pycom12g23330

transposition, RNA-mediated

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr12
OG0001068
Physical Location & Seq
Forward (+)
23965237 .. 23968026
2790 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1842 bp
ATGGCGTCCAACTCTTCCAGCACTTCCAACGCTTCCAACTTTCTTACGATTAAACTTGACCCTACCAATTACCCTCTCTGGCAAGCCCAGATGCTTACCTTGCTTCGTAGCAGGAATCTCGTCTCCTTTGCTGATGGCGCTAGCAAATGTCCTCCAGCCTTTCTCAAAGATGATGAGGGCAAACTTACTGATACTGTGAATCCGGAGTTTGAAGCATGGATTCAACAAGATAATATGGTTTTGTCGTGCGGGACTGATCGATCAAGAGCTCTTTCTCATTCTGCATGGACCTGTCTGCGAGAAACCTATGATTTGCAGCCCACTGGCCGTCTTCTTCAACTTCGCAGTGAGCTGATGAACACCCACCGCGGCGACTCCTCCATTTCTGAGTTTCTCGGTCATGTCAGTTGCCTTGCTGACGCCCTCTCCTTATCTGGTGCTCCTTTTTCTGACTCAGACATTTCTTCCATTGTTCTCAACAATGTTGGCCATGCATGTGAAACCACCATGGCTTCTGCTCAGGATCGTGATGGGGCCATATCTCACACTGCTTCAGAGGCCCTTCTGCTCACTGCTGAGCGGAAACAAAGGAAGCATACTGTCTTCACTGCTGATACTAGATCCACTGCTCCCGCTGCTGCTCGTGGCGGTCGTCCTGGTACCTTACGTGGTCGTGGCAAAGGCTATAGAGGCATTCGTGGTGGTATGAGTACTCTGTTTTTAATCCTCTTTTTTTCTTCTTTTTTGTTTTGGTTTGGCCTCATTTTCATCTTTGTTATAGGCATAAGTGCTAGTTCAGGAATGGCTCACTTTCCACGACACAAGTGGCACTCGAAGGAATATGAGAGGCCATCGCTGACTTCAGAGCTGCTTGCTCAACAATTCAAGAAAAACTTATATGTCAAGACATATAACAAGTCTAATGTGGATTGGACTGGAAGAATAGCTCATGCAGACCATTCTACATATAGATGGTGCGCCGTTGCTTTGGGTGAGGAGAACCAATTTCCACCTTCTGTTAATCTTAAGCCCATTTGCTTGGATTCCACTGAGCCGAAAGTTGAAGAAAATCGTCTAGCTTTAATCAACCCTAGTCTAGATGATGGCGGTGAGTTGAAATGGAATTCGCCAAGGAGCCCTGGGGTATCTATAGCAGAAAATGTGCTGGAAGACTTGGTTTCTTCTTTTAAACACCTGAGGAATGAAATGAATTGCGCACAGCTCAAAGAAGGAAAGCCTACTTTGATTGCTAGAGTGGGAAAAGTACTTTTTCGTAGGAGCCCTTTAGTTAACATGGAAGACATCAGAACAAATTTGTGTACTGAAATCTTGAAACAATGGAGACGATCATTGTACACAAACATTCCTGTTTCATATAAGGAAAGGATTGTGAACGAAGTTATCCCTAAAATTGGAGTTGATTTCGAAGGGGAGAAAGATACATACCAAGTAAAGTTGTCTGATTCGACCAGACCAGATGCAACTCTCTCCTGCAAATGCCGTGTAATGAAAGAACATGGAAAGCTACAACTCTACAAGATTGAACTGAATCAACTGCGTAACATGGTCGTGGACATTTCATGCACTACCAAAAATCTGGACCTGAGACTGATGCTATGCACGAAGAGACTCGTCACAGATCTGACTGACGATGAGATGCAATGCATTCGGAATCTGATTAATTCGGCGATTATAGATCCAGATGTGAAGGGCGGGTTGAGATGGAATTCGGGAAAGGATTCTTCCGGAAAATACAAAGTTGATGGGGTTTGGCACGTAATAGCTAATACGTATAAAAATTCATCGTTCAGACTGAAAGTCAGACATGCGGATCAGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

614

Amino Acids

68.68

Weight (kDa)

8.91

