Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0001111

Physical Location & Seq

Genomic Coordinates Reverse (-)

47977188 .. 47983867

Gene Structure 6680 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00319810.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGGAAGTTACGGCCGGGTCGGATCGGCCGGGTCCGGGACTTCATCCGTCACAAGCGAAGTTACTTGGTAAAGGTACTGAGCGTAGTCCGGGAAGTGTGTTGCATGCAAGCAAACAAAAGGTCGGTGCAATTGAAAGCATGCTTAGAGGTTTGGAGTCGTTTGACTGCAGAGTCGACCCTCCATCATCTCGTGATCCACCATTCCCCGTCGCTGTCCCGCCTTCTAATCATCTTTCAAACTCTCTAATGACAGATTCAACCACCTCAAGTAACAAAGATGCCCCGCCTAAGAAGAATGTGACAGAAGGATATCTCACAGCAGGAGGAGAGGTTTTGATGATAGCCGCTCTCACAGGAGATGGCAAATCATGTAGAAGGTCCAAGCATTGTTCTATGATGCTCGAGCGAAGGACCGAGTTCATCTTCGACCGGTCAGCTAGGGCCTCGATTTCTTCTGGAAAGTTGTTAAGAACATCAAGACGAACTCACTGGTTCAAGAATCACTCAAAACGAAGCTCTATAGCTCGAGATATCGAGATCGAACCAAAACGAGCTCAAAACGGAATCGTGTCCTCCACCGCCGCCGCCGCCGTGTTGCGGTGCAAGGTAGCCACCGGAAGCTGTGCAAGGACGAGGCGAGAGCGTGGGATGTGGTTTGGTGCCTTGAGGTGGCCTGAGAAAGAGCGACAGCGCAAGTCTTCTTATGATCCGATGCAGTTGGAACATCTTCCGAAGAAGGATACGTTAGTGCCTCAAAGAAGTCATTTCTTTGGGAGGTATCCTGCTGGTTCAGTTGATAGTGATGGTGGCAGGAAGTGGAGTTTAACCCAAGAAACAGCCTTGGTCACTGGCTTGGTTGGCCAAGCAGCTTCTGATCAGACTGGGGAAAACTATTCGCGTACTCATTCCCTGGATATTAATGGGGTTTTGAACTTGGACCATATTGGACCTGCTGAGAGCATTGTGCATAGTGGAACTGCCACTGACTTGGACCAGAATCACCACCTACTTAAAGCTTTAAAGATTAATTCCATTCCAGACTCTGGTCCCAGCATTCCTCAGATACTCCATCTGATTAGCACTGGAACTGAGGGAAGTCCTGCAGAAAGTAAGCATGGTGCACTTCAACAGCTAATCGGTGCTGCTATAACTAATGACCAATCTATTTGGACCAAGTTCTGCAATCAAATCTTGACAGTTGTACTTGAGATGTTGGATGATTTTGACTCCTCCATCCGGGAGCTCTCTCTTTCATTGATTATTGAAAAGCTTAAGAACCAGAAAGCTGCAATGGATTCTATTGAGATCATAATTGAGAAGCTGCTGCATGTTACAAAGGACTTAATTCCCCAGGTTGCAAATGAATCAGAGCACTGTTCGAGTATTGTTCTGTCGCTGTATGATCCATTCAGATGTTCGAGTGTATGTATTTTTATCAGCACTGAGAAAATATGTGCGCGGGTTGGTGGTGGTGGTGAAGAAAATATGTGCGCTCCACAGTCAAAGAAGTCATTTGCTGAACACTACTATGAAAACAGGTTGTTGGATATGTGCTTCTCTCTAAATGTCACCATAGATAAAAGTCTTTTTGATTTTCCTACCCCGTGTAAACTAGTTCTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000902 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005874 GO:0005876 GO:0005886 GO:0005911 GO:0005938 GO:0006996 GO:0007010 GO:0007017 GO:0007020 GO:0007026 GO:0007049 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009653 GO:0009826 GO:0009987 