pycom12g23320

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0001068
Physical Location & Seq
Forward (+)
23960057 .. 23962858
2802 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1788 bp
ATGGCGTCCAACTCTTCCAGCTCTTCCAACGTTTCCAACTTTCTTCCGATTAAACTTGACCCTACCAATTACCCACTCTGGCAAGCCCAGATGCTTACCTTGCTTCGTAGCAGGAATCTCGTCTCCTTTGTTGATGGCACTAGCAAATGTCCTCCTGCCTTTCTCAAAGATGATGAGGGCATTTTTACTGATACTGTGAATCCGGAGTTTGAAGCATGGATTCAACAAGATAATATGGTTTTGTCATGGATCAAGAGGTCTGTTCATCCCACTGTGTTGGGTGCCGTAATCCGGAAAACCAGTTCTCATTCTGCATGGAACTGTCTGCGCGAACGCTATCATCTGCAGCCCACTGGCCGTCTTCTTCAACTTCGCAGTGAGCTGATGAACACCCACCGTGGCGACTCCTCCATTTCTGAGTTTCTCAGTCGTGTCAGTTGCCTTGCTGACGCCCTCTCCTTATCTGGTGCTCCTGTTTCTGACTCAGACATTGCTGCCATTGTTCTCAACAATGTTGGCCCTGCATGTGAAAGCACCGTGGCTTCTGCTCAGATCGATCGTGATGGAGCCATATCTCACAGTGCTTCAGAGGCCCTTCTGCTCACTGCTGAGCGGAAACAAAGGATGCATACTGTCTTCTCTGTTGATGCTAGACCTACTGCTCCGGCTCCTGCTCGTGGCGGTGGTCCTGGTACCTTACGTGGTCGTGGCAAAGGCTATAGAGGCATAAGTGCTAGGTCTGGAATGGCTCACATTCCTCCACACAAGCGGCACTCGAAGGAATATGAGAGGCCATTGCCGACTTCAGAGCTGCTTGCTCAACGATTCACAAAAAACTTATATGTCAAGCCATATAACAAGTCTAATGTGGATTGGACTGGAAGAATAGCTTATGCAGACCATTCTACATATAGATGGTGCGCCGTTGCTTTGGATGAGGAGAACCAATTTCCGCCTTCTGTAAATCTTAAGCCCATTTGCTTGGAGTCCTCTGAGCCGAAAGTTGAAGAAAATCGTCTAGCTTTAATCAACACTAGTCTAGGTGATGGCGGTGAGTTGGAATGGACTTCGCTAAGGAGCCCTGCGGTATCTATAGCAGAAAATGTGCTGGAAGACTTGGTATCTTCTTTTAAACACGTAAGGAATGAAATGAAGTGCGCACAGCTCAAAGAAGGAAAGCCTACTTTGATTGCTAGAGTGGGGAAAGTACTTTTTCGTAGGAGCGCTTTAGTTAACATGGAATCCATGAGAACAAATTTTTGTACTGAAATCTTGAAACAATGGAGACGATCAATGTACACAAACATTCCTGTTTCATATAAGGAAAGGATTGTGAACGAAGTTGTCCCGAAAATTGGAGTTGATTTCGAAGGGGAGAAAAATACATACCAAGTAAAGTTGTCTGATTCCACCAGACCAGATGCAACTCTCTCCTGCAAATGCCGTGTAAAGAAAGAACATGGAAAACTACAACTCTACAAGATTGAACTGAATCAACTGCGTAACATGGTTGTGGACATTTCATGCGCTACCAAAAATCTGGACCTGAGGCTGATGCTATGCACGAAGAGACTCGTCGCAGATCTGACTGACGATGAGATGCAAAGCATTCGGGATCTGATTGATTCCGCGATTCTAGATCCAGATGTGAAGGGCGGGTTGAGATGGCCTTCGGGAAGGGATTCTTCCGGAGATAAATACAAAGTTGATGGGGTTTGGCACTTAATAGCTAATACGTATAAAAATTCATCGTTCAGACTGAAAGTCAGACATGCTCGATCGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

596

Amino Acids

66.53

Weight (kDa)

9.19

Isoelectric Point (pI)

