Prupe.6G355800_v2.0.a1

Encoded by

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
30201286 .. 30204589
3304 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G355800.1

Sequence Viewer

Length: 1320 bp
ATGTGCAATCATATCTTCCGATTCCATTTCCACACTACTTTCATCTTCATCATTTCCGAGGTCCCATCGTGCTTGTATAAGTTTGGCGTAAGTGCTAGATTTATAATGGCTTACATCCCACCGCACAAGCGGCATTCAAAGGAATCGGAGAGCCCGTTGCCAACTCCGGAGCTACTTGCTCCTCAATTCAAGAAAAAATTGAATTTGCGATCATCTAAGTTTAATGCGGATTGGGATGGAAAGGTAATTTATGCAAACCATGCTAGATCGAGATGGTGCGTCATTGGTTTGGATGATGAGAACCAGTTTCCATCTTCTGTTAATCTTGAGCCCATTTCCTTGGAAACCACTGAGAGGAGAACTGGAGAAAAGCCTCTAGCTTTAATTAATACTAGTCTAGATAAGGAAGGTAGTGAGGTGAAATGGTACTTGCCAAAGAGCCCTTGGGTATCGTTAGCAGAAAATGTGCTGGAAGACCTACTTTCTTCTTTTGAAAATGTGAAGAATGATATGAAGTGCCCAAAGCTTGAACAAGTAAAGCCGTCGTTGGTTGCTAGAGTGGGAAAAGTACTTTTTCAGAGGAGCCCTTCAGTTAACATGGAATCTATCAGAAATAATTTGGATACGGAAATCTTGAAACAGTGGAAGAGGTCATTTTACACGACTCTTCCTGTTTCATATAAGGAAAACATTCTAAAGGAAGTTGTCCCAAACATTGGAGTTGATTTTGAAGAGGAGAAAGATGAATACCAAGTAAAGTTATCCGATTCAACAAGACCAGATTCAATTCTCTCCTGCAAATGTAGTGTAATGAAAGAACATGGAAAGCTACAACTTTACAAGATTGAACTAAATCAACTTCGTGACATGGTCATAGACATATCATGCCCTAATAAGAATCTGGACCTGAGAGTGATGCTATGCACGAAGAGACCTGTAACAGCTCTGAGTGATGACGAGATGCAAAGCATTAGGGATCTGATTAGTTCTGCGGTTCTAGATCCAGATGTGAAGGGTGGGTTGAGATGGCCCCTGGGGAAGGAGTCTTCTGGAGATAGATACAAAGTTGTTGGGATTTGGCACGTAATAGCTAATATGTATACAAATCCATCATTAAGACTGAAGGTAAGACATGCTGATCGATTTGATTTTAGGACCTCAACTGGGGAAGCTACCTGGGAGGTTAGTCTGATGTTGAAAAAGGTCGTGTCAAAGTTACAGGAAGAGAAGGTTGAATTCAGCTCGATTTCTGAAATTCTCGAGGAAAATATGAGGATGATATGGGACAACTTCTTGTGCTCTGAACATTTTCTAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

440

Amino Acids

50.68

Weight (kDa)

7.57

Isoelectric Point (pI)