GO:0010639 GO:0015630 GO:0015631 GO:0016020 GO:0016043 GO:0016049 GO:0022607 GO:0030054 GO:0030865 GO:0031023 GO:0031109 GO:0031110 GO:0031111 GO:0031114 GO:0031122 GO:0031647 GO:0032502 GO:0032886 GO:0032989 GO:0033043 GO:0034453 GO:0034622 GO:0040007 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043242 GO:0043244 GO:0043622 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0046785 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048589 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050821 GO:0051010 GO:0051128 GO:0051129 GO:0051258 GO:0051302 GO:0051493 GO:0051494 GO:0051781 GO:0055044 GO:0060560 GO:0065003 GO:0065007 GO:0065008 GO:0070507 GO:0071840 GO:0071944 GO:0097435 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0099568 GO:1901879 GO:1901880 GO:1902903 GO:1902904

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CLASP_N HEAT Vac14_Fab1_bd

Protein Analysis

540

Amino Acids

59.17

Weight (kDa)

8.58

Isoelectric Point (pI)

48.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001111)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20190
fragaria_vesca	FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_2g19850 FvH4_4g18130
malus_domestica	MD05G1182800.v1.1 MD10G1170900.v1.1
prunus_persica	Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1 Prupe.8G209400_v2.0.a1
pyrus_communis	pycom05g16790 pycom10g14730
rosa_chinensis	RchiOBHm_Chr1g0330771 RchiOBHm_Chr1g0330781 RchiOBHm_Chr1g0330801 RchiOBHm_Chr6g0285551
rosa_laevigata	RLG00000012628 RLG00000029789 RLG00000029790 RLG00000029796
rosa_multiflora	Rmu_co8432325.1_g000001 Rmu_sc0000723.1_g000001 Rmu_sc0000723.1_g000002 Rmu_sc0001491.1_g000006 Rmu_sc0002725.1_g000020 Rmu_sc0012495.1_g000004 Rmu_sc0017770.1_g000001 Rmu_sc0031058.1_g000001
rosa_roxburghii	Rroxscaffold_4G00319710 Rroxscaffold_4G00319750 Rroxscaffold_4G00319790 Rroxscaffold_4G00319800 Rroxscaffold_4G00319810 Rroxscaffold_7G00183030
rosa_rugosa	Rorug06G0175400
rosa_samantha	Rh1AG108200 Rh1AG109200 Rh1AG110500 Rh1AG111400 Rh1CG105100 Rh1CG105400 Rh1CG105500 Rh1CG106800 Rh2BG359900 Rh2DG376700 Rh4CG127100 Rh6AG287000 Rh6BG288200 Rh6CG289400 Rh6DG282200
