Rmu_sc0031058.1_g000001

ribonuclease T2 activity

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0031058.1
Physical Location & Seq
Reverse (-)
1 .. 482
482 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0031058.1_g000001.1.cds

Sequence Viewer

Length: 356 bp
atgcgtagcaatccgaatggggatttttggaaagatgaatacgacaagcatggaacatgcaccgttaaaaaatttcgtacacctgtcgagtacttccagaaggaaaatgacttgtggatagccaacccaatagaggattggtttcggcgtgatggtcgcttcacagatacagatgtccagctcgctgagttgagaggcgcgatcctgaacaagttcggttctatgccatggcttcagtgtcgggacaaatttgtgcggcagataggcttgtgttttgatgaggttggagggctgggtgcgaattgtcctaaagaatatcaaaagaagcaatgtccccctactatacagtatagatt
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

118

Amino Acids

13.94

Weight (kDa)

8.28

Isoelectric Point (pI)

41.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 200
AciI CCGC 1 cut(s) 256
AclWI GGATC 1 cut(s) 196
AcsI RAATTY 2 cut(s) 71, 248
AcuI CTGAAG 1 cut(s) 218
AfaI GTAC 2 cut(s) 79, 92
AfiI CCNNNNNNNGG 1 cut(s) 133
AluBI AGCT 1 cut(s) 181
AluI AGCT 1 cut(s) 181
AlwI GGATC 1 cut(s) 196
ApoI RAATTY 2 cut(s) 71, 248
Asp700I GAANNNNTTC 1 cut(s) 212
AspLEI GCGC 1 cut(s) 200
BaeI ACNNNNGTAYC 2 cut(s) 159, 192
BccI CCATC 1 cut(s) 146
BisI GCNGC 1 cut(s) 257
BlsI GCNGC 1 cut(s) 258
BmcAI AGTACT 1 cut(s) 92
BsaJI CCNNGG 1 cut(s) 227
Bsc4I CCNNNNNNNGG 1 cut(s) 133
Bse3DI GCAATG 1 cut(s) 335
BseDI CCNNGG 1 cut(s) 227
BseLI CCNNNNNNNGG 1 cut(s) 133
BseMI GCAATG 1 cut(s) 335
BseMII CTCAG 1 cut(s) 177
BseYI CCCAGC 1 cut(s) 292
Bsh1236I CGCG 1 cut(s) 200
BslFI GGGAC 2 cut(s) 257, 318
BslI CCNNNNNNNGG 1 cut(s) 133
BsmFI GGGAC 2 cut(s) 257, 318
Bsp143I GATC 1 cut(s) 201
Bsp19I CCATGG 1 cut(s) 227
BspACI CCGC 1 cut(s) 256
BspCNI CTCAG 1 cut(s) 178
BspFNI CGCG 1 cut(s) 200
BspPI GGATC 1 cut(s) 196
BsrDI GCAATG 1 cut(s) 335
BssECI CCNNGG 1 cut(s) 227
BssMI GATC 1 cut(s) 201
BssT1I CCWWGG 1 cut(s) 227
Bst4CI ACNGT 2 cut(s) 64, 348
BstC8I GCNNGC 1 cut(s) 183
BstDEI CTNAG 1 cut(s) 186
BstDSI CCRYGG 1 cut(s) 227
BstFNI CGCG 1 cut(s) 200
BstHHI GCGC 1 cut(s) 200
BstKTI GATC 1 cut(s) 204
BstMBI GATC 1 cut(s) 201
BstNSI RCATGY 1 cut(s) 60
BstUI CGCG 1 cut(s) 200
BtgI CCRYGG 1 cut(s) 227
BtsIMutI CAGTG 1 cut(s) 242
Cac8I GCNNGC 1 cut(s) 183