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7903 PF25475 310 - 612 3.9e-126 Domain of unknown function (DUF7903)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1216
Acc65I GGTACC 1 cut(s) 659
AccB1I GGYRCC 1 cut(s) 659
AccBSI CCGCTC 1 cut(s) 580
AccII CGCG 1 cut(s) 369
AccIII TCCGGA 2 cut(s) 202, 1745
AciI CCGC 9 cut(s) 249, 367, 369, 580, 633, 648, 1107, 1713, 1829
AclWI GGATC 4 cut(s) 531, 615, 1691, 1839
AcoI YGGCCR 2 cut(s) 325, 487
AcsI RAATTY 4 cut(s) 1123, 1312, 1726, 1798
AcuI CTGAAG 2 cut(s) 537, 846
AcyI GRCGYC 2 cut(s) 5, 420
AfaI GTAC 5 cut(s) 661, 712, 1266, 1321, 1355
AfiI CCNNNNNNNGG 1 cut(s) 1412
AflII CTTAAG 1 cut(s) 1025
AgsI TTSAA 8 cut(s) 212, 224, 338, 886, 1064, 1117, 1333, 1544
AhdI GACNNNNNGTC 1 cut(s) 1817
AjnI CCWGG 2 cut(s) 655, 1138
AluBI AGCT 8 cut(s) 269, 352, 868, 947, 1079, 1222, 1525, 1784
AluI AGCT 8 cut(s) 269, 352, 868, 947, 1079, 1222, 1525, 1784
Alw21I GWGCWC 2 cut(s) 271, 442
Alw26I GTCTC 4 cut(s) 127, 1336, 1600, 1621
AlwI GGATC 4 cut(s) 531, 615, 1691, 1839
Aor13HI TCCGGA 2 cut(s) 202, 1745
AoxI GGCC 6 cut(s) 325, 487, 534, 558, 757, 848
ApeKI GCWGC 4 cut(s) 316, 635, 638, 868
ApoI RAATTY 4 cut(s) 1123, 1312, 1726, 1798
AseI ATTAAT 1 cut(s) 1680
Asp700I GAANNNNTTC 1 cut(s) 1738
Asp718I GGTACC 1 cut(s) 659
AspLEI GCGC 3 cut(s) 140, 980, 1217
AspS9I GGNCC 4 cut(s) 288, 534, 559, 1600
AsuHPI GGTGA 2 cut(s) 1004, 1121
AsuII TTCGAA 1 cut(s) 1425
AsuNHI GCTAGC 1 cut(s) 140
AvaII GGWCC 2 cut(s) 288, 1600
AxyI CCTNAGG 1 cut(s) 1196
BalI TGGCCA 1 cut(s) 489
BanI GGYRCC 1 cut(s) 659
BanII GRGCYC 3 cut(s) 271, 1139, 1283
BauI CACGAG 1 cut(s) 642
BbsI GAAGAC 4 cut(s) 323, 595, 1176, 1305
Bbv12I GWGCWC 2 cut(s) 271, 442
BbvI GCAGC 4 cut(s) 328, 622, 625, 855
BccI CCATC 7 cut(s) 128, 524, 859, 966, 1097, 1716, 1757
BceAI ACGGC 3 cut(s) 312, 965, 1485
BcgI CGANNNNNNTGC 4 cut(s) 100, 134, 1649, 1683
BciT130I CCWGG 2 cut(s) 657, 1140
BcoDI GTCTC 4 cut(s) 127, 1336, 1600, 1621
BfaI CTAG 7 cut(s) 141, 618, 792, 1076, 1092, 1097, 1251
BfmI CTRYAG 2 cut(s) 685, 1149
BfoI RGCGCY 1 cut(s) 141
BfrI CTTAAG 1 cut(s) 1025
BglII AGATCT 1 cut(s) 1639
BisI GCNGC 5 cut(s) 317, 370, 636, 639, 869
BlpI GCTNAGC 1 cut(s) 576