rosa_wichuraiana	Rw0G004360 Rw1G008500 Rw1G008580 Rw1G008750 Rw1G008840 Rw6G024670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	170
Acc36I	ACCTGC	1 cut(s)	958
AccB1I	GGYRCC	1 cut(s)	659
AccB7I	CCANNNNNTGG	1 cut(s)	1043
AccBSI	CCGCTC	1 cut(s)	347
AccI	GTMKAC	1 cut(s)	174
AccII	CGCG	2 cut(s)	898, 1459
AciI	CCGC	9 cut(s)	218, 284, 345, 579, 582, 585, 588, 598, 1459
AclWI	GGATC	4 cut(s)	30, 188, 701, 1397
AcoI	YGGCCR	3 cut(s)	12, 26, 859
AfaI	GTAC	3 cut(s)	76, 901, 1203
AfiI	CCNNNNNNNGG	5 cut(s)	35, 597, 669, 1043, 1236
AflII	CTTAAG	1 cut(s)	1271
AgeI	ACCGGT	1 cut(s)	429
AgsI	TTSAA	7 cut(s)	134, 237, 258, 496, 931, 1127, 1265
AhlI	ACTAGT	1 cut(s)	1612
AjnI	CCWGG	2 cut(s)	909, 1350
Alw21I	GWGCWC	4 cut(s)	556, 1123, 1245, 1374
Alw44I	GTGCAC	1 cut(s)	1119
AlwI	GGATC	4 cut(s)	30, 188, 701, 1397
AlwNI	CAGNNNCTG	2 cut(s)	872, 1043
Ama87I	CYCGRG	2 cut(s)	401, 525
AoxI	GGCC	5 cut(s)	12, 26, 441, 671, 859
ApaLI	GTGCAC	1 cut(s)	1119
ApeKI	GCWGC	5 cut(s)	866, 1142, 1286, 1321, 1324
ArsI	GACNNNNNNTTYG	2 cut(s)	105, 137
AseI	ATTAAT	2 cut(s)	918, 1026
AsiGI	ACCGGT	1 cut(s)	429
Asp700I	GAANNNNTTC	1 cut(s)	726
AspLEI	GCGC	3 cut(s)	693, 1459, 1493
AspS9I	GGNCC	9 cut(s)	32, 378, 411, 441, 937, 947, 991, 1046, 1170
AsuC2I	CCSGG	5 cut(s)	16, 30, 36, 90, 1238
AsuHPI	GGTGA	3 cut(s)	992, 1487, 1561
AvaI	CYCGRG	2 cut(s)	401, 525
AvaII	GGWCC	8 cut(s)	32, 378, 411, 937, 947, 991, 1046, 1170
BaeGI	GKGCMC	1 cut(s)	1123
BaeI	ACNNNNGTAYC	2 cut(s)	732, 765
BalI	TGGCCA	1 cut(s)	861
BanI	GGYRCC	1 cut(s)	659
BanII	GRGCYC	2 cut(s)	556, 1245
BauI	CACGAG	1 cut(s)	189
BbsI	GAAGAC	1 cut(s)	690
Bbv12I	GWGCWC	4 cut(s)	556, 1123, 1245, 1374
BbvI	GCAGC	5 cut(s)	878, 1129, 1273, 1308, 1311
BccI	CCATC	5 cut(s)	190, 353, 797, 1077, 1241
BceAI	ACGGC	2 cut(s)	27, 575
BciT130I	CCWGG	2 cut(s)	911, 1352
BciVI	GTATCC	2 cut(s)	733, 789
BclI	TGATCA	1 cut(s)	874
BcnI	CCSGG	5 cut(s)	16, 30, 36, 90, 1238
BcuI	ACTAGT	1 cut(s)	1612
BfaI	CTAG	2 cut(s)	438, 1613
BfmI	CTRYAG	3 cut(s)	166, 519, 1101
BfrI	CTTAAG	1 cut(s)	1271
BfuAI	ACCTGC	1 cut(s)	958
BfuI	GTATCC	2 cut(s)	733, 789
BisI	GCNGC	9 cut(s)	345, 582, 585, 588, 867, 1143, 1287, 1322, 1325
BlsI	GCNGC	9 cut(s)	346, 583, 586, 589, 868, 1144, 1288, 1323, 1326
Bme1390I	CCNGG	7 cut(s)	16, 30, 36, 90, 911, 1238, 1352
