Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0001111

Physical Location & Seq

Genomic Coordinates Reverse (-)

49071740 .. 49079365

Gene Structure 7626 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029790

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2739 bp

ATGTGCTTGTATAGGGTGGAAGACAATGGGATGAAATGTATCAACTCTAGAATTGGTTTGTTTGAAATTTTGCTGAAGAACAATGGGGGATATTTTTATGAGGCAAAGAAGGACCGTCTGAAGTTTGGACTGAAGGGTCAGCCTCTTATAATTGATGGGGAGCTATTTCAGTCTATCAAGCCTGATAATTGCTTATGGATCATAGAGTGGAGCACCTCCACCAGCTTCTCAAAGCTTTCAGGAAGAGCCTCACTTCACCGGAGCAATTGGACTTCTTGCATCAACCGAACTTCCTCTTCAGCGTGGTATATACTTCCTCCGATTGTGCAGATGCTAAGTGATTCAAATCCTGGTGTGAGGGACGCAGCTATATTGTGCATTGAGGAGATGTATACACAGGCAGGGACTCAGTTCCGTGATGAACTTCAGTGGCACCATCTTCCCATGTCCATGGTGAAGGATATTAATGCAAGGCTAGAGAGGATTGAATCTAAGAATCGCTCATCAGAGGGACTTACTGCTGTAGAAACAAAGCCCTTAAGCCACAACCCAAAGAGAAATAGTCCAAAGGCTAAGAGTTCCTCTAGGGAGGTATCTCTATTTGGAGCGGAAACTGCTCCAACTGTAAAATCTGTAGACCCTATGAAAGTTTATTATGAAAAGGAACTAATAAGAGAAGTGGAGAAAATAGCTTCTACCTTTGTACCAGAGAAAGACTGGTCAATTCGGATTGCTGCAATGCAGAGAATAGAAGGGCTTGTATATGGAGGTGCTGCTGATTATCAATCATTTCGGGGACTGTTGAAGCTACTTGTGAATCCTCTGAACACACAGCTGTCTGATCGAAGGTCTAGCATGGTGAAGCTGATGTTGCATAACTGTAAAGTTGCTGGGGTGCTCCCTCATATTGCGGATTGTGCAGAAAATGACCGTAATGCAATACTTCGAGCAAGGTGCTGTGACTATGCACCAAACCTGGCCAGAGCGTTAGAGCGTTCCCGACGACTATTTTCACTATTTGATCCCATTATTCAAAGATTAATCAATGAAGAGGATGGGGGTACACACAGGCTACATGCTTCTCCATCTGTTCGTGATAGGAGTACACCAGTCTCATTTACTCCCCAGCCATCTGCTTCTGCTAATCTACATGGATATGGAACTTCGGCTACTGTTGCAATAATGGATAGAAGTTCTAGTTTATCCTCTAGGACTTCTTTCTCTTCAGGACTTCATTTTCTGGAAAGTGTGTTGCATGCAAGCGAAGAGAAGGTCAGTGCAATTGAAAGCATGCTTAGAGGTTTGGAGTTGTTTGACAGACATAATTCTCCAACCCTTAGGTCTTCTAGTCTGGATATAGGAGTTGACCCTCCATTATCTCATGGTCCACCATTCCCTGCTGCTGTCCCAGTTTCTAATCATCTTTCAAACTCTTTAATGACAGATCCAACCAGCTCAAGTAAAAAAGTTTGTAACCGCAATGGTGGCCTGGTTCTGTCTGATATCATTATGAAAATTCATGCTTCCAAAGATCCTGCTAAATCATCATATCGCAGTAATTTATCAGCTGAAGCACTGCCAACTGTTTCATCCTACAACATAAAGAAGGCTTCCGAGAGAATCCACGAAATGCGTTTCATTGAAGAGAATACCGACTGCAGGGGGAGAAGTTTTGATGATAGCCAGCTCTCACAGGAGATGTTAAATTATGTAGAAAGTCCAGCATCGTTGAATGATGCTCTGGGCGAAGTACTGAGTTCTTCTTCAGACTGGTCCGCCAGGGTTGCTGCATTTAATGATCTTCGGTCTTTGTTGCAGCAAGGCCAAAAAGGAATTCATGAAGTGATTCAGAATTTCAAGAAAGTAACGAAGTTGTTTTTCCGACACTTGGATGATCCGCACCACAAACCCTTTGAAAGTTACATGGAGAGGATCCTACCTCATGTTTTCTCACAGTTAATTGACCCAGAGGAGTTAAGTGTAGATTCCCTGTTACCTGCTTTGCTTCGTTCACTAGACGAACAGCGATCACCAAAGGCTAAATTAGCTCAATCAGTGAATACTGAAGGTTCTGGTAATAGTGGCATCCTAAAATTATGGCTTTCGAAGTTGACACCATTGGTCCATGATAAAAACACTGAACTAAACGAGGCAGCTGTTGCATGCATAATCTCTGTATACTCCCACTTTGATCCAAGATTTGTCTTGAATTTTATTCTTAGCTTGTCAGTTGAAGAACAAAATTCTTTGAGAAGAGCCTTGAAACAAAGTACTACTCCTCGCATCAAAGTGGGCCTTATGAACTTTTTGCAAAACAAGAAAGAGCAACAGCGCAACTCTTCCTATTATCCGTCTGATGCAGTCGGAACATCTTCCGAAGAAGGATACATTATTGCTTCAATGAAGAGTCACTTCTTTTGGAGGTATTCTGCTGGTTCAGTTGATAGTGATGGTGGCAGCAAATGGAGTTTAACCCATGAAACAGCCTTGGTCACTGGCTCGGTTGGCCAAGCAGCTTCTGATCAGACTAGGGAAAACTTGTATCAGAATTTTGAGACTGGTTCTAACATTGATGTTCTCAGTGCAAAATCCAAGGATCCAACTTACACGATCAGTGCCATGAATCAGAGCTCTGACCAGAATCACCACCTTCTTAAAGCTTTAAAGATTAATTCCATTCCAGACTCGGGTCCCAGCATTCCTCAGATACTCCATCTGGTGACTTCTTTGACATTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000902 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0005886 GO:0005911 GO:0005938 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007026 GO:0007049 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009653 GO:0009826 GO:0009987 GO:0010639 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0022607 GO:0030054 GO:0030865 GO:0031023 GO:0031109 GO:0031110 GO:0031111 GO:0031114 GO:0031122 GO:0031647 GO:0032502 GO:0032886 GO:0032989 GO:0033043 GO:0034453 GO:0034622 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046785 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050821 GO:0051010 GO:0051128 GO:0051129 GO:0051258 GO:0051302 GO:0051493 GO:0051494 GO:0051781 GO:0055044 GO:0060560 GO:0065003 GO:0065007 GO:0065008 GO:0070507 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CLASP_N HEAT Vac14_Fab1_bd