45.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_3 PF14244 14 - 51 7.7e-06 gag-polypeptide of LTR copia-type
Retrotran_gag_2 PF14223 33 - 189 1.8e-11 gag-polypeptide of LTR copia-type
DUF7903 PF25475 291 - 592 6.8e-128 Domain of unknown function (DUF7903)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1159
Acc65I GGTACC 1 cut(s) 692
AccB1I GGYRCC 2 cut(s) 281, 692
AccBSI CCGCTC 1 cut(s) 613
AccII CGCG 2 cut(s) 330, 1631
AccIII TCCGGA 3 cut(s) 202, 291, 1688
AciI CCGC 8 cut(s) 613, 681, 769, 953, 1050, 1085, 1629, 1656
AclI AACGTT 1 cut(s) 30
AclWI GGATC 3 cut(s) 257, 1623, 1634
AcoI YGGCCR 1 cut(s) 355
AcsI RAATTY 2 cut(s) 1255, 1744
AcuI CTGAAG 2 cut(s) 570, 789
AcyI GRCGYC 2 cut(s) 5, 450
AfaI GTAC 4 cut(s) 694, 1209, 1264, 1298
AfeI AGCGCT 1 cut(s) 1225
AfiI CCNNNNNNNGG 3 cut(s) 291, 677, 1355
AflII CTTAAG 1 cut(s) 968
AflIII ACRYGT 1 cut(s) 1135
AgsI TTSAA 6 cut(s) 212, 224, 368, 1007, 1276, 1487
AhdI GACNNNNNGTC 1 cut(s) 1763
AhlI ACTAGT 1 cut(s) 1034
AjnI CCWGG 1 cut(s) 688
AloI GAACNNNNNNTCC 2 cut(s) 286, 318
AluBI AGCT 7 cut(s) 21, 382, 811, 890, 1022, 1165, 1730
AluI AGCT 7 cut(s) 21, 382, 811, 890, 1022, 1165, 1730
Alw21I GWGCWC 1 cut(s) 472
Alw26I GTCTC 3 cut(s) 127, 1279, 1564
AlwI GGATC 3 cut(s) 257, 1623, 1634
Aor13HI TCCGGA 3 cut(s) 202, 291, 1688
Aor51HI AGCGCT 1 cut(s) 1225
AoxI GGCC 5 cut(s) 355, 517, 591, 791, 1667
ApeKI GCWGC 3 cut(s) 346, 494, 811
ApoI RAATTY 2 cut(s) 1255, 1744
Asp700I GAANNNNTTC 1 cut(s) 1681
Asp718I GGTACC 1 cut(s) 692
AspLEI GCGC 5 cut(s) 330, 923, 1160, 1226, 1529
AspS9I GGNCC 4 cut(s) 518, 592, 686, 1543
AsuHPI GGTGA 2 cut(s) 1055, 1064
AsuII TTCGAA 1 cut(s) 1368
AvaII GGWCC 2 cut(s) 686, 1543
AxyI CCTNAGG 1 cut(s) 1547
BanI GGYRCC 2 cut(s) 281, 692
BanII GRGCYC 1 cut(s) 1082
BauI CACGAG 1 cut(s) 675
BbsI GAAGAC 3 cut(s) 353, 628, 1119
Bbv12I GWGCWC 1 cut(s) 472
BbvI GCAGC 3 cut(s) 358, 481, 798
BccI CCATC 6 cut(s) 128, 557, 909, 1040, 1659, 1703
BceAI ACGGC 4 cut(s) 269, 342, 908, 1428
BcgI CGANNNNNNTGC 4 cut(s) 100, 134, 1592, 1626
BciT130I CCWGG 1 cut(s) 690
BcoDI GTCTC 3 cut(s) 127, 1279, 1564
BcuI ACTAGT 1 cut(s) 1034