Bme18I	GGWCC	8 cut(s)	32, 378, 411, 937, 947, 991, 1046, 1170
BmeT110I	CYCGRG	2 cut(s)	401, 525
BmgT120I	GGNCC	9 cut(s)	32, 378, 411, 441, 937, 947, 991, 1046, 1170
BmiI	GGNNCC	3 cut(s)	33, 661, 1048
BmrFI	CCNGG	7 cut(s)	16, 30, 36, 90, 911, 1238, 1352
BmrI	ACTGGG	1 cut(s)	891
BmsI	GCATC	3 cut(s)	268, 387, 702
BmuI	ACTGGG	1 cut(s)	891
BoxI	GACNNNNGTC	1 cut(s)	1044
BpiI	GAAGAC	1 cut(s)	690
BpuEI	CTTGAG	3 cut(s)	250, 685, 1226
BpuMI	CCSGG	5 cut(s)	16, 30, 36, 90, 1238
BsaJI	CCNNGG	3 cut(s)	840, 909, 1350
BsaWI	WCCGGW	2 cut(s)	429, 614
BsaXI	ACNNNNNCTCC	2 cut(s)	315, 345
Bsc4I	CCNNNNNNNGG	5 cut(s)	35, 597, 669, 1043, 1236
Bse118I	RCCGGY	1 cut(s)	429
Bse1I	ACTGG	4 cut(s)	494, 853, 886, 1087
Bse3DI	GCAATG	1 cut(s)	1296
BseBI	CCWGG	2 cut(s)	911, 1352
BseDI	CCNNGG	3 cut(s)	840, 909, 1350
BseGI	GGATG	4 cut(s)	43, 654, 1222, 1233
BseLI	CCNNNNNNNGG	5 cut(s)	35, 597, 669, 1043, 1236
BseMI	GCAATG	1 cut(s)	1296
BseMII	CTCAG	6 cut(s)	69, 666, 945, 1073, 1080, 1434
BseNI	ACTGG	4 cut(s)	494, 853, 886, 1087
BseRI	GAGGAG	2 cut(s)	339, 1219
BseSI	GKGCMC	1 cut(s)	1123
BseX3I	CGGCCG	2 cut(s)	12, 26
BseXI	GCAGC	5 cut(s)	878, 1129, 1273, 1308, 1311
BseYI	CCCAGC	1 cut(s)	1049
Bsh1236I	CGCG	2 cut(s)	898, 1459
Bsh1285I	CGRYCG	3 cut(s)	15, 29, 430
BshFI	GGCC	5 cut(s)	14, 28, 443, 673, 861
BshNI	GGYRCC	1 cut(s)	659
BshTI	ACCGGT	1 cut(s)	429
BsiEI	CGRYCG	3 cut(s)	15, 29, 430
BsiHKAI	GWGCWC	4 cut(s)	556, 1123, 1245, 1374
BsiHKCI	CYCGRG	2 cut(s)	401, 525
BsiSI	CCGG	7 cut(s)	15, 29, 35, 89, 430, 615, 1237
BslFI	GGGAC	3 cut(s)	51, 200, 1032
BslI	CCNNNNNNNGG	5 cut(s)	35, 597, 669, 1043, 1236
BsmFI	GGGAC	3 cut(s)	51, 200, 1032
BsmI	GAATGC	1 cut(s)	1053
BsnI	GGCC	5 cut(s)	14, 28, 443, 673, 861
BsoBI	CYCGRG	2 cut(s)	401, 525
Bsp1286I	GDGCHC	4 cut(s)	556, 1123, 1245, 1374
Bsp143I	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
BspACI	CCGC	9 cut(s)	218, 284, 345, 579, 582, 585, 588, 598, 1459
BspANI	GGCC	5 cut(s)	14, 28, 443, 673, 861
BspCNI	CTCAG	6 cut(s)	70, 667, 946, 1072, 1081, 1435
BspFNI	CGCG	2 cut(s)	898, 1459
BspLI	GGNNCC	3 cut(s)	33, 661, 1048
BspMAI	CTGCAG	2 cut(s)	170, 1105
BspMI	ACCTGC	1 cut(s)	958
BspPI	GGATC	4 cut(s)	30, 188, 701, 1397
BspT107I	GGYRCC	1 cut(s)	659
BspTI	CTTAAG	1 cut(s)	1271
