Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0001111

Physical Location & Seq

Genomic Coordinates Reverse (-)

20084928 .. 20087948

Gene Structure 3021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g16790.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGTGCAGCAAAGATCGATCCTACCCCACGTTTTCTCACGGTTAATTGACCCAAAGGAGTTAGTTAGGCAGCCGTGCTCGACAACGTTGGGTATTGTTAGCAAAACTTACAGCGTAGATTCCCTCTTGCCTGCTTTGCTCCGTTCACTAGATGAGCAGCGATCACCAAAGGCCAAACTAGCTGTTATTGAGTTTTCCATTAGTTCTTTTAACAAGCATTCACTGAATCCTGAAGGTTCTGGTAATACTGGCATCCTTAAATTATGGCTTTCTAAGTTGGCGCCATTGGTCCATGATAAAAATACTAAACTAAAGGAGGCAGCCATTACATGCATAATATCTGTTTACTCCCACTTTGATTCTGTAGCCGTCTTGAATTTTATTCTTAGTTTGTCAGTTGAAGAACAAAATTCTTTGAGAAGGGCCCTGAAACAGTACACTCCTCGTATTGAAGTGGACCTTATGAACTTTTTGCAAAACAAGAAAGAGCGCCAGCGCCTTAAATCTTCTTATGATCGATCTGATGTAGTTGGAACATCTTCTGAAGAAGGATATGTTAGTGCCTCAAAGAAGAGTCACTTTGTTGGGAGGTATTCTGCTGGTTCAGTTGATATTGATGGTGGCAGGAAGTGGAGTTCAACCCAAGAATCGGCCATGGTCACCAGTACTATTGGTCAAGCAGCTTCTGATGAAACACAGGAGAACTTGTATCAGAATTTTGAGACCGGTTCCAACACTGATATTCTCAATTCAAAATTCAAGGATATGTCTTACACTATGAATTCTGTGAGTCAGAACTTGGGCTCCTGGACCAGCCCAGTGGATAAAGTTGATGGTAGAACAAATTTAGAAGGCTTGTCTACTACTTGCCTAGATGTTAATGGTCTTATGAGCTTGGACCATATAGGGGTTGCTGAGAGTACTGGGCATGATAGTGAAGCTGCCACTGACTTGGACCCTAATCATTATAATCTTACAACTTTGAAGGTTAATTCTACACCAGAATCAGGTCCCAGCATTCCTCAAATACTTTATCTGATCGGCAATGGAACTGAGGAAAGCCCTACAGCAAGCAAACGTGGTGCACTTCAACAATTAATTGATGCTTCCATAGCTAATGACCACTCTGTTTGGACCAAGTACTTCAATCAGATTTTGACTGTTGTACTTGAGGTGTTGGATGATTTGGATTCCTCGATTCGGGAACTCTCTCTTTCCTTGATTGTCGAAATGCTTAAAAACCAGAAACATGCAATGGAAGATTCTGTTGAGATCGTAATTGAGAAGCTGCTTCATGTTACGAAGGATGTAGTTCCCAAGGTTTCAAATGAATCCGAGCACTGCTTGAGCATCGTTTTGGCTCAGTATGATCCATTCAGATGTCTAAGCGTTATTGCCCCTCTGTTGGTAACTGAAGATGAGAAAATTCTTGTTACTTGCATCAACTGTTTGACAAAGCTTGTGGGCCGGCTTTCACAAGAGGAACTGATGGCTCAGTTACCGTCATTTTTGCCTGCACTTTTCGAAGCGTTTGGAAACCAGAGTGCTGACGTTCGCAAGACTGTTGTCTTCTGTTTAGTCGATATATACATCATGCTCGGAAAAGCATTCTTGCCGTACCTGGAGGGGCTCAACAGCACACAGTTACGGCTGGTGACTATTTATGCTAATCGAATTTCACAGGCCAGGACGGGCACTTCAATTGACACCAACCATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000902 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0005886 GO:0005911 GO:0005938 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007026 GO:0007049 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009653 GO:0009826 GO:0009987 GO:0010639 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0022607 GO:0030054 GO:0030865 GO:0031023 GO:0031109 