Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr1

Orthogroup ID

OG0001111

Physical Location & Seq

Genomic Coordinates Forward (+)

18352308 .. 18365505

Gene Structure 13198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw1G008500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2991 bp

ATGGCCGGAGTGGAGCGCCTCCACCAGCTTCTCAAAGCTTTCAAGAAGAGCCTCACTTTGCCGGAGGTCACCGCCCTTGACGATTGCTGTATGGATCTTCTCAAGGACAGCAACTTCCGAGTCTCCCAGGGCACTCTTCAGGCCCTTGCCTCTGCCGCCGTCCTCTCGGCGACCATCTCAAACTCCATTTCAATGAGTTTGTCCCCGCCGTTGTCGAGCGCGGAAACTGATCCAACTGTAAAATCTGCAGACCCTATAAAAGTTTATTCTGAAAAGGAACTAATAAGAGAAGTGGAGAAAATAGCTTCTACCCTTGTACCAGAGAAAGACTGGTCAAGGATTGCTGCAATGCAGATAGAAGGGCTTGTCTATGGAGGTGCTGCTGATTATCAATCATTTCGGGGACTGTTGAAGCTACTTGTGAATCCTCTGAACACACAGCTATCTGATCAAAGGTCTAGCATAGTGAAGCAGGCTTGCCATCTGTTATGCTCTTTGTCCAAGGAGCTATCGGGAGATTTTAAGGCATATGCAGAGATTTTCATTCCAGTCCTTTTCAAGCTAGTTGTGATCACTGTACTTGTAATTGCAGAGTCTGCAGATAACTGCATAAAAACGATGTTGCATAACTGTAAAGTTGGTTGGGTGCTCCCTCGTATTGCGGATTGTGCAAAGAATGACCATAATGCAATACTTCGAGCAAAAGAGTATTGGGCCGATGAACCTGAAATACAGAGATCGGCAGATTCGTATGAAGATCTAATAAGATGTTGTGTTGCAGATGCAATGGGCGAGAATGTTTTCAAAAACCTGGCCAGAGCGTTAGAGCATTCCCGACGACTATTTTTACAATTTGATCCCGTTATTCAAAGAGTATGTGTTCTTAACCTTAAGGATAATTTGATTCTATTTTGTAGACTTCATCTGTCACAAACGAAGTCACTTGGTAAAGGTACTGAGCGTATTCTGGAAAGTGTGTTGCATGCAAGCGAACAGAAGGTCAGTGCAATTGAAAGCATGCTTAGAGGTTTGGAGTTGTTTGACAGACATAATTCTCCAACTCTCAGGTCTTCTAGTCTGGATATAGGAGTTGACCCTCCATCATCTCATGGTCCACCATTCCCTGCTGCTGTCCAAGTTTCTAATCATCTTTCAAACTCTTTAATGACAGATCCAACCAGCTCAAGTCAAAAAGGTAGTAACCGCAATGGTGGCCTGGTTTTGTTTGATATCATTATGCAAATTCAAGTATCGCAGGCTTCTGAGAGAATCCACGAAATGAGTTTCATTGAAGAGAATACTGACTGTAGGGAGGCTGGGCGAACTATGAATCATCAAGCTGACAGGGATTCACATAATAACCATATCCCCAATTTTCAAAGGATATCTGCAGGCAGGGGGAGAAGTTTTGATAATAGCCAGCTCTCACAGGAGATGTTAAATTATGTAGAAGGTCCAGCATTGTTGAATGATGCTCTGGGCGAAGTACTGGGTTCTTCTTCAGACTGGTCCGCCAGGGTTGCTGCATTTAATTATCAAGTCTTTGCTGCAGCAAGGCCAAAAAGGAATCCAAGACACGAGAAAGTAACGAAGTTGTTTTTCCAACACGTGGATGATCCGCGCCACAAAAGTGTAGATTCCCTGTTACCTGCTTTGCTCCGTTCACTACACGAACAGCGATCACCAAAGGCTAAATTAGCTCATTCGGTGAATACTGAAGGTTCTGGTAATAGTGGCATCCTAAAATTATGGCTTTCGAAGTTGACATCATTGGTCCATGATAAAAACACTAAACTAAGGGAGGCAGCTGTTGCATGCATAATCTCTGTGTACTTCCACTTTGATCCAACATCTGTCTTGAATTTTATTCTTATCTTGTCCGTTGAAGAACAAAATTCTTTGAGAAGAGCCTTGAAACAAAGTACTCCTCGCATCAAAGTGGACCTAATGAACTTTTTGCAAGACAAGAAAGAGCAACAGCGCAACTCTTCCTATGATCCGTCTGATGCAGTCGGAACATCTTCCGAAGAAGGATACGTTATTGCTTCAAAGAAGAGTCACTTCATTGGGAGGTATTCAGCTGGTTCAGTTGATAGTGATGGTGGCAGGAAATGGAGTTTAACCCATGAAACAGGCTTGGTCACTGGCTCGGTTGGGCAAGCAGCTTCTGATCAGACTGGGGAAAACTTGTATCAGAATTTTGAGACTGATTCTAACATTGATGTTCTCGGTGCAAAATCCAAGGATCCAACTTACACTATCAGTGCCATGAATCAGAGCTCTGACCAGAATCACCACCTACTTAAAGCTTTAAAGGTTAATTCCATTCCAGACTCGGGTCCCAGCATTCCTCAGATACTCCATCTGATTAGCACTGGAACTGAGGAAAGACCTGCAGAAAGCAAGCGTGGTGCAGTTCAACAGCTAGTCGAAGCTGCAATAACTAGTGACCACTCTATTTGGACCAAGTACTTCAATCAAATTTTGACAGTTGTACTTGAGGTGTTGGATGATTTTGACTGCTCCATCTGGGAGCTCTCATTATTGAAAAGCTTAAGAACCAGGTTTGTTATTTACTTTAAAGCTGCAATTGAAGACTCTATTGAGATCATAATTGAGATGCTGCTGCATGTTACAAAGGAGACTTGGTTCCCCAGAGCACTGCTTGTTCTGTCGCTATATGATCCGTTCAGATGTTTAAGTGTCGTTGTCCCTTTATTGGTAACTGAAGATGAGAAAACTCTTGTTTTTAGCATAAACTGTTCGACAAAGCTTGTAGGCAAGCTTTCACAGGAGGAACTAATGGCCCAATTACCATCTTTTCTGCCTGCATTGAAGTGTTTGGAAGCCAGATGCAATCTATGCCGTGCTTTGCGGACTGGTTTCTTCTGTTCAGTTGATATACATATATCATGCTTGGAAAAGCGTTCTTGCCATATCTGGAGGGGCTTAACAACACAGTTACGGTTGGTGACTATTTATGCTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000902 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0005886 GO:0005911 GO:0005938 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007026 GO:0007049 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009653 GO:0009826 GO:0009987 GO:0010639 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0022607 GO:0030054 GO:0030865 GO:0031023 GO:0031109 GO:0031110 GO:0031111 GO:0031114 GO:0031122 GO:0031647 GO:0032502 GO:0032886 GO:0032989 GO:0033043 GO:0034453 GO:0034622 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046785 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050821 GO:0051010 GO:0051128 GO:0051129 GO:0051258 GO:0051302 GO:0051493 GO:0051494 GO:0051781 GO:0055044 GO:0060560 GO:0065003 GO:0065007 GO:0065008 GO:0070507 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CLASP_N HEAT Vac14_Fab1_bd