BfaI CTAG 8 cut(s) 141, 651, 735, 1019, 1035, 1040, 1194, 1637
BfmI CTRYAG 3 cut(s) 344, 718, 1092
BfoI RGCGCY 1 cut(s) 1227
BfrI CTTAAG 1 cut(s) 968
BglII AGATCT 1 cut(s) 1582
BisI GCNGC 4 cut(s) 347, 495, 770, 812
BlpI GCTNAGC 1 cut(s) 609
BlsI GCNGC 4 cut(s) 348, 496, 771, 813
BmcAI AGTACT 1 cut(s) 1209
Bme1390I CCNGG 1 cut(s) 690
Bme18I GGWCC 2 cut(s) 686, 1543
BmeRI GACNNNNNGTC 1 cut(s) 1763
BmgT120I GGNCC 4 cut(s) 518, 592, 686, 1543
BmiI GGNNCC 5 cut(s) 283, 568, 669, 694, 1079
BmrFI CCNGG 1 cut(s) 690
BmsI GCATC 6 cut(s) 81, 615, 637, 1411, 1545, 1590
BpiI GAAGAC 3 cut(s) 353, 628, 1119
Bpu10I CCTNAGC 1 cut(s) 1073
Bpu1102I GCTNAGC 1 cut(s) 609
Bpu14I TTCGAA 1 cut(s) 1368
Bsa29I ATCGAT 2 cut(s) 555, 1781
BsaAI YACGTR 3 cut(s) 701, 1138, 1737
BsaHI GRCGYC 2 cut(s) 5, 450
BsaJI CCNNGG 2 cut(s) 397, 537
BsaWI WCCGGW 3 cut(s) 202, 291, 1688
BsaXI ACNNNNNCTCC 2 cut(s) 440, 470
Bsc4I CCNNNNNNNGG 3 cut(s) 291, 677, 1355
Bse1I ACTGG 3 cut(s) 300, 358, 883
Bse21I CCTNAGG 1 cut(s) 1547
Bse3DI GCAATG 2 cut(s) 489, 794
BseAI TCCGGA 3 cut(s) 202, 291, 1688
BseBI CCWGG 1 cut(s) 690
BseCI ATCGAT 2 cut(s) 555, 1781
BseDI CCNNGG 2 cut(s) 397, 537
BseGI GGATG 3 cut(s) 265, 630, 940
BseLI CCNNNNNNNGG 3 cut(s) 291, 677, 1355
BseMI GCAATG 2 cut(s) 489, 794
BseMII CTCAG 7 cut(s) 408, 439, 498, 563, 600, 984, 1538
BseNI ACTGG 3 cut(s) 300, 358, 883
BseRI GAGGAG 2 cut(s) 397, 953
BseXI GCAGC 3 cut(s) 358, 481, 798
Bsh1236I CGCG 2 cut(s) 330, 1631
Bsh1285I CGRYCG 2 cut(s) 559, 1781
BshFI GGCC 5 cut(s) 357, 519, 593, 793, 1669
BshNI GGYRCC 2 cut(s) 281, 692
BshVI ATCGAT 2 cut(s) 555, 1781
BsiEI CGRYCG 2 cut(s) 559, 1781
BsiHKAI GWGCWC 1 cut(s) 472
BsiSI CCGG 4 cut(s) 203, 292, 665, 1689
BslFI GGGAC 1 cut(s) 1331
BslI CCNNNNNNNGG 3 cut(s) 291, 677, 1355
BsmAI GTCTC 3 cut(s) 127, 1279, 1564
BsmBI CGTCTC 2 cut(s) 127, 1279
BsmFI GGGAC 1 cut(s) 1331
BsmI GAATGC 1 cut(s) 1608
BsnI GGCC 5 cut(s) 357, 519, 593, 793, 1669
Bsp119I TTCGAA 1 cut(s) 1368
Bsp1286I GDGCHC 2 cut(s) 472, 1082
Bsp13I TCCGGA 3 cut(s) 202, 291, 1688
Bsp1407I TGTACA 1 cut(s) 1296
Bsp143I GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