GO:0031110 GO:0031111 GO:0031114 GO:0031122 GO:0031647 GO:0032502 GO:0032886 GO:0032989 GO:0033043 GO:0034453 GO:0034622 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046785 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050821 GO:0051010 GO:0051128 GO:0051129 GO:0051258 GO:0051302 GO:0051493 GO:0051494 GO:0051781 GO:0055044 GO:0060560 GO:0065003 GO:0065007 GO:0065008 GO:0070507 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CLASP_N HEAT Vac14_Fab1_bd

Protein Analysis

574

Amino Acids

63.33

Weight (kDa)

5.49

Isoelectric Point (pI)

38.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20190
fragaria_vesca	FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_4g18130
malus_domestica	MD05G1182800.v1.1 MD10G1170900.v1.1
prunus_persica	Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1
pyrus_communis	pycom05g16790 pycom10g14730
rosa_chinensis	RchiOBHm_Chr1g0330771 RchiOBHm_Chr1g0330781 RchiOBHm_Chr1g0330801 RchiOBHm_Chr6g0285551
rosa_laevigata	RLG00000012628 RLG00000029789 RLG00000029790 RLG00000029796
rosa_multiflora	Rmu_co8432325.1_g000001 Rmu_sc0000723.1_g000001 Rmu_sc0000723.1_g000002 Rmu_sc0001491.1_g000006 Rmu_sc0002725.1_g000020 Rmu_sc0012495.1_g000004 Rmu_sc0017770.1_g000001 Rmu_sc0031058.1_g000001
rosa_roxburghii	Rroxscaffold_4G00319710 Rroxscaffold_4G00319750 Rroxscaffold_4G00319790 Rroxscaffold_4G00319800 Rroxscaffold_4G00319810 Rroxscaffold_7G00183030
rosa_rugosa	Rorug06G0175400
rosa_samantha	Rh1AG108200 Rh1AG109200 Rh1AG110500 Rh1AG111400 Rh1CG105100 Rh1CG105400 Rh1CG105500 Rh1CG106800 Rh2BG359900 Rh2DG376700 Rh4CG127100 Rh6AG287000 Rh6BG288200 Rh6CG289400 Rh6DG282200
rosa_wichuraiana	Rw0G004360 Rw1G008500 Rw1G008580 Rw1G008750 Rw1G008840 Rw6G024670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	969
AccB1I	GGYRCC	1 cut(s)	280
AccI	GTMKAC	1 cut(s)	860
AclI	AACGTT	1 cut(s)	86
AclWI	GGATC	2 cut(s)	13, 1364
AcoI	YGGCCR	1 cut(s)	651
AcsI	RAATTY	8 cut(s)	376, 409, 715, 755, 781, 844, 1425, 1674
AcuI	CTGAAG	3 cut(s)	252, 564, 1434
AcyI	GRCGYC	1 cut(s)	281
AfaI	GTAC	6 cut(s)	437, 667, 922, 1142, 1167, 1619
AfiI	CCNNNNNNNGG	5 cut(s)	649, 907, 1007, 1200, 1405
AgeI	ACCGGT	1 cut(s)	725
AjnI	CCWGG	3 cut(s)	806, 1620, 1685
AloI	GAACNNNNNNTCC	4 cut(s)	619, 651, 788, 820
AluBI	AGCT	7 cut(s)	182, 683, 894, 941, 1115, 1288, 1459
AluI	AGCT	7 cut(s)	182, 683, 894, 941, 1115, 1288, 1459
Alw21I	GWGCWC	3 cut(s)	80, 1087, 1341
Alw26I	GTCTC	1 cut(s)	716