Protein Analysis

913

Amino Acids

101.51

Weight (kDa)

8.27

Isoelectric Point (pI)

48.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20190
fragaria_vesca	FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_4g18130
malus_domestica	MD05G1182800.v1.1 MD10G1170900.v1.1
prunus_persica	Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1
pyrus_communis	pycom05g16790 pycom10g14730
rosa_chinensis	RchiOBHm_Chr1g0330771 RchiOBHm_Chr1g0330781 RchiOBHm_Chr1g0330801 RchiOBHm_Chr6g0285551
rosa_laevigata	RLG00000012628 RLG00000029789 RLG00000029790 RLG00000029796
rosa_multiflora	Rmu_co8432325.1_g000001 Rmu_sc0000723.1_g000001 Rmu_sc0000723.1_g000002 Rmu_sc0001491.1_g000006 Rmu_sc0002725.1_g000020 Rmu_sc0012495.1_g000004 Rmu_sc0017770.1_g000001 Rmu_sc0031058.1_g000001
rosa_roxburghii	Rroxscaffold_4G00319710 Rroxscaffold_4G00319750 Rroxscaffold_4G00319790 Rroxscaffold_4G00319800 Rroxscaffold_4G00319810 Rroxscaffold_7G00183030
rosa_rugosa	Rorug06G0175400
rosa_samantha	Rh1AG108200 Rh1AG109200 Rh1AG110500 Rh1AG111400 Rh1CG105100 Rh1CG105400 Rh1CG105500 Rh1CG106800 Rh2BG359900 Rh2DG376700 Rh4CG127100 Rh6AG287000 Rh6BG288200 Rh6CG289400 Rh6DG282200
rosa_wichuraiana	Rw0G004360 Rw1G008500 Rw1G008580 Rw1G008750 Rw1G008840 Rw6G024670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	149, 2737
AasI	GACNNNNNNGTC	1 cut(s)	135
Acc36I	ACCTGC	1 cut(s)	2005
AccB1I	GGYRCC	1 cut(s)	432
AccBSI	CCGCTC	1 cut(s)	608
AccI	GTMKAC	3 cut(s)	392, 636, 2178
AciI	CCGC	5 cut(s)	608, 911, 1477, 1776, 1898
AcoI	YGGCCR	2 cut(s)	978, 2506
AcsI	RAATTY	7 cut(s)	66, 1515, 1833, 1852, 2209, 2242, 2548
AcuI	CTGAAG	9 cut(s)	95, 140, 152, 282, 410, 1209, 1590, 1749, 2085
AfaI	GTAC	5 cut(s)	705, 1063, 1105, 1752, 2272
AfiI	CCNNNNNNNGG	3 cut(s)	1659, 1888, 2687
AflII	CTTAAG	1 cut(s)	538
AjnI	CCWGG	4 cut(s)	349, 975, 1488, 1778
AjuI	GAANNNNNNNTTGG	2 cut(s)	1818, 1850
Alw21I	GWGCWC	3 cut(s)	215, 900, 2633
Alw26I	GTCTC	2 cut(s)	1117, 2549
AlwNI	CAGNNNCTG	1 cut(s)	2519
Ama87I	CYCGRG	1 cut(s)	2686
AoxI	GGCC	5 cut(s)	978, 1486, 1822, 2293, 2506
ApeKI	GCWGC	9 cut(s)	365, 734, 773, 1400, 1787, 1816, 2153, 2457, 2513
ApoI	RAATTY	7 cut(s)	66, 1515, 1833, 1852, 2209, 2242, 2548
ArsI	GACNNNNNNTTYG	2 cut(s)	1257, 1289
AseI	ATTAAT	3 cut(s)	465, 1040, 2670
Asp700I	GAANNNNTTC	2 cut(s)	1845, 2371
AspLEI	GCGC	1 cut(s)	2334
AspS9I	GGNCC	6 cut(s)	112, 1385, 1773, 2122, 2293, 2690