CfoI GCGC 1 cut(s) 200
Csp6I GTAC 2 cut(s) 78, 91
CviAII CATG 3 cut(s) 50, 57, 228
CviJI RGCY 5 cut(s) 122, 181, 232, 267, 292
CviKI_1 RGCY 5 cut(s) 122, 181, 232, 267, 292
CviQI GTAC 2 cut(s) 78, 91
DdeI CTNAG 1 cut(s) 186
DpnI GATC 1 cut(s) 203
DpnII GATC 1 cut(s) 201
Eco130I CCWWGG 1 cut(s) 227
Eco57I CTGAAG 1 cut(s) 218
EcoT14I CCWWGG 1 cut(s) 227
ErhI CCWWGG 1 cut(s) 227
FaeI CATG 3 cut(s) 53, 60, 231
FaiI YATR 6 cut(s) 51, 58, 224, 229, 344, 351
FaqI GGGAC 2 cut(s) 257, 318
FatI CATG 3 cut(s) 49, 56, 227
Fnu4HI GCNGC 1 cut(s) 257
Fsp4HI GCNGC 1 cut(s) 257
GlaI GCGC 1 cut(s) 199
GluI GCNGC 1 cut(s) 257
GsaI CCCAGC 1 cut(s) 296
HhaI GCGC 1 cut(s) 200
Hin1II CATG 3 cut(s) 53, 60, 231
Hin6I GCGC 1 cut(s) 198
HinP1I GCGC 1 cut(s) 198
Hpy166II GTNNAC 1 cut(s) 80
Hpy188I TCNGA 1 cut(s) 15
Hpy188III TCNNGA 3 cut(s) 97, 205, 242
Hpy8I GTNNAC 1 cut(s) 80
HpyAV CCTTC 1 cut(s) 94
HpyCH4III ACNGT 2 cut(s) 64, 348
HpyCH4V TGCA 1 cut(s) 60
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 3 cut(s) 53, 60, 231
HspAI GCGC 1 cut(s) 198
Kzo9I GATC 1 cut(s) 201
LpnPI CCDG 5 cut(s) 96, 110, 191, 218, 278
MalI GATC 1 cut(s) 203
MboI GATC 1 cut(s) 201
MluCI AATT 3 cut(s) 71, 248, 301
MmeI TCCRAC 1 cut(s) 265
MnlI CCTC 4 cut(s) 127, 188, 274, 281
MroXI GAANNNNTTC 1 cut(s) 212
MseI TTAA 1 cut(s) 66
MvnI CGCG 1 cut(s) 200
NcoI CCATGG 1 cut(s) 227
NdeII GATC 1 cut(s) 201
NlaIII CATG 3 cut(s) 53, 60, 231
NspI RCATGY 1 cut(s) 60
PdmI GAANNNNTTC 1 cut(s) 212
PkrI GCNGC 1 cut(s) 258
PspFI CCCAGC 1 cut(s) 292
RsaI GTAC 2 cut(s) 79, 92
RsaNI GTAC 2 cut(s) 78, 91
SaqAI TTAA 1 cut(s) 66
SatI GCNGC 1 cut(s) 257
Sau3AI GATC 1 cut(s) 201
ScaI AGTACT 1 cut(s) 92
SetI ASST 3 cut(s) 85, 183, 285
Sse9I AATT 3 cut(s) 71, 248, 301
SsiI CCGC 1 cut(s) 256
StyI CCWWGG 1 cut(s) 227
TaaI ACNGT 2 cut(s) 64, 348
TaqI TCGA 1 cut(s) 87
TasI AATT 3 cut(s) 71, 248, 301
TatI WGTACW 1 cut(s) 90
TauI GCSGC 1 cut(s) 259
Tru1I TTAA 1 cut(s) 66
Tru9I TTAA 1 cut(s) 66
TscAI CASTG 1 cut(s) 242
TspDTI ATGAA 1 cut(s) 51
TspRI CASTG 1 cut(s) 242
XapI RAATTY 2 cut(s) 71, 248
XceI RCATGY 1 cut(s) 60
XcmI CCANNNNNNNNNTGG 1 cut(s) 135
XmnI GAANNNNTTC 1 cut(s) 212
ZrmI AGTACT 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.