Bsp1720I GCTNAGC 1 cut(s) 609
BspACI CCGC 8 cut(s) 613, 681, 769, 953, 1050, 1085, 1629, 1656
BspANI GGCC 5 cut(s) 357, 519, 593, 793, 1669
BspCNI CTCAG 7 cut(s) 409, 438, 497, 562, 601, 985, 1539
BspDI ATCGAT 2 cut(s) 555, 1781
BspEI TCCGGA 3 cut(s) 202, 291, 1688
BspFNI CGCG 2 cut(s) 330, 1631
BspLI GGNNCC 5 cut(s) 283, 568, 669, 694, 1079
BspMAI CTGCAG 1 cut(s) 348
BspPI GGATC 3 cut(s) 257, 1623, 1634
BspQI GCTCTTC 1 cut(s) 28
BspT104I TTCGAA 1 cut(s) 1368
BspT107I GGYRCC 2 cut(s) 281, 692
BspTI CTTAAG 1 cut(s) 968
BsrBI CCGCTC 1 cut(s) 613
BsrDI GCAATG 2 cut(s) 489, 794
BsrGI TGTACA 1 cut(s) 1296
BsrI ACTGG 3 cut(s) 300, 358, 883
BssECI CCNNGG 2 cut(s) 397, 537
BssMI GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
BssNI GRCGYC 2 cut(s) 5, 450
BssSI CACGAG 1 cut(s) 675
Bst2BI CACGAG 1 cut(s) 675
Bst2UI CCWGG 1 cut(s) 690
Bst4CI ACNGT 7 cut(s) 196, 274, 323, 398, 538, 581, 634
Bst6I CTCTTC 3 cut(s) 19, 28, 1562
BstACI GRCGYC 2 cut(s) 5, 450
BstAFI CTTAAG 1 cut(s) 968
BstAUI TGTACA 1 cut(s) 1296
BstBAI YACGTR 3 cut(s) 701, 1138, 1737
BstBI TTCGAA 1 cut(s) 1368
BstC8I GCNNGC 2 cut(s) 84, 816
BstDEI CTNAG 8 cut(s) 417, 425, 484, 549, 609, 993, 1073, 1547
BstDSI CCRYGG 2 cut(s) 397, 537
BstF5I GGATG 3 cut(s) 265, 630, 940
BstFNI CGCG 2 cut(s) 330, 1631
BstH2I RGCGCY 1 cut(s) 1227
BstHHI GCGC 5 cut(s) 330, 923, 1160, 1226, 1529
BstKTI GATC 8 cut(s) 252, 555, 559, 1292, 1585, 1618, 1642, 1781
BstMAI GTCTC 3 cut(s) 127, 1279, 1564
BstMBI GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
BstMCI CGRYCG 2 cut(s) 559, 1781
BstMWI GCNNNNNNNGC 3 cut(s) 100, 590, 723
BstNI CCWGG 1 cut(s) 690
BstNSI RCATGY 2 cut(s) 528, 1775
BstSCI CCNGG 1 cut(s) 688
BstSFI CTRYAG 3 cut(s) 344, 718, 1092
BstSNI TACGTA 1 cut(s) 1737
BstUI CGCG 2 cut(s) 330, 1631
BstV1I GCAGC 3 cut(s) 358, 481, 798
BstV2I GAAGAC 3 cut(s) 353, 628, 1119
BstX2I RGATCY 3 cut(s) 1582, 1615, 1639
BstXI CCANNNNNNTGG 3 cut(s) 277, 982, 1540
BstYI RGATCY 3 cut(s) 1582, 1615, 1639
Bsu15I ATCGAT 2 cut(s) 555, 1781
Bsu36I CCTNAGG 1 cut(s) 1547
BsuRI GGCC 5 cut(s) 357, 519, 593, 793, 1669
BsuTUI ATCGAT 2 cut(s) 555, 1781
BtgI CCRYGG 2 cut(s) 397, 537