52.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 104
AccB7I CCANNNNNTGG 1 cut(s) 716
AccI GTMKAC 1 cut(s) 1100
AccIII TCCGGA 1 cut(s) 166
AciI CCGC 4 cut(s) 122, 130, 227, 992
AclWI GGATC 2 cut(s) 984, 995
AcsI RAATTY 3 cut(s) 202, 1235, 1254
AcuI CTGAAG 2 cut(s) 573, 1142
AfaI GTAC 2 cut(s) 428, 570
AfiI CCNNNNNNNGG 4 cut(s) 354, 716, 1039, 1164
AhlI ACTAGT 1 cut(s) 392
AjnI CCWGG 2 cut(s) 1032, 1175
AluBI AGCT 8 cut(s) 172, 380, 526, 829, 944, 1091, 1172, 1242
AluI AGCT 8 cut(s) 172, 380, 526, 829, 944, 1091, 1172, 1242
Alw21I GWGCWC 1 cut(s) 1301
Alw26I GTCTC 1 cut(s) 925
AlwI GGATC 2 cut(s) 984, 995
Ama87I CYCGRG 1 cut(s) 1259
Aor13HI TCCGGA 1 cut(s) 166
AoxI GGCC 1 cut(s) 1028
ApoI RAATTY 3 cut(s) 202, 1235, 1254
AseI ATTAAT 1 cut(s) 387
Asp700I GAANNNNTTC 2 cut(s) 690, 1308
AspS9I GGNCC 4 cut(s) 61, 904, 1029, 1155
AsuHPI GGTGA 1 cut(s) 430
AvaI CYCGRG 1 cut(s) 1259
AvaII GGWCC 3 cut(s) 61, 904, 1155
BaeGI GKGCMC 1 cut(s) 521
BanII GRGCYC 4 cut(s) 155, 333, 443, 587
BbsI GAAGAC 2 cut(s) 480, 1038
Bbv12I GWGCWC 1 cut(s) 1301
BccI CCATC 6 cut(s) 73, 230, 267, 319, 1020, 1117
BceAI ACGGC 1 cut(s) 526
BciT130I CCWGG 2 cut(s) 1034, 1177
BciVI GTATCC 1 cut(s) 616
BcoDI GTCTC 1 cut(s) 925
BcuI ACTAGT 1 cut(s) 392
BfaI CTAG 7 cut(s) 96, 264, 377, 393, 398, 555, 998
BfuI GTATCC 1 cut(s) 616
BisI GCNGC 1 cut(s) 131
BlsI GCNGC 1 cut(s) 132
BmcAI AGTACT 1 cut(s) 570
Bme1390I CCNGG 2 cut(s) 1034, 1177
Bme18I GGWCC 3 cut(s) 61, 904, 1155
BmeT110I CYCGRG 1 cut(s) 1259
BmgT120I GGNCC 4 cut(s) 61, 904, 1029, 1155
BmiI GGNNCC 3 cut(s) 63, 584, 1031
BmrFI CCNGG 2 cut(s) 1034, 1177
BmrI ACTGGG 1 cut(s) 1173
BmsI GCATC 2 cut(s) 906, 951
BmuI ACTGGG 1 cut(s) 1173
BpiI GAAGAC 2 cut(s) 480, 1038
BpmI CTGGAG 2 cut(s) 384, 1071
BpuEI CTTGAG 1 cut(s) 347
Bsa29I ATCGAT 1 cut(s) 1141
BsaAI YACGTR 1 cut(s) 1084
BsaI GGTCTC 1 cut(s) 925
BsaJI CCNNGG 6 cut(s) 57, 339, 443, 1032, 1033, 1176
BsaWI WCCGGW 1 cut(s) 166
BsaXI ACNNNNNCTCC 2 cut(s) 140, 170
Bsc4I CCNNNNNNNGG 4 cut(s) 354, 716, 1039, 1164
Bse1I ACTGG 3 cut(s) 304, 367, 1168
BseAI TCCGGA 1 cut(s) 166
BseBI CCWGG 2 cut(s) 1034, 1177
BseCI ATCGAT 1 cut(s) 1141
BseDI CCNNGG 6 cut(s) 57, 339, 443, 1032, 1033, 1176
BseGI GGATG 4 cut(s) 114, 241, 298, 1281
BseLI CCNNNNNNNGG 4 cut(s) 354, 716, 1039, 1164
BseMII CTCAG 3 cut(s) 342, 899, 938
BseNI ACTGG 3 cut(s) 304, 367, 1168
BseRI GAGGAG 4 cut(s) 171, 370, 595, 749
BseSI GKGCMC 1 cut(s) 521
BshFI GGCC 1 cut(s) 1030
BshVI ATCGAT 1 cut(s) 1141