AsuHPI	GGTGA	6 cut(s)	248, 466, 871, 2022, 2636, 2731
AsuII	TTCGAA	1 cut(s)	2105
AvaI	CYCGRG	1 cut(s)	2686
AvaII	GGWCC	5 cut(s)	112, 1385, 1773, 2122, 2690
AxyI	CCTNAGG	1 cut(s)	1337
BaeI	ACNNNNGTAYC	2 cut(s)	687, 720
BalI	TGGCCA	2 cut(s)	980, 2508
BamHI	GGATCC	2 cut(s)	1932, 2596
BanI	GGYRCC	1 cut(s)	432
BanII	GRGCYC	1 cut(s)	2633
BbsI	GAAGAC	2 cut(s)	27, 1335
Bbv12I	GWGCWC	3 cut(s)	215, 900, 2633
BbvI	GCAGC	9 cut(s)	377, 721, 760, 1387, 1774, 1828, 2165, 2469, 2525
BccI	CCATC	7 cut(s)	149, 444, 1049, 1093, 1138, 2444, 2721
BcgI	CGANNNNNNTGC	2 cut(s)	936, 970
BciT130I	CCWGG	4 cut(s)	351, 977, 1490, 1780
BciVI	GTATCC	1 cut(s)	2378
BclI	TGATCA	1 cut(s)	2521
BcoDI	GTCTC	2 cut(s)	1117, 2549
BfaI	CTAG	9 cut(s)	48, 476, 585, 852, 1197, 1209, 1347, 2015, 2529
BfmI	CTRYAG	3 cut(s)	522, 633, 1657
BfrI	CTTAAG	1 cut(s)	538
BfuAI	ACCTGC	1 cut(s)	2005
BfuI	GTATCC	1 cut(s)	2378
BisI	GCNGC	9 cut(s)	366, 735, 774, 1401, 1788, 1817, 2154, 2458, 2514
BlsI	GCNGC	9 cut(s)	367, 736, 775, 1402, 1789, 1818, 2155, 2459, 2515
BmcAI	AGTACT	2 cut(s)	1752, 2272
Bme1390I	CCNGG	4 cut(s)	351, 977, 1490, 1780
Bme18I	GGWCC	5 cut(s)	112, 1385, 1773, 2122, 2690
BmeT110I	CYCGRG	1 cut(s)	2686
BmgT120I	GGNCC	6 cut(s)	112, 1385, 1773, 2122, 2293, 2690
BmiI	GGNNCC	5 cut(s)	434, 1934, 2598, 2691, 2692
BmrFI	CCNGG	4 cut(s)	351, 977, 1490, 1780
BmrI	ACTGGG	1 cut(s)	1403
BmsI	GCATC	7 cut(s)	288, 321, 1726, 1733, 2094, 2292, 2347
BmuI	ACTGGG	1 cut(s)	1403
BoxI	GACNNNNGTC	1 cut(s)	2688
BpiI	GAAGAC	2 cut(s)	27, 1335
Bpu14I	TTCGAA	1 cut(s)	2105
BpuEI	CTTGAG	1 cut(s)	1441
BsaBI	GATNNNNATC	1 cut(s)	345
BsaJI	CCNNGG	4 cut(s)	450, 1779, 2487, 2592
BsaWI	WCCGGW	1 cut(s)	258
Bsc4I	CCNNNNNNNGG	3 cut(s)	1659, 1888, 2687
Bse1I	ACTGG	6 cut(s)	722, 1109, 1409, 1775, 2500, 2563
Bse21I	CCTNAGG	1 cut(s)	1337
Bse3DI	GCAATG	2 cut(s)	744, 1486
Bse8I	GATNNNNATC	1 cut(s)	345
BseBI	CCWGG	4 cut(s)	351, 977, 1490, 1780
BseDI	CCNNGG	4 cut(s)	450, 1779, 2487, 2592
BseGI	GGATG	5 cut(s)	36, 1060, 1589, 1897, 2085
BseJI	GATNNNNATC	1 cut(s)	345
BseLI	CCNNNNNNNGG	3 cut(s)	1659, 1888, 2687
BseMI	GCAATG	2 cut(s)	744, 1486
BseMII	CTCAG	4 cut(s)	422, 1745, 2593, 2717
BseNI	ACTGG	6 cut(s)	722, 1109, 1409, 1775, 2500, 2563
BseRI	GAGGAG	3 cut(s)	398, 1985, 2268
BseXI	GCAGC	9 cut(s)	377, 721, 760, 1387, 1774, 1828, 2165, 2469, 2525
BseYI	CCCAGC	3 cut(s)	890, 1125, 2693
BsgI	GTGCAG	2 cut(s)	347, 939
BshFI	GGCC	5 cut(s)	980, 1488, 1824, 2295, 2508