Alw44I	GTGCAC	1 cut(s)	1083
AlwI	GGATC	2 cut(s)	13, 1364
AlwNI	CAGNNNCTG	1 cut(s)	686
AoxI	GGCC	5 cut(s)	171, 423, 651, 1465, 1683
ApaI	GGGCCC	1 cut(s)	427
ApaLI	GTGCAC	1 cut(s)	1083
ApeKI	GCWGC	7 cut(s)	7, 70, 157, 320, 680, 941, 1288
ApoI	RAATTY	8 cut(s)	376, 409, 715, 755, 781, 844, 1425, 1674
AseI	ATTAAT	1 cut(s)	1097
AsiGI	ACCGGT	1 cut(s)	725
Asp700I	GAANNNNTTC	1 cut(s)	538
AspLEI	GCGC	3 cut(s)	283, 492, 498
AsuHPI	GGTGA	3 cut(s)	156, 652, 1666
AsuII	TTCGAA	1 cut(s)	1524
AvaII	GGWCC	7 cut(s)	289, 457, 810, 898, 955, 1010, 1134
BaeGI	GKGCMC	3 cut(s)	427, 1087, 1697
BanI	GGYRCC	1 cut(s)	280
BanII	GRGCYC	3 cut(s)	427, 806, 1632
BbsI	GAAGAC	1 cut(s)	1561
Bbv12I	GWGCWC	3 cut(s)	80, 1087, 1341
BbvI	GCAGC	7 cut(s)	19, 82, 169, 332, 692, 928, 1275
BccI	CCATC	3 cut(s)	611, 827, 1483
BceAI	ACGGC	4 cut(s)	58, 353, 1600, 1664
BciT130I	CCWGG	3 cut(s)	808, 1622, 1687
BcoDI	GTCTC	1 cut(s)	716
BfaI	CTAG	3 cut(s)	149, 179, 872
BfmI	CTRYAG	2 cut(s)	363, 1065
BfoI	RGCGCY	3 cut(s)	284, 493, 499
BisI	GCNGC	7 cut(s)	8, 71, 158, 321, 681, 942, 1289
BlsI	GCNGC	7 cut(s)	9, 72, 159, 322, 682, 943, 1290
BmcAI	AGTACT	3 cut(s)	667, 922, 1142
Bme1390I	CCNGG	3 cut(s)	808, 1622, 1687
Bme18I	GGWCC	7 cut(s)	289, 457, 810, 898, 955, 1010, 1134
BmiI	GGNNCC	6 cut(s)	282, 425, 730, 805, 957, 1012
BmrFI	CCNGG	3 cut(s)	808, 1622, 1687
BmrI	ACTGGG	2 cut(s)	812, 933
BmsI	GCATC	4 cut(s)	261, 1093, 1359, 1449
BmuI	ACTGGG	2 cut(s)	812, 933
BoxI	GACNNNNGTC	1 cut(s)	1565
BpiI	GAAGAC	1 cut(s)	1561
BpmI	CTGGAG	1 cut(s)	1643
Bpu14I	TTCGAA	1 cut(s)	1524
BpuEI	CTTGAG	2 cut(s)	1190, 1366
Bsa29I	ATCGAT	2 cut(s)	17, 517
BsaHI	GRCGYC	1 cut(s)	281
BsaI	GGTCTC	1 cut(s)	716
BsaJI	CCNNGG	2 cut(s)	654, 1317
BsaWI	WCCGGW	1 cut(s)	725
BsaXI	ACNNNNNCTCC	4 cut(s)	692, 722, 788, 818
Bsc4I	CCNNNNNNNGG	5 cut(s)	649, 907, 1007, 1200, 1405
Bse118I	RCCGGY	2 cut(s)	725, 1467
Bse1I	ACTGG	4 cut(s)	253, 663, 818, 928
Bse3DI	GCAATG	2 cut(s)	1051, 1260
BseBI	CCWGG	3 cut(s)	808, 1622, 1687
BseCI	ATCGAT	2 cut(s)	17, 517
BseDI	CCNNGG	2 cut(s)	654, 1317
BseGI	GGATG	3 cut(s)	252, 1186, 1312
BseLI	CCNNNNNNNGG	5 cut(s)	649, 907, 1007, 1200, 1405
BseMI	GCAATG	2 cut(s)	1051, 1260
BseMII	CTCAG	4 cut(s)	906, 1044, 1376, 1508
BseNI	ACTGG	4 cut(s)	253, 663, 818, 928
BseRI	GAGGAG	1 cut(s)	432
BseSI	GKGCMC	3 cut(s)	427, 1087, 1697
BseXI	GCAGC	7 cut(s)	19, 82, 169, 332, 692, 928, 1275
BseYI	CCCAGC	1 cut(s)	1013
BsgI	GTGCAG	2 cut(s)	26, 1500