BsrBI	CCGCTC	1 cut(s)	347
BsrDI	GCAATG	1 cut(s)	1296
BsrFI	RCCGGY	1 cut(s)	429
BsrI	ACTGG	4 cut(s)	494, 853, 886, 1087
BssAI	RCCGGY	1 cut(s)	429
BssECI	CCNNGG	3 cut(s)	840, 909, 1350
BssMI	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
BssSI	CACGAG	1 cut(s)	189
BssT1I	CCWWGG	1 cut(s)	840
Bst2BI	CACGAG	1 cut(s)	189
Bst2UI	CCWGG	2 cut(s)	911, 1352
Bst4CI	ACNGT	3 cut(s)	1198, 1376, 1500
BstAFI	CTTAAG	1 cut(s)	1271
BstC8I	GCNNGC	3 cut(s)	105, 109, 140
BstDEI	CTNAG	8 cut(s)	78, 143, 288, 675, 954, 1059, 1089, 1443
BstF5I	GGATG	4 cut(s)	43, 654, 1222, 1233
BstFNI	CGCG	2 cut(s)	898, 1459
BstHHI	GCGC	3 cut(s)	693, 1459, 1493
BstKTI	GATC	7 cut(s)	25, 196, 540, 709, 877, 1308, 1405
BstMBI	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
BstMCI	CGRYCG	3 cut(s)	15, 29, 430
BstMWI	GCNNNNNNNGC	2 cut(s)	587, 858
BstNI	CCWGG	2 cut(s)	911, 1352
BstNSI	RCATGY	3 cut(s)	107, 142, 1331
BstPAI	GACNNNNGTC	1 cut(s)	1044
BstSCI	CCNGG	7 cut(s)	14, 28, 34, 88, 909, 1236, 1350
BstSFI	CTRYAG	3 cut(s)	166, 519, 1101
BstSLI	GKGCMC	1 cut(s)	1123
BstUI	CGCG	2 cut(s)	898, 1459
BstV1I	GCAGC	5 cut(s)	878, 1129, 1273, 1308, 1311
BstV2I	GAAGAC	1 cut(s)	690
BstXI	CCANNNNNNTGG	1 cut(s)	988
BstZI	CGGCCG	2 cut(s)	12, 26
BsuI	GTATCC	2 cut(s)	733, 789
BsuRI	GGCC	5 cut(s)	14, 28, 443, 673, 861
BtsCI	GGATG	4 cut(s)	43, 654, 1222, 1233
BtsIMutI	CAGTG	6 cut(s)	487, 846, 981, 1080, 1372, 1440
BveI	ACCTGC	1 cut(s)	958
Cac8I	GCNNGC	3 cut(s)	105, 109, 140
CaiI	CAGNNNCTG	2 cut(s)	872, 1043
CfoI	GCGC	3 cut(s)	693, 1459, 1493
Cfr10I	RCCGGY	1 cut(s)	429
Cfr13I	GGNCC	9 cut(s)	32, 378, 411, 441, 937, 947, 991, 1046, 1170
Csp6I	GTAC	3 cut(s)	75, 900, 1202
CspAI	ACCGGT	1 cut(s)	429
CviAII	CATG	5 cut(s)	104, 139, 369, 1115, 1328
CviQI	GTAC	3 cut(s)	75, 900, 1202
DdeI	CTNAG	8 cut(s)	78, 143, 288, 675, 954, 1059, 1089, 1443
DpnI	GATC	7 cut(s)	24, 195, 539, 708, 876, 1307, 1404
DpnII	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
DraI	TTTAAA	1 cut(s)	1020
DrdI	GACNNNNNNGTC	1 cut(s)	170
DseDI	GACNNNNNNGTC	1 cut(s)	170
EaeI	YGGCCR	3 cut(s)	12, 26, 859
EagI	CGGCCG	2 cut(s)	12, 26
Ecl136II	GAGCTC	2 cut(s)	554, 1243
EclXI	CGGCCG	2 cut(s)	12, 26
Eco130I	CCWWGG	1 cut(s)	840
Eco24I	GRGCYC	2 cut(s)	556, 1245