BshNI	GGYRCC	1 cut(s)	432
BsiHKAI	GWGCWC	3 cut(s)	215, 900, 2633
BsiHKCI	CYCGRG	1 cut(s)	2686
BsiSI	CCGG	1 cut(s)	259
BslFI	GGGAC	6 cut(s)	374, 418, 525, 810, 1391, 2676
BslI	CCNNNNNNNGG	3 cut(s)	1659, 1888, 2687
BsmAI	GTCTC	2 cut(s)	1117, 2549
BsmFI	GGGAC	6 cut(s)	374, 418, 525, 810, 1391, 2676
BsmI	GAATGC	1 cut(s)	2697
BsnI	GGCC	5 cut(s)	980, 1488, 1824, 2295, 2508
BsoBI	CYCGRG	1 cut(s)	2686
Bsp119I	TTCGAA	1 cut(s)	2105
Bsp1286I	GDGCHC	3 cut(s)	215, 900, 2633
Bsp19I	CCATGG	1 cut(s)	450
BspACI	CCGC	5 cut(s)	608, 911, 1477, 1776, 1898
BspANI	GGCC	5 cut(s)	980, 1488, 1824, 2295, 2508
BspCNI	CTCAG	4 cut(s)	421, 1746, 2592, 2716
BspHI	TCATGA	1 cut(s)	1837
BspLI	GGNNCC	5 cut(s)	434, 1934, 2598, 2691, 2692
BspMAI	CTGCAG	1 cut(s)	1661
BspMI	ACCTGC	1 cut(s)	2005
BspQI	GCTCTTC	2 cut(s)	238, 2248
BspT104I	TTCGAA	1 cut(s)	2105
BspT107I	GGYRCC	1 cut(s)	432
BspTI	CTTAAG	1 cut(s)	538
BsrBI	CCGCTC	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	744, 1486
BsrI	ACTGG	6 cut(s)	722, 1109, 1409, 1775, 2500, 2563
BssECI	CCNNGG	4 cut(s)	450, 1779, 2487, 2592
BssNAI	GTATAC	2 cut(s)	393, 2179
BssT1I	CCWWGG	3 cut(s)	450, 2487, 2592
Bst1107I	GTATAC	2 cut(s)	393, 2179
Bst2UI	CCWGG	4 cut(s)	351, 977, 1490, 1780
Bst4CI	ACNGT	8 cut(s)	116, 625, 801, 881, 932, 1174, 1585, 1956
Bst6I	CTCTTC	9 cut(s)	238, 301, 1044, 1228, 1260, 1638, 2248, 2344, 2399
BstAFI	CTTAAG	1 cut(s)	538
BstAPI	GCANNNNNTGC	1 cut(s)	2159
BstBI	TTCGAA	1 cut(s)	2105
BstC8I	GCNNGC	5 cut(s)	1257, 1261, 1292, 1685, 2164
BstDSI	CCRYGG	1 cut(s)	450
BstF5I	GGATG	5 cut(s)	36, 1060, 1589, 1897, 2085
BstHHI	GCGC	1 cut(s)	2334
BstMAI	GTCTC	2 cut(s)	1117, 2549
BstMWI	GCNNNNNNNGC	9 cut(s)	614, 871, 917, 1175, 1485, 1784, 2045, 2159, 2505
BstNI	CCWGG	4 cut(s)	351, 977, 1490, 1780
BstNSI	RCATGY	4 cut(s)	1079, 1259, 1294, 2166
BstPAI	GACNNNNGTC	1 cut(s)	2688
BstSCI	CCNGG	4 cut(s)	349, 975, 1488, 1778
BstSFI	CTRYAG	3 cut(s)	522, 633, 1657
BstV1I	GCAGC	9 cut(s)	377, 721, 760, 1387, 1774, 1828, 2165, 2469, 2525
BstV2I	GAAGAC	2 cut(s)	27, 1335
BstX2I	RGATCY	4 cut(s)	1444, 1531, 1932, 2596
BstXI	CCANNNNNNTGG	1 cut(s)	451
BstYI	RGATCY	4 cut(s)	1444, 1531, 1932, 2596
BstZ17I	GTATAC	2 cut(s)	393, 2179
Bsu36I	CCTNAGG	1 cut(s)	1337
BsuI	GTATCC	1 cut(s)	2378
BsuRI	GGCC	5 cut(s)	980, 1488, 1824, 2295, 2508
BtgI	CCRYGG	1 cut(s)	450
BtsCI	GGATG	5 cut(s)	36, 1060, 1589, 1897, 2085
BtsI	GCAGTG	1 cut(s)	1574