BshFI	GGCC	5 cut(s)	173, 425, 653, 1467, 1685
BshNI	GGYRCC	1 cut(s)	280
BshTI	ACCGGT	1 cut(s)	725
BshVI	ATCGAT	2 cut(s)	17, 517
BsiHKAI	GWGCWC	3 cut(s)	80, 1087, 1341
BsiSI	CCGG	2 cut(s)	726, 1468
BslFI	GGGAC	1 cut(s)	996
BslI	CCNNNNNNNGG	5 cut(s)	649, 907, 1007, 1200, 1405
BsmAI	GTCTC	1 cut(s)	716
BsmFI	GGGAC	1 cut(s)	996
BsmI	GAATGC	3 cut(s)	217, 1017, 1607
BsnI	GGCC	5 cut(s)	173, 425, 653, 1467, 1685
Bso31I	GGTCTC	1 cut(s)	716
Bsp119I	TTCGAA	1 cut(s)	1524
Bsp120I	GGGCCC	1 cut(s)	423
Bsp1286I	GDGCHC	7 cut(s)	80, 427, 806, 1087, 1341, 1632, 1697
Bsp143I	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
Bsp19I	CCATGG	1 cut(s)	654
BspANI	GGCC	5 cut(s)	173, 425, 653, 1467, 1685
BspCNI	CTCAG	4 cut(s)	907, 1045, 1375, 1507
BspDI	ATCGAT	2 cut(s)	17, 517
BspLI	GGNNCC	6 cut(s)	282, 425, 730, 805, 957, 1012
BspPI	GGATC	2 cut(s)	13, 1364
BspT104I	TTCGAA	1 cut(s)	1524
BspT107I	GGYRCC	1 cut(s)	280
BspTNI	GGTCTC	1 cut(s)	716
BsrDI	GCAATG	2 cut(s)	1051, 1260
BsrFI	RCCGGY	2 cut(s)	725, 1467
BsrI	ACTGG	4 cut(s)	253, 663, 818, 928
BssAI	RCCGGY	2 cut(s)	725, 1467
BssECI	CCNNGG	2 cut(s)	654, 1317
BssMI	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
BssNI	GRCGYC	1 cut(s)	281
BssT1I	CCWWGG	2 cut(s)	654, 1317
Bst2UI	CCWGG	3 cut(s)	808, 1622, 1687
Bst4CI	ACNGT	7 cut(s)	42, 435, 1162, 1448, 1503, 1564, 1644
Bst6I	CTCTTC	1 cut(s)	566
BstACI	GRCGYC	1 cut(s)	281
BstBI	TTCGAA	1 cut(s)	1524
BstC8I	GCNNGC	5 cut(s)	132, 494, 1072, 1469, 1515
BstDEI	CTNAG	7 cut(s)	273, 386, 915, 1053, 1362, 1385, 1494
BstDSI	CCRYGG	1 cut(s)	654
BstEII	GGTNACC	1 cut(s)	658
BstF5I	GGATG	3 cut(s)	252, 1186, 1312
BstH2I	RGCGCY	3 cut(s)	284, 493, 499
BstHHI	GCGC	3 cut(s)	283, 492, 498
BstKTI	GATC	8 cut(s)	17, 21, 164, 517, 521, 1041, 1275, 1372
BstMAI	GTCTC	1 cut(s)	716
BstMBI	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
BstMWI	GCNNNNNNNGC	3 cut(s)	136, 179, 1112
BstNI	CCWGG	3 cut(s)	808, 1622, 1687
BstNSI	RCATGY	2 cut(s)	333, 1253
BstPAI	GACNNNNGTC	1 cut(s)	1565
BstPI	GGTNACC	1 cut(s)	658
BstSCI	CCNGG	3 cut(s)	806, 1620, 1685
BstSFI	CTRYAG	2 cut(s)	363, 1065
BstSLI	GKGCMC	3 cut(s)	427, 1087, 1697
BstV1I	GCAGC	7 cut(s)	19, 82, 169, 332, 692, 928, 1275
BstV2I	GAAGAC	1 cut(s)	1561
BstXI	CCANNNNNNTGG	2 cut(s)	820, 952
Bsu15I	ATCGAT	2 cut(s)	17, 517
BsuRI	GGCC	5 cut(s)	173, 425, 653, 1467, 1685
BsuTUI	ATCGAT	2 cut(s)	17, 517
BtgI	CCRYGG	1 cut(s)	654
BtsCI	GGATG	3 cut(s)	252, 1186, 1312