BtsCI GGATG 3 cut(s) 265, 630, 940
BtsI GCAGTG 2 cut(s) 382, 603
BtsIMutI CAGTG 5 cut(s) 270, 351, 382, 586, 603
Cac8I GCNNGC 2 cut(s) 84, 816
CfoI GCGC 5 cut(s) 330, 923, 1160, 1226, 1529
Cfr13I GGNCC 4 cut(s) 518, 592, 686, 1543
ClaI ATCGAT 2 cut(s) 555, 1781
CseI GACGC 1 cut(s) 458
Csp6I GTAC 4 cut(s) 693, 1208, 1263, 1297
CviQI GTAC 4 cut(s) 693, 1208, 1263, 1297
DdeI CTNAG 8 cut(s) 417, 425, 484, 549, 609, 993, 1073, 1547
DpnI GATC 8 cut(s) 251, 554, 558, 1291, 1584, 1617, 1641, 1780
DpnII GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
DraI TTTAAA 1 cut(s) 1132
DriI GACNNNNNGTC 1 cut(s) 1763
EaeI YGGCCR 1 cut(s) 355
Eam1104I CTCTTC 3 cut(s) 19, 28, 1562
Eam1105I GACNNNNNGTC 1 cut(s) 1763
EarI CTCTTC 3 cut(s) 19, 28, 1562
EciI GGCGGA 1 cut(s) 942
Eco105I TACGTA 1 cut(s) 1737
Eco24I GRGCYC 1 cut(s) 1082
Eco47I GGWCC 2 cut(s) 686, 1543
Eco47III AGCGCT 1 cut(s) 1225
Eco57I CTGAAG 2 cut(s) 570, 789
Eco81I CCTNAGG 1 cut(s) 1547
EcoO109I RGGNCCY 1 cut(s) 592
EcoRII CCWGG 1 cut(s) 688
EcoT22I ATGCAT 1 cut(s) 630
EcoT38I GRGCYC 1 cut(s) 1082
Esp3I CGTCTC 2 cut(s) 127, 1279
FalI AAGNNNNNCTT 4 cut(s) 874, 906, 1669, 1701
FaqI GGGAC 1 cut(s) 1331
FauI CCCGC 1 cut(s) 1649
Fnu4HI GCNGC 4 cut(s) 347, 495, 770, 812
FokI GGATG 3 cut(s) 252, 637, 947
FriOI GRGCYC 1 cut(s) 1082
Fsp4HI GCNGC 4 cut(s) 347, 495, 770, 812
FspAI RTGCGCAY 1 cut(s) 1159
FspBI CTAG 8 cut(s) 141, 651, 735, 1019, 1035, 1040, 1194, 1637
FspI TGCGCA 1 cut(s) 1159
GlaI GCGC 5 cut(s) 329, 922, 1159, 1225, 1528
GluI GCNGC 4 cut(s) 347, 495, 770, 812
HaeII RGCGCY 1 cut(s) 1227
HaeIII GGCC 5 cut(s) 357, 519, 593, 793, 1669
HapII CCGG 4 cut(s) 203, 292, 665, 1689
HgaI GACGC 1 cut(s) 458
HhaI GCGC 5 cut(s) 330, 923, 1160, 1226, 1529
Hin1I GRCGYC 2 cut(s) 5, 450
Hin6I GCGC 5 cut(s) 328, 921, 1158, 1224, 1527
HinP1I GCGC 5 cut(s) 328, 921, 1158, 1224, 1527
HincII GTYRAC 1 cut(s) 1234
HindII GTYRAC 1 cut(s) 1234
HpaI GTTAAC 1 cut(s) 1234
HpaII CCGG 4 cut(s) 203, 292, 665, 1689
HphI GGTGA 2 cut(s) 1055, 1064
Hpy166II GTNNAC 4 cut(s) 1234, 1299, 1336, 1516
Hpy8I GTNNAC 4 cut(s) 1234, 1299, 1336, 1516
Hpy99I CGWCG 1 cut(s) 1580