BsiHKAI GWGCWC 1 cut(s) 1301
BsiHKCI CYCGRG 1 cut(s) 1259
BsiSI CCGG 1 cut(s) 167
BslFI GGGAC 3 cut(s) 47, 692, 1298
BslI CCNNNNNNNGG 4 cut(s) 354, 716, 1039, 1164
BsmAI GTCTC 1 cut(s) 925
BsmFI GGGAC 3 cut(s) 47, 692, 1298
BsmI GAATGC 1 cut(s) 133
BsnI GGCC 1 cut(s) 1030
Bso31I GGTCTC 1 cut(s) 925
BsoBI CYCGRG 1 cut(s) 1259
Bsp1286I GDGCHC 6 cut(s) 155, 333, 443, 521, 587, 1301
Bsp13I TCCGGA 1 cut(s) 166
Bsp143I GATC 5 cut(s) 209, 266, 976, 1000, 1138
BspACI CCGC 4 cut(s) 122, 130, 227, 992
BspANI GGCC 1 cut(s) 1030
BspCNI CTCAG 3 cut(s) 343, 900, 939
BspDI ATCGAT 1 cut(s) 1141
BspEI TCCGGA 1 cut(s) 166
BspLI GGNNCC 3 cut(s) 63, 584, 1031
BspPI GGATC 2 cut(s) 984, 995
BspTNI GGTCTC 1 cut(s) 925
BsrI ACTGG 3 cut(s) 304, 367, 1168
BssECI CCNNGG 6 cut(s) 57, 339, 443, 1032, 1033, 1176
BssMI GATC 5 cut(s) 209, 266, 976, 1000, 1138
BssNAI GTATAC 1 cut(s) 1101
BssT1I CCWWGG 2 cut(s) 339, 443
Bst1107I GTATAC 1 cut(s) 1101
Bst2UI CCWGG 2 cut(s) 1034, 1177
Bst4CI ACNGT 1 cut(s) 642
Bst6I CTCTTC 5 cut(s) 641, 672, 726, 923, 1218
BstAPI GCANNNNNTGC 1 cut(s) 260
BstBAI YACGTR 1 cut(s) 1084
BstDEI CTNAG 4 cut(s) 216, 351, 908, 947
BstENI CCTNNNNNAGG 1 cut(s) 1037
BstF5I GGATG 4 cut(s) 114, 241, 298, 1281
BstKTI GATC 5 cut(s) 212, 269, 979, 1003, 1141
BstMAI GTCTC 1 cut(s) 925
BstMBI GATC 5 cut(s) 209, 266, 976, 1000, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 130, 260
BstNI CCWGG 2 cut(s) 1034, 1177
BstNSI RCATGY 1 cut(s) 1136
BstSCI CCNGG 2 cut(s) 1032, 1175
BstSLI GKGCMC 1 cut(s) 521
BstV2I GAAGAC 2 cut(s) 480, 1038
BstX2I RGATCY 2 cut(s) 976, 1000
BstXI CCANNNNNNTGG 1 cut(s) 340
BstYI RGATCY 2 cut(s) 976, 1000
BstZ17I GTATAC 1 cut(s) 1101
Bsu15I ATCGAT 1 cut(s) 1141
BsuI GTATCC 1 cut(s) 616
BsuRI GGCC 1 cut(s) 1030
BsuTUI ATCGAT 1 cut(s) 1141
BtsCI GGATG 4 cut(s) 114, 241, 298, 1281
BtsIMutI CAGTG 2 cut(s) 348, 647
Cfr13I GGNCC 4 cut(s) 61, 904, 1029, 1155
ClaI ATCGAT 1 cut(s) 1141
CseI GACGC 1 cut(s) 268
Csp6I GTAC 2 cut(s) 427, 569
CviAII CATG 6 cut(s) 260, 598, 821, 868, 885, 1133
CviQI GTAC 2 cut(s) 427, 569
DdeI CTNAG 4 cut(s) 216, 351, 908, 947
DpnI GATC 5 cut(s) 211, 268, 978, 1002, 1140
DpnII GATC 5 cut(s) 209, 266, 976, 1000, 1138
Eam1104I CTCTTC 5 cut(s) 641, 672, 726, 923, 1218
EarI CTCTTC 5 cut(s) 641, 672, 726, 923, 1218
Eco130I CCWWGG 2 cut(s) 339, 443
Eco24I GRGCYC 4 cut(s) 155, 333, 443, 587
Eco31I GGTCTC 1 cut(s) 925
Eco47I GGWCC 3 cut(s) 61, 904, 1155
Eco57I CTGAAG 2 cut(s) 573, 1142
Eco88I CYCGRG 1 cut(s) 1259