Protein Analysis

996

Amino Acids

110.73

Weight (kDa)

6.6

Isoelectric Point (pI)

41.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CLASP_N	PF12348	96 - 263	9.5e-19	CLASP N terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20190
fragaria_vesca	FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_4g18130
malus_domestica	MD05G1182800.v1.1 MD10G1170900.v1.1
prunus_persica	Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1
pyrus_communis	pycom05g16790 pycom10g14730
rosa_chinensis	RchiOBHm_Chr1g0330771 RchiOBHm_Chr1g0330781 RchiOBHm_Chr1g0330801 RchiOBHm_Chr6g0285551
rosa_laevigata	RLG00000012628 RLG00000029789 RLG00000029790 RLG00000029796
rosa_multiflora	Rmu_co8432325.1_g000001 Rmu_sc0000723.1_g000001 Rmu_sc0000723.1_g000002 Rmu_sc0001491.1_g000006 Rmu_sc0002725.1_g000020 Rmu_sc0012495.1_g000004 Rmu_sc0017770.1_g000001 Rmu_sc0031058.1_g000001
rosa_roxburghii	Rroxscaffold_4G00319710 Rroxscaffold_4G00319750 Rroxscaffold_4G00319790 Rroxscaffold_4G00319800 Rroxscaffold_4G00319810 Rroxscaffold_7G00183030
rosa_rugosa	Rorug06G0175400
rosa_samantha	Rh1AG108200 Rh1AG109200 Rh1AG110500 Rh1AG111400 Rh1CG105100 Rh1CG105400 Rh1CG105500 Rh1CG106800 Rh2BG359900 Rh2DG376700 Rh4CG127100 Rh6AG287000 Rh6BG288200 Rh6CG289400 Rh6DG282200
rosa_wichuraiana	Rw0G004360 Rw1G008500 Rw1G008580 Rw1G008750 Rw1G008840 Rw6G024670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1657, 2401
AccB7I	CCANNNNNTGG	1 cut(s)	1609
AccI	GTMKAC	1 cut(s)	916
AccII	CGCG	2 cut(s)	221, 1621
AciI	CCGC	9 cut(s)	72, 156, 206, 221, 662, 1204, 1512, 1619, 2875
AcoI	YGGCCR	2 cut(s)	3, 813
AcsI	RAATTY	5 cut(s)	1242, 1861, 1894, 2197, 2481
AcuI	CTGAAG	4 cut(s)	122, 1485, 1737, 2748
AcvI	CACGTG	1 cut(s)	1609
AfaI	GTAC	8 cut(s)	318, 579, 955, 1488, 1832, 1924, 2471, 2496
AfiI	CCNNNNNNNGG	3 cut(s)	1609, 2336, 2719
AflII	CTTAAG	2 cut(s)	890, 2554
AflIII	ACRYGT	1 cut(s)	1606
AhlI	ACTAGT	1 cut(s)	2444
AjnI	CCWGG	5 cut(s)	126, 810, 1215, 1514, 2561
AleI	CACNNNNGTG	1 cut(s)	1629
AloI	GAACNNNNNNTCC	2 cut(s)	2633, 2665
Alw21I	GWGCWC	4 cut(s)	651, 2282, 2538, 2662
Alw26I	GTCTC	3 cut(s)	127, 2198, 2636
AlwNI	CAGNNNCTG	2 cut(s)	596, 2168
Ama87I	CYCGRG	1 cut(s)	2335
AoxI	GGCC	7 cut(s)	3, 141, 714, 813, 1213, 1556, 2805
ApoI	RAATTY	5 cut(s)	1242, 1861, 1894, 2197, 2481
ArsI	GACNNNNNNTTYG	2 cut(s)	984, 1016
Asp700I	GAANNNNTTC	2 cut(s)	800, 2020
AspLEI	GCGC	4 cut(s)	18, 221, 1623, 1983
AsuHPI	GGTGA	5 cut(s)	61, 1674, 1720, 2285, 2983