HpyAV CCTTC 8 cut(s) 605, 772, 966, 1166, 1364, 1645, 1671, 1680
HpyCH4III ACNGT 7 cut(s) 196, 274, 323, 398, 538, 581, 634
HpyCH4IV ACGT 4 cut(s) 30, 700, 1137, 1736
HpyCH4V TGCA 9 cut(s) 314, 346, 524, 628, 896, 1424, 1437, 1563, 1603
HpyF10VI GCNNNNNNNGC 3 cut(s) 100, 590, 723
HpyF3I CTNAG 8 cut(s) 417, 425, 484, 549, 609, 993, 1073, 1547
HpySE526I ACGT 4 cut(s) 30, 700, 1137, 1736
Hsp92I GRCGYC 2 cut(s) 5, 450
HspAI GCGC 5 cut(s) 328, 921, 1158, 1224, 1527
Kpn2I TCCGGA 3 cut(s) 202, 291, 1688
KpnI GGTACC 1 cut(s) 696
KspAI GTTAAC 1 cut(s) 1234
Kzo9I GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
LguI GCTCTTC 1 cut(s) 28
LmnI GCTCC 6 cut(s) 475, 566, 667, 673, 1077, 1221
Lsp1109I GCAGC 3 cut(s) 358, 481, 798
LweI GCATC 6 cut(s) 81, 615, 637, 1411, 1545, 1590
MaeI CTAG 8 cut(s) 141, 651, 735, 1019, 1035, 1040, 1194, 1637
MaeII ACGT 4 cut(s) 30, 700, 1137, 1736
MaeIII GTNAC 1 cut(s) 1502
MalI GATC 8 cut(s) 251, 554, 558, 1291, 1584, 1617, 1641, 1780
MbiI CCGCTC 1 cut(s) 613
MboI GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
MflI RGATCY 3 cut(s) 1582, 1615, 1639
MhlI GDGCHC 2 cut(s) 472, 1082
MluCI AATT 5 cut(s) 67, 947, 1255, 1353, 1744
MlyI GAGTC 4 cut(s) 398, 476, 995, 1566
MmeI TCCRAC 4 cut(s) 33, 51, 60, 1038
Mph1103I ATGCAT 1 cut(s) 630
MroI TCCGGA 3 cut(s) 202, 291, 1688
MroXI GAANNNNTTC 1 cut(s) 1681
MseI TTAA 6 cut(s) 51, 969, 1025, 1131, 1233, 1724
MslI CAYNNNNRTG 2 cut(s) 913, 1511
MspCI CTTAAG 1 cut(s) 968
MspI CCGG 4 cut(s) 203, 292, 665, 1689
MspR9I CCNGG 1 cut(s) 690
Mva1269I GAATGC 1 cut(s) 1608
MvaI CCWGG 1 cut(s) 690
MvnI CGCG 2 cut(s) 330, 1631
MwoI GCNNNNNNNGC 3 cut(s) 100, 590, 723
NdeII GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
NlaIV GGNNCC 5 cut(s) 283, 568, 669, 694, 1079
NsbI TGCGCA 1 cut(s) 1159
NsiI ATGCAT 1 cut(s) 630
NspI RCATGY 2 cut(s) 528, 1775
NspV TTCGAA 1 cut(s) 1368
PciSI GCTCTTC 1 cut(s) 28
PctI GAATGC 1 cut(s) 1608
PdmI GAANNNNTTC 1 cut(s) 1681
PkrI GCNGC 4 cut(s) 348, 496, 771, 813
Ple19I CGATCG 2 cut(s) 559, 1781
PleI GAGTC 4 cut(s) 398, 476, 994, 1566
PpsI GAGTC 4 cut(s) 398, 476, 994, 1566
