1165, 1194, 1351, 1587
FaiI YATR 8 cut(s) 17, 326, 720, 1073, 1163, 1192, 1349, 1585
FatI CATG 6 cut(s) 324, 718, 1161, 1190, 1347, 1583
FblI GTMKAC 6 cut(s) 137, 464, 614, 840, 1270, 1431
Fnu4HI GCNGC 4 cut(s) 852, 864, 930, 933
FokI GGATG 2 cut(s) 50, 1321
FriOI GRGCYC 1 cut(s) 1052
Fsp4HI GCNGC 4 cut(s) 852, 864, 930, 933
FspBI CTAG 4 cut(s) 93, 258, 582, 1200
FspI TGCGCA 3 cut(s) 158, 485, 635
GlaI GCGC 5 cut(s) 23, 158, 485, 635, 850
GluI GCNGC 4 cut(s) 852, 864, 930, 933
GsuI CTGGAG 2 cut(s) 811, 829
HaeII RGCGCY 1 cut(s) 852
HaeIII GGCC 3 cut(s) 717, 796, 1172
HapII CCGG 3 cut(s) 362, 524, 770
HhaI GCGC 5 cut(s) 24, 159, 486, 636, 851
Hin1II CATG 6 cut(s) 328, 722, 1165, 1194, 1351, 1587
Hin6I GCGC 5 cut(s) 22, 157, 484, 634, 849
HinP1I GCGC 5 cut(s) 22, 157, 484, 634, 849
HincII GTYRAC 4 cut(s) 138, 465, 615, 1122
HindII GTYRAC 4 cut(s) 138, 465, 615, 1122
HinfI GANTC 9 cut(s) 200, 365, 527, 639, 698, 763, 1103, 1277, 1402
HpaII CCGG 3 cut(s) 362, 524, 770
HphI GGTGA 1 cut(s) 1583
Hpy166II GTNNAC 7 cut(s) 138, 465, 615, 841, 1122, 1271, 1432
Hpy188III TCNNGA 4 cut(s) 790, 1219, 1496, 1584
Hpy8I GTNNAC 7 cut(s) 138, 465, 615, 841, 1122, 1271, 1432
Hpy99I CGWCG 1 cut(s) 785
HpyAV CCTTC 4 cut(s) 598, 1526, 1547, 1562
HpyCH4III ACNGT 6 cut(s) 142, 307, 469, 619, 814, 1066
HpyCH4IV ACGT 1 cut(s) 674
HpyCH4V TGCA 5 cut(s) 324, 929, 1075, 1303, 1489
HpyF3I CTNAG 8 cut(s) 102, 267, 429, 591, 687, 759, 944, 1111
HpySE526I ACGT 1 cut(s) 674
Hsp92II CATG 6 cut(s) 328, 722, 1165, 1194, 1351, 1587
HspAI GCGC 5 cut(s) 22, 157, 484, 634, 849
Kzo9I GATC 5 cut(s) 208, 748, 1384, 1539, 1575
LguI GCTCTTC 1 cut(s) 1057
LmnI GCTCC 1 cut(s) 1312
Lsp1109I GCAGC 4 cut(s) 838, 850, 941, 944
LweI GCATC 4 cut(s) 949, 1212, 1290, 1312
MaeI CTAG 4 cut(s) 93, 258, 582, 1200
MaeII ACGT 1 cut(s) 674
MalI GATC 5 cut(s) 210, 750, 1386, 1541, 1577
MbiI CCGCTC 1 cut(s) 1581
MboI GATC 5 cut(s) 208, 748, 1384, 1539, 1575
MfeI CAATTG 1 cut(s) 29
MflI RGATCY 4 cut(s) 208, 1384, 1539, 1575
MhlI GDGCHC 2 cut(s) 1052, 1145
MluCI AATT 5 cut(s) 29, 824, 1206, 1295, 1364
MmeI TCCRAC 1 cut(s) 657
Mph1103I ATGCAT 1 cut(s) 1305
MseI TTAA 3 cut(s) 1116, 1379, 1449
MslI CAYNNNNRTG 1 cut(s) 945
MspCI CTTAAG 1 cut(s) 1448
MspI CCGG 3 cut(s) 362, 524, 770