Eco32I	GATATC	2 cut(s)	311, 532
Eco47I	GGWCC	8 cut(s)	32, 378, 411, 937, 947, 991, 1046, 1170
Eco52I	CGGCCG	2 cut(s)	12, 26
Eco53kI	GAGCTC	2 cut(s)	554, 1243
Eco88I	CYCGRG	2 cut(s)	401, 525
EcoICRI	GAGCTC	2 cut(s)	554, 1243
EcoO109I	RGGNCCY	1 cut(s)	441
EcoRII	CCWGG	2 cut(s)	909, 1350
EcoRV	GATATC	2 cut(s)	311, 532
EcoT14I	CCWWGG	1 cut(s)	840
EcoT38I	GRGCYC	2 cut(s)	556, 1245
ErhI	CCWWGG	1 cut(s)	840
FaeI	CATG	5 cut(s)	107, 142, 372, 1118, 1331
FaqI	GGGAC	3 cut(s)	51, 200, 1032
FatI	CATG	5 cut(s)	103, 138, 368, 1114, 1327
FauI	CCCGC	3 cut(s)	225, 291, 1452
FbaI	TGATCA	1 cut(s)	874
FblI	GTMKAC	1 cut(s)	174
Fnu4HI	GCNGC	9 cut(s)	345, 582, 585, 588, 867, 1143, 1287, 1322, 1325
FokI	GGATG	4 cut(s)	30, 661, 1220, 1229
FriOI	GRGCYC	2 cut(s)	556, 1245
Fsp4HI	GCNGC	9 cut(s)	345, 582, 585, 588, 867, 1143, 1287, 1322, 1325
FspBI	CTAG	2 cut(s)	438, 1613
GlaI	GCGC	3 cut(s)	692, 1458, 1492
GluI	GCNGC	9 cut(s)	345, 582, 585, 588, 867, 1143, 1287, 1322, 1325
GsaI	CCCAGC	1 cut(s)	1053
HaeIII	GGCC	5 cut(s)	14, 28, 443, 673, 861
HapII	CCGG	7 cut(s)	15, 29, 35, 89, 430, 615, 1237
HhaI	GCGC	3 cut(s)	693, 1459, 1493
Hin1II	CATG	5 cut(s)	107, 142, 372, 1118, 1331
Hin6I	GCGC	3 cut(s)	691, 1457, 1491
HinP1I	GCGC	3 cut(s)	691, 1457, 1491
HincII	GTYRAC	1 cut(s)	175
HindII	GTYRAC	1 cut(s)	175
HindIII	AAGCTT	2 cut(s)	1014, 1268
HpaII	CCGG	7 cut(s)	15, 29, 35, 89, 430, 615, 1237
HphI	GGTGA	3 cut(s)	992, 1487, 1561
Hpy166II	GTNNAC	3 cut(s)	175, 1121, 1610
Hpy188I	TCNGA	9 cut(s)	22, 711, 732, 874, 879, 1062, 1074, 1369, 1412
Hpy188III	TCNNGA	8 cut(s)	191, 456, 477, 496, 527, 535, 1037, 1192
Hpy8I	GTNNAC	3 cut(s)	175, 1121, 1610
Hpy99I	CGWCG	1 cut(s)	212
HpyAV	CCTTC	5 cut(s)	231, 299, 369, 402, 730
HpyCH4III	ACNGT	3 cut(s)	1198, 1376, 1500
HpyCH4IV	ACGT	1 cut(s)	743
HpyF10VI	GCNNNNNNNGC	2 cut(s)	587, 858
HpyF3I	CTNAG	8 cut(s)	78, 143, 288, 675, 954, 1059, 1089, 1443
HpySE526I	ACGT	1 cut(s)	743
Hsp92II	CATG	5 cut(s)	107, 142, 372, 1118, 1331
HspAI	GCGC	3 cut(s)	691, 1457, 1491
Ksp22I	TGATCA	1 cut(s)	874
Kzo9I	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
LmnI	GCTCC	2 cut(s)	1240, 1498
Lsp1109I	GCAGC	5 cut(s)	878, 1129, 1273, 1308, 1311
LweI	GCATC	3 cut(s)	268, 387, 702
MaeI	CTAG	2 cut(s)	438, 1613