BtsIMutI	CAGTG	8 cut(s)	434, 1282, 1574, 2061, 2136, 2493, 2587, 2620
BveI	ACCTGC	1 cut(s)	2005
Cac8I	GCNNGC	5 cut(s)	1257, 1261, 1292, 1685, 2164
CaiI	CAGNNNCTG	1 cut(s)	2519
CciI	TCATGA	1 cut(s)	1837
CfoI	GCGC	1 cut(s)	2334
Cfr13I	GGNCC	6 cut(s)	112, 1385, 1773, 2122, 2293, 2690
CseI	GACGC	1 cut(s)	371
Csp6I	GTAC	5 cut(s)	704, 1062, 1104, 1751, 2271
CviQI	GTAC	5 cut(s)	704, 1062, 1104, 1751, 2271
DraI	TTTAAA	1 cut(s)	2664
DrdI	GACNNNNNNGTC	1 cut(s)	135
DseDI	GACNNNNNNGTC	1 cut(s)	135
EaeI	YGGCCR	2 cut(s)	978, 2506
Eam1104I	CTCTTC	9 cut(s)	238, 301, 1044, 1228, 1260, 1638, 2248, 2344, 2399
EarI	CTCTTC	9 cut(s)	238, 301, 1044, 1228, 1260, 1638, 2248, 2344, 2399
EciI	GGCGGA	1 cut(s)	1765
Ecl136II	GAGCTC	1 cut(s)	2631
Eco130I	CCWWGG	3 cut(s)	450, 2487, 2592
Eco24I	GRGCYC	1 cut(s)	2633
Eco32I	GATATC	1 cut(s)	1504
Eco47I	GGWCC	5 cut(s)	112, 1385, 1773, 2122, 2690
Eco53kI	GAGCTC	1 cut(s)	2631
Eco57I	CTGAAG	9 cut(s)	95, 140, 152, 282, 410, 1209, 1590, 1749, 2085
Eco81I	CCTNAGG	1 cut(s)	1337
Eco88I	CYCGRG	1 cut(s)	2686
EcoICRI	GAGCTC	1 cut(s)	2631
EcoO109I	RGGNCCY	1 cut(s)	2690
EcoRI	GAATTC	1 cut(s)	1833
EcoRII	CCWGG	4 cut(s)	349, 975, 1488, 1778
EcoRV	GATATC	1 cut(s)	1504
EcoT14I	CCWWGG	3 cut(s)	450, 2487, 2592
EcoT22I	ATGCAT	1 cut(s)	2168
EcoT38I	GRGCYC	1 cut(s)	2633
ErhI	CCWWGG	3 cut(s)	450, 2487, 2592
FalI	AAGNNNNNCTT	4 cut(s)	2280, 2312, 2396, 2428
FaqI	GGGAC	6 cut(s)	374, 418, 525, 810, 1391, 2676
FbaI	TGATCA	1 cut(s)	2521
FblI	GTMKAC	3 cut(s)	392, 636, 2178
Fnu4HI	GCNGC	9 cut(s)	366, 735, 774, 1401, 1788, 1817, 2154, 2458, 2514
FokI	GGATG	5 cut(s)	43, 1067, 1576, 1904, 2072
FriOI	GRGCYC	1 cut(s)	2633
Fsp4HI	GCNGC	9 cut(s)	366, 735, 774, 1401, 1788, 1817, 2154, 2458, 2514
FspBI	CTAG	9 cut(s)	48, 476, 585, 852, 1197, 1209, 1347, 2015, 2529
GlaI	GCGC	1 cut(s)	2333
GluI	GCNGC	9 cut(s)	366, 735, 774, 1401, 1788, 1817, 2154, 2458, 2514
GsaI	CCCAGC	3 cut(s)	894, 1129, 2697
HaeIII	GGCC	5 cut(s)	980, 1488, 1824, 2295, 2508
HapII	CCGG	1 cut(s)	259
HgaI	GACGC	1 cut(s)	371
HhaI	GCGC	1 cut(s)	2334
Hin6I	GCGC	1 cut(s)	2332
HinP1I	GCGC	1 cut(s)	2332
HincII	GTYRAC	2 cut(s)	1366, 2112
HindII	GTYRAC	2 cut(s)	1366, 2112
HindIII	AAGCTT	2 cut(s)	233, 2658
HpaII	CCGG	1 cut(s)	259
HphI	GGTGA	6 cut(s)	248, 466, 871, 2022, 2636, 2731
Hpy166II	GTNNAC	9 cut(s)	393, 637, 1064, 1106, 1366, 1388, 2012, 2112, 2179
Hpy8I	GTNNAC	9 cut(s)	393, 637, 1064, 1106, 1366, 1388, 2012, 2112, 2179