BlsI GCNGC 5 cut(s) 318, 371, 637, 640, 870
BmcAI AGTACT 2 cut(s) 712, 1266
Bme1390I CCNGG 2 cut(s) 657, 1140
Bme18I GGWCC 2 cut(s) 288, 1600
BmeRI GACNNNNNGTC 1 cut(s) 1817
BmgT120I GGNCC 4 cut(s) 288, 534, 559, 1600
BmiI GGNNCC 4 cut(s) 535, 661, 1136, 1280
BmrFI CCNGG 2 cut(s) 657, 1140
BmsI GCATC 4 cut(s) 81, 1468, 1602, 1647
BmtI GCTAGC 1 cut(s) 144
BpiI GAAGAC 4 cut(s) 323, 595, 1176, 1305
BpmI CTGGAG 1 cut(s) 138
Bpu10I CCTNAGC 1 cut(s) 519
Bpu1102I GCTNAGC 1 cut(s) 576
Bpu14I TTCGAA 1 cut(s) 1425
Bsa29I ATCGAT 1 cut(s) 259
BsaAI YACGTR 3 cut(s) 668, 1777, 1791
BsaHI GRCGYC 2 cut(s) 5, 420
BsaJI CCNNGG 5 cut(s) 367, 507, 1130, 1138, 1139
BsaWI WCCGGW 2 cut(s) 202, 1745
BsaXI ACNNNNNCTCC 2 cut(s) 410, 440
Bsc4I CCNNNNNNNGG 1 cut(s) 1412
Bse1I ACTGG 2 cut(s) 328, 940
Bse21I CCTNAGG 1 cut(s) 1196
Bse3DI GCAATG 1 cut(s) 1667
BseAI TCCGGA 2 cut(s) 202, 1745
BseBI CCWGG 2 cut(s) 657, 1140
BseCI ATCGAT 1 cut(s) 259
BseDI CCNNGG 5 cut(s) 367, 507, 1130, 1138, 1139
BseLI CCNNNNNNNGG 1 cut(s) 1412
BseMI GCAATG 1 cut(s) 1667
BseMII CTCAG 7 cut(s) 378, 468, 533, 567, 1041, 1187, 1595
BseNI ACTGG 2 cut(s) 328, 940
BseRI GAGGAG 2 cut(s) 367, 1010
BseXI GCAGC 4 cut(s) 328, 622, 625, 855
Bsh1236I CGCG 1 cut(s) 369
Bsh1285I CGRYCG 1 cut(s) 652
BshFI GGCC 6 cut(s) 327, 489, 536, 560, 759, 850
BshNI GGYRCC 1 cut(s) 659
BshVI ATCGAT 1 cut(s) 259
BsiEI CGRYCG 1 cut(s) 652
BsiHKAI GWGCWC 2 cut(s) 271, 442
BsiSI CCGG 2 cut(s) 203, 1746
BslFI GGGAC 1 cut(s) 265
BslI CCNNNNNNNGG 1 cut(s) 1412
BsmAI GTCTC 4 cut(s) 127, 1336, 1600, 1621
BsmBI CGTCTC 2 cut(s) 127, 1336
BsmFI GGGAC 1 cut(s) 265
BsmI GAATGC 2 cut(s) 693, 1665
BsnI GGCC 6 cut(s) 327, 489, 536, 560, 759, 850
Bsp119I TTCGAA 1 cut(s) 1425
Bsp1286I GDGCHC 4 cut(s) 271, 442, 1139, 1283
Bsp13I TCCGGA 2 cut(s) 202, 1745
Bsp1407I TGTACA 1 cut(s) 1353
Bsp143I GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
Bsp1720I GCTNAGC 1 cut(s) 576
Bsp19I CCATGG 1 cut(s) 507
BspACI CCGC 9 cut(s) 249, 367, 369, 580, 633, 648, 1107, 1713, 1829
BspANI GGCC 6 cut(s) 327, 489, 536, 560, 759, 850
BspCNI CTCAG 7 cut(s) 379, 467, 532, 568, 1042, 1188, 1596
BspDI ATCGAT 1 cut(s) 259
BspEI TCCGGA 2 cut(s) 202, 1745