MaeII	ACGT	1 cut(s)	743
MaeIII	GTNAC	8 cut(s)	7, 48, 60, 269, 298, 844, 1330, 1567
MalI	GATC	7 cut(s)	24, 195, 539, 708, 876, 1307, 1404
MbiI	CCGCTC	1 cut(s)	347
MboI	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
MboII	GAAGA	7 cut(s)	304, 415, 444, 690, 719, 745, 1490
MfeI	CAATTG	1 cut(s)	129
MhlI	GDGCHC	4 cut(s)	556, 1123, 1245, 1374
MlsI	TGGCCA	1 cut(s)	861
MluCI	AATT	4 cut(s)	129, 1027, 1311, 1344
MluNI	TGGCCA	1 cut(s)	861
MlyI	GAGTC	4 cut(s)	164, 180, 1034, 1220
MmeI	TCCRAC	3 cut(s)	699, 1194, 1524
Mox20I	TGGCCA	1 cut(s)	861
MroXI	GAANNNNTTC	1 cut(s)	726
MscI	TGGCCA	1 cut(s)	861
MseI	TTAA	9 cut(s)	467, 824, 918, 1011, 1019, 1026, 1272, 1343, 1621
MslI	CAYNNNNRTG	2 cut(s)	1411, 1527
Msp20I	TGGCCA	1 cut(s)	861
MspCI	CTTAAG	1 cut(s)	1271
MspI	CCGG	7 cut(s)	15, 29, 35, 89, 430, 615, 1237
MspR9I	CCNGG	7 cut(s)	16, 30, 36, 90, 911, 1238, 1352
MunI	CAATTG	1 cut(s)	129
Mva1269I	GAATGC	1 cut(s)	1053
MvaI	CCWGG	2 cut(s)	911, 1352
MvnI	CGCG	2 cut(s)	898, 1459
MwoI	GCNNNNNNNGC	2 cut(s)	587, 858
NciI	CCSGG	5 cut(s)	16, 30, 36, 90, 1238
NdeII	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
NlaIII	CATG	5 cut(s)	107, 142, 372, 1118, 1331
NlaIV	GGNNCC	3 cut(s)	33, 661, 1048
NmuCI	GTSAC	4 cut(s)	48, 298, 844, 1567
NspI	RCATGY	3 cut(s)	107, 142, 1331
PaeI	GCATGC	2 cut(s)	107, 142
PaeR7I	CTCGAG	2 cut(s)	401, 525
PctI	GAATGC	1 cut(s)	1053
PdmI	GAANNNNTTC	1 cut(s)	726
PfeI	GAWTC	6 cut(s)	254, 499, 564, 997, 1295, 1364
PflMI	CCANNNNNTGG	1 cut(s)	1043
PfoI	TCCNGGA	3 cut(s)	34, 88, 1236
PinAI	ACCGGT	1 cut(s)	429
PkrI	GCNGC	9 cut(s)	346, 583, 586, 589, 868, 1144, 1288, 1323, 1326
PleI	GAGTC	4 cut(s)	163, 179, 1034, 1220
PpsI	GAGTC	4 cut(s)	163, 179, 1034, 1220
PshAI	GACNNNNGTC	1 cut(s)	1044
PshBI	ATTAAT	2 cut(s)	918, 1026
Psp124BI	GAGCTC	2 cut(s)	556, 1245
Psp6I	CCWGG	2 cut(s)	909, 1350
PspFI	CCCAGC	1 cut(s)	1049
PspGI	CCWGG	2 cut(s)	909, 1350
PspN4I	GGNNCC	3 cut(s)	33, 661, 1048
PspPI	GGNCC	9 cut(s)	32, 378, 411, 441, 937, 947, 991, 1046, 1170
PspXI	VCTCGAGB	1 cut(s)	401
PstI	CTGCAG	2 cut(s)	170, 1105
PstNI	CAGNNNCTG	2 cut(s)	872, 1043
RsaI	GTAC	3 cut(s)	76, 901, 1203
RsaNI	GTAC	3 cut(s)	75, 900, 1202
RseI	CAYNNNNRTG	2 cut(s)	1411, 1527
SacI	GAGCTC	2 cut(s)	556, 1245