Hpy99I	CGWCG	1 cut(s)	1005
HpyCH4III	ACNGT	8 cut(s)	116, 625, 801, 881, 932, 1174, 1585, 1956
HpyF10VI	GCNNNNNNNGC	9 cut(s)	614, 871, 917, 1175, 1485, 1784, 2045, 2159, 2505
HspAI	GCGC	1 cut(s)	2332
KflI	GGGWCCC	1 cut(s)	2690
Ksp22I	TGATCA	1 cut(s)	2521
LguI	GCTCTTC	2 cut(s)	238, 2248
LmnI	GCTCC	6 cut(s)	160, 210, 261, 605, 622, 903
Lsp1109I	GCAGC	9 cut(s)	377, 721, 760, 1387, 1774, 1828, 2165, 2469, 2525
LweI	GCATC	7 cut(s)	288, 321, 1726, 1733, 2094, 2292, 2347
MaeI	CTAG	9 cut(s)	48, 476, 585, 852, 1197, 1209, 1347, 2015, 2529
MaeIII	GTNAC	8 cut(s)	959, 1472, 1864, 1919, 1992, 2408, 2491, 2719
MbiI	CCGCTC	1 cut(s)	608
MfeI	CAATTG	2 cut(s)	265, 1281
MflI	RGATCY	4 cut(s)	1444, 1531, 1932, 2596
MhlI	GDGCHC	3 cut(s)	215, 900, 2633
MlsI	TGGCCA	2 cut(s)	980, 2508
MluNI	TGGCCA	2 cut(s)	980, 2508
MlyI	GAGTC	3 cut(s)	400, 2416, 2678
MmeI	TCCRAC	6 cut(s)	644, 1355, 1472, 1906, 2344, 2624
Mox20I	TGGCCA	2 cut(s)	980, 2508
Mph1103I	ATGCAT	1 cut(s)	2168
MroXI	GAANNNNTTC	2 cut(s)	1845, 2371
MscI	TGGCCA	2 cut(s)	980, 2508
MslI	CAYNNNNRTG	4 cut(s)	449, 1155, 1890, 2288
Msp20I	TGGCCA	2 cut(s)	980, 2508
MspA1I	CMGCKG	3 cut(s)	835, 1568, 2156
MspCI	CTTAAG	1 cut(s)	538
MspI	CCGG	1 cut(s)	259
MspR9I	CCNGG	4 cut(s)	351, 977, 1490, 1780
MunI	CAATTG	2 cut(s)	265, 1281
Mva1269I	GAATGC	1 cut(s)	2697
MvaI	CCWGG	4 cut(s)	351, 977, 1490, 1780
MwoI	GCNNNNNNNGC	9 cut(s)	614, 871, 917, 1175, 1485, 1784, 2045, 2159, 2505
NcoI	CCATGG	1 cut(s)	450
NlaIV	GGNNCC	5 cut(s)	434, 1934, 2598, 2691, 2692
NmuCI	GTSAC	4 cut(s)	959, 2408, 2491, 2719
NsiI	ATGCAT	1 cut(s)	2168
NspI	RCATGY	4 cut(s)	1079, 1259, 1294, 2166
NspV	TTCGAA	1 cut(s)	2105
PaeI	GCATGC	3 cut(s)	1259, 1294, 2166
PagI	TCATGA	1 cut(s)	1837
PciSI	GCTCTTC	2 cut(s)	238, 2248
PctI	GAATGC	1 cut(s)	2697
PdmI	GAANNNNTTC	2 cut(s)	1845, 2371
PfeI	GAWTC	9 cut(s)	341, 488, 496, 817, 1620, 1846, 1985, 2623, 2641
PkrI	GCNGC	9 cut(s)	367, 736, 775, 1402, 1789, 1818, 2155, 2459, 2515
PleI	GAGTC	3 cut(s)	400, 2415, 2678
PpsI	GAGTC	3 cut(s)	400, 2415, 2678
PpuMI	RGGWCCY	1 cut(s)	2690
PshAI	GACNNNNGTC	1 cut(s)	2688
PshBI	ATTAAT	3 cut(s)	465, 1040, 2670
PsiI	TTATAA	2 cut(s)	149, 2737
Psp124BI	GAGCTC	1 cut(s)	2633
Psp5II	RGGWCCY	1 cut(s)	2690
Psp6I	CCWGG	4 cut(s)	349, 975, 1488, 1778
PspFI	CCCAGC	3 cut(s)	890, 1125, 2693
PspGI	CCWGG	4 cut(s)	349, 975, 1488, 1778
PspN4I	GGNNCC	5 cut(s)	434, 1934, 2598, 2691, 2692