BtsI	GCAGTG	1 cut(s)	1339
BtsIMutI	CAGTG	5 cut(s)	221, 735, 825, 945, 1339
Cac8I	GCNNGC	5 cut(s)	132, 494, 1072, 1469, 1515
CaiI	CAGNNNCTG	1 cut(s)	686
CfoI	GCGC	3 cut(s)	283, 492, 498
Cfr10I	RCCGGY	2 cut(s)	725, 1467
ClaI	ATCGAT	2 cut(s)	17, 517
Csp6I	GTAC	6 cut(s)	436, 666, 921, 1141, 1166, 1618
CspAI	ACCGGT	1 cut(s)	725
CspCI	CAANNNNNGTGG	4 cut(s)	1112, 1147, 1443, 1478
CviAII	CATG	8 cut(s)	293, 330, 655, 929, 1250, 1295, 1594, 1715
CviQI	GTAC	6 cut(s)	436, 666, 921, 1141, 1166, 1618
DdeI	CTNAG	7 cut(s)	273, 386, 915, 1053, 1362, 1385, 1494
DinI	GGCGCC	1 cut(s)	282
DpnI	GATC	8 cut(s)	16, 20, 163, 516, 520, 1040, 1274, 1371
DpnII	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
EaeI	YGGCCR	1 cut(s)	651
Eam1104I	CTCTTC	1 cut(s)	566
EarI	CTCTTC	1 cut(s)	566
Eco130I	CCWWGG	2 cut(s)	654, 1317
Eco24I	GRGCYC	3 cut(s)	427, 806, 1632
Eco31I	GGTCTC	1 cut(s)	716
Eco47I	GGWCC	7 cut(s)	289, 457, 810, 898, 955, 1010, 1134
Eco57I	CTGAAG	3 cut(s)	252, 564, 1434
Eco91I	GGTNACC	1 cut(s)	658
EcoO109I	RGGNCCY	3 cut(s)	423, 424, 1010
EcoO65I	GGTNACC	1 cut(s)	658
EcoRI	GAATTC	1 cut(s)	781
EcoRII	CCWGG	3 cut(s)	806, 1620, 1685
EcoT14I	CCWWGG	2 cut(s)	654, 1317
EcoT22I	ATGCAT	1 cut(s)	335
EcoT38I	GRGCYC	3 cut(s)	427, 806, 1632
EgeI	GGCGCC	1 cut(s)	282
EheI	GGCGCC	1 cut(s)	282
ErhI	CCWWGG	2 cut(s)	654, 1317
FaeI	CATG	8 cut(s)	296, 333, 658, 932, 1253, 1298, 1597, 1718
FalI	AAGNNNNNCTT	4 cut(s)	444, 476, 563, 595
FaqI	GGGAC	1 cut(s)	996
FatI	CATG	8 cut(s)	292, 329, 654, 928, 1249, 1294, 1593, 1714
FblI	GTMKAC	1 cut(s)	860
Fnu4HI	GCNGC	7 cut(s)	8, 71, 158, 321, 681, 942, 1289
FokI	GGATG	3 cut(s)	239, 1193, 1319
FriOI	GRGCYC	3 cut(s)	427, 806, 1632
Fsp4HI	GCNGC	7 cut(s)	8, 71, 158, 321, 681, 942, 1289
FspBI	CTAG	3 cut(s)	149, 179, 872
GlaI	GCGC	3 cut(s)	282, 491, 497
GluI	GCNGC	7 cut(s)	8, 71, 158, 321, 681, 942, 1289
GsaI	CCCAGC	1 cut(s)	1017
GsuI	CTGGAG	1 cut(s)	1643
HaeII	RGCGCY	3 cut(s)	284, 493, 499
HaeIII	GGCC	5 cut(s)	173, 425, 653, 1467, 1685
HapII	CCGG	2 cut(s)	726, 1468
HhaI	GCGC	3 cut(s)	283, 492, 498
Hin1I	GRCGYC	1 cut(s)	281
Hin1II	CATG	8 cut(s)	296, 333, 658, 932, 1253, 1298, 1597, 1718
Hin6I	GCGC	3 cut(s)	281, 490, 496
HinP1I	GCGC	3 cut(s)	281, 490, 496
HindIII	AAGCTT	1 cut(s)	1457
HpaII	CCGG	2 cut(s)	726, 1468
HphI	GGTGA	3 cut(s)	156, 652, 1666
Hpy166II	GTNNAC	6 cut(s)	146, 346, 438, 457, 861, 1085
Hpy188III	TCNNGA	3 cut(s)	230, 373, 1202
Hpy8I	GTNNAC	6 cut(s)	146, 346, 438, 457, 861, 1085