BspFNI CGCG 1 cut(s) 369
BspLI GGNNCC 4 cut(s) 535, 661, 1136, 1280
BspOI GCTAGC 1 cut(s) 144
BspPI GGATC 4 cut(s) 531, 615, 1691, 1839
BspT104I TTCGAA 1 cut(s) 1425
BspT107I GGYRCC 1 cut(s) 659
BspTI CTTAAG 1 cut(s) 1025
BsrBI CCGCTC 1 cut(s) 580
BsrDI GCAATG 1 cut(s) 1667
BsrGI TGTACA 1 cut(s) 1353
BsrI ACTGG 2 cut(s) 328, 940
BssECI CCNNGG 5 cut(s) 367, 507, 1130, 1138, 1139
BssMI GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
BssNI GRCGYC 2 cut(s) 5, 420
BssSI CACGAG 1 cut(s) 642
BssT1I CCWWGG 2 cut(s) 507, 1130
Bst2BI CACGAG 1 cut(s) 642
Bst2UI CCWGG 2 cut(s) 657, 1140
Bst4CI ACNGT 2 cut(s) 196, 601
Bst6I CTCTTC 2 cut(s) 19, 1619
BstACI GRCGYC 2 cut(s) 5, 420
BstAFI CTTAAG 1 cut(s) 1025
BstAUI TGTACA 1 cut(s) 1353
BstBAI YACGTR 3 cut(s) 668, 1777, 1791
BstBI TTCGAA 1 cut(s) 1425
BstC8I GCNNGC 3 cut(s) 84, 142, 873
BstDEI CTNAG 7 cut(s) 387, 454, 519, 576, 1050, 1196, 1604
BstDSI CCRYGG 2 cut(s) 367, 507
BstFNI CGCG 1 cut(s) 369
BstH2I RGCGCY 1 cut(s) 141
BstHHI GCGC 3 cut(s) 140, 980, 1217
BstKTI GATC 8 cut(s) 259, 263, 526, 623, 1349, 1642, 1699, 1834
BstMAI GTCTC 4 cut(s) 127, 1336, 1600, 1621
BstMBI GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
BstMCI CGRYCG 1 cut(s) 652
BstMWI GCNNNNNNNGC 5 cut(s) 100, 137, 557, 635, 690
BstNI CCWGG 2 cut(s) 657, 1140
BstNSI RCATGY 2 cut(s) 498, 1829
BstSCI CCNGG 2 cut(s) 655, 1138
BstSFI CTRYAG 2 cut(s) 685, 1149
BstSNI TACGTA 1 cut(s) 1791
BstUI CGCG 1 cut(s) 369
BstV1I GCAGC 4 cut(s) 328, 622, 625, 855
BstV2I GAAGAC 4 cut(s) 323, 595, 1176, 1305
BstX2I RGATCY 3 cut(s) 620, 1639, 1696
BstXI CCANNNNNNTGG 2 cut(s) 1039, 1597
BstYI RGATCY 3 cut(s) 620, 1639, 1696
Bsu15I ATCGAT 1 cut(s) 259
Bsu36I CCTNAGG 1 cut(s) 1196
BsuRI GGCC 6 cut(s) 327, 489, 536, 560, 759, 850
BsuTUI ATCGAT 1 cut(s) 259
BtgI CCRYGG 2 cut(s) 367, 507
BtgZI GCGATG 1 cut(s) 837
BtsI GCAGTG 5 cut(s) 352, 546, 570, 606, 624
BtsIMutI CAGTG 7 cut(s) 321, 352, 546, 570, 606, 624, 1047
Cac8I GCNNGC 3 cut(s) 84, 142, 873
CfoI GCGC 3 cut(s) 140, 980, 1217
Cfr13I GGNCC 4 cut(s) 288, 534, 559, 1600
Cfr42I CCGCGG 1 cut(s) 370
ClaI ATCGAT 1 cut(s) 259
CseI GACGC 1 cut(s) 428
Csp6I GTAC 5 cut(s) 660, 711, 1265, 1320, 1354