EcoNI CCTNNNNNAGG 1 cut(s) 1037
EcoO109I RGGNCCY 2 cut(s) 61, 1155
EcoRI GAATTC 1 cut(s) 1235
EcoRII CCWGG 2 cut(s) 1032, 1175
EcoT14I CCWWGG 2 cut(s) 339, 443
EcoT38I GRGCYC 4 cut(s) 155, 333, 443, 587
ErhI CCWWGG 2 cut(s) 339, 443
FaeI CATG 6 cut(s) 263, 601, 824, 871, 888, 1136
FalI AAGNNNNNCTT 2 cut(s) 465, 497
FaqI GGGAC 3 cut(s) 47, 692, 1298
FatI CATG 6 cut(s) 259, 597, 820, 867, 884, 1132
FblI GTMKAC 1 cut(s) 1100
Fnu4HI GCNGC 1 cut(s) 131
FokI GGATG 4 cut(s) 101, 248, 305, 1288
FriOI GRGCYC 4 cut(s) 155, 333, 443, 587
Fsp4HI GCNGC 1 cut(s) 131
FspBI CTAG 7 cut(s) 96, 264, 377, 393, 398, 555, 998
GluI GCNGC 1 cut(s) 131
GsuI CTGGAG 2 cut(s) 384, 1071
HaeIII GGCC 1 cut(s) 1030
HapII CCGG 1 cut(s) 167
HgaI GACGC 1 cut(s) 268
Hin1II CATG 6 cut(s) 263, 601, 824, 871, 888, 1136
HincII GTYRAC 1 cut(s) 595
HindII GTYRAC 1 cut(s) 595
HindIII AAGCTT 1 cut(s) 524
HinfI GANTC 8 cut(s) 21, 143, 602, 664, 767, 782, 898, 1043
HpaI GTTAAC 1 cut(s) 595
HpaII CCGG 1 cut(s) 167
HphI GGTGA 1 cut(s) 430
Hpy166II GTNNAC 2 cut(s) 595, 1101
Hpy8I GTNNAC 2 cut(s) 595, 1101
Hpy99I CGWCG 1 cut(s) 547
HpyAV CCTTC 6 cut(s) 401, 597, 1006, 1033, 1117, 1222
HpyCH4III ACNGT 1 cut(s) 642
HpyCH4IV ACGT 1 cut(s) 1083
HpyCH4V TGCA 5 cut(s) 6, 254, 798, 924, 964
HpyF10VI GCNNNNNNNGC 2 cut(s) 130, 260
HpyF3I CTNAG 4 cut(s) 216, 351, 908, 947
HpySE526I ACGT 1 cut(s) 1083
Hsp92II CATG 6 cut(s) 263, 601, 824, 871, 888, 1136
Kpn2I TCCGGA 1 cut(s) 166
KspAI GTTAAC 1 cut(s) 595
Kzo9I GATC 5 cut(s) 209, 266, 976, 1000, 1138
LmnI GCTCC 3 cut(s) 169, 184, 582
LweI GCATC 2 cut(s) 906, 951
MaeI CTAG 7 cut(s) 96, 264, 377, 393, 398, 555, 998
MaeII ACGT 1 cut(s) 1083
MaeIII GTNAC 3 cut(s) 863, 937, 1215
MalI GATC 5 cut(s) 211, 268, 978, 1002, 1140
MboI GATC 5 cut(s) 209, 266, 976, 1000, 1138
MflI RGATCY 2 cut(s) 976, 1000
MhlI GDGCHC 6 cut(s) 155, 333, 443, 521, 587, 1301
MluCI AATT 9 cut(s) 185, 197, 202, 246, 384, 616, 786, 1235, 1254
MlyI GAGTC 2 cut(s) 658, 1052
MroI TCCGGA 1 cut(s) 166
MroXI GAANNNNTTC 2 cut(s) 690, 1308
MseI TTAA 6 cut(s) 222, 321, 383, 387, 594, 1115
MspI CCGG 1 cut(s) 167
MspR9I CCNGG 2 cut(s) 1034, 1177
Mva1269I GAATGC 1 cut(s) 133
MvaI CCWGG 2 cut(s) 1034, 1177
MwoI GCNNNNNNNGC 2 cut(s) 130, 260
NdeII GATC 5 cut(s) 209, 266, 976, 1000, 1138
NlaIII CATG 6 cut(s) 263, 601, 824, 871, 888, 1136
NlaIV GGNNCC 3 cut(s) 63, 584, 1031
NmuCI GTSAC 1 cut(s) 863
NspI RCATGY 1 cut(s) 1136
PacI TTAATTAA 1 cut(s) 387
PaeR7I CTCGAG 1 cut(s) 1259
PasI CCCWGGG 1 cut(s) 1033