AsuII	TTCGAA	1 cut(s)	1757
AvaI	CYCGRG	1 cut(s)	2335
AvaII	GGWCC	7 cut(s)	1112, 1454, 1509, 1774, 1942, 2339, 2463
BaeGI	GKGCMC	1 cut(s)	134
BaeI	ACNNNNGTAYC	2 cut(s)	300, 333
BalI	TGGCCA	1 cut(s)	815
BamHI	GGATCC	1 cut(s)	2245
BanII	GRGCYC	2 cut(s)	2282, 2538
BauI	CACGAG	1 cut(s)	1577
BbrPI	CACGTG	1 cut(s)	1609
BbsI	GAAGAC	2 cut(s)	1062, 2601
Bbv12I	GWGCWC	4 cut(s)	651, 2282, 2538, 2662
BccI	CCATC	7 cut(s)	182, 489, 1108, 2093, 2370, 2534, 2824
BceAI	ACGGC	3 cut(s)	143, 193, 2850
BciT130I	CCWGG	5 cut(s)	128, 812, 1217, 1516, 2563
BciVI	GTATCC	1 cut(s)	2027
BclI	TGATCA	3 cut(s)	448, 570, 2170
BcoDI	GTCTC	3 cut(s)	127, 2198, 2636
BcuI	ACTAGT	1 cut(s)	2444
BfaI	CTAG	5 cut(s)	459, 563, 1074, 2426, 2445
BfmI	CTRYAG	6 cut(s)	246, 597, 1306, 1389, 1548, 2394
BfoI	RGCGCY	1 cut(s)	19
BfrI	CTTAAG	2 cut(s)	890, 2554
BfuAI	ACCTGC	2 cut(s)	1657, 2401
BfuI	GTATCC	1 cut(s)	2027
BglII	AGATCT	1 cut(s)	757
BmcAI	AGTACT	3 cut(s)	1488, 1924, 2471
Bme1390I	CCNGG	5 cut(s)	128, 812, 1217, 1516, 2563
Bme18I	GGWCC	7 cut(s)	1112, 1454, 1509, 1774, 1942, 2339, 2463
BmeT110I	CYCGRG	1 cut(s)	2335
BmiI	GGNNCC	4 cut(s)	2247, 2340, 2341, 2651
BmrFI	CCNGG	5 cut(s)	128, 812, 1217, 1516, 2563
BmrI	ACTGGG	2 cut(s)	1499, 2187
BmsI	GCATC	7 cut(s)	772, 1462, 1746, 1941, 1996, 2610, 2843
BmuI	ACTGGG	2 cut(s)	1499, 2187
BoxI	GACNNNNGTC	1 cut(s)	2337
BpiI	GAAGAC	2 cut(s)	1062, 2601
BpmI	CTGGAG	1 cut(s)	2962
Bpu14I	TTCGAA	1 cut(s)	1757
BpuEI	CTTGAG	3 cut(s)	86, 1168, 2519
BsaAI	YACGTR	1 cut(s)	1609
BsaJI	CCNNGG	5 cut(s)	126, 127, 501, 1515, 2241
BsaXI	ACNNNNNCTCC	2 cut(s)	2633, 2663
Bsc4I	CCNNNNNNNGG	3 cut(s)	1609, 2336, 2719
Bse1I	ACTGG	8 cut(s)	335, 548, 1494, 1511, 2149, 2182, 2380, 2884
Bse3DI	GCAATG	3 cut(s)	354, 792, 1213
BseBI	CCWGG	5 cut(s)	128, 812, 1217, 1516, 2563
BseDI	CCNNGG	5 cut(s)	126, 127, 501, 1515, 2241
BseGI	GGATG	3 cut(s)	1618, 1737, 2515
BseLI	CCNNNNNNNGG	3 cut(s)	1609, 2336, 2719
BseMI	GCAATG	3 cut(s)	354, 792, 1213
BseMII	CTCAG	5 cut(s)	948, 1078, 1254, 2366, 2373
BseNI	ACTGG	8 cut(s)	335, 548, 1494, 1511, 2149, 2182, 2380, 2884
BseRI	GAGGAG	1 cut(s)	1917
BseSI	GKGCMC	1 cut(s)	134
BseYI	CCCAGC	2 cut(s)	1316, 2342
BsgI	GTGCAG	1 cut(s)	2433
Bsh1236I	CGCG	2 cut(s)	221, 1621
BshFI	GGCC	7 cut(s)	5, 143, 716, 815, 1215, 1558, 2807
BsiHKAI	GWGCWC	4 cut(s)	651, 2282, 2538, 2662
BsiHKCI	CYCGRG	1 cut(s)	2335
BsiSI	CCGG	2 cut(s)	6, 62
BslFI	GGGAC	4 cut(s)	187, 417, 2325, 2696
BslI	CCNNNNNNNGG	3 cut(s)	1609, 2336, 2719