CviQI GTAC 5 cut(s) 660, 711, 1265, 1320, 1354
DdeI CTNAG 7 cut(s) 387, 454, 519, 576, 1050, 1196, 1604
DpnI GATC 8 cut(s) 258, 262, 525, 622, 1348, 1641, 1698, 1833
DpnII GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
DraI TTTAAA 1 cut(s) 1189
DriI GACNNNNNGTC 1 cut(s) 1817
EaeI YGGCCR 2 cut(s) 325, 487
Eam1104I CTCTTC 2 cut(s) 19, 1619
Eam1105I GACNNNNNGTC 1 cut(s) 1817
EarI CTCTTC 2 cut(s) 19, 1619
Ecl136II GAGCTC 1 cut(s) 269
Eco105I TACGTA 1 cut(s) 1791
Eco130I CCWWGG 2 cut(s) 507, 1130
Eco24I GRGCYC 3 cut(s) 271, 1139, 1283
Eco47I GGWCC 2 cut(s) 288, 1600
Eco53kI GAGCTC 1 cut(s) 269
Eco57I CTGAAG 2 cut(s) 537, 846
Eco81I CCTNAGG 1 cut(s) 1196
EcoICRI GAGCTC 1 cut(s) 269
EcoO109I RGGNCCY 1 cut(s) 559
EcoRI GAATTC 2 cut(s) 1123, 1726
EcoRII CCWGG 2 cut(s) 655, 1138
EcoT14I CCWWGG 2 cut(s) 507, 1130
EcoT22I ATGCAT 2 cut(s) 496, 1667
EcoT38I GRGCYC 3 cut(s) 271, 1139, 1283
ErhI CCWWGG 2 cut(s) 507, 1130
Esp3I CGTCTC 2 cut(s) 127, 1336
FalI AAGNNNNNCTT 2 cut(s) 878, 910
FaqI GGGAC 1 cut(s) 265
FauI CCCGC 3 cut(s) 242, 640, 1706
Fnu4HI GCNGC 5 cut(s) 317, 370, 636, 639, 869
FriOI GRGCYC 3 cut(s) 271, 1139, 1283
Fsp4HI GCNGC 5 cut(s) 317, 370, 636, 639, 869
FspBI CTAG 7 cut(s) 141, 618, 792, 1076, 1092, 1097, 1251
FspI TGCGCA 1 cut(s) 1216
GlaI GCGC 3 cut(s) 139, 979, 1216
GluI GCNGC 5 cut(s) 317, 370, 636, 639, 869
GsuI CTGGAG 1 cut(s) 138
HaeII RGCGCY 1 cut(s) 141
HaeIII GGCC 6 cut(s) 327, 489, 536, 560, 759, 850
HapII CCGG 2 cut(s) 203, 1746
HgaI GACGC 1 cut(s) 428
HhaI GCGC 3 cut(s) 140, 980, 1217
Hin1I GRCGYC 2 cut(s) 5, 420
Hin6I GCGC 3 cut(s) 138, 978, 1215
HinP1I GCGC 3 cut(s) 138, 978, 1215
HincII GTYRAC 1 cut(s) 1291
HindII GTYRAC 1 cut(s) 1291
HpaI GTTAAC 1 cut(s) 1291
HpaII CCGG 2 cut(s) 203, 1746
HphI GGTGA 2 cut(s) 1004, 1121
Hpy166II GTNNAC 5 cut(s) 1291, 1320, 1356, 1393, 1573
Hpy8I GTNNAC 5 cut(s) 1291, 1320, 1356, 1393, 1573
HpyAV CCTTC 6 cut(s) 572, 829, 1023, 1223, 1421, 1702
HpyCH4III ACNGT 2 cut(s) 196, 601
HpyCH4IV ACGT 3 cut(s) 667, 1776, 1790
HpyF10VI GCNNNNNNNGC 5 cut(s) 100, 137, 557, 635, 690
HpyF3I CTNAG 7 cut(s) 387, 454, 519, 576, 1050, 1196, 1604
HpySE526I ACGT 3 cut(s) 667, 1776, 1790
Hsp92I GRCGYC 2 cut(s) 5, 420