PcsI WCGNNNNNNNCGW 1 cut(s) 152
PctI GAATGC 1 cut(s) 133
PdmI GAANNNNTTC 2 cut(s) 690, 1308
PfeI GAWTC 6 cut(s) 21, 143, 602, 767, 782, 898
PflFI GACNNNGTC 1 cut(s) 869
PflMI CCANNNNNTGG 1 cut(s) 716
PkrI GCNGC 1 cut(s) 132
PleI GAGTC 2 cut(s) 658, 1051
PpsI GAGTC 2 cut(s) 658, 1051
Ppu21I YACGTR 1 cut(s) 1084
PpuMI RGGWCCY 2 cut(s) 61, 1155
PshBI ATTAAT 1 cut(s) 387
PsiI TTATAA 1 cut(s) 104
Psp5II RGGWCCY 2 cut(s) 61, 1155
Psp6I CCWGG 2 cut(s) 1032, 1175
PspGI CCWGG 2 cut(s) 1032, 1175
PspN4I GGNNCC 3 cut(s) 63, 584, 1031
PspPI GGNCC 4 cut(s) 61, 904, 1029, 1155
PspPPI RGGWCCY 2 cut(s) 61, 1155
PsuI RGATCY 2 cut(s) 976, 1000
PsyI GACNNNGTC 1 cut(s) 869
RsaI GTAC 2 cut(s) 428, 570
RsaNI GTAC 2 cut(s) 427, 569
SaqAI TTAA 6 cut(s) 222, 321, 383, 387, 594, 1115
SatI GCNGC 1 cut(s) 131
Sau3AI GATC 5 cut(s) 209, 266, 976, 1000, 1138
Sau96I GGNCC 4 cut(s) 61, 904, 1029, 1155
ScaI AGTACT 1 cut(s) 570
SchI GAGTC 2 cut(s) 658, 1052
ScrFI CCNGG 2 cut(s) 1034, 1177
SduI GDGCHC 6 cut(s) 155, 333, 443, 521, 587, 1301
SfaNI GCATC 2 cut(s) 906, 951
Sfr274I CTCGAG 1 cut(s) 1259
SinI GGWCC 3 cut(s) 61, 904, 1155
SlaI CTCGAG 1 cut(s) 1259
SmlI CTYRAG 2 cut(s) 326, 1259
SmoI CTYRAG 2 cut(s) 326, 1259
SpeI ACTAGT 1 cut(s) 392
Sse9I AATT 9 cut(s) 185, 197, 202, 246, 384, 616, 786, 1235, 1254
SsiI CCGC 4 cut(s) 122, 130, 227, 992
SspMI CTAG 7 cut(s) 96, 264, 377, 393, 398, 555, 998
StyD4I CCNGG 2 cut(s) 1032, 1175
StyI CCWWGG 2 cut(s) 339, 443
TaaI ACNGT 1 cut(s) 642
TaiI ACGT 1 cut(s) 1086
TaqI TCGA 4 cut(s) 269, 1141, 1244, 1260
TasI AATT 9 cut(s) 185, 197, 202, 246, 384, 616, 786, 1235, 1254
TatI WGTACW 1 cut(s) 568
TauI GCSGC 1 cut(s) 133
TfiI GAWTC 6 cut(s) 21, 143, 602, 767, 782, 898
Tru1I TTAA 6 cut(s) 222, 321, 383, 387, 594, 1115
Tru9I TTAA 6 cut(s) 222, 321, 383, 387, 594, 1115
TscAI CASTG 2 cut(s) 355, 647
TseFI GTSAC 1 cut(s) 863
Tsp45I GTSAC 1 cut(s) 863
TspDTI ATGAA 6 cut(s) 31, 37, 527, 666, 759, 827
TspGWI ACGGA 1 cut(s) 641
TspRI CASTG 2 cut(s) 355, 647
Tth111I GACNNNGTC 1 cut(s) 869
Van91I CCANNNNNTGG 1 cut(s) 716
VpaK11BI GGWCC 3 cut(s) 61, 904, 1155
VspI ATTAAT 1 cut(s) 387
XagI CCTNNNNNAGG 1 cut(s) 1037
XapI RAATTY 3 cut(s) 202, 1235, 1254
XbaI TCTAGA 2 cut(s) 397, 997
XceI RCATGY 1 cut(s) 1136
XcmI CCANNNNNNNNNTGG 1 cut(s) 441
XhoI CTCGAG 1 cut(s) 1259
XmiI GTMKAC 1 cut(s) 1100
XmnI GAANNNNTTC 2 cut(s) 690, 1308
XspI CTAG 7 cut(s) 96, 264, 377, 393, 398, 555, 998
ZrmI AGTACT 1 cut(s) 570
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.