HpyAV	CCTTC	6 cut(s)	227, 414, 542, 845, 979, 1297
HpyCH4III	ACNGT	7 cut(s)	42, 435, 1162, 1448, 1503, 1564, 1644
HpyCH4IV	ACGT	4 cut(s)	30, 86, 1078, 1551
HpyCH4V	TGCA	7 cut(s)	7, 333, 475, 1085, 1253, 1440, 1517
HpyF10VI	GCNNNNNNNGC	3 cut(s)	136, 179, 1112
HpyF3I	CTNAG	7 cut(s)	273, 386, 915, 1053, 1362, 1385, 1494
HpySE526I	ACGT	4 cut(s)	30, 86, 1078, 1551
Hsp92I	GRCGYC	1 cut(s)	281
Hsp92II	CATG	8 cut(s)	296, 333, 658, 932, 1253, 1298, 1597, 1718
HspAI	GCGC	3 cut(s)	281, 490, 496
KasI	GGCGCC	1 cut(s)	280
KroI	GCCGGC	1 cut(s)	1467
KroNI	GCCGGC	1 cut(s)	1469
Kzo9I	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
LmnI	GCTCC	2 cut(s)	144, 809
Lsp1109I	GCAGC	7 cut(s)	19, 82, 169, 332, 692, 928, 1275
LweI	GCATC	4 cut(s)	261, 1093, 1359, 1449
MaeI	CTAG	3 cut(s)	149, 179, 872
MaeII	ACGT	4 cut(s)	30, 86, 1078, 1551
MaeIII	GTNAC	8 cut(s)	575, 658, 1297, 1408, 1432, 1497, 1644, 1654
MalI	GATC	8 cut(s)	16, 20, 163, 516, 520, 1040, 1274, 1371
MboI	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
MboII	GAAGA	8 cut(s)	413, 498, 531, 557, 583, 1271, 1427, 1561
MfeI	CAATTG	1 cut(s)	1701
MhlI	GDGCHC	7 cut(s)	80, 427, 806, 1087, 1341, 1632, 1697
Mly113I	GGCGCC	1 cut(s)	281
MlyI	GAGTC	2 cut(s)	583, 799
MmeI	TCCRAC	3 cut(s)	511, 756, 1158
Mph1103I	ATGCAT	1 cut(s)	335
MroNI	GCCGGC	1 cut(s)	1467
MroXI	GAANNNNTTC	1 cut(s)	538
MseI	TTAA	8 cut(s)	44, 210, 258, 501, 879, 990, 1097, 1236
MslI	CAYNNNNRTG	2 cut(s)	933, 1378
MspI	CCGG	2 cut(s)	726, 1468
MspR9I	CCNGG	3 cut(s)	808, 1622, 1687
MunI	CAATTG	1 cut(s)	1701
Mva1269I	GAATGC	3 cut(s)	217, 1017, 1607
MvaI	CCWGG	3 cut(s)	808, 1622, 1687
MwoI	GCNNNNNNNGC	3 cut(s)	136, 179, 1112
NaeI	GCCGGC	1 cut(s)	1469
NarI	GGCGCC	1 cut(s)	281
NcoI	CCATGG	1 cut(s)	654
NdeII	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
NgoMIV	GCCGGC	1 cut(s)	1467
NlaIII	CATG	8 cut(s)	296, 333, 658, 932, 1253, 1298, 1597, 1718
NlaIV	GGNNCC	6 cut(s)	282, 425, 730, 805, 957, 1012
NmuCI	GTSAC	3 cut(s)	575, 658, 1654
NsiI	ATGCAT	1 cut(s)	335
NspI	RCATGY	2 cut(s)	333, 1253
NspV	TTCGAA	1 cut(s)	1524
PctI	GAATGC	3 cut(s)	217, 1017, 1607
PdiI	GCCGGC	1 cut(s)	1469
PdmI	GAANNNNTTC	1 cut(s)	538
PfeI	GAWTC	9 cut(s)	119, 226, 359, 647, 1004, 1190, 1198, 1262, 1331
PfoI	TCCNGGA	1 cut(s)	806
PinAI	ACCGGT	1 cut(s)	725
PkrI	GCNGC	7 cut(s)	9, 72, 159, 322, 682, 943, 1290
PleI	GAGTC	2 cut(s)	582, 798
PluTI	GGCGCC	1 cut(s)	284
PpsI	GAGTC	2 cut(s)	582, 798