HspAI GCGC 3 cut(s) 138, 978, 1215
Kpn2I TCCGGA 2 cut(s) 202, 1745
KpnI GGTACC 1 cut(s) 663
KspAI GTTAAC 1 cut(s) 1291
KspI CCGCGG 1 cut(s) 370
Kzo9I GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
LmnI GCTCC 4 cut(s) 445, 634, 1134, 1278
Lsp1109I GCAGC 4 cut(s) 328, 622, 625, 855
LweI GCATC 4 cut(s) 81, 1468, 1602, 1647
MaeI CTAG 7 cut(s) 141, 618, 792, 1076, 1092, 1097, 1251
MaeII ACGT 3 cut(s) 667, 1776, 1790
MaeIII GTNAC 2 cut(s) 1559, 1633
MalI GATC 8 cut(s) 258, 262, 525, 622, 1348, 1641, 1698, 1833
MbiI CCGCTC 1 cut(s) 580
MboI GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
MflI RGATCY 3 cut(s) 620, 1639, 1696
MhlI GDGCHC 4 cut(s) 271, 442, 1139, 1283
MlsI TGGCCA 1 cut(s) 489
MluNI TGGCCA 1 cut(s) 489
MlyI GAGTC 3 cut(s) 368, 446, 1623
MmeI TCCRAC 3 cut(s) 33, 51, 60
Mox20I TGGCCA 1 cut(s) 489
Mph1103I ATGCAT 2 cut(s) 496, 1667
MroI TCCGGA 2 cut(s) 202, 1745
MroXI GAANNNNTTC 1 cut(s) 1738
MscI TGGCCA 1 cut(s) 489
MseI TTAA 8 cut(s) 51, 722, 1020, 1026, 1082, 1188, 1290, 1680
MslI CAYNNNNRTG 3 cut(s) 495, 970, 1568
Msp20I TGGCCA 1 cut(s) 489
MspA1I CMGCKG 2 cut(s) 369, 635
MspCI CTTAAG 1 cut(s) 1025
MspI CCGG 2 cut(s) 203, 1746
MspR9I CCNGG 2 cut(s) 657, 1140
Mva1269I GAATGC 2 cut(s) 693, 1665
MvaI CCWGG 2 cut(s) 657, 1140
MvnI CGCG 1 cut(s) 369
MwoI GCNNNNNNNGC 5 cut(s) 100, 137, 557, 635, 690
NcoI CCATGG 1 cut(s) 507
NdeII GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
NheI GCTAGC 1 cut(s) 140
NlaIV GGNNCC 4 cut(s) 535, 661, 1136, 1280
NmuCI GTSAC 1 cut(s) 1633
NsbI TGCGCA 1 cut(s) 1216
NsiI ATGCAT 2 cut(s) 496, 1667
NspI RCATGY 2 cut(s) 498, 1829
NspV TTCGAA 1 cut(s) 1425
PasI CCCWGGG 1 cut(s) 1139
PcsI WCGNNNNNNNCGW 1 cut(s) 649
PctI GAATGC 2 cut(s) 693, 1665
PdmI GAANNNNTTC 1 cut(s) 1738
PfeI GAWTC 8 cut(s) 115, 199, 220, 1043, 1463, 1549, 1672, 1739
PkrI GCNGC 5 cut(s) 318, 371, 637, 640, 870
PleI GAGTC 3 cut(s) 368, 446, 1623
PpsI GAGTC 3 cut(s) 368, 446, 1623
Ppu21I YACGTR 3 cut(s) 668, 1777, 1791
PshBI ATTAAT 1 cut(s) 1680
Psp124BI GAGCTC 1 cut(s) 271
Psp6I CCWGG 2 cut(s) 655, 1138
PspGI CCWGG 2 cut(s) 655, 1138
PspN4I GGNNCC 4 cut(s) 535, 661, 1136, 1280
PspPI GGNCC 4 cut(s) 288, 534, 559, 1600