BsmAI	GTCTC	3 cut(s)	127, 2198, 2636
BsmFI	GGGAC	4 cut(s)	187, 417, 2325, 2696
BsmI	GAATGC	2 cut(s)	829, 2346
BsnI	GGCC	7 cut(s)	5, 143, 716, 815, 1215, 1558, 2807
BsoBI	CYCGRG	1 cut(s)	2335
Bsp119I	TTCGAA	1 cut(s)	1757
Bsp1286I	GDGCHC	5 cut(s)	134, 651, 2282, 2538, 2662
BspACI	CCGC	9 cut(s)	72, 156, 206, 221, 662, 1204, 1512, 1619, 2875
BspANI	GGCC	7 cut(s)	5, 143, 716, 815, 1215, 1558, 2807
BspCNI	CTCAG	5 cut(s)	949, 1077, 1255, 2365, 2374
BspFNI	CGCG	2 cut(s)	221, 1621
BspLI	GGNNCC	4 cut(s)	2247, 2340, 2341, 2651
BspMAI	CTGCAG	5 cut(s)	250, 601, 1393, 1552, 2398
BspMI	ACCTGC	2 cut(s)	1657, 2401
BspQI	GCTCTTC	2 cut(s)	41, 1900
BspT104I	TTCGAA	1 cut(s)	1757
BspTI	CTTAAG	2 cut(s)	890, 2554
BsrDI	GCAATG	3 cut(s)	354, 792, 1213
BsrI	ACTGG	8 cut(s)	335, 548, 1494, 1511, 2149, 2182, 2380, 2884
BssECI	CCNNGG	5 cut(s)	126, 127, 501, 1515, 2241
BssSI	CACGAG	1 cut(s)	1577
BssT1I	CCWWGG	2 cut(s)	501, 2241
Bst2BI	CACGAG	1 cut(s)	1577
Bst2UI	CCWGG	5 cut(s)	128, 812, 1217, 1516, 2563
Bst4CI	ACNGT	9 cut(s)	238, 408, 577, 632, 1307, 2491, 2762, 2961, 2967
Bst6I	CTCTTC	6 cut(s)	41, 141, 1287, 1900, 1993, 2048
BstAFI	CTTAAG	2 cut(s)	890, 2554
BstAPI	GCANNNNNTGC	3 cut(s)	596, 1811, 2862
BstBAI	YACGTR	1 cut(s)	1609
BstBI	TTCGAA	1 cut(s)	1757
BstDEI	CTNAG	7 cut(s)	957, 1022, 1064, 1263, 1796, 2352, 2382
BstEII	GGTNACC	1 cut(s)	67
BstF5I	GGATG	3 cut(s)	1618, 1737, 2515
BstFNI	CGCG	2 cut(s)	221, 1621
BstH2I	RGCGCY	1 cut(s)	19
BstHHI	GCGC	4 cut(s)	18, 221, 1623, 1983
BstMAI	GTCTC	3 cut(s)	127, 2198, 2636
BstMWI	GCNNNNNNNGC	8 cut(s)	155, 596, 668, 1212, 1520, 1697, 1811, 2862
BstNI	CCWGG	5 cut(s)	128, 812, 1217, 1516, 2563
BstNSI	RCATGY	4 cut(s)	986, 1021, 1818, 2633
BstPAI	GACNNNNGTC	1 cut(s)	2337
BstPI	GGTNACC	1 cut(s)	67
BstSCI	CCNGG	5 cut(s)	126, 810, 1215, 1514, 2561
BstSFI	CTRYAG	6 cut(s)	246, 597, 1306, 1389, 1548, 2394
BstSLI	GKGCMC	1 cut(s)	134
BstUI	CGCG	2 cut(s)	221, 1621
BstV2I	GAAGAC	2 cut(s)	1062, 2601
BstX2I	RGATCY	4 cut(s)	94, 757, 1171, 2245
BstYI	RGATCY	4 cut(s)	94, 757, 1171, 2245
BsuI	GTATCC	1 cut(s)	2027
BsuRI	GGCC	7 cut(s)	5, 143, 716, 815, 1215, 1558, 2807
BtsCI	GGATG	3 cut(s)	1618, 1737, 2515
BtsI	GCAGTG	1 cut(s)	2660
BtsIMutI	CAGTG	6 cut(s)	573, 1009, 2142, 2269, 2373, 2660
BveI	ACCTGC	2 cut(s)	1657, 2401
CaiI	CAGNNNCTG	2 cut(s)	596, 2168
CfoI	GCGC	4 cut(s)	18, 221, 1623, 1983
CsiI	ACCWGGT	1 cut(s)	2561
Csp6I	GTAC	8 cut(s)	317, 578, 954, 1487, 1831, 1923, 2470, 2495
CspCI	CAANNNNNGTGG	2 cut(s)	2441, 2476