SalI	GTCGAC	1 cut(s)	173
SaqAI	TTAA	9 cut(s)	467, 824, 918, 1011, 1019, 1026, 1272, 1343, 1621
SatI	GCNGC	9 cut(s)	345, 582, 585, 588, 867, 1143, 1287, 1322, 1325
Sau3AI	GATC	7 cut(s)	22, 193, 537, 706, 874, 1305, 1402
Sau96I	GGNCC	9 cut(s)	32, 378, 411, 441, 937, 947, 991, 1046, 1170
SchI	GAGTC	4 cut(s)	164, 180, 1034, 1220
ScrFI	CCNGG	7 cut(s)	16, 30, 36, 90, 911, 1238, 1352
SduI	GDGCHC	4 cut(s)	556, 1123, 1245, 1374
SfaNI	GCATC	3 cut(s)	268, 387, 702
SfcI	CTRYAG	3 cut(s)	166, 519, 1101
Sfr274I	CTCGAG	2 cut(s)	401, 525
SinI	GGWCC	8 cut(s)	32, 378, 411, 937, 947, 991, 1046, 1170
SlaI	CTCGAG	2 cut(s)	401, 525
SmiMI	CAYNNNNRTG	2 cut(s)	1411, 1527
SmlI	CTYRAG	6 cut(s)	265, 401, 525, 664, 1205, 1271
SmoI	CTYRAG	6 cut(s)	265, 401, 525, 664, 1205, 1271
SpeI	ACTAGT	1 cut(s)	1612
SphI	GCATGC	2 cut(s)	107, 142
Sse9I	AATT	4 cut(s)	129, 1027, 1311, 1344
SsiI	CCGC	9 cut(s)	218, 284, 345, 579, 582, 585, 588, 598, 1459
SspMI	CTAG	2 cut(s)	438, 1613
SstI	GAGCTC	2 cut(s)	556, 1245
StyD4I	CCNGG	7 cut(s)	14, 28, 34, 88, 909, 1236, 1350
StyI	CCWWGG	1 cut(s)	840
TaaI	ACNGT	3 cut(s)	1198, 1376, 1500
TaiI	ACGT	1 cut(s)	746
TaqI	TCGA	9 cut(s)	174, 402, 426, 446, 526, 534, 540, 1379, 1418
TaqII	GACCGA	1 cut(s)	428
TasI	AATT	4 cut(s)	129, 1027, 1311, 1344
TatI	WGTACW	1 cut(s)	1201
TauI	GCSGC	4 cut(s)	347, 584, 587, 590
TfiI	GAWTC	6 cut(s)	254, 499, 564, 997, 1295, 1364
Tru1I	TTAA	9 cut(s)	467, 824, 918, 1011, 1019, 1026, 1272, 1343, 1621
Tru9I	TTAA	9 cut(s)	467, 824, 918, 1011, 1019, 1026, 1272, 1343, 1621
TscAI	CASTG	6 cut(s)	494, 853, 988, 1087, 1379, 1447
TseFI	GTSAC	4 cut(s)	48, 298, 844, 1567
TseI	GCWGC	5 cut(s)	866, 1142, 1286, 1321, 1324
Tsp45I	GTSAC	4 cut(s)	48, 298, 844, 1567
TspDTI	ATGAA	5 cut(s)	32, 409, 1242, 1377, 1545
TspGWI	ACGGA	2 cut(s)	36, 576
TspRI	CASTG	6 cut(s)	494, 853, 988, 1087, 1379, 1447
Van91I	CCANNNNNTGG	1 cut(s)	1043
Vha464I	CTTAAG	1 cut(s)	1271
VneI	GTGCAC	1 cut(s)	1119
VpaK11BI	GGWCC	8 cut(s)	32, 378, 411, 937, 947, 991, 1046, 1170
VspI	ATTAAT	2 cut(s)	918, 1026
XceI	RCATGY	3 cut(s)	107, 142, 1331
XhoI	CTCGAG	2 cut(s)	401, 525
XmiI	GTMKAC	1 cut(s)	174
XmnI	GAANNNNTTC	1 cut(s)	726
XspI	CTAG	2 cut(s)	438, 1613

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.