PsuI RGATCY 3 cut(s) 620, 1639, 1696
RsaI GTAC 5 cut(s) 661, 712, 1266, 1321, 1355
RsaNI GTAC 5 cut(s) 660, 711, 1265, 1320, 1354
RseI CAYNNNNRTG 3 cut(s) 495, 970, 1568
SacI GAGCTC 1 cut(s) 271
SacII CCGCGG 1 cut(s) 370
SaqAI TTAA 8 cut(s) 51, 722, 1020, 1026, 1082, 1188, 1290, 1680
SatI GCNGC 5 cut(s) 317, 370, 636, 639, 869
Sau3AI GATC 8 cut(s) 256, 260, 523, 620, 1346, 1639, 1696, 1831
Sau96I GGNCC 4 cut(s) 288, 534, 559, 1600
ScaI AGTACT 2 cut(s) 712, 1266
SchI GAGTC 3 cut(s) 368, 446, 1623
ScrFI CCNGG 2 cut(s) 657, 1140
SduI GDGCHC 4 cut(s) 271, 442, 1139, 1283
SfaNI GCATC 4 cut(s) 81, 1468, 1602, 1647
SfcI CTRYAG 2 cut(s) 685, 1149
Sfr303I CCGCGG 1 cut(s) 370
SfuI TTCGAA 1 cut(s) 1425
SgrBI CCGCGG 1 cut(s) 370
SinI GGWCC 2 cut(s) 288, 1600
SmiMI CAYNNNNRTG 3 cut(s) 495, 970, 1568
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
SnaBI TACGTA 1 cut(s) 1791
SsiI CCGC 9 cut(s) 249, 367, 369, 580, 633, 648, 1107, 1713, 1829
SspMI CTAG 7 cut(s) 141, 618, 792, 1076, 1092, 1097, 1251
SstI GAGCTC 1 cut(s) 271
StyD4I CCNGG 2 cut(s) 655, 1138
StyI CCWWGG 2 cut(s) 507, 1130
TaaI ACNGT 2 cut(s) 196, 601
TaiI ACGT 3 cut(s) 670, 1779, 1793
TaqI TCGA 4 cut(s) 259, 833, 1425, 1466
TaqII GACCGA 1 cut(s) 386
TatI WGTACW 4 cut(s) 710, 1264, 1319, 1353
TauI GCSGC 1 cut(s) 372
TfiI GAWTC 8 cut(s) 115, 199, 220, 1043, 1463, 1549, 1672, 1739
Tru1I TTAA 8 cut(s) 51, 722, 1020, 1026, 1082, 1188, 1290, 1680
Tru9I TTAA 8 cut(s) 51, 722, 1020, 1026, 1082, 1188, 1290, 1680
TscAI CASTG 7 cut(s) 328, 352, 553, 577, 613, 631, 1054
TseFI GTSAC 1 cut(s) 1633
TseI GCWGC 4 cut(s) 316, 635, 638, 868
Tsp45I GTSAC 1 cut(s) 1633
TspDTI ATGAA 8 cut(s) 371, 757, 1218, 1223, 1362, 1523, 1569, 1791
TspRI CASTG 7 cut(s) 328, 352, 553, 577, 613, 631, 1054
Vha464I CTTAAG 1 cut(s) 1025
VpaK11BI GGWCC 2 cut(s) 288, 1600
VspI ATTAAT 1 cut(s) 1680
XapI RAATTY 4 cut(s) 1123, 1312, 1726, 1798
XbaI TCTAGA 1 cut(s) 1096
XceI RCATGY 2 cut(s) 498, 1829
XcmI CCANNNNNNNNNTGG 1 cut(s) 822
XmnI GAANNNNTTC 1 cut(s) 1738
XspI CTAG 7 cut(s) 141, 618, 792, 1076, 1092, 1097, 1251
ZrmI AGTACT 2 cut(s) 712, 1266
Zsp2I ATGCAT 2 cut(s) 496, 1667
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.