CviAII	CATG	9 cut(s)	983, 1018, 1109, 1778, 1815, 2126, 2269, 2630, 2913
CviQI	GTAC	8 cut(s)	317, 578, 954, 1487, 1831, 1923, 2470, 2495
DdeI	CTNAG	7 cut(s)	957, 1022, 1064, 1263, 1796, 2352, 2382
DraI	TTTAAA	2 cut(s)	2313, 2581
EaeI	YGGCCR	2 cut(s)	3, 813
Eam1104I	CTCTTC	6 cut(s)	41, 141, 1287, 1900, 1993, 2048
EarI	CTCTTC	6 cut(s)	41, 141, 1287, 1900, 1993, 2048
EciI	GGCGGA	1 cut(s)	1501
Ecl136II	GAGCTC	2 cut(s)	2280, 2536
Eco130I	CCWWGG	2 cut(s)	501, 2241
Eco24I	GRGCYC	2 cut(s)	2282, 2538
Eco32I	GATATC	2 cut(s)	1231, 1386
Eco47I	GGWCC	7 cut(s)	1112, 1454, 1509, 1774, 1942, 2339, 2463
Eco53kI	GAGCTC	2 cut(s)	2280, 2536
Eco57I	CTGAAG	4 cut(s)	122, 1485, 1737, 2748
Eco72I	CACGTG	1 cut(s)	1609
Eco88I	CYCGRG	1 cut(s)	2335
Eco91I	GGTNACC	1 cut(s)	67
EcoICRI	GAGCTC	2 cut(s)	2280, 2536
EcoO109I	RGGNCCY	2 cut(s)	142, 2339
EcoO65I	GGTNACC	1 cut(s)	67
EcoRII	CCWGG	5 cut(s)	126, 810, 1215, 1514, 2561
EcoRV	GATATC	2 cut(s)	1231, 1386
EcoT14I	CCWWGG	2 cut(s)	501, 2241
EcoT22I	ATGCAT	1 cut(s)	1820
EcoT38I	GRGCYC	2 cut(s)	2282, 2538
ErhI	CCWWGG	2 cut(s)	501, 2241
FaeI	CATG	9 cut(s)	986, 1021, 1112, 1781, 1818, 2129, 2272, 2633, 2916
FalI	AAGNNNNNCTT	2 cut(s)	2045, 2077
FaqI	GGGAC	4 cut(s)	187, 417, 2325, 2696
FatI	CATG	9 cut(s)	982, 1017, 1108, 1777, 1814, 2125, 2268, 2629, 2912
FauI	CCCGC	1 cut(s)	213
FauNDI	CATATG	1 cut(s)	529
FbaI	TGATCA	3 cut(s)	448, 570, 2170
FblI	GTMKAC	1 cut(s)	916
FokI	GGATG	3 cut(s)	1625, 1724, 2522
FriOI	GRGCYC	2 cut(s)	2282, 2538
FspBI	CTAG	5 cut(s)	459, 563, 1074, 2426, 2445
GlaI	GCGC	4 cut(s)	17, 220, 1622, 1982
GsaI	CCCAGC	2 cut(s)	1320, 2346
GsuI	CTGGAG	1 cut(s)	2962
HaeII	RGCGCY	1 cut(s)	19
HaeIII	GGCC	7 cut(s)	5, 143, 716, 815, 1215, 1558, 2807
HapII	CCGG	2 cut(s)	6, 62
HhaI	GCGC	4 cut(s)	18, 221, 1623, 1983
Hin1II	CATG	9 cut(s)	986, 1021, 1112, 1781, 1818, 2129, 2272, 2633, 2916
Hin6I	GCGC	4 cut(s)	16, 219, 1621, 1981
HinP1I	GCGC	4 cut(s)	16, 219, 1621, 1981
HincII	GTYRAC	2 cut(s)	1093, 1764
HindII	GTYRAC	2 cut(s)	1093, 1764
HindIII	AAGCTT	5 cut(s)	36, 2307, 2551, 2771, 2783
HpaII	CCGG	2 cut(s)	6, 62
HphI	GGTGA	5 cut(s)	61, 1674, 1720, 2285, 2983
Hpy166II	GTNNAC	7 cut(s)	917, 1093, 1115, 1664, 1764, 1831, 1942
Hpy188III	TCNNGA	8 cut(s)	43, 513, 834, 968, 1079, 1858, 2330, 2941
Hpy8I	GTNNAC	7 cut(s)	917, 1093, 1115, 1664, 1764, 1831, 1942
Hpy99I	CGWCG	1 cut(s)	840
HpyAV	CCTTC	5 cut(s)	353, 991, 1445, 1712, 2024
HpyCH4III	ACNGT	9 cut(s)	238, 408, 577, 632, 1307, 2491, 2762, 2961, 2967