MspR9I CCNGG 3 cut(s) 362, 524, 771
MunI CAATTG 1 cut(s) 29
NciI CCSGG 3 cut(s) 362, 524, 771
NdeII GATC 5 cut(s) 208, 748, 1384, 1539, 1575
NlaIII CATG 6 cut(s) 328, 722, 1165, 1194, 1351, 1587
NlaIV GGNNCC 3 cut(s) 49, 1144, 1374
NmeAIII GCCGAG 2 cut(s) 693, 1003
NsbI TGCGCA 3 cut(s) 158, 485, 635
NsiI ATGCAT 1 cut(s) 1305
PagI TCATGA 1 cut(s) 1583
PciSI GCTCTTC 1 cut(s) 1057
PfeI GAWTC 9 cut(s) 200, 365, 527, 639, 698, 763, 1103, 1277, 1402
PkrI GCNGC 4 cut(s) 853, 865, 931, 934
PpuMI RGGWCCY 1 cut(s) 1372
Psp124BI GAGCTC 1 cut(s) 1052
Psp5II RGGWCCY 1 cut(s) 1372
PspN4I GGNNCC 3 cut(s) 49, 1144, 1374
PspPI GGNCC 1 cut(s) 1372
PspPPI RGGWCCY 1 cut(s) 1372
PsuI RGATCY 4 cut(s) 208, 1384, 1539, 1575
RsaI GTAC 4 cut(s) 811, 1063, 1237, 1466
RsaNI GTAC 4 cut(s) 810, 1062, 1236, 1465
RseI CAYNNNNRTG 1 cut(s) 945
SacI GAGCTC 1 cut(s) 1052
SalI GTCGAC 3 cut(s) 136, 463, 613
SapI GCTCTTC 1 cut(s) 1057
SaqAI TTAA 3 cut(s) 1116, 1379, 1449
SatI GCNGC 4 cut(s) 852, 864, 930, 933
Sau3AI GATC 5 cut(s) 208, 748, 1384, 1539, 1575
Sau96I GGNCC 1 cut(s) 1372
ScrFI CCNGG 3 cut(s) 362, 524, 771
SduI GDGCHC 2 cut(s) 1052, 1145
SfaNI GCATC 4 cut(s) 949, 1212, 1290, 1312
SinI GGWCC 1 cut(s) 1372
SmiMI CAYNNNNRTG 1 cut(s) 945
SmlI CTYRAG 4 cut(s) 1217, 1397, 1448, 1469
SmoI CTYRAG 4 cut(s) 1217, 1397, 1448, 1469
Sse9I AATT 5 cut(s) 29, 824, 1206, 1295, 1364
SsiI CCGC 1 cut(s) 1579
SspMI CTAG 4 cut(s) 93, 258, 582, 1200
SstI GAGCTC 1 cut(s) 1052
StyD4I CCNGG 3 cut(s) 360, 522, 769
StyI CCWWGG 3 cut(s) 910, 1286, 1435
TaaI ACNGT 6 cut(s) 142, 307, 469, 619, 814, 1066
TaiI ACGT 1 cut(s) 677
TaqI TCGA 6 cut(s) 137, 302, 464, 614, 780, 821
TasI AATT 5 cut(s) 29, 824, 1206, 1295, 1364
TfiI GAWTC 9 cut(s) 200, 365, 527, 639, 698, 763, 1103, 1277, 1402
Tru1I TTAA 3 cut(s) 1116, 1379, 1449
Tru9I TTAA 3 cut(s) 1116, 1379, 1449
TscAI CASTG 2 cut(s) 952, 1426
TseI GCWGC 4 cut(s) 851, 863, 929, 932
TspDTI ATGAA 4 cut(s) 237, 561, 722, 1142
TspGWI ACGGA 6 cut(s) 127, 292, 454, 616, 1045, 1258
TspRI CASTG 2 cut(s) 952, 1426
Vha464I CTTAAG 1 cut(s) 1448
VpaK11BI GGWCC 1 cut(s) 1372
XapI RAATTY 1 cut(s) 1206
XmiI GTMKAC 6 cut(s) 137, 464, 614, 840, 1270, 1431
XspI CTAG 4 cut(s) 93, 258, 582, 1200
Zsp2I ATGCAT 1 cut(s) 1305
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.