PpuMI	RGGWCCY	1 cut(s)	1010
PshAI	GACNNNNGTC	1 cut(s)	1565
PshBI	ATTAAT	1 cut(s)	1097
PsiI	TTATAA	1 cut(s)	969
Psp1406I	AACGTT	1 cut(s)	86
Psp5II	RGGWCCY	1 cut(s)	1010
Psp6I	CCWGG	3 cut(s)	806, 1620, 1685
PspEI	GGTNACC	1 cut(s)	658
PspFI	CCCAGC	1 cut(s)	1013
PspGI	CCWGG	3 cut(s)	806, 1620, 1685
PspN4I	GGNNCC	6 cut(s)	282, 425, 730, 805, 957, 1012
PspOMI	GGGCCC	1 cut(s)	423
PspPPI	RGGWCCY	1 cut(s)	1010
PstNI	CAGNNNCTG	1 cut(s)	686
RsaI	GTAC	6 cut(s)	437, 667, 922, 1142, 1167, 1619
RsaNI	GTAC	6 cut(s)	436, 666, 921, 1141, 1166, 1618
RseI	CAYNNNNRTG	2 cut(s)	933, 1378
SaqAI	TTAA	8 cut(s)	44, 210, 258, 501, 879, 990, 1097, 1236
SatI	GCNGC	7 cut(s)	8, 71, 158, 321, 681, 942, 1289
Sau3AI	GATC	8 cut(s)	14, 18, 161, 514, 518, 1038, 1272, 1369
ScaI	AGTACT	3 cut(s)	667, 922, 1142
SchI	GAGTC	2 cut(s)	583, 799
ScrFI	CCNGG	3 cut(s)	808, 1622, 1687
SduI	GDGCHC	7 cut(s)	80, 427, 806, 1087, 1341, 1632, 1697
SfaNI	GCATC	4 cut(s)	261, 1093, 1359, 1449
SfcI	CTRYAG	2 cut(s)	363, 1065
SfoI	GGCGCC	1 cut(s)	282
SfuI	TTCGAA	1 cut(s)	1524
SinI	GGWCC	7 cut(s)	289, 457, 810, 898, 955, 1010, 1134
SmiMI	CAYNNNNRTG	2 cut(s)	933, 1378
SmlI	CTYRAG	2 cut(s)	1169, 1345
SmoI	CTYRAG	2 cut(s)	1169, 1345
SspDI	GGCGCC	1 cut(s)	280
SspMI	CTAG	3 cut(s)	149, 179, 872
StyD4I	CCNGG	3 cut(s)	806, 1620, 1685
StyI	CCWWGG	2 cut(s)	654, 1317
TaaI	ACNGT	7 cut(s)	42, 435, 1162, 1448, 1503, 1564, 1644
TaiI	ACGT	4 cut(s)	33, 89, 1081, 1554
TaqI	TCGA	8 cut(s)	17, 80, 517, 1196, 1227, 1524, 1581, 1672
TatI	WGTACW	5 cut(s)	435, 665, 920, 1140, 1165
TfiI	GAWTC	9 cut(s)	119, 226, 359, 647, 1004, 1190, 1198, 1262, 1331
Tru1I	TTAA	8 cut(s)	44, 210, 258, 501, 879, 990, 1097, 1236
Tru9I	TTAA	8 cut(s)	44, 210, 258, 501, 879, 990, 1097, 1236
TscAI	CASTG	5 cut(s)	228, 742, 825, 952, 1346
TseFI	GTSAC	3 cut(s)	575, 658, 1654
TseI	GCWGC	7 cut(s)	7, 70, 157, 320, 680, 941, 1288
Tsp45I	GTSAC	3 cut(s)	575, 658, 1654
TspDTI	ATGAA	5 cut(s)	479, 705, 794, 1283, 1344
TspGWI	ACGGA	1 cut(s)	131
TspRI	CASTG	5 cut(s)	228, 742, 825, 952, 1346
VneI	GTGCAC	1 cut(s)	1083
VpaK11BI	GGWCC	7 cut(s)	289, 457, 810, 898, 955, 1010, 1134
VspI	ATTAAT	1 cut(s)	1097
XapI	RAATTY	8 cut(s)	376, 409, 715, 755, 781, 844, 1425, 1674
XceI	RCATGY	2 cut(s)	333, 1253
XmiI	GTMKAC	1 cut(s)	860
XmnI	GAANNNNTTC	1 cut(s)	538
XspI	CTAG	3 cut(s)	149, 179, 872
ZrmI	AGTACT	3 cut(s)	667, 922, 1142
Zsp2I	ATGCAT	1 cut(s)	335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.