HpyCH4IV	ACGT	2 cut(s)	1608, 2037
HpyF10VI	GCNNNNNNNGC	8 cut(s)	155, 596, 668, 1212, 1520, 1697, 1811, 2862
HpyF3I	CTNAG	7 cut(s)	957, 1022, 1064, 1263, 1796, 2352, 2382
HpySE526I	ACGT	2 cut(s)	1608, 2037
Hsp92II	CATG	9 cut(s)	986, 1021, 1112, 1781, 1818, 2129, 2272, 2633, 2916
HspAI	GCGC	4 cut(s)	16, 219, 1621, 1981
KflI	GGGWCCC	1 cut(s)	2339
Ksp22I	TGATCA	3 cut(s)	448, 570, 2170
LguI	GCTCTTC	2 cut(s)	41, 1900
LmnI	GCTCC	6 cut(s)	13, 505, 654, 1662, 2528, 2533
LweI	GCATC	7 cut(s)	772, 1462, 1746, 1941, 1996, 2610, 2843
MabI	ACCWGGT	1 cut(s)	2561
MaeI	CTAG	5 cut(s)	459, 563, 1074, 2426, 2445
MaeII	ACGT	2 cut(s)	1608, 2037
MfeI	CAATTG	2 cut(s)	1008, 2589
MflI	RGATCY	4 cut(s)	94, 757, 1171, 2245
MhlI	GDGCHC	5 cut(s)	134, 651, 2282, 2538, 2662
MlsI	TGGCCA	1 cut(s)	815
MluNI	TGGCCA	1 cut(s)	815
MlyI	GAGTC	5 cut(s)	129, 602, 2065, 2327, 2591
MmeI	TCCRAC	8 cut(s)	257, 1082, 1199, 1627, 1871, 1993, 2273, 2487
Mox20I	TGGCCA	1 cut(s)	815
Mph1103I	ATGCAT	1 cut(s)	1820
MroXI	GAANNNNTTC	2 cut(s)	800, 2020
MscI	TGGCCA	1 cut(s)	815
MslI	CAYNNNNRTG	5 cut(s)	191, 1611, 1629, 1937, 2836
Msp20I	TGGCCA	1 cut(s)	815
MspA1I	CMGCKG	2 cut(s)	1808, 2081
MspCI	CTTAAG	2 cut(s)	890, 2554
MspI	CCGG	2 cut(s)	6, 62
MspR9I	CCNGG	5 cut(s)	128, 812, 1217, 1516, 2563
MunI	CAATTG	2 cut(s)	1008, 2589
Mva1269I	GAATGC	2 cut(s)	829, 2346
MvaI	CCWGG	5 cut(s)	128, 812, 1217, 1516, 2563
MvnI	CGCG	2 cut(s)	221, 1621
MwoI	GCNNNNNNNGC	8 cut(s)	155, 596, 668, 1212, 1520, 1697, 1811, 2862
NdeI	CATATG	1 cut(s)	529
NlaIII	CATG	9 cut(s)	986, 1021, 1112, 1781, 1818, 2129, 2272, 2633, 2916
NlaIV	GGNNCC	4 cut(s)	2247, 2340, 2341, 2651
NmeAIII	GCCGAG	1 cut(s)	146
NmuCI	GTSAC	7 cut(s)	67, 927, 939, 2057, 2140, 2447, 2971
NsiI	ATGCAT	1 cut(s)	1820
NspI	RCATGY	4 cut(s)	986, 1021, 1818, 2633
NspV	TTCGAA	1 cut(s)	1757
OliI	CACNNNNGTG	1 cut(s)	1629
PaeI	GCATGC	3 cut(s)	986, 1021, 1818
PasI	CCCWGGG	1 cut(s)	127
PciSI	GCTCTTC	2 cut(s)	41, 1900
PcsI	WCGNNNNNNNCGW	1 cut(s)	746
PctI	GAATGC	2 cut(s)	829, 2346
PdmI	GAANNNNTTC	2 cut(s)	800, 2020
PflMI	CCANNNNNTGG	1 cut(s)	1609
PleI	GAGTC	5 cut(s)	128, 601, 2064, 2327, 2591
PmaCI	CACGTG	1 cut(s)	1609
PmlI	CACGTG	1 cut(s)	1609
PpsI	GAGTC	5 cut(s)	128, 601, 2064, 2327, 2591
Ppu21I	YACGTR	1 cut(s)	1609
PpuMI	RGGWCCY	1 cut(s)	2339
PshAI	GACNNNNGTC	1 cut(s)	2337
Psp124BI	GAGCTC	2 cut(s)	2282, 2538
Psp5II	RGGWCCY	1 cut(s)	2339
Psp6I	CCWGG	5 cut(s)	126, 810, 1215, 1514, 2561
PspCI	CACGTG	1 cut(s)	1609