Ppu21I YACGTR 3 cut(s) 701, 1138, 1737
Psp1406I AACGTT 1 cut(s) 30
Psp6I CCWGG 1 cut(s) 688
PspGI CCWGG 1 cut(s) 688
PspN4I GGNNCC 5 cut(s) 283, 568, 669, 694, 1079
PspPI GGNCC 4 cut(s) 518, 592, 686, 1543
PstI CTGCAG 1 cut(s) 348
PsuI RGATCY 3 cut(s) 1582, 1615, 1639
PvuI CGATCG 2 cut(s) 559, 1781
RsaI GTAC 4 cut(s) 694, 1209, 1264, 1298
RsaNI GTAC 4 cut(s) 693, 1208, 1263, 1297
RseI CAYNNNNRTG 2 cut(s) 913, 1511
SapI GCTCTTC 1 cut(s) 28
SaqAI TTAA 6 cut(s) 51, 969, 1025, 1131, 1233, 1724
SatI GCNGC 4 cut(s) 347, 495, 770, 812
Sau3AI GATC 8 cut(s) 249, 552, 556, 1289, 1582, 1615, 1639, 1778
Sau96I GGNCC 4 cut(s) 518, 592, 686, 1543
ScaI AGTACT 1 cut(s) 1209
SchI GAGTC 4 cut(s) 398, 476, 995, 1566
ScrFI CCNGG 1 cut(s) 690
SduI GDGCHC 2 cut(s) 472, 1082
SfaNI GCATC 6 cut(s) 81, 615, 637, 1411, 1545, 1590
SfcI CTRYAG 3 cut(s) 344, 718, 1092
SfuI TTCGAA 1 cut(s) 1368
SinI GGWCC 2 cut(s) 686, 1543
SmiMI CAYNNNNRTG 2 cut(s) 913, 1511
SmlI CTYRAG 1 cut(s) 968
SmoI CTYRAG 1 cut(s) 968
SnaBI TACGTA 1 cut(s) 1737
SpeI ACTAGT 1 cut(s) 1034
Sse9I AATT 5 cut(s) 67, 947, 1255, 1353, 1744
SsiI CCGC 8 cut(s) 613, 681, 769, 953, 1050, 1085, 1629, 1656
SspMI CTAG 8 cut(s) 141, 651, 735, 1019, 1035, 1040, 1194, 1637
StyD4I CCNGG 1 cut(s) 688
TaaI ACNGT 7 cut(s) 196, 274, 323, 398, 538, 581, 634
TaiI ACGT 4 cut(s) 33, 703, 1140, 1739
TaqI TCGA 5 cut(s) 555, 776, 1368, 1777, 1781
TasI AATT 5 cut(s) 67, 947, 1255, 1353, 1744
TatI WGTACW 3 cut(s) 1207, 1262, 1296
TauI GCSGC 1 cut(s) 772
Tru1I TTAA 6 cut(s) 51, 969, 1025, 1131, 1233, 1724
Tru9I TTAA 6 cut(s) 51, 969, 1025, 1131, 1233, 1724
TscAI CASTG 5 cut(s) 277, 358, 382, 586, 610
TseI GCWGC 3 cut(s) 346, 494, 811
TspDTI ATGAA 7 cut(s) 254, 401, 1161, 1166, 1305, 1512, 1737
TspRI CASTG 5 cut(s) 277, 358, 382, 586, 610
Vha464I CTTAAG 1 cut(s) 968
VpaK11BI GGWCC 2 cut(s) 686, 1543
XapI RAATTY 2 cut(s) 1255, 1744
XbaI TCTAGA 1 cut(s) 1636
XceI RCATGY 2 cut(s) 528, 1775
XmnI GAANNNNTTC 1 cut(s) 1681
XspI CTAG 8 cut(s) 141, 651, 735, 1019, 1035, 1040, 1194, 1637
ZrmI AGTACT 1 cut(s) 1209
Zsp2I ATGCAT 1 cut(s) 630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.