PspPI	GGNCC	6 cut(s)	112, 1385, 1773, 2122, 2293, 2690
PspPPI	RGGWCCY	1 cut(s)	2690
PsrI	GAACNNNNNNTAC	2 cut(s)	1153, 1185
PstI	CTGCAG	1 cut(s)	1661
PstNI	CAGNNNCTG	1 cut(s)	2519
PsuI	RGATCY	4 cut(s)	1444, 1531, 1932, 2596
PvuII	CAGCTG	3 cut(s)	835, 1568, 2156
RsaI	GTAC	5 cut(s)	705, 1063, 1105, 1752, 2272
RsaNI	GTAC	5 cut(s)	704, 1062, 1104, 1751, 2271
RseI	CAYNNNNRTG	4 cut(s)	449, 1155, 1890, 2288
SacI	GAGCTC	1 cut(s)	2633
SapI	GCTCTTC	2 cut(s)	238, 2248
SatI	GCNGC	9 cut(s)	366, 735, 774, 1401, 1788, 1817, 2154, 2458, 2514
Sau96I	GGNCC	6 cut(s)	112, 1385, 1773, 2122, 2293, 2690
ScaI	AGTACT	2 cut(s)	1752, 2272
SchI	GAGTC	3 cut(s)	400, 2416, 2678
ScrFI	CCNGG	4 cut(s)	351, 977, 1490, 1780
SduI	GDGCHC	3 cut(s)	215, 900, 2633
SfaNI	GCATC	7 cut(s)	288, 321, 1726, 1733, 2094, 2292, 2347
SfcI	CTRYAG	3 cut(s)	522, 633, 1657
SfuI	TTCGAA	1 cut(s)	2105
SinI	GGWCC	5 cut(s)	112, 1385, 1773, 2122, 2690
SmiMI	CAYNNNNRTG	4 cut(s)	449, 1155, 1890, 2288
SmlI	CTYRAG	2 cut(s)	538, 1456
SmoI	CTYRAG	2 cut(s)	538, 1456
SphI	GCATGC	3 cut(s)	1259, 1294, 2166
SsiI	CCGC	5 cut(s)	608, 911, 1477, 1776, 1898
SspMI	CTAG	9 cut(s)	48, 476, 585, 852, 1197, 1209, 1347, 2015, 2529
SstI	GAGCTC	1 cut(s)	2633
StyD4I	CCNGG	4 cut(s)	349, 975, 1488, 1778
StyI	CCWWGG	3 cut(s)	450, 2487, 2592
TaaI	ACNGT	8 cut(s)	116, 625, 801, 881, 932, 1174, 1585, 1956
TaqI	TCGA	3 cut(s)	844, 946, 2105
TaqII	GACCGA	1 cut(s)	1794
TatI	WGTACW	3 cut(s)	1103, 1750, 2270
TfiI	GAWTC	9 cut(s)	341, 488, 496, 817, 1620, 1846, 1985, 2623, 2641
TscAI	CASTG	8 cut(s)	434, 1282, 1581, 2061, 2143, 2500, 2587, 2620
TseFI	GTSAC	4 cut(s)	959, 2408, 2491, 2719
TseI	GCWGC	9 cut(s)	365, 734, 773, 1400, 1787, 1816, 2153, 2457, 2513
Tsp45I	GTSAC	4 cut(s)	959, 2408, 2491, 2719
TspGWI	ACGGA	2 cut(s)	404, 2340
TspRI	CASTG	8 cut(s)	434, 1282, 1581, 2061, 2143, 2500, 2587, 2620
Vha464I	CTTAAG	1 cut(s)	538
VpaK11BI	GGWCC	5 cut(s)	112, 1385, 1773, 2122, 2690
VspI	ATTAAT	3 cut(s)	465, 1040, 2670
XapI	RAATTY	7 cut(s)	66, 1515, 1833, 1852, 2209, 2242, 2548
XbaI	TCTAGA	1 cut(s)	47
XceI	RCATGY	4 cut(s)	1079, 1259, 1294, 2166
XcmI	CCANNNNNNNNNTGG	1 cut(s)	714
XmiI	GTMKAC	3 cut(s)	392, 636, 2178
XmnI	GAANNNNTTC	2 cut(s)	1845, 2371
XspI	CTAG	9 cut(s)	48, 476, 585, 852, 1197, 1209, 1347, 2015, 2529
ZrmI	AGTACT	2 cut(s)	1752, 2272
Zsp2I	ATGCAT	1 cut(s)	2168

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.