PspEI	GGTNACC	1 cut(s)	67
PspFI	CCCAGC	2 cut(s)	1316, 2342
PspGI	CCWGG	5 cut(s)	126, 810, 1215, 1514, 2561
PspN4I	GGNNCC	4 cut(s)	2247, 2340, 2341, 2651
PspPPI	RGGWCCY	1 cut(s)	2339
PsrI	GAACNNNNNNTAC	2 cut(s)	714, 746
PstI	CTGCAG	5 cut(s)	250, 601, 1393, 1552, 2398
PstNI	CAGNNNCTG	2 cut(s)	596, 2168
PsuI	RGATCY	4 cut(s)	94, 757, 1171, 2245
PvuII	CAGCTG	2 cut(s)	1808, 2081
RsaI	GTAC	8 cut(s)	318, 579, 955, 1488, 1832, 1924, 2471, 2496
RsaNI	GTAC	8 cut(s)	317, 578, 954, 1487, 1831, 1923, 2470, 2495
RseI	CAYNNNNRTG	5 cut(s)	191, 1611, 1629, 1937, 2836
SacI	GAGCTC	2 cut(s)	2282, 2538
SapI	GCTCTTC	2 cut(s)	41, 1900
ScaI	AGTACT	3 cut(s)	1488, 1924, 2471
SchI	GAGTC	5 cut(s)	129, 602, 2065, 2327, 2591
ScrFI	CCNGG	5 cut(s)	128, 812, 1217, 1516, 2563
SduI	GDGCHC	5 cut(s)	134, 651, 2282, 2538, 2662
SexAI	ACCWGGT	1 cut(s)	2561
SfaNI	GCATC	7 cut(s)	772, 1462, 1746, 1941, 1996, 2610, 2843
SfcI	CTRYAG	6 cut(s)	246, 597, 1306, 1389, 1548, 2394
SfuI	TTCGAA	1 cut(s)	1757
SinI	GGWCC	7 cut(s)	1112, 1454, 1509, 1774, 1942, 2339, 2463
SmiMI	CAYNNNNRTG	5 cut(s)	191, 1611, 1629, 1937, 2836
SmlI	CTYRAG	5 cut(s)	101, 890, 1183, 2498, 2554
SmoI	CTYRAG	5 cut(s)	101, 890, 1183, 2498, 2554
SpeI	ACTAGT	1 cut(s)	2444
SphI	GCATGC	3 cut(s)	986, 1021, 1818
SsiI	CCGC	9 cut(s)	72, 156, 206, 221, 662, 1204, 1512, 1619, 2875
SspMI	CTAG	5 cut(s)	459, 563, 1074, 2426, 2445
SstI	GAGCTC	2 cut(s)	2282, 2538
StyD4I	CCNGG	5 cut(s)	126, 810, 1215, 1514, 2561
StyI	CCWWGG	2 cut(s)	501, 2241
TaaI	ACNGT	9 cut(s)	238, 408, 577, 632, 1307, 2491, 2762, 2961, 2967
TaiI	ACGT	2 cut(s)	1611, 2040
TaqI	TCGA	5 cut(s)	215, 697, 1757, 2430, 2765
TatI	WGTACW	6 cut(s)	577, 1486, 1830, 1922, 2469, 2494
TauI	GCSGC	1 cut(s)	158
TscAI	CASTG	6 cut(s)	580, 1009, 2149, 2269, 2380, 2667
TseFI	GTSAC	7 cut(s)	67, 927, 939, 2057, 2140, 2447, 2971
Tsp45I	GTSAC	7 cut(s)	67, 927, 939, 2057, 2140, 2447, 2971
TspGWI	ACGGA	4 cut(s)	1649, 1870, 1989, 2676
TspRI	CASTG	6 cut(s)	580, 1009, 2149, 2269, 2380, 2667
Van91I	CCANNNNNTGG	1 cut(s)	1609
Vha464I	CTTAAG	2 cut(s)	890, 2554
VpaK11BI	GGWCC	7 cut(s)	1112, 1454, 1509, 1774, 1942, 2339, 2463
XapI	RAATTY	5 cut(s)	1242, 1861, 1894, 2197, 2481
XceI	RCATGY	4 cut(s)	986, 1021, 1818, 2633
XcmI	CCANNNNNNNNNTGG	1 cut(s)	327
XmiI	GTMKAC	1 cut(s)	916
XmnI	GAANNNNTTC	2 cut(s)	800, 2020
XspI	CTAG	5 cut(s)	459, 563, 1074, 2426, 2445
ZrmI	AGTACT	3 cut(s)	1488, 1924, 2471
Zsp2I	ATGCAT	1 cut